Guide to the Human Genome
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Name: PCYOX1L Sequence: fasta or formatted (494aa) NCBI GI: 226442763
Description:

prenylcysteine oxidase 1 like

Referenced in:

Prenylation and Related Modifications

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.7         53           5
 C cysteine            0.6          3           1
 D aspartate           3.8         19           2
 E glutamate           4.5         22           2
 F phenylalanine       5.9         29           2
 G glycine             7.1         35           2
 H histidine           3.6         18           1
 I isoleucine          3.2         16           1
 K lysine              3.8         19           1
 L leucine            11.1         55           2
 M methionine          2.2         11           1
 N asparagine          3.2         16           1
 P proline             4.0         20           2
 Q glutamine           4.9         24           2
 R arginine            4.0         20           2
 S serine              8.1         40           3
 T threonine           4.7         23           2
 V valine              8.5         42           2
 W tryptophan          1.8          9           2
 Y tyrosine            4.0         20           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   prenylcysteine oxidase 1 like 
PCYOX1                0.388   prenylcysteine oxidase 1 
GPD1L                 0.010   glycerol-3-phosphate dehydrogenase 1-like 
GPD1                  0.009   glycerol-3-phosphate dehydrogenase 1 (soluble) [Homo...
KDM1                  0.007   amine oxidase (flavin containing) domain 2 isoform a...
KDM1                  0.007   amine oxidase (flavin containing) domain 2 isoform b...
FDXR                  0.007   ferredoxin reductase isoform 2 precursor 
FDXR                  0.007   ferredoxin reductase isoform 1 precursor 
SMOX                  0.007   spermine oxidase isoform 4 
SMOX                  0.007   spermine oxidase isoform 3 
SMOX                  0.007   spermine oxidase isoform 2 
SMOX                  0.007   spermine oxidase isoform 1 
FUSSEL18              0.006   PREDICTED: functional smad suppressing element 18 [...
FUSSEL18              0.006   PREDICTED: functional smad suppressing element 18 [...
FUSSEL18              0.006   PREDICTED: functional smad suppressing element 18 [...
C7orf51               0.006   hypothetical protein FLJ37538 
UBASH3A               0.005   ubiquitin associated and SH3 domain containing, A sh...
UBASH3A               0.005   ubiquitin associated and SH3 domain containing, A lon...
FOXD1                 0.005   forkhead box D1 
L1CAM                 0.005   L1 cell adhesion molecule isoform 3 precursor [Homo...
L1CAM                 0.005   L1 cell adhesion molecule isoform 2 precursor 
L1CAM                 0.005   L1 cell adhesion molecule isoform 1 precursor 
DNAH10                0.004   dynein, axonemal, heavy chain 10 
FOXL2                 0.004   forkhead box L2 
KMO                   0.004   kynurenine 3-monooxygenase 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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