Search of human proteins with 27894310

Search of human proteins with 27894310

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|27894310 interleukin 1 family, member 5 [Homo sapiens]
         (155 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|27894310 interleukin 1 family, member 5 [Homo sapiens]             321   1e-88
gi|6912432 interleukin 1 family, member 5 [Homo sapiens]              321   1e-88
gi|27894321 interleukin 1 receptor antagonist isoform 4 [Homo sa...   123   6e-29
gi|27894319 interleukin 1 receptor antagonist isoform 1 precurso...   123   6e-29
gi|27894317 interleukin 1 receptor antagonist isoform 2 [Homo sa...   123   6e-29
gi|10835147 interleukin 1 receptor antagonist isoform 3 [Homo sa...   123   6e-29
gi|27894307 interleukin 1 family, member 10 [Homo sapiens]            109   1e-24
gi|27894304 interleukin 1 family, member 10 [Homo sapiens]            109   1e-24
gi|27894313 interleukin 1 family, member 8 isoform 2 [Homo sapiens]    77   8e-15
gi|7657092 interleukin 1 family, member 6 (epsilon) [Homo sapiens]     74   5e-14
gi|9665234 interleukin 1 family, member 9 [Homo sapiens]               70   9e-13
gi|27894296 interleukin 1 family, member 7 isoform 2 [Homo sapiens]    67   8e-12
gi|20127524 interleukin 1 family, member 7 isoform 1 proprotein ...    67   8e-12
gi|27894302 interleukin 1 family, member 7 isoform 5 [Homo sapiens]    67   8e-12
gi|27894300 interleukin 1 family, member 7 isoform 4 [Homo sapiens]    64   4e-11
gi|27894298 interleukin 1 family, member 7 isoform 3 [Homo sapiens]    64   4e-11
gi|10835145 interleukin 1, beta proprotein [Homo sapiens]              46   1e-05
gi|222537761 hypothetical protein LOC387763 [Homo sapiens]             28   4.1  
gi|14591902 RecQ protein-like [Homo sapiens]                           28   4.1  
gi|14591904 RecQ protein-like [Homo sapiens]                           28   4.1  
gi|169203189 PREDICTED: hypothetical protein LOC338667 [Homo sap...    27   7.0  
gi|169203683 PREDICTED: hypothetical protein LOC338667 [Homo sap...    27   7.0  
gi|169202109 PREDICTED: hypothetical protein LOC338667 [Homo sap...    27   7.0  
gi|66346674 vacuolar protein sorting 13A isoform A [Homo sapiens]      27   7.0  
gi|66346672 vacuolar protein sorting 13A isoform C [Homo sapiens]      27   7.0  
gi|31881792 leukotriene B4 receptor [Homo sapiens]                     27   9.2  
gi|221218998 leukotriene B4 receptor [Homo sapiens]                    27   9.2  

>gi|27894310 interleukin 1 family, member 5 [Homo sapiens]
          Length = 155

 Score =  321 bits (823), Expect = 1e-88
 Identities = 155/155 (100%), Positives = 155/155 (100%)

Query: 1   MVLSGALCFRMKDSALKVLYLHNNQLLAGGLHAGKVIKGEEISVVPNRWLDASLSPVILG 60
           MVLSGALCFRMKDSALKVLYLHNNQLLAGGLHAGKVIKGEEISVVPNRWLDASLSPVILG
Sbjct: 1   MVLSGALCFRMKDSALKVLYLHNNQLLAGGLHAGKVIKGEEISVVPNRWLDASLSPVILG 60

Query: 61  VQGGSQCLSCGVGQEPTLTLEPVNIMELYLGAKESKSFTFYRRDMGLTSSFESAAYPGWF 120
           VQGGSQCLSCGVGQEPTLTLEPVNIMELYLGAKESKSFTFYRRDMGLTSSFESAAYPGWF
Sbjct: 61  VQGGSQCLSCGVGQEPTLTLEPVNIMELYLGAKESKSFTFYRRDMGLTSSFESAAYPGWF 120

Query: 121 LCTVPEADQPVRLTQLPENGGWNAPITDFYFQQCD 155
           LCTVPEADQPVRLTQLPENGGWNAPITDFYFQQCD
Sbjct: 121 LCTVPEADQPVRLTQLPENGGWNAPITDFYFQQCD 155


>gi|6912432 interleukin 1 family, member 5 [Homo sapiens]
          Length = 155

 Score =  321 bits (823), Expect = 1e-88
 Identities = 155/155 (100%), Positives = 155/155 (100%)

Query: 1   MVLSGALCFRMKDSALKVLYLHNNQLLAGGLHAGKVIKGEEISVVPNRWLDASLSPVILG 60
           MVLSGALCFRMKDSALKVLYLHNNQLLAGGLHAGKVIKGEEISVVPNRWLDASLSPVILG
Sbjct: 1   MVLSGALCFRMKDSALKVLYLHNNQLLAGGLHAGKVIKGEEISVVPNRWLDASLSPVILG 60

Query: 61  VQGGSQCLSCGVGQEPTLTLEPVNIMELYLGAKESKSFTFYRRDMGLTSSFESAAYPGWF 120
           VQGGSQCLSCGVGQEPTLTLEPVNIMELYLGAKESKSFTFYRRDMGLTSSFESAAYPGWF
Sbjct: 61  VQGGSQCLSCGVGQEPTLTLEPVNIMELYLGAKESKSFTFYRRDMGLTSSFESAAYPGWF 120

Query: 121 LCTVPEADQPVRLTQLPENGGWNAPITDFYFQQCD 155
           LCTVPEADQPVRLTQLPENGGWNAPITDFYFQQCD
Sbjct: 121 LCTVPEADQPVRLTQLPENGGWNAPITDFYFQQCD 155


>gi|27894321 interleukin 1 receptor antagonist isoform 4 [Homo
           sapiens]
          Length = 143

 Score =  123 bits (309), Expect = 6e-29
 Identities = 73/148 (49%), Positives = 86/148 (58%), Gaps = 13/148 (8%)

Query: 9   FRMKDSALKVLYLHNNQLLAGGLHAGKVIKGEEISVVPNRWLDASLSP--VILGVQGGSQ 66
           FR+ D   K  YL NNQL+AG L    V   E+I VVP       + P  + LG+ GG  
Sbjct: 4   FRIWDVNQKTFYLRNNQLVAGYLQGPNVNLEEKIDVVP-------IEPHALFLGIHGGKM 56

Query: 67  CLSC-GVGQEPTLTLEPVNIMELYLGAKESKSFTFYRRDMGLTSSFESAAYPGWFLCTVP 125
           CLSC   G E  L LE VNI +L    K+ K F F R D G T+SFESAA PGWFLCT  
Sbjct: 57  CLSCVKSGDETRLQLEAVNITDLSENRKQDKRFAFIRSDSGPTTSFESAACPGWFLCTAM 116

Query: 126 EADQPVRLTQLPENGGWNAPITDFYFQQ 153
           EADQPV LT +P+ G     +T FYFQ+
Sbjct: 117 EADQPVSLTNMPDEG---VMVTKFYFQE 141


>gi|27894319 interleukin 1 receptor antagonist isoform 1 precursor
           [Homo sapiens]
          Length = 177

 Score =  123 bits (309), Expect = 6e-29
 Identities = 73/148 (49%), Positives = 86/148 (58%), Gaps = 13/148 (8%)

Query: 9   FRMKDSALKVLYLHNNQLLAGGLHAGKVIKGEEISVVPNRWLDASLSP--VILGVQGGSQ 66
           FR+ D   K  YL NNQL+AG L    V   E+I VVP       + P  + LG+ GG  
Sbjct: 38  FRIWDVNQKTFYLRNNQLVAGYLQGPNVNLEEKIDVVP-------IEPHALFLGIHGGKM 90

Query: 67  CLSC-GVGQEPTLTLEPVNIMELYLGAKESKSFTFYRRDMGLTSSFESAAYPGWFLCTVP 125
           CLSC   G E  L LE VNI +L    K+ K F F R D G T+SFESAA PGWFLCT  
Sbjct: 91  CLSCVKSGDETRLQLEAVNITDLSENRKQDKRFAFIRSDSGPTTSFESAACPGWFLCTAM 150

Query: 126 EADQPVRLTQLPENGGWNAPITDFYFQQ 153
           EADQPV LT +P+ G     +T FYFQ+
Sbjct: 151 EADQPVSLTNMPDEG---VMVTKFYFQE 175


>gi|27894317 interleukin 1 receptor antagonist isoform 2 [Homo
           sapiens]
          Length = 180

 Score =  123 bits (309), Expect = 6e-29
 Identities = 73/148 (49%), Positives = 86/148 (58%), Gaps = 13/148 (8%)

Query: 9   FRMKDSALKVLYLHNNQLLAGGLHAGKVIKGEEISVVPNRWLDASLSP--VILGVQGGSQ 66
           FR+ D   K  YL NNQL+AG L    V   E+I VVP       + P  + LG+ GG  
Sbjct: 41  FRIWDVNQKTFYLRNNQLVAGYLQGPNVNLEEKIDVVP-------IEPHALFLGIHGGKM 93

Query: 67  CLSC-GVGQEPTLTLEPVNIMELYLGAKESKSFTFYRRDMGLTSSFESAAYPGWFLCTVP 125
           CLSC   G E  L LE VNI +L    K+ K F F R D G T+SFESAA PGWFLCT  
Sbjct: 94  CLSCVKSGDETRLQLEAVNITDLSENRKQDKRFAFIRSDSGPTTSFESAACPGWFLCTAM 153

Query: 126 EADQPVRLTQLPENGGWNAPITDFYFQQ 153
           EADQPV LT +P+ G     +T FYFQ+
Sbjct: 154 EADQPVSLTNMPDEG---VMVTKFYFQE 178


>gi|10835147 interleukin 1 receptor antagonist isoform 3 [Homo
           sapiens]
          Length = 159

 Score =  123 bits (309), Expect = 6e-29
 Identities = 73/148 (49%), Positives = 86/148 (58%), Gaps = 13/148 (8%)

Query: 9   FRMKDSALKVLYLHNNQLLAGGLHAGKVIKGEEISVVPNRWLDASLSP--VILGVQGGSQ 66
           FR+ D   K  YL NNQL+AG L    V   E+I VVP       + P  + LG+ GG  
Sbjct: 20  FRIWDVNQKTFYLRNNQLVAGYLQGPNVNLEEKIDVVP-------IEPHALFLGIHGGKM 72

Query: 67  CLSC-GVGQEPTLTLEPVNIMELYLGAKESKSFTFYRRDMGLTSSFESAAYPGWFLCTVP 125
           CLSC   G E  L LE VNI +L    K+ K F F R D G T+SFESAA PGWFLCT  
Sbjct: 73  CLSCVKSGDETRLQLEAVNITDLSENRKQDKRFAFIRSDSGPTTSFESAACPGWFLCTAM 132

Query: 126 EADQPVRLTQLPENGGWNAPITDFYFQQ 153
           EADQPV LT +P+ G     +T FYFQ+
Sbjct: 133 EADQPVSLTNMPDEG---VMVTKFYFQE 157


>gi|27894307 interleukin 1 family, member 10 [Homo sapiens]
          Length = 152

 Score =  109 bits (272), Expect = 1e-24
 Identities = 62/138 (44%), Positives = 83/138 (60%), Gaps = 6/138 (4%)

Query: 17  KVLYLHNNQLLAGGLHAGKVIKGEEISVVPNRWLDASLSPVILGVQGGSQCLSCGVGQE- 75
           K LY  + QLL G   A      E+I ++PNR L  +  P+ LG+QGGS+CL+C   +E 
Sbjct: 18  KALYTRDGQLLVGDPVADNCC-AEKICILPNRGLARTKVPIFLGIQGGSRCLACVETEEG 76

Query: 76  PTLTLEPVNIMELYLGAKESKSFTFYRRDMGLTSSFESAAYPGWFLCTVPEADQPVRLTQ 135
           P+L LE VNI ELY G +E+  FTF++   G     E+AA+PGWFLC   E  QPV+LT+
Sbjct: 77  PSLQLEDVNIEELYKGGEEATRFTFFQSSSGSAFRLEAAAWPGWFLCGPAEPQQPVQLTK 136

Query: 136 LPENGGWNAPITDFYFQQ 153
             E     +  T FYF+Q
Sbjct: 137 ESE----PSARTKFYFEQ 150


>gi|27894304 interleukin 1 family, member 10 [Homo sapiens]
          Length = 152

 Score =  109 bits (272), Expect = 1e-24
 Identities = 62/138 (44%), Positives = 83/138 (60%), Gaps = 6/138 (4%)

Query: 17  KVLYLHNNQLLAGGLHAGKVIKGEEISVVPNRWLDASLSPVILGVQGGSQCLSCGVGQE- 75
           K LY  + QLL G   A      E+I ++PNR L  +  P+ LG+QGGS+CL+C   +E 
Sbjct: 18  KALYTRDGQLLVGDPVADNCC-AEKICILPNRGLARTKVPIFLGIQGGSRCLACVETEEG 76

Query: 76  PTLTLEPVNIMELYLGAKESKSFTFYRRDMGLTSSFESAAYPGWFLCTVPEADQPVRLTQ 135
           P+L LE VNI ELY G +E+  FTF++   G     E+AA+PGWFLC   E  QPV+LT+
Sbjct: 77  PSLQLEDVNIEELYKGGEEATRFTFFQSSSGSAFRLEAAAWPGWFLCGPAEPQQPVQLTK 136

Query: 136 LPENGGWNAPITDFYFQQ 153
             E     +  T FYF+Q
Sbjct: 137 ESE----PSARTKFYFEQ 150


>gi|27894313 interleukin 1 family, member 8 isoform 2 [Homo sapiens]
          Length = 157

 Score = 76.6 bits (187), Expect = 8e-15
 Identities = 54/152 (35%), Positives = 78/152 (51%), Gaps = 11/152 (7%)

Query: 9   FRMKDSALKVLYLHNNQLLAGGLHAGKVIKGEEISVVPNRWLDASLSP----VILGVQGG 64
           + ++DS   V  L  N L+A  L   + IK   + ++  R  + S       V LG++G 
Sbjct: 12  YAIRDSRQMVWVLSGNSLIAAPL--SRSIKPVTLHLIACRDTEFSDKEKGNMVYLGIKGK 69

Query: 65  SQCLSCGVGQ-EPTLTLEPVNIMELYLGAKESKSFTFYRRDMGLTSSFESAAYPGWFLCT 123
             CL C   Q +PTL L+  NIM+LY+  K  K F F+    G TS F+S +YPGWF+ T
Sbjct: 70  DLCLFCAEIQGKPTLQLKEKNIMDLYVEKKAQKPFLFFHNKEGSTSVFQSVSYPGWFIAT 129

Query: 124 VPEADQPVRLTQLPENGGWNAPITDFYFQQCD 155
              + QP+ LT+  E G  N   T+FY    +
Sbjct: 130 STTSGQPIFLTK--ERGITNN--TNFYLDSVE 157


>gi|7657092 interleukin 1 family, member 6 (epsilon) [Homo sapiens]
          Length = 158

 Score = 73.9 bits (180), Expect = 5e-14
 Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 1/82 (1%)

Query: 55  SPVILGVQGGSQCLSCG-VGQEPTLTLEPVNIMELYLGAKESKSFTFYRRDMGLTSSFES 113
           +P+ LG+ G + CL C  VG +PTL L+  +IM+LY   +  KSF FY    G  S+FES
Sbjct: 61  NPIYLGLNGLNLCLMCAKVGDQPTLQLKEKDIMDLYNQPEPVKSFLFYHSQSGRNSTFES 120

Query: 114 AAYPGWFLCTVPEADQPVRLTQ 135
            A+PGWF+    E   P+ LTQ
Sbjct: 121 VAFPGWFIAVSSEGGCPLILTQ 142


>gi|9665234 interleukin 1 family, member 9 [Homo sapiens]
          Length = 169

 Score = 69.7 bits (169), Expect = 9e-13
 Identities = 36/80 (45%), Positives = 49/80 (61%), Gaps = 2/80 (2%)

Query: 56  PVILGVQGGSQCLSCG-VGQEPTLTLEPVNIMELYLGAKESKSFTFYRRDMGLTSSFESA 114
           P+ LG+Q    CL C  VG++PTL L+   IM+LY   +  K F FYR   G TS+ ES 
Sbjct: 74  PIYLGIQNPEMCLYCEKVGEQPTLQLKEQKIMDLYGQPEPVKPFLFYRAKTGRTSTLESV 133

Query: 115 AYPGWFLCTVPEADQPVRLT 134
           A+P WF+ +  + DQP+ LT
Sbjct: 134 AFPDWFIAS-SKRDQPIILT 152


>gi|27894296 interleukin 1 family, member 7 isoform 2 [Homo sapiens]
          Length = 197

 Score = 66.6 bits (161), Expect = 8e-12
 Identities = 49/139 (35%), Positives = 71/139 (51%), Gaps = 11/139 (7%)

Query: 9   FRMKDSALKVLYLHNNQLLAGGLHAGKVIKGEEISVVPNRWLDASL---SPVILGVQGGS 65
           F + D   KVL L +  L+A  +     I+ E    + +    AS    SP++LGV  G 
Sbjct: 39  FSIHDQDHKVLVLDSGNLIA--VPDKNYIRPEIFFALASSLSSASAEKGSPILLGVSKGE 96

Query: 66  QCLSCGVGQ---EPTLTLEPVNIMELYLGAKES--KSFTFYRRDMGLTSSFESAAYPGWF 120
            CL C   +    P+L L+   +M+L    KES  + F FYR  +G  +  ESAA+PGWF
Sbjct: 97  FCLYCDKDKGQSHPSLQLKKEKLMKL-AAQKESARRPFIFYRAQVGSWNMLESAAHPGWF 155

Query: 121 LCTVPEADQPVRLTQLPEN 139
           +CT    ++PV +T   EN
Sbjct: 156 ICTSCNCNEPVGVTDKFEN 174


>gi|20127524 interleukin 1 family, member 7 isoform 1 proprotein
           [Homo sapiens]
          Length = 218

 Score = 66.6 bits (161), Expect = 8e-12
 Identities = 49/139 (35%), Positives = 71/139 (51%), Gaps = 11/139 (7%)

Query: 9   FRMKDSALKVLYLHNNQLLAGGLHAGKVIKGEEISVVPNRWLDASL---SPVILGVQGGS 65
           F + D   KVL L +  L+A  +     I+ E    + +    AS    SP++LGV  G 
Sbjct: 60  FSIHDQDHKVLVLDSGNLIA--VPDKNYIRPEIFFALASSLSSASAEKGSPILLGVSKGE 117

Query: 66  QCLSCGVGQ---EPTLTLEPVNIMELYLGAKES--KSFTFYRRDMGLTSSFESAAYPGWF 120
            CL C   +    P+L L+   +M+L    KES  + F FYR  +G  +  ESAA+PGWF
Sbjct: 118 FCLYCDKDKGQSHPSLQLKKEKLMKL-AAQKESARRPFIFYRAQVGSWNMLESAAHPGWF 176

Query: 121 LCTVPEADQPVRLTQLPEN 139
           +CT    ++PV +T   EN
Sbjct: 177 ICTSCNCNEPVGVTDKFEN 195


>gi|27894302 interleukin 1 family, member 7 isoform 5 [Homo sapiens]
          Length = 192

 Score = 66.6 bits (161), Expect = 8e-12
 Identities = 49/139 (35%), Positives = 71/139 (51%), Gaps = 11/139 (7%)

Query: 9   FRMKDSALKVLYLHNNQLLAGGLHAGKVIKGEEISVVPNRWLDASL---SPVILGVQGGS 65
           F + D   KVL L +  L+A  +     I+ E    + +    AS    SP++LGV  G 
Sbjct: 34  FSIHDQDHKVLVLDSGNLIA--VPDKNYIRPEIFFALASSLSSASAEKGSPILLGVSKGE 91

Query: 66  QCLSCGVGQ---EPTLTLEPVNIMELYLGAKES--KSFTFYRRDMGLTSSFESAAYPGWF 120
            CL C   +    P+L L+   +M+L    KES  + F FYR  +G  +  ESAA+PGWF
Sbjct: 92  FCLYCDKDKGQSHPSLQLKKEKLMKL-AAQKESARRPFIFYRAQVGSWNMLESAAHPGWF 150

Query: 121 LCTVPEADQPVRLTQLPEN 139
           +CT    ++PV +T   EN
Sbjct: 151 ICTSCNCNEPVGVTDKFEN 169


>gi|27894300 interleukin 1 family, member 7 isoform 4 [Homo sapiens]
          Length = 178

 Score = 64.3 bits (155), Expect = 4e-11
 Identities = 37/90 (41%), Positives = 52/90 (57%), Gaps = 6/90 (6%)

Query: 55  SPVILGVQGGSQCLSCGVGQ---EPTLTLEPVNIMELYLGAKES--KSFTFYRRDMGLTS 109
           SP++LGV  G  CL C   +    P+L L+   +M+L    KES  + F FYR  +G  +
Sbjct: 67  SPILLGVSKGEFCLYCDKDKGQSHPSLQLKKEKLMKL-AAQKESARRPFIFYRAQVGSWN 125

Query: 110 SFESAAYPGWFLCTVPEADQPVRLTQLPEN 139
             ESAA+PGWF+CT    ++PV +T   EN
Sbjct: 126 MLESAAHPGWFICTSCNCNEPVGVTDKFEN 155


>gi|27894298 interleukin 1 family, member 7 isoform 3 [Homo sapiens]
          Length = 157

 Score = 64.3 bits (155), Expect = 4e-11
 Identities = 37/90 (41%), Positives = 52/90 (57%), Gaps = 6/90 (6%)

Query: 55  SPVILGVQGGSQCLSCGVGQ---EPTLTLEPVNIMELYLGAKES--KSFTFYRRDMGLTS 109
           SP++LGV  G  CL C   +    P+L L+   +M+L    KES  + F FYR  +G  +
Sbjct: 46  SPILLGVSKGEFCLYCDKDKGQSHPSLQLKKEKLMKL-AAQKESARRPFIFYRAQVGSWN 104

Query: 110 SFESAAYPGWFLCTVPEADQPVRLTQLPEN 139
             ESAA+PGWF+CT    ++PV +T   EN
Sbjct: 105 MLESAAHPGWFICTSCNCNEPVGVTDKFEN 134


>gi|10835145 interleukin 1, beta proprotein [Homo sapiens]
          Length = 269

 Score = 46.2 bits (108), Expect = 1e-05
 Identities = 42/138 (30%), Positives = 63/138 (45%), Gaps = 15/138 (10%)

Query: 16  LKVLYLHNNQLLAGGLHAGKVIKGEEISVVPNRWLDASLSPVILGVQGGSQCLSCGVGQE 75
           LK L+L    +    + +   ++GEE +            PV LG++  +  LSC +  +
Sbjct: 142 LKALHLQGQDMEQQVVFSMSFVQGEESN---------DKIPVALGLKEKNLYLSCVLKDD 192

Query: 76  -PTLTLEPVNIMELYLGAKESKSFTFYRRDMGLTSSFESAAYPGWFLCTVPEADQPVRLT 134
            PTL LE V+    Y   K  K F F + ++     FESA +P W++ T    + PV L 
Sbjct: 193 KPTLQLESVDPKN-YPKKKMEKRFVFNKIEINNKLEFESAQFPNWYISTSQAENMPVFLG 251

Query: 135 QLPENGGWNAPITDFYFQ 152
                GG +  ITDF  Q
Sbjct: 252 --GTKGGQD--ITDFTMQ 265


>gi|222537761 hypothetical protein LOC387763 [Homo sapiens]
          Length = 122

 Score = 27.7 bits (60), Expect = 4.1
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 2/37 (5%)

Query: 105 MGLTSSFESAAYPGWFLCTVPEADQPVRLTQLPENGG 141
           MG+ SS++  A    F+C   E  QPVR  +LP+  G
Sbjct: 9   MGICSSYQ--AVMPHFVCLADEFPQPVRPAKLPKGRG 43


>gi|14591902 RecQ protein-like [Homo sapiens]
          Length = 649

 Score = 27.7 bits (60), Expect = 4.1
 Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 2/57 (3%)

Query: 8   CFRMKDSALKVLYLHNNQLLAGGLHAGKVIKGEEISVVPNRWLDASLSPVILGVQGG 64
           CF  KDS    + L N  + AG  HA   ++ E+ + V  +W    +  V+  V  G
Sbjct: 321 CFSQKDSEQVTVSLQNLGIHAGAYHAN--LEPEDKTTVHRKWSANEIQVVVATVAFG 375


>gi|14591904 RecQ protein-like [Homo sapiens]
          Length = 649

 Score = 27.7 bits (60), Expect = 4.1
 Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 2/57 (3%)

Query: 8   CFRMKDSALKVLYLHNNQLLAGGLHAGKVIKGEEISVVPNRWLDASLSPVILGVQGG 64
           CF  KDS    + L N  + AG  HA   ++ E+ + V  +W    +  V+  V  G
Sbjct: 321 CFSQKDSEQVTVSLQNLGIHAGAYHAN--LEPEDKTTVHRKWSANEIQVVVATVAFG 375


>gi|169203189 PREDICTED: hypothetical protein LOC338667 [Homo
          sapiens]
          Length = 859

 Score = 26.9 bits (58), Expect = 7.0
 Identities = 12/23 (52%), Positives = 15/23 (65%)

Query: 58 ILGVQGGSQCLSCGVGQEPTLTL 80
          + GV+GGS  L+CG G  P L L
Sbjct: 44 VQGVRGGSVELACGSGPAPLLVL 66


>gi|169203683 PREDICTED: hypothetical protein LOC338667 [Homo
          sapiens]
          Length = 859

 Score = 26.9 bits (58), Expect = 7.0
 Identities = 12/23 (52%), Positives = 15/23 (65%)

Query: 58 ILGVQGGSQCLSCGVGQEPTLTL 80
          + GV+GGS  L+CG G  P L L
Sbjct: 44 VQGVRGGSVELACGSGPAPLLVL 66


>gi|169202109 PREDICTED: hypothetical protein LOC338667 [Homo
          sapiens]
          Length = 859

 Score = 26.9 bits (58), Expect = 7.0
 Identities = 12/23 (52%), Positives = 15/23 (65%)

Query: 58 ILGVQGGSQCLSCGVGQEPTLTL 80
          + GV+GGS  L+CG G  P L L
Sbjct: 44 VQGVRGGSVELACGSGPAPLLVL 66


>gi|66346674 vacuolar protein sorting 13A isoform A [Homo sapiens]
          Length = 3174

 Score = 26.9 bits (58), Expect = 7.0
 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 2/54 (3%)

Query: 79   TLEP--VNIMELYLGAKESKSFTFYRRDMGLTSSFESAAYPGWFLCTVPEADQP 130
            T EP  V+   L + AKE     F+ R+ G   +F++     W L  + EA +P
Sbjct: 3117 TKEPFIVHGRRLRIEAKERVKSVFHAREFGKIINFKTPEDARWILTKLQEAREP 3170


>gi|66346672 vacuolar protein sorting 13A isoform C [Homo sapiens]
          Length = 3135

 Score = 26.9 bits (58), Expect = 7.0
 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 2/54 (3%)

Query: 79   TLEP--VNIMELYLGAKESKSFTFYRRDMGLTSSFESAAYPGWFLCTVPEADQP 130
            T EP  V+   L + AKE     F+ R+ G   +F++     W L  + EA +P
Sbjct: 3078 TKEPFIVHGRRLRIEAKERVKSVFHAREFGKIINFKTPEDARWILTKLQEAREP 3131


>gi|31881792 leukotriene B4 receptor [Homo sapiens]
          Length = 352

 Score = 26.6 bits (57), Expect = 9.2
 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 5/49 (10%)

Query: 30  GLHAGKVIKGEEISVVPN-----RWLDASLSPVILGVQGGSQCLSCGVG 73
           G  AG  + G+ +S+  N      +L +S++PV+    GG    S GVG
Sbjct: 251 GQAAGLGLVGKRLSLARNVLIALAFLSSSVNPVLYACAGGGLLRSAGVG 299


>gi|221218998 leukotriene B4 receptor [Homo sapiens]
          Length = 352

 Score = 26.6 bits (57), Expect = 9.2
 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 5/49 (10%)

Query: 30  GLHAGKVIKGEEISVVPN-----RWLDASLSPVILGVQGGSQCLSCGVG 73
           G  AG  + G+ +S+  N      +L +S++PV+    GG    S GVG
Sbjct: 251 GQAAGLGLVGKRLSLARNVLIALAFLSSSVNPVLYACAGGGLLRSAGVG 299


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.137    0.429 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,216,471
Number of Sequences: 37866
Number of extensions: 260762
Number of successful extensions: 574
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 534
Number of HSP's gapped (non-prelim): 30
length of query: 155
length of database: 18,247,518
effective HSP length: 93
effective length of query: 62
effective length of database: 14,725,980
effective search space: 913010760
effective search space used: 913010760
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.