Guide to the Human Genome
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Name: LTB4R Sequence: fasta or formatted (352aa) NCBI GI: 31881792
Description:

leukotriene B4 receptor

Referenced in:

G-Protein-coupled Receptors

Other entries for this name:
alt mRNA [352aa] leukotriene B4 receptor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            13.1         46           2
 C cysteine            1.4          5           1
 D aspartate           0.9          3           1
 E glutamate           2.6          9           1
 F phenylalanine       5.1         18           2
 G glycine             8.2         29           3
 H histidine           1.4          5           1
 I isoleucine          3.1         11           2
 K lysine              2.3          8           1
 L leucine            16.8         59           2
 M methionine          2.0          7           1
 N asparagine          2.6          9           1
 P proline             4.5         16           2
 Q glutamine           1.7          6           1
 R arginine            7.7         27           2
 S serine              9.7         34           3
 T threonine           4.8         17           2
 V valine              8.8         31           2
 W tryptophan          1.4          5           1
 Y tyrosine            2.0          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   leukotriene B4 receptor 
LTB4R                 1.000   leukotriene B4 receptor 
LTB4R2                0.317   leukotriene B4 receptor 2 
SSTR3                 0.194   somatostatin receptor 3 
SSTR5                 0.179   somatostatin receptor 5 
GPR44                 0.170   G protein-coupled receptor 44 
FPR2                  0.168   formyl peptide receptor-like 1 
FPR2                  0.168   formyl peptide receptor-like 1 
SSTR2                 0.168   somatostatin receptor 2 
FPR1                  0.168   formyl peptide receptor 1 
GALR1                 0.167   galanin receptor 1 
MCHR1                 0.164   G protein-coupled receptor 24 
C5AR1                 0.162   complement component 5 receptor 1 
SSTR4                 0.156   somatostatin receptor 4 
FPR3                  0.155   formyl peptide receptor-like 2 
SSTR1                 0.153   somatostatin receptor 1 
CMKLR1                0.152   chemokine-like receptor 1 isoform a 
CMKLR1                0.152   chemokine-like receptor 1 isoform a 
CMKLR1                0.152   chemokine-like receptor 1 isoform a 
CMKLR1                0.152   chemokine-like receptor 1 isoform b 
GPR1                  0.144   G protein-coupled receptor 1 
GPR1                  0.144   G protein-coupled receptor 1 
CXCR3                 0.144   chemokine (C-X-C motif) receptor 3 isoform B 
AGTR1                 0.144   angiotensin II receptor, type 1 
AGTR1                 0.144   angiotensin II receptor, type 1 
AGTR1                 0.144   angiotensin II receptor, type 1 
AGTR1                 0.144   angiotensin II receptor, type 1 
AGTR1                 0.144   angiotensin II receptor, type 1 
CXCR3                 0.144   chemokine (C-X-C motif) receptor 3 isoform A 
OPRK1                 0.144   opioid receptor, kappa 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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