Guide to the Human Genome
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Search of human proteins with 27894307

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|27894307 interleukin 1 family, member 10 [Homo sapiens]
         (152 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|27894307 interleukin 1 family, member 10 [Homo sapiens]            318   1e-87
gi|27894304 interleukin 1 family, member 10 [Homo sapiens]            318   1e-87
gi|27894310 interleukin 1 family, member 5 [Homo sapiens]             109   1e-24
gi|6912432 interleukin 1 family, member 5 [Homo sapiens]              109   1e-24
gi|27894321 interleukin 1 receptor antagonist isoform 4 [Homo sa...    97   7e-21
gi|27894319 interleukin 1 receptor antagonist isoform 1 precurso...    97   7e-21
gi|27894317 interleukin 1 receptor antagonist isoform 2 [Homo sa...    97   7e-21
gi|10835147 interleukin 1 receptor antagonist isoform 3 [Homo sa...    97   7e-21
gi|27894313 interleukin 1 family, member 8 isoform 2 [Homo sapiens]    72   1e-13
gi|9665234 interleukin 1 family, member 9 [Homo sapiens]               70   7e-13
gi|7657092 interleukin 1 family, member 6 (epsilon) [Homo sapiens]     69   2e-12
gi|27894298 interleukin 1 family, member 7 isoform 3 [Homo sapiens]    64   6e-11
gi|27894296 interleukin 1 family, member 7 isoform 2 [Homo sapiens]    61   4e-10
gi|20127524 interleukin 1 family, member 7 isoform 1 proprotein ...    61   4e-10
gi|27894302 interleukin 1 family, member 7 isoform 5 [Homo sapiens]    61   4e-10
gi|27894300 interleukin 1 family, member 7 isoform 4 [Homo sapiens]    61   4e-10
gi|10835145 interleukin 1, beta proprotein [Homo sapiens]              44   4e-05
gi|126091152 cubilin [Homo sapiens]                                    34   0.055
gi|20070252 interleukin 1 family, member 8 isoform 1 [Homo sapiens]    30   0.61 
gi|192449449 ubiquitin-conjugating enzyme E2O [Homo sapiens]           29   1.4  
gi|169160919 PREDICTED: hypothetical protein [Homo sapiens]            28   2.3  
gi|169162159 PREDICTED: hypothetical protein [Homo sapiens]            28   2.3  
gi|169161152 PREDICTED: hypothetical protein [Homo sapiens]            28   2.3  
gi|239755589 PREDICTED: hypothetical protein [Homo sapiens]            27   6.7  

>gi|27894307 interleukin 1 family, member 10 [Homo sapiens]
          Length = 152

 Score =  318 bits (815), Expect = 1e-87
 Identities = 152/152 (100%), Positives = 152/152 (100%)

Query: 1   MCSLPMARYYIIKYADQKALYTRDGQLLVGDPVADNCCAEKICILPNRGLARTKVPIFLG 60
           MCSLPMARYYIIKYADQKALYTRDGQLLVGDPVADNCCAEKICILPNRGLARTKVPIFLG
Sbjct: 1   MCSLPMARYYIIKYADQKALYTRDGQLLVGDPVADNCCAEKICILPNRGLARTKVPIFLG 60

Query: 61  IQGGSRCLACVETEEGPSLQLEDVNIEELYKGGEEATRFTFFQSSSGSAFRLEAAAWPGW 120
           IQGGSRCLACVETEEGPSLQLEDVNIEELYKGGEEATRFTFFQSSSGSAFRLEAAAWPGW
Sbjct: 61  IQGGSRCLACVETEEGPSLQLEDVNIEELYKGGEEATRFTFFQSSSGSAFRLEAAAWPGW 120

Query: 121 FLCGPAEPQQPVQLTKESEPSARTKFYFEQSW 152
           FLCGPAEPQQPVQLTKESEPSARTKFYFEQSW
Sbjct: 121 FLCGPAEPQQPVQLTKESEPSARTKFYFEQSW 152


>gi|27894304 interleukin 1 family, member 10 [Homo sapiens]
          Length = 152

 Score =  318 bits (815), Expect = 1e-87
 Identities = 152/152 (100%), Positives = 152/152 (100%)

Query: 1   MCSLPMARYYIIKYADQKALYTRDGQLLVGDPVADNCCAEKICILPNRGLARTKVPIFLG 60
           MCSLPMARYYIIKYADQKALYTRDGQLLVGDPVADNCCAEKICILPNRGLARTKVPIFLG
Sbjct: 1   MCSLPMARYYIIKYADQKALYTRDGQLLVGDPVADNCCAEKICILPNRGLARTKVPIFLG 60

Query: 61  IQGGSRCLACVETEEGPSLQLEDVNIEELYKGGEEATRFTFFQSSSGSAFRLEAAAWPGW 120
           IQGGSRCLACVETEEGPSLQLEDVNIEELYKGGEEATRFTFFQSSSGSAFRLEAAAWPGW
Sbjct: 61  IQGGSRCLACVETEEGPSLQLEDVNIEELYKGGEEATRFTFFQSSSGSAFRLEAAAWPGW 120

Query: 121 FLCGPAEPQQPVQLTKESEPSARTKFYFEQSW 152
           FLCGPAEPQQPVQLTKESEPSARTKFYFEQSW
Sbjct: 121 FLCGPAEPQQPVQLTKESEPSARTKFYFEQSW 152


>gi|27894310 interleukin 1 family, member 5 [Homo sapiens]
          Length = 155

 Score =  109 bits (272), Expect = 1e-24
 Identities = 62/138 (44%), Positives = 83/138 (60%), Gaps = 6/138 (4%)

Query: 18  KALYTRDGQLLVGDPVADNCC-AEKICILPNRGLARTKVPIFLGIQGGSRCLACVETEEG 76
           K LY  + QLL G   A      E+I ++PNR L  +  P+ LG+QGGS+CL+C   +E 
Sbjct: 17  KVLYLHNNQLLAGGLHAGKVIKGEEISVVPNRWLDASLSPVILGVQGGSQCLSCGVGQE- 75

Query: 77  PSLQLEDVNIEELYKGGEEATRFTFFQSSSGSAFRLEAAAWPGWFLCGPAEPQQPVQLTK 136
           P+L LE VNI ELY G +E+  FTF++   G     E+AA+PGWFLC   E  QPV+LT+
Sbjct: 76  PTLTLEPVNIMELYLGAKESKSFTFYRRDMGLTSSFESAAYPGWFLCTVPEADQPVRLTQ 135

Query: 137 ESE----PSARTKFYFEQ 150
             E     +  T FYF+Q
Sbjct: 136 LPENGGWNAPITDFYFQQ 153


>gi|6912432 interleukin 1 family, member 5 [Homo sapiens]
          Length = 155

 Score =  109 bits (272), Expect = 1e-24
 Identities = 62/138 (44%), Positives = 83/138 (60%), Gaps = 6/138 (4%)

Query: 18  KALYTRDGQLLVGDPVADNCC-AEKICILPNRGLARTKVPIFLGIQGGSRCLACVETEEG 76
           K LY  + QLL G   A      E+I ++PNR L  +  P+ LG+QGGS+CL+C   +E 
Sbjct: 17  KVLYLHNNQLLAGGLHAGKVIKGEEISVVPNRWLDASLSPVILGVQGGSQCLSCGVGQE- 75

Query: 77  PSLQLEDVNIEELYKGGEEATRFTFFQSSSGSAFRLEAAAWPGWFLCGPAEPQQPVQLTK 136
           P+L LE VNI ELY G +E+  FTF++   G     E+AA+PGWFLC   E  QPV+LT+
Sbjct: 76  PTLTLEPVNIMELYLGAKESKSFTFYRRDMGLTSSFESAAYPGWFLCTVPEADQPVRLTQ 135

Query: 137 ESE----PSARTKFYFEQ 150
             E     +  T FYF+Q
Sbjct: 136 LPENGGWNAPITDFYFQQ 153


>gi|27894321 interleukin 1 receptor antagonist isoform 4 [Homo
           sapiens]
          Length = 143

 Score = 96.7 bits (239), Expect = 7e-21
 Identities = 57/137 (41%), Positives = 76/137 (55%), Gaps = 7/137 (5%)

Query: 16  DQKALYTRDGQLLVGDPVADNC-CAEKICILPNRGLARTKVPIFLGIQGGSRCLACVETE 74
           +QK  Y R+ QL+ G     N    EKI ++P    A     +FLGI GG  CL+CV++ 
Sbjct: 10  NQKTFYLRNNQLVAGYLQGPNVNLEEKIDVVPIEPHA-----LFLGIHGGKMCLSCVKSG 64

Query: 75  EGPSLQLEDVNIEELYKGGEEATRFTFFQSSSGSAFRLEAAAWPGWFLCGPAEPQQPVQL 134
           +   LQLE VNI +L +  ++  RF F +S SG     E+AA PGWFLC   E  QPV L
Sbjct: 65  DETRLQLEAVNITDLSENRKQDKRFAFIRSDSGPTTSFESAACPGWFLCTAMEADQPVSL 124

Query: 135 TKESEPSAR-TKFYFEQ 150
           T   +     TKFYF++
Sbjct: 125 TNMPDEGVMVTKFYFQE 141


>gi|27894319 interleukin 1 receptor antagonist isoform 1 precursor
           [Homo sapiens]
          Length = 177

 Score = 96.7 bits (239), Expect = 7e-21
 Identities = 57/137 (41%), Positives = 76/137 (55%), Gaps = 7/137 (5%)

Query: 16  DQKALYTRDGQLLVGDPVADNC-CAEKICILPNRGLARTKVPIFLGIQGGSRCLACVETE 74
           +QK  Y R+ QL+ G     N    EKI ++P    A     +FLGI GG  CL+CV++ 
Sbjct: 44  NQKTFYLRNNQLVAGYLQGPNVNLEEKIDVVPIEPHA-----LFLGIHGGKMCLSCVKSG 98

Query: 75  EGPSLQLEDVNIEELYKGGEEATRFTFFQSSSGSAFRLEAAAWPGWFLCGPAEPQQPVQL 134
           +   LQLE VNI +L +  ++  RF F +S SG     E+AA PGWFLC   E  QPV L
Sbjct: 99  DETRLQLEAVNITDLSENRKQDKRFAFIRSDSGPTTSFESAACPGWFLCTAMEADQPVSL 158

Query: 135 TKESEPSAR-TKFYFEQ 150
           T   +     TKFYF++
Sbjct: 159 TNMPDEGVMVTKFYFQE 175


>gi|27894317 interleukin 1 receptor antagonist isoform 2 [Homo
           sapiens]
          Length = 180

 Score = 96.7 bits (239), Expect = 7e-21
 Identities = 57/137 (41%), Positives = 76/137 (55%), Gaps = 7/137 (5%)

Query: 16  DQKALYTRDGQLLVGDPVADNC-CAEKICILPNRGLARTKVPIFLGIQGGSRCLACVETE 74
           +QK  Y R+ QL+ G     N    EKI ++P    A     +FLGI GG  CL+CV++ 
Sbjct: 47  NQKTFYLRNNQLVAGYLQGPNVNLEEKIDVVPIEPHA-----LFLGIHGGKMCLSCVKSG 101

Query: 75  EGPSLQLEDVNIEELYKGGEEATRFTFFQSSSGSAFRLEAAAWPGWFLCGPAEPQQPVQL 134
           +   LQLE VNI +L +  ++  RF F +S SG     E+AA PGWFLC   E  QPV L
Sbjct: 102 DETRLQLEAVNITDLSENRKQDKRFAFIRSDSGPTTSFESAACPGWFLCTAMEADQPVSL 161

Query: 135 TKESEPSAR-TKFYFEQ 150
           T   +     TKFYF++
Sbjct: 162 TNMPDEGVMVTKFYFQE 178


>gi|10835147 interleukin 1 receptor antagonist isoform 3 [Homo
           sapiens]
          Length = 159

 Score = 96.7 bits (239), Expect = 7e-21
 Identities = 57/137 (41%), Positives = 76/137 (55%), Gaps = 7/137 (5%)

Query: 16  DQKALYTRDGQLLVGDPVADNC-CAEKICILPNRGLARTKVPIFLGIQGGSRCLACVETE 74
           +QK  Y R+ QL+ G     N    EKI ++P    A     +FLGI GG  CL+CV++ 
Sbjct: 26  NQKTFYLRNNQLVAGYLQGPNVNLEEKIDVVPIEPHA-----LFLGIHGGKMCLSCVKSG 80

Query: 75  EGPSLQLEDVNIEELYKGGEEATRFTFFQSSSGSAFRLEAAAWPGWFLCGPAEPQQPVQL 134
           +   LQLE VNI +L +  ++  RF F +S SG     E+AA PGWFLC   E  QPV L
Sbjct: 81  DETRLQLEAVNITDLSENRKQDKRFAFIRSDSGPTTSFESAACPGWFLCTAMEADQPVSL 140

Query: 135 TKESEPSAR-TKFYFEQ 150
           T   +     TKFYF++
Sbjct: 141 TNMPDEGVMVTKFYFQE 157


>gi|27894313 interleukin 1 family, member 8 isoform 2 [Homo sapiens]
          Length = 157

 Score = 72.4 bits (176), Expect = 1e-13
 Identities = 34/93 (36%), Positives = 52/93 (55%)

Query: 57  IFLGIQGGSRCLACVETEEGPSLQLEDVNIEELYKGGEEATRFTFFQSSSGSAFRLEAAA 116
           ++LGI+G   CL C E +  P+LQL++ NI +LY   +    F FF +  GS    ++ +
Sbjct: 62  VYLGIKGKDLCLFCAEIQGKPTLQLKEKNIMDLYVEKKAQKPFLFFHNKEGSTSVFQSVS 121

Query: 117 WPGWFLCGPAEPQQPVQLTKESEPSARTKFYFE 149
           +PGWF+       QP+ LTKE   +  T FY +
Sbjct: 122 YPGWFIATSTTSGQPIFLTKERGITNNTNFYLD 154


>gi|9665234 interleukin 1 family, member 9 [Homo sapiens]
          Length = 169

 Score = 70.1 bits (170), Expect = 7e-13
 Identities = 43/131 (32%), Positives = 66/131 (50%), Gaps = 5/131 (3%)

Query: 20  LYTRDGQLLVGDPVADNCCAEKICIL----PNRGLARTKVPIFLGIQGGSRCLACVETEE 75
           ++T  GQ LV  P +D+     + ++    P         PI+LGIQ    CL C +  E
Sbjct: 34  VWTLQGQNLVAVPRSDSVTPVTVAVITCKYPEALEQGRGDPIYLGIQNPEMCLYCEKVGE 93

Query: 76  GPSLQLEDVNIEELYKGGEEATRFTFFQSSSGSAFRLEAAAWPGWFLCGPAEPQQPVQLT 135
            P+LQL++  I +LY   E    F F+++ +G    LE+ A+P WF+   ++  QP+ LT
Sbjct: 94  QPTLQLKEQKIMDLYGQPEPVKPFLFYRAKTGRTSTLESVAFPDWFIAS-SKRDQPIILT 152

Query: 136 KESEPSARTKF 146
            E   S  T F
Sbjct: 153 SELGKSYNTAF 163


>gi|7657092 interleukin 1 family, member 6 (epsilon) [Homo sapiens]
          Length = 158

 Score = 68.6 bits (166), Expect = 2e-12
 Identities = 34/91 (37%), Positives = 52/91 (57%)

Query: 56  PIFLGIQGGSRCLACVETEEGPSLQLEDVNIEELYKGGEEATRFTFFQSSSGSAFRLEAA 115
           PI+LG+ G + CL C +  + P+LQL++ +I +LY   E    F F+ S SG     E+ 
Sbjct: 62  PIYLGLNGLNLCLMCAKVGDQPTLQLKEKDIMDLYNQPEPVKSFLFYHSQSGRNSTFESV 121

Query: 116 AWPGWFLCGPAEPQQPVQLTKESEPSARTKF 146
           A+PGWF+   +E   P+ LT+E   +  T F
Sbjct: 122 AFPGWFIAVSSEGGCPLILTQELGKANTTDF 152


>gi|27894298 interleukin 1 family, member 7 isoform 3 [Homo sapiens]
          Length = 157

 Score = 63.5 bits (153), Expect = 6e-11
 Identities = 41/120 (34%), Positives = 59/120 (49%), Gaps = 7/120 (5%)

Query: 37  CCAEKICILPNRGLARTKV----PIFLGIQGGSRCLACVET--EEGPSLQLEDVNIEELY 90
           CC E+I       L+        PI LG+  G  CL C +   +  PSLQL+   + +L 
Sbjct: 24  CCLEEIFFALASSLSSASAEKGSPILLGVSKGEFCLYCDKDKGQSHPSLQLKKEKLMKLA 83

Query: 91  KGGEEATR-FTFFQSSSGSAFRLEAAAWPGWFLCGPAEPQQPVQLTKESEPSARTKFYFE 149
              E A R F F+++  GS   LE+AA PGWF+C      +PV +T + E     +F F+
Sbjct: 84  AQKESARRPFIFYRAQVGSWNMLESAAHPGWFICTSCNCNEPVGVTDKFENRKHIEFSFQ 143


>gi|27894296 interleukin 1 family, member 7 isoform 2 [Homo sapiens]
          Length = 197

 Score = 60.8 bits (146), Expect = 4e-10
 Identities = 36/97 (37%), Positives = 52/97 (53%), Gaps = 3/97 (3%)

Query: 56  PIFLGIQGGSRCLACVET--EEGPSLQLEDVNIEELYKGGEEATR-FTFFQSSSGSAFRL 112
           PI LG+  G  CL C +   +  PSLQL+   + +L    E A R F F+++  GS   L
Sbjct: 87  PILLGVSKGEFCLYCDKDKGQSHPSLQLKKEKLMKLAAQKESARRPFIFYRAQVGSWNML 146

Query: 113 EAAAWPGWFLCGPAEPQQPVQLTKESEPSARTKFYFE 149
           E+AA PGWF+C      +PV +T + E     +F F+
Sbjct: 147 ESAAHPGWFICTSCNCNEPVGVTDKFENRKHIEFSFQ 183


>gi|20127524 interleukin 1 family, member 7 isoform 1 proprotein
           [Homo sapiens]
          Length = 218

 Score = 60.8 bits (146), Expect = 4e-10
 Identities = 36/97 (37%), Positives = 52/97 (53%), Gaps = 3/97 (3%)

Query: 56  PIFLGIQGGSRCLACVET--EEGPSLQLEDVNIEELYKGGEEATR-FTFFQSSSGSAFRL 112
           PI LG+  G  CL C +   +  PSLQL+   + +L    E A R F F+++  GS   L
Sbjct: 108 PILLGVSKGEFCLYCDKDKGQSHPSLQLKKEKLMKLAAQKESARRPFIFYRAQVGSWNML 167

Query: 113 EAAAWPGWFLCGPAEPQQPVQLTKESEPSARTKFYFE 149
           E+AA PGWF+C      +PV +T + E     +F F+
Sbjct: 168 ESAAHPGWFICTSCNCNEPVGVTDKFENRKHIEFSFQ 204


>gi|27894302 interleukin 1 family, member 7 isoform 5 [Homo sapiens]
          Length = 192

 Score = 60.8 bits (146), Expect = 4e-10
 Identities = 36/97 (37%), Positives = 52/97 (53%), Gaps = 3/97 (3%)

Query: 56  PIFLGIQGGSRCLACVET--EEGPSLQLEDVNIEELYKGGEEATR-FTFFQSSSGSAFRL 112
           PI LG+  G  CL C +   +  PSLQL+   + +L    E A R F F+++  GS   L
Sbjct: 82  PILLGVSKGEFCLYCDKDKGQSHPSLQLKKEKLMKLAAQKESARRPFIFYRAQVGSWNML 141

Query: 113 EAAAWPGWFLCGPAEPQQPVQLTKESEPSARTKFYFE 149
           E+AA PGWF+C      +PV +T + E     +F F+
Sbjct: 142 ESAAHPGWFICTSCNCNEPVGVTDKFENRKHIEFSFQ 178


>gi|27894300 interleukin 1 family, member 7 isoform 4 [Homo sapiens]
          Length = 178

 Score = 60.8 bits (146), Expect = 4e-10
 Identities = 36/97 (37%), Positives = 52/97 (53%), Gaps = 3/97 (3%)

Query: 56  PIFLGIQGGSRCLACVET--EEGPSLQLEDVNIEELYKGGEEATR-FTFFQSSSGSAFRL 112
           PI LG+  G  CL C +   +  PSLQL+   + +L    E A R F F+++  GS   L
Sbjct: 68  PILLGVSKGEFCLYCDKDKGQSHPSLQLKKEKLMKLAAQKESARRPFIFYRAQVGSWNML 127

Query: 113 EAAAWPGWFLCGPAEPQQPVQLTKESEPSARTKFYFE 149
           E+AA PGWF+C      +PV +T + E     +F F+
Sbjct: 128 ESAAHPGWFICTSCNCNEPVGVTDKFENRKHIEFSFQ 164


>gi|10835145 interleukin 1, beta proprotein [Homo sapiens]
          Length = 269

 Score = 44.3 bits (103), Expect = 4e-05
 Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 1/81 (1%)

Query: 54  KVPIFLGIQGGSRCLACVETEEGPSLQLEDVNIEELYKGGEEATRFTFFQSSSGSAFRLE 113
           K+P+ LG++  +  L+CV  ++ P+LQLE V+ +  Y   +   RF F +    +    E
Sbjct: 171 KIPVALGLKEKNLYLSCVLKDDKPTLQLESVDPKN-YPKKKMEKRFVFNKIEINNKLEFE 229

Query: 114 AAAWPGWFLCGPAEPQQPVQL 134
           +A +P W++        PV L
Sbjct: 230 SAQFPNWYISTSQAENMPVFL 250


>gi|126091152 cubilin [Homo sapiens]
          Length = 3623

 Score = 33.9 bits (76), Expect = 0.055
 Identities = 33/121 (27%), Positives = 51/121 (42%), Gaps = 12/121 (9%)

Query: 18   KALYTRDGQLLVGDPVADNCCAEK-IC--ILPNRGLARTKVPIFLGIQGGSRCLACVETE 74
            K ++  DG    G   A    +E  +C   LPN        P + G++  SR L C  T 
Sbjct: 2544 KVIFFTDGSRPYGGFTASYTSSEDAVCGGSLPNTPEGNFTSPGYDGVRNYSRNLNCEWTL 2603

Query: 75   EGPSLQLEDVNI--EELYKGGEEATRFTFFQSSSGSAFRLEAAAWP-GWFLCGPAEPQQP 131
              P+     ++I  E+ Y    +  +F   +      FR+  A  P  W LCGP++P  P
Sbjct: 2604 SNPNQGNSSISIHFEDFYLESHQDCQFDVLE------FRVGDADGPLMWRLCGPSKPTLP 2657

Query: 132  V 132
            +
Sbjct: 2658 L 2658


>gi|20070252 interleukin 1 family, member 8 isoform 1 [Homo
          sapiens]
          Length = 164

 Score = 30.4 bits (67), Expect = 0.61
 Identities = 12/26 (46%), Positives = 18/26 (69%)

Query: 57 IFLGIQGGSRCLACVETEEGPSLQLE 82
          ++LGI+G   CL C E +  P+LQL+
Sbjct: 62 VYLGIKGKDLCLFCAEIQGKPTLQLK 87


>gi|192449449 ubiquitin-conjugating enzyme E2O [Homo sapiens]
          Length = 1292

 Score = 29.3 bits (64), Expect = 1.4
 Identities = 32/121 (26%), Positives = 46/121 (38%), Gaps = 27/121 (22%)

Query: 28  LVGDPVADNCCAEKICILPNRGLARTKVPIFLGIQGGSRCLACVETEEGPSLQLEDVNIE 87
           + GD +A +C   K+  L N+        I L +  G+RC   + TE+G  L     ++ 
Sbjct: 199 MYGDYIAYDCWLGKVYDLKNQ--------IILKLSNGARC--SMNTEDGAKLYDVCPHV- 247

Query: 88  ELYKGGEEATRFTFFQSSSGSAFRLEAAAWPGWFLCGPAEPQQPVQLTKESEPSARTKFY 147
                           S SG  F      +PG  L GPA+    VQ     +P   TK  
Sbjct: 248 ----------------SDSGLFFDDSYGFYPGQVLIGPAKIFSSVQWLSGVKPVLSTKSK 291

Query: 148 F 148
           F
Sbjct: 292 F 292


>gi|169160919 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 404

 Score = 28.5 bits (62), Expect = 2.3
 Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 7/80 (8%)

Query: 20  LYTRDGQLLVGDPVADNCCAEKICILPNRG--LARTKVPIFLGIQGGSRCLACVETEEGP 77
           L  R   L+VG   A+   AE +  L  R   LAR + P+   +   +  LA V  + GP
Sbjct: 304 LLARVDALVVGQMRAE---AEGLAALGARVGLLARVQAPVLEQVGAPAEALAAVGAQVGP 360

Query: 78  --SLQLEDVNIEELYKGGEE 95
              +Q + V  EE  KGG++
Sbjct: 361 LARVQAQVVGQEEKSKGGDQ 380


>gi|169162159 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 404

 Score = 28.5 bits (62), Expect = 2.3
 Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 7/80 (8%)

Query: 20  LYTRDGQLLVGDPVADNCCAEKICILPNRG--LARTKVPIFLGIQGGSRCLACVETEEGP 77
           L  R   L+VG   A+   AE +  L  R   LAR + P+   +   +  LA V  + GP
Sbjct: 304 LLARVDALVVGQMRAE---AEGLAALGARVGLLARVQAPVLEQVGAPAEALAAVGAQVGP 360

Query: 78  --SLQLEDVNIEELYKGGEE 95
              +Q + V  EE  KGG++
Sbjct: 361 LARVQAQVVGQEEKSKGGDQ 380


>gi|169161152 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 404

 Score = 28.5 bits (62), Expect = 2.3
 Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 7/80 (8%)

Query: 20  LYTRDGQLLVGDPVADNCCAEKICILPNRG--LARTKVPIFLGIQGGSRCLACVETEEGP 77
           L  R   L+VG   A+   AE +  L  R   LAR + P+   +   +  LA V  + GP
Sbjct: 304 LLARVDALVVGQMRAE---AEGLAALGARVGLLARVQAPVLEQVGAPAEALAAVGAQVGP 360

Query: 78  --SLQLEDVNIEELYKGGEE 95
              +Q + V  EE  KGG++
Sbjct: 361 LARVQAQVVGQEEKSKGGDQ 380


>gi|239755589 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 356

 Score = 26.9 bits (58), Expect = 6.7
 Identities = 14/46 (30%), Positives = 21/46 (45%)

Query: 105 SSGSAFRLEAAAWPGWFLCGPAEPQQPVQLTKESEPSARTKFYFEQ 150
           SS S+  L ++AWPG        P Q +      +P+A T +   Q
Sbjct: 235 SSESSSELSSSAWPGTIWTSTLSPGQRLPTPPPPDPAALTSWGLPQ 280


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.136    0.430 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,434,866
Number of Sequences: 37866
Number of extensions: 284981
Number of successful extensions: 641
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 614
Number of HSP's gapped (non-prelim): 25
length of query: 152
length of database: 18,247,518
effective HSP length: 93
effective length of query: 59
effective length of database: 14,725,980
effective search space: 868832820
effective search space used: 868832820
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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