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Search of human proteins with 27894304
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|27894304 interleukin 1 family, member 10 [Homo sapiens]
(152 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|27894307 interleukin 1 family, member 10 [Homo sapiens] 318 1e-87
gi|27894304 interleukin 1 family, member 10 [Homo sapiens] 318 1e-87
gi|27894310 interleukin 1 family, member 5 [Homo sapiens] 109 1e-24
gi|6912432 interleukin 1 family, member 5 [Homo sapiens] 109 1e-24
gi|27894321 interleukin 1 receptor antagonist isoform 4 [Homo sa... 97 7e-21
gi|27894319 interleukin 1 receptor antagonist isoform 1 precurso... 97 7e-21
gi|27894317 interleukin 1 receptor antagonist isoform 2 [Homo sa... 97 7e-21
gi|10835147 interleukin 1 receptor antagonist isoform 3 [Homo sa... 97 7e-21
gi|27894313 interleukin 1 family, member 8 isoform 2 [Homo sapiens] 72 1e-13
gi|9665234 interleukin 1 family, member 9 [Homo sapiens] 70 7e-13
gi|7657092 interleukin 1 family, member 6 (epsilon) [Homo sapiens] 69 2e-12
gi|27894298 interleukin 1 family, member 7 isoform 3 [Homo sapiens] 64 6e-11
gi|27894296 interleukin 1 family, member 7 isoform 2 [Homo sapiens] 61 4e-10
gi|20127524 interleukin 1 family, member 7 isoform 1 proprotein ... 61 4e-10
gi|27894302 interleukin 1 family, member 7 isoform 5 [Homo sapiens] 61 4e-10
gi|27894300 interleukin 1 family, member 7 isoform 4 [Homo sapiens] 61 4e-10
gi|10835145 interleukin 1, beta proprotein [Homo sapiens] 44 4e-05
gi|126091152 cubilin [Homo sapiens] 34 0.055
gi|20070252 interleukin 1 family, member 8 isoform 1 [Homo sapiens] 30 0.61
gi|192449449 ubiquitin-conjugating enzyme E2O [Homo sapiens] 29 1.4
gi|169160919 PREDICTED: hypothetical protein [Homo sapiens] 28 2.3
gi|169162159 PREDICTED: hypothetical protein [Homo sapiens] 28 2.3
gi|169161152 PREDICTED: hypothetical protein [Homo sapiens] 28 2.3
gi|239755589 PREDICTED: hypothetical protein [Homo sapiens] 27 6.7
>gi|27894307 interleukin 1 family, member 10 [Homo sapiens]
Length = 152
Score = 318 bits (815), Expect = 1e-87
Identities = 152/152 (100%), Positives = 152/152 (100%)
Query: 1 MCSLPMARYYIIKYADQKALYTRDGQLLVGDPVADNCCAEKICILPNRGLARTKVPIFLG 60
MCSLPMARYYIIKYADQKALYTRDGQLLVGDPVADNCCAEKICILPNRGLARTKVPIFLG
Sbjct: 1 MCSLPMARYYIIKYADQKALYTRDGQLLVGDPVADNCCAEKICILPNRGLARTKVPIFLG 60
Query: 61 IQGGSRCLACVETEEGPSLQLEDVNIEELYKGGEEATRFTFFQSSSGSAFRLEAAAWPGW 120
IQGGSRCLACVETEEGPSLQLEDVNIEELYKGGEEATRFTFFQSSSGSAFRLEAAAWPGW
Sbjct: 61 IQGGSRCLACVETEEGPSLQLEDVNIEELYKGGEEATRFTFFQSSSGSAFRLEAAAWPGW 120
Query: 121 FLCGPAEPQQPVQLTKESEPSARTKFYFEQSW 152
FLCGPAEPQQPVQLTKESEPSARTKFYFEQSW
Sbjct: 121 FLCGPAEPQQPVQLTKESEPSARTKFYFEQSW 152
>gi|27894304 interleukin 1 family, member 10 [Homo sapiens]
Length = 152
Score = 318 bits (815), Expect = 1e-87
Identities = 152/152 (100%), Positives = 152/152 (100%)
Query: 1 MCSLPMARYYIIKYADQKALYTRDGQLLVGDPVADNCCAEKICILPNRGLARTKVPIFLG 60
MCSLPMARYYIIKYADQKALYTRDGQLLVGDPVADNCCAEKICILPNRGLARTKVPIFLG
Sbjct: 1 MCSLPMARYYIIKYADQKALYTRDGQLLVGDPVADNCCAEKICILPNRGLARTKVPIFLG 60
Query: 61 IQGGSRCLACVETEEGPSLQLEDVNIEELYKGGEEATRFTFFQSSSGSAFRLEAAAWPGW 120
IQGGSRCLACVETEEGPSLQLEDVNIEELYKGGEEATRFTFFQSSSGSAFRLEAAAWPGW
Sbjct: 61 IQGGSRCLACVETEEGPSLQLEDVNIEELYKGGEEATRFTFFQSSSGSAFRLEAAAWPGW 120
Query: 121 FLCGPAEPQQPVQLTKESEPSARTKFYFEQSW 152
FLCGPAEPQQPVQLTKESEPSARTKFYFEQSW
Sbjct: 121 FLCGPAEPQQPVQLTKESEPSARTKFYFEQSW 152
>gi|27894310 interleukin 1 family, member 5 [Homo sapiens]
Length = 155
Score = 109 bits (272), Expect = 1e-24
Identities = 62/138 (44%), Positives = 83/138 (60%), Gaps = 6/138 (4%)
Query: 18 KALYTRDGQLLVGDPVADNCC-AEKICILPNRGLARTKVPIFLGIQGGSRCLACVETEEG 76
K LY + QLL G A E+I ++PNR L + P+ LG+QGGS+CL+C +E
Sbjct: 17 KVLYLHNNQLLAGGLHAGKVIKGEEISVVPNRWLDASLSPVILGVQGGSQCLSCGVGQE- 75
Query: 77 PSLQLEDVNIEELYKGGEEATRFTFFQSSSGSAFRLEAAAWPGWFLCGPAEPQQPVQLTK 136
P+L LE VNI ELY G +E+ FTF++ G E+AA+PGWFLC E QPV+LT+
Sbjct: 76 PTLTLEPVNIMELYLGAKESKSFTFYRRDMGLTSSFESAAYPGWFLCTVPEADQPVRLTQ 135
Query: 137 ESE----PSARTKFYFEQ 150
E + T FYF+Q
Sbjct: 136 LPENGGWNAPITDFYFQQ 153
>gi|6912432 interleukin 1 family, member 5 [Homo sapiens]
Length = 155
Score = 109 bits (272), Expect = 1e-24
Identities = 62/138 (44%), Positives = 83/138 (60%), Gaps = 6/138 (4%)
Query: 18 KALYTRDGQLLVGDPVADNCC-AEKICILPNRGLARTKVPIFLGIQGGSRCLACVETEEG 76
K LY + QLL G A E+I ++PNR L + P+ LG+QGGS+CL+C +E
Sbjct: 17 KVLYLHNNQLLAGGLHAGKVIKGEEISVVPNRWLDASLSPVILGVQGGSQCLSCGVGQE- 75
Query: 77 PSLQLEDVNIEELYKGGEEATRFTFFQSSSGSAFRLEAAAWPGWFLCGPAEPQQPVQLTK 136
P+L LE VNI ELY G +E+ FTF++ G E+AA+PGWFLC E QPV+LT+
Sbjct: 76 PTLTLEPVNIMELYLGAKESKSFTFYRRDMGLTSSFESAAYPGWFLCTVPEADQPVRLTQ 135
Query: 137 ESE----PSARTKFYFEQ 150
E + T FYF+Q
Sbjct: 136 LPENGGWNAPITDFYFQQ 153
>gi|27894321 interleukin 1 receptor antagonist isoform 4 [Homo
sapiens]
Length = 143
Score = 96.7 bits (239), Expect = 7e-21
Identities = 57/137 (41%), Positives = 76/137 (55%), Gaps = 7/137 (5%)
Query: 16 DQKALYTRDGQLLVGDPVADNC-CAEKICILPNRGLARTKVPIFLGIQGGSRCLACVETE 74
+QK Y R+ QL+ G N EKI ++P A +FLGI GG CL+CV++
Sbjct: 10 NQKTFYLRNNQLVAGYLQGPNVNLEEKIDVVPIEPHA-----LFLGIHGGKMCLSCVKSG 64
Query: 75 EGPSLQLEDVNIEELYKGGEEATRFTFFQSSSGSAFRLEAAAWPGWFLCGPAEPQQPVQL 134
+ LQLE VNI +L + ++ RF F +S SG E+AA PGWFLC E QPV L
Sbjct: 65 DETRLQLEAVNITDLSENRKQDKRFAFIRSDSGPTTSFESAACPGWFLCTAMEADQPVSL 124
Query: 135 TKESEPSAR-TKFYFEQ 150
T + TKFYF++
Sbjct: 125 TNMPDEGVMVTKFYFQE 141
>gi|27894319 interleukin 1 receptor antagonist isoform 1 precursor
[Homo sapiens]
Length = 177
Score = 96.7 bits (239), Expect = 7e-21
Identities = 57/137 (41%), Positives = 76/137 (55%), Gaps = 7/137 (5%)
Query: 16 DQKALYTRDGQLLVGDPVADNC-CAEKICILPNRGLARTKVPIFLGIQGGSRCLACVETE 74
+QK Y R+ QL+ G N EKI ++P A +FLGI GG CL+CV++
Sbjct: 44 NQKTFYLRNNQLVAGYLQGPNVNLEEKIDVVPIEPHA-----LFLGIHGGKMCLSCVKSG 98
Query: 75 EGPSLQLEDVNIEELYKGGEEATRFTFFQSSSGSAFRLEAAAWPGWFLCGPAEPQQPVQL 134
+ LQLE VNI +L + ++ RF F +S SG E+AA PGWFLC E QPV L
Sbjct: 99 DETRLQLEAVNITDLSENRKQDKRFAFIRSDSGPTTSFESAACPGWFLCTAMEADQPVSL 158
Query: 135 TKESEPSAR-TKFYFEQ 150
T + TKFYF++
Sbjct: 159 TNMPDEGVMVTKFYFQE 175
>gi|27894317 interleukin 1 receptor antagonist isoform 2 [Homo
sapiens]
Length = 180
Score = 96.7 bits (239), Expect = 7e-21
Identities = 57/137 (41%), Positives = 76/137 (55%), Gaps = 7/137 (5%)
Query: 16 DQKALYTRDGQLLVGDPVADNC-CAEKICILPNRGLARTKVPIFLGIQGGSRCLACVETE 74
+QK Y R+ QL+ G N EKI ++P A +FLGI GG CL+CV++
Sbjct: 47 NQKTFYLRNNQLVAGYLQGPNVNLEEKIDVVPIEPHA-----LFLGIHGGKMCLSCVKSG 101
Query: 75 EGPSLQLEDVNIEELYKGGEEATRFTFFQSSSGSAFRLEAAAWPGWFLCGPAEPQQPVQL 134
+ LQLE VNI +L + ++ RF F +S SG E+AA PGWFLC E QPV L
Sbjct: 102 DETRLQLEAVNITDLSENRKQDKRFAFIRSDSGPTTSFESAACPGWFLCTAMEADQPVSL 161
Query: 135 TKESEPSAR-TKFYFEQ 150
T + TKFYF++
Sbjct: 162 TNMPDEGVMVTKFYFQE 178
>gi|10835147 interleukin 1 receptor antagonist isoform 3 [Homo
sapiens]
Length = 159
Score = 96.7 bits (239), Expect = 7e-21
Identities = 57/137 (41%), Positives = 76/137 (55%), Gaps = 7/137 (5%)
Query: 16 DQKALYTRDGQLLVGDPVADNC-CAEKICILPNRGLARTKVPIFLGIQGGSRCLACVETE 74
+QK Y R+ QL+ G N EKI ++P A +FLGI GG CL+CV++
Sbjct: 26 NQKTFYLRNNQLVAGYLQGPNVNLEEKIDVVPIEPHA-----LFLGIHGGKMCLSCVKSG 80
Query: 75 EGPSLQLEDVNIEELYKGGEEATRFTFFQSSSGSAFRLEAAAWPGWFLCGPAEPQQPVQL 134
+ LQLE VNI +L + ++ RF F +S SG E+AA PGWFLC E QPV L
Sbjct: 81 DETRLQLEAVNITDLSENRKQDKRFAFIRSDSGPTTSFESAACPGWFLCTAMEADQPVSL 140
Query: 135 TKESEPSAR-TKFYFEQ 150
T + TKFYF++
Sbjct: 141 TNMPDEGVMVTKFYFQE 157
>gi|27894313 interleukin 1 family, member 8 isoform 2 [Homo sapiens]
Length = 157
Score = 72.4 bits (176), Expect = 1e-13
Identities = 34/93 (36%), Positives = 52/93 (55%)
Query: 57 IFLGIQGGSRCLACVETEEGPSLQLEDVNIEELYKGGEEATRFTFFQSSSGSAFRLEAAA 116
++LGI+G CL C E + P+LQL++ NI +LY + F FF + GS ++ +
Sbjct: 62 VYLGIKGKDLCLFCAEIQGKPTLQLKEKNIMDLYVEKKAQKPFLFFHNKEGSTSVFQSVS 121
Query: 117 WPGWFLCGPAEPQQPVQLTKESEPSARTKFYFE 149
+PGWF+ QP+ LTKE + T FY +
Sbjct: 122 YPGWFIATSTTSGQPIFLTKERGITNNTNFYLD 154
>gi|9665234 interleukin 1 family, member 9 [Homo sapiens]
Length = 169
Score = 70.1 bits (170), Expect = 7e-13
Identities = 43/131 (32%), Positives = 66/131 (50%), Gaps = 5/131 (3%)
Query: 20 LYTRDGQLLVGDPVADNCCAEKICIL----PNRGLARTKVPIFLGIQGGSRCLACVETEE 75
++T GQ LV P +D+ + ++ P PI+LGIQ CL C + E
Sbjct: 34 VWTLQGQNLVAVPRSDSVTPVTVAVITCKYPEALEQGRGDPIYLGIQNPEMCLYCEKVGE 93
Query: 76 GPSLQLEDVNIEELYKGGEEATRFTFFQSSSGSAFRLEAAAWPGWFLCGPAEPQQPVQLT 135
P+LQL++ I +LY E F F+++ +G LE+ A+P WF+ ++ QP+ LT
Sbjct: 94 QPTLQLKEQKIMDLYGQPEPVKPFLFYRAKTGRTSTLESVAFPDWFIAS-SKRDQPIILT 152
Query: 136 KESEPSARTKF 146
E S T F
Sbjct: 153 SELGKSYNTAF 163
>gi|7657092 interleukin 1 family, member 6 (epsilon) [Homo sapiens]
Length = 158
Score = 68.6 bits (166), Expect = 2e-12
Identities = 34/91 (37%), Positives = 52/91 (57%)
Query: 56 PIFLGIQGGSRCLACVETEEGPSLQLEDVNIEELYKGGEEATRFTFFQSSSGSAFRLEAA 115
PI+LG+ G + CL C + + P+LQL++ +I +LY E F F+ S SG E+
Sbjct: 62 PIYLGLNGLNLCLMCAKVGDQPTLQLKEKDIMDLYNQPEPVKSFLFYHSQSGRNSTFESV 121
Query: 116 AWPGWFLCGPAEPQQPVQLTKESEPSARTKF 146
A+PGWF+ +E P+ LT+E + T F
Sbjct: 122 AFPGWFIAVSSEGGCPLILTQELGKANTTDF 152
>gi|27894298 interleukin 1 family, member 7 isoform 3 [Homo sapiens]
Length = 157
Score = 63.5 bits (153), Expect = 6e-11
Identities = 41/120 (34%), Positives = 59/120 (49%), Gaps = 7/120 (5%)
Query: 37 CCAEKICILPNRGLARTKV----PIFLGIQGGSRCLACVET--EEGPSLQLEDVNIEELY 90
CC E+I L+ PI LG+ G CL C + + PSLQL+ + +L
Sbjct: 24 CCLEEIFFALASSLSSASAEKGSPILLGVSKGEFCLYCDKDKGQSHPSLQLKKEKLMKLA 83
Query: 91 KGGEEATR-FTFFQSSSGSAFRLEAAAWPGWFLCGPAEPQQPVQLTKESEPSARTKFYFE 149
E A R F F+++ GS LE+AA PGWF+C +PV +T + E +F F+
Sbjct: 84 AQKESARRPFIFYRAQVGSWNMLESAAHPGWFICTSCNCNEPVGVTDKFENRKHIEFSFQ 143
>gi|27894296 interleukin 1 family, member 7 isoform 2 [Homo sapiens]
Length = 197
Score = 60.8 bits (146), Expect = 4e-10
Identities = 36/97 (37%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
Query: 56 PIFLGIQGGSRCLACVET--EEGPSLQLEDVNIEELYKGGEEATR-FTFFQSSSGSAFRL 112
PI LG+ G CL C + + PSLQL+ + +L E A R F F+++ GS L
Sbjct: 87 PILLGVSKGEFCLYCDKDKGQSHPSLQLKKEKLMKLAAQKESARRPFIFYRAQVGSWNML 146
Query: 113 EAAAWPGWFLCGPAEPQQPVQLTKESEPSARTKFYFE 149
E+AA PGWF+C +PV +T + E +F F+
Sbjct: 147 ESAAHPGWFICTSCNCNEPVGVTDKFENRKHIEFSFQ 183
>gi|20127524 interleukin 1 family, member 7 isoform 1 proprotein
[Homo sapiens]
Length = 218
Score = 60.8 bits (146), Expect = 4e-10
Identities = 36/97 (37%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
Query: 56 PIFLGIQGGSRCLACVET--EEGPSLQLEDVNIEELYKGGEEATR-FTFFQSSSGSAFRL 112
PI LG+ G CL C + + PSLQL+ + +L E A R F F+++ GS L
Sbjct: 108 PILLGVSKGEFCLYCDKDKGQSHPSLQLKKEKLMKLAAQKESARRPFIFYRAQVGSWNML 167
Query: 113 EAAAWPGWFLCGPAEPQQPVQLTKESEPSARTKFYFE 149
E+AA PGWF+C +PV +T + E +F F+
Sbjct: 168 ESAAHPGWFICTSCNCNEPVGVTDKFENRKHIEFSFQ 204
>gi|27894302 interleukin 1 family, member 7 isoform 5 [Homo sapiens]
Length = 192
Score = 60.8 bits (146), Expect = 4e-10
Identities = 36/97 (37%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
Query: 56 PIFLGIQGGSRCLACVET--EEGPSLQLEDVNIEELYKGGEEATR-FTFFQSSSGSAFRL 112
PI LG+ G CL C + + PSLQL+ + +L E A R F F+++ GS L
Sbjct: 82 PILLGVSKGEFCLYCDKDKGQSHPSLQLKKEKLMKLAAQKESARRPFIFYRAQVGSWNML 141
Query: 113 EAAAWPGWFLCGPAEPQQPVQLTKESEPSARTKFYFE 149
E+AA PGWF+C +PV +T + E +F F+
Sbjct: 142 ESAAHPGWFICTSCNCNEPVGVTDKFENRKHIEFSFQ 178
>gi|27894300 interleukin 1 family, member 7 isoform 4 [Homo sapiens]
Length = 178
Score = 60.8 bits (146), Expect = 4e-10
Identities = 36/97 (37%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
Query: 56 PIFLGIQGGSRCLACVET--EEGPSLQLEDVNIEELYKGGEEATR-FTFFQSSSGSAFRL 112
PI LG+ G CL C + + PSLQL+ + +L E A R F F+++ GS L
Sbjct: 68 PILLGVSKGEFCLYCDKDKGQSHPSLQLKKEKLMKLAAQKESARRPFIFYRAQVGSWNML 127
Query: 113 EAAAWPGWFLCGPAEPQQPVQLTKESEPSARTKFYFE 149
E+AA PGWF+C +PV +T + E +F F+
Sbjct: 128 ESAAHPGWFICTSCNCNEPVGVTDKFENRKHIEFSFQ 164
>gi|10835145 interleukin 1, beta proprotein [Homo sapiens]
Length = 269
Score = 44.3 bits (103), Expect = 4e-05
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 54 KVPIFLGIQGGSRCLACVETEEGPSLQLEDVNIEELYKGGEEATRFTFFQSSSGSAFRLE 113
K+P+ LG++ + L+CV ++ P+LQLE V+ + Y + RF F + + E
Sbjct: 171 KIPVALGLKEKNLYLSCVLKDDKPTLQLESVDPKN-YPKKKMEKRFVFNKIEINNKLEFE 229
Query: 114 AAAWPGWFLCGPAEPQQPVQL 134
+A +P W++ PV L
Sbjct: 230 SAQFPNWYISTSQAENMPVFL 250
>gi|126091152 cubilin [Homo sapiens]
Length = 3623
Score = 33.9 bits (76), Expect = 0.055
Identities = 33/121 (27%), Positives = 51/121 (42%), Gaps = 12/121 (9%)
Query: 18 KALYTRDGQLLVGDPVADNCCAEK-IC--ILPNRGLARTKVPIFLGIQGGSRCLACVETE 74
K ++ DG G A +E +C LPN P + G++ SR L C T
Sbjct: 2544 KVIFFTDGSRPYGGFTASYTSSEDAVCGGSLPNTPEGNFTSPGYDGVRNYSRNLNCEWTL 2603
Query: 75 EGPSLQLEDVNI--EELYKGGEEATRFTFFQSSSGSAFRLEAAAWP-GWFLCGPAEPQQP 131
P+ ++I E+ Y + +F + FR+ A P W LCGP++P P
Sbjct: 2604 SNPNQGNSSISIHFEDFYLESHQDCQFDVLE------FRVGDADGPLMWRLCGPSKPTLP 2657
Query: 132 V 132
+
Sbjct: 2658 L 2658
>gi|20070252 interleukin 1 family, member 8 isoform 1 [Homo
sapiens]
Length = 164
Score = 30.4 bits (67), Expect = 0.61
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 57 IFLGIQGGSRCLACVETEEGPSLQLE 82
++LGI+G CL C E + P+LQL+
Sbjct: 62 VYLGIKGKDLCLFCAEIQGKPTLQLK 87
>gi|192449449 ubiquitin-conjugating enzyme E2O [Homo sapiens]
Length = 1292
Score = 29.3 bits (64), Expect = 1.4
Identities = 32/121 (26%), Positives = 46/121 (38%), Gaps = 27/121 (22%)
Query: 28 LVGDPVADNCCAEKICILPNRGLARTKVPIFLGIQGGSRCLACVETEEGPSLQLEDVNIE 87
+ GD +A +C K+ L N+ I L + G+RC + TE+G L ++
Sbjct: 199 MYGDYIAYDCWLGKVYDLKNQ--------IILKLSNGARC--SMNTEDGAKLYDVCPHV- 247
Query: 88 ELYKGGEEATRFTFFQSSSGSAFRLEAAAWPGWFLCGPAEPQQPVQLTKESEPSARTKFY 147
S SG F +PG L GPA+ VQ +P TK
Sbjct: 248 ----------------SDSGLFFDDSYGFYPGQVLIGPAKIFSSVQWLSGVKPVLSTKSK 291
Query: 148 F 148
F
Sbjct: 292 F 292
>gi|169160919 PREDICTED: hypothetical protein [Homo sapiens]
Length = 404
Score = 28.5 bits (62), Expect = 2.3
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Query: 20 LYTRDGQLLVGDPVADNCCAEKICILPNRG--LARTKVPIFLGIQGGSRCLACVETEEGP 77
L R L+VG A+ AE + L R LAR + P+ + + LA V + GP
Sbjct: 304 LLARVDALVVGQMRAE---AEGLAALGARVGLLARVQAPVLEQVGAPAEALAAVGAQVGP 360
Query: 78 --SLQLEDVNIEELYKGGEE 95
+Q + V EE KGG++
Sbjct: 361 LARVQAQVVGQEEKSKGGDQ 380
>gi|169162159 PREDICTED: hypothetical protein [Homo sapiens]
Length = 404
Score = 28.5 bits (62), Expect = 2.3
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Query: 20 LYTRDGQLLVGDPVADNCCAEKICILPNRG--LARTKVPIFLGIQGGSRCLACVETEEGP 77
L R L+VG A+ AE + L R LAR + P+ + + LA V + GP
Sbjct: 304 LLARVDALVVGQMRAE---AEGLAALGARVGLLARVQAPVLEQVGAPAEALAAVGAQVGP 360
Query: 78 --SLQLEDVNIEELYKGGEE 95
+Q + V EE KGG++
Sbjct: 361 LARVQAQVVGQEEKSKGGDQ 380
>gi|169161152 PREDICTED: hypothetical protein [Homo sapiens]
Length = 404
Score = 28.5 bits (62), Expect = 2.3
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Query: 20 LYTRDGQLLVGDPVADNCCAEKICILPNRG--LARTKVPIFLGIQGGSRCLACVETEEGP 77
L R L+VG A+ AE + L R LAR + P+ + + LA V + GP
Sbjct: 304 LLARVDALVVGQMRAE---AEGLAALGARVGLLARVQAPVLEQVGAPAEALAAVGAQVGP 360
Query: 78 --SLQLEDVNIEELYKGGEE 95
+Q + V EE KGG++
Sbjct: 361 LARVQAQVVGQEEKSKGGDQ 380
>gi|239755589 PREDICTED: hypothetical protein [Homo sapiens]
Length = 356
Score = 26.9 bits (58), Expect = 6.7
Identities = 14/46 (30%), Positives = 21/46 (45%)
Query: 105 SSGSAFRLEAAAWPGWFLCGPAEPQQPVQLTKESEPSARTKFYFEQ 150
SS S+ L ++AWPG P Q + +P+A T + Q
Sbjct: 235 SSESSSELSSSAWPGTIWTSTLSPGQRLPTPPPPDPAALTSWGLPQ 280
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.136 0.430
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,434,866
Number of Sequences: 37866
Number of extensions: 284981
Number of successful extensions: 641
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 614
Number of HSP's gapped (non-prelim): 25
length of query: 152
length of database: 18,247,518
effective HSP length: 93
effective length of query: 59
effective length of database: 14,725,980
effective search space: 868832820
effective search space used: 868832820
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.