Guide to the Human Genome
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Name: RIC8A Sequence: fasta or formatted (537aa) NCBI GI: 27883866
Description:

resistance to inhibitors of cholinesterase 8 homolog A

Referenced in:

Additional Brain Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         37           2
 C cysteine            1.7          9           1
 D aspartate           6.1         33           2
 E glutamate           9.3         50           2
 F phenylalanine       3.2         17           2
 G glycine             5.0         27           2
 H histidine           2.6         14           1
 I isoleucine          2.4         13           1
 K lysine              3.9         21           1
 L leucine            13.8         74           2
 M methionine          3.7         20           1
 N asparagine          2.4         13           1
 P proline             6.0         32           3
 Q glutamine           4.1         22           2
 R arginine            7.4         40           1
 S serine              6.0         32           2
 T threonine           5.8         31           1
 V valine              7.8         42           2
 W tryptophan          0.4          2           1
 Y tyrosine            1.5          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   resistance to inhibitors of cholinesterase 8 homolog... 
RIC8B                 0.360   resistance to inhibitors of cholinesterase 8 homolog...
ANP32E                0.008   acidic (leucine-rich) nuclear phosphoprotein 32 fami...
ANP32E                0.008   acidic (leucine-rich) nuclear phosphoprotein 32 fam...
ANP32E                0.008   acidic (leucine-rich) nuclear phosphoprotein 32 fam...
DAXX                  0.007   death-domain associated protein isoform a 
DAXX                  0.007   death-domain associated protein isoform a 
DAXX                  0.007   death-domain associated protein isoform b 
GTF2A1                0.007   TFIIA alpha, p55 isoform 2 
GTF2A1                0.007   TFIIA alpha, p55 isoform 1 
PLCH2                 0.006   phospholipase C, eta 2 
BIRC3                 0.006   baculoviral IAP repeat-containing protein 3 
BIRC3                 0.006   baculoviral IAP repeat-containing protein 3 
FUSSEL18              0.005   PREDICTED: functional smad suppressing element 18 [...
FUSSEL18              0.005   PREDICTED: functional smad suppressing element 18 [...
FUSSEL18              0.005   PREDICTED: functional smad suppressing element 18 [...
CCDC88C               0.005   DVL-binding protein DAPLE 
RABEP1                0.005   rabaptin, RAB GTPase binding effector protein 1 iso...
SUDS3                 0.005   suppressor of defective silencing 3 
DYNC1I2               0.005   dynein, cytoplasmic 1, intermediate chain 2 
IL17RA                0.004   interleukin 17A receptor precursor 
SFRS18                0.004   splicing factor, arginine/serine-rich 130 
SFRS18                0.004   splicing factor, arginine/serine-rich 130 
SMTNL1                0.004   smoothelin-like 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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