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Search of human proteins with 27734871
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|27734871 regulatory factor X, 6 [Homo sapiens]
(928 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|27734871 regulatory factor X, 6 [Homo sapiens] 1886 0.0
gi|47132527 regulatory factor X4 isoform c [Homo sapiens] 433 e-121
gi|15011898 regulatory factor X4 isoform b [Homo sapiens] 427 e-119
gi|19743886 regulatory factor X4 isoform a [Homo sapiens] 332 1e-90
gi|19743879 regulatory factor X2 isoform b [Homo sapiens] 249 6e-66
gi|19743881 regulatory factor X2 isoform a [Homo sapiens] 247 3e-65
gi|4506495 regulatory factor X3 isoform a [Homo sapiens] 247 3e-65
gi|19743884 regulatory factor X3 isoform b [Homo sapiens] 247 3e-65
gi|238859557 regulatory factor X1 [Homo sapiens] 242 1e-63
gi|224586784 hypothetical protein LOC731220 [Homo sapiens] 104 4e-22
gi|148613886 regulatory factor X domain containing 2 [Homo sapiens] 54 7e-07
gi|71040090 regulatory factor X, 5 [Homo sapiens] 52 2e-06
gi|4557843 regulatory factor X, 5 [Homo sapiens] 52 2e-06
gi|38373671 SEC24-related protein C [Homo sapiens] 41 0.006
gi|38373669 SEC24-related protein C [Homo sapiens] 41 0.006
gi|171543895 ataxin 2 [Homo sapiens] 37 0.11
gi|48255900 SWI/SNF-related matrix-associated actin-dependent re... 36 0.19
gi|48255898 SWI/SNF-related matrix-associated actin-dependent re... 36 0.19
gi|47132519 Ras association and pleckstrin homology domains 1 is... 36 0.19
gi|212276104 leucine rich repeat (in FLII) interacting protein 1... 35 0.32
gi|212276096 leucine rich repeat (in FLII) interacting protein 1... 35 0.32
gi|212276070 leucine rich repeat (in FLII) interacting protein 1... 35 0.32
gi|59710093 G-protein coupled receptor 112 [Homo sapiens] 35 0.42
gi|226442893 jumonji domain containing 2C isoform 3 [Homo sapiens] 34 0.72
gi|21361116 versican isoform 1 [Homo sapiens] 34 0.72
gi|226442897 jumonji domain containing 2C isoform 4 [Homo sapiens] 34 0.72
gi|226442889 jumonji domain containing 2C isoform 2 [Homo sapiens] 34 0.72
gi|109255247 jumonji domain containing 2C isoform 1 [Homo sapiens] 34 0.72
gi|4503249 DEK oncogene isoform 1 [Homo sapiens] 34 0.72
gi|28558973 mediator complex subunit 14 [Homo sapiens] 34 0.72
>gi|27734871 regulatory factor X, 6 [Homo sapiens]
Length = 928
Score = 1886 bits (4885), Expect = 0.0
Identities = 928/928 (100%), Positives = 928/928 (100%)
Query: 1 MAKVPKLEDTFLQAQPAPQLSPGIQEDCCVQLLGKGLLVYPEETVYLAAEGQPGGEQGGG 60
MAKVPKLEDTFLQAQPAPQLSPGIQEDCCVQLLGKGLLVYPEETVYLAAEGQPGGEQGGG
Sbjct: 1 MAKVPKLEDTFLQAQPAPQLSPGIQEDCCVQLLGKGLLVYPEETVYLAAEGQPGGEQGGG 60
Query: 61 EKGEDPELPGAVKSEMHLNNGNFSSEEEDADNHDSKTKAADQYLSQKKTITQIVKDKKKQ 120
EKGEDPELPGAVKSEMHLNNGNFSSEEEDADNHDSKTKAADQYLSQKKTITQIVKDKKKQ
Sbjct: 61 EKGEDPELPGAVKSEMHLNNGNFSSEEEDADNHDSKTKAADQYLSQKKTITQIVKDKKKQ 120
Query: 121 TQLTLQWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKTIRQKFPLLTTR 180
TQLTLQWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKTIRQKFPLLTTR
Sbjct: 121 TQLTLQWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKTIRQKFPLLTTR 180
Query: 181 RLGTRGHSKYHYYGIGIKESSAYYHSVYSGKGLTRFSGSKLKNEGGFTRKYSLSSKTGTL 240
RLGTRGHSKYHYYGIGIKESSAYYHSVYSGKGLTRFSGSKLKNEGGFTRKYSLSSKTGTL
Sbjct: 181 RLGTRGHSKYHYYGIGIKESSAYYHSVYSGKGLTRFSGSKLKNEGGFTRKYSLSSKTGTL 240
Query: 241 LPEFPSAQHLVYQGCISKDKVDTLIMMYKTHCQCILDNAINGNFEEIQHFLLHFWQGMPD 300
LPEFPSAQHLVYQGCISKDKVDTLIMMYKTHCQCILDNAINGNFEEIQHFLLHFWQGMPD
Sbjct: 241 LPEFPSAQHLVYQGCISKDKVDTLIMMYKTHCQCILDNAINGNFEEIQHFLLHFWQGMPD 300
Query: 301 HLLPLLENPVIIDIFCVCDSILYKVLTDVLIPATMQEMPESLLADIRNFAKNWEQWVVSS 360
HLLPLLENPVIIDIFCVCDSILYKVLTDVLIPATMQEMPESLLADIRNFAKNWEQWVVSS
Sbjct: 301 HLLPLLENPVIIDIFCVCDSILYKVLTDVLIPATMQEMPESLLADIRNFAKNWEQWVVSS 360
Query: 361 LENLPEALTDKKIPIVRRFVSSLKRQTSFLHLAQIARPALFDQHVVNSMVSDIERVDLNS 420
LENLPEALTDKKIPIVRRFVSSLKRQTSFLHLAQIARPALFDQHVVNSMVSDIERVDLNS
Sbjct: 361 LENLPEALTDKKIPIVRRFVSSLKRQTSFLHLAQIARPALFDQHVVNSMVSDIERVDLNS 420
Query: 421 IGSQALLTISGSTDTESGIYTEHDSITVFQELKDLLKKNATVEAFIEWLDTVVEQRVIKT 480
IGSQALLTISGSTDTESGIYTEHDSITVFQELKDLLKKNATVEAFIEWLDTVVEQRVIKT
Sbjct: 421 IGSQALLTISGSTDTESGIYTEHDSITVFQELKDLLKKNATVEAFIEWLDTVVEQRVIKT 480
Query: 481 SKQNGRSLKKRAQDFLLKWSFFGARVMHNLTLNNASSFGSFHLIRMLLDEYILLAMETQF 540
SKQNGRSLKKRAQDFLLKWSFFGARVMHNLTLNNASSFGSFHLIRMLLDEYILLAMETQF
Sbjct: 481 SKQNGRSLKKRAQDFLLKWSFFGARVMHNLTLNNASSFGSFHLIRMLLDEYILLAMETQF 540
Query: 541 NNDKEQELQNLLDKYMKNSDASKAAFTASPSSCFLANRNKGSMVSSDAVKNESHVETTYL 600
NNDKEQELQNLLDKYMKNSDASKAAFTASPSSCFLANRNKGSMVSSDAVKNESHVETTYL
Sbjct: 541 NNDKEQELQNLLDKYMKNSDASKAAFTASPSSCFLANRNKGSMVSSDAVKNESHVETTYL 600
Query: 601 PLPSSQPGGLGPALHQFPAGNTDNMPLTGQMELSQIAGHLMTPPISPAMASRGSVINQGP 660
PLPSSQPGGLGPALHQFPAGNTDNMPLTGQMELSQIAGHLMTPPISPAMASRGSVINQGP
Sbjct: 601 PLPSSQPGGLGPALHQFPAGNTDNMPLTGQMELSQIAGHLMTPPISPAMASRGSVINQGP 660
Query: 661 MAGRPPSVGPVLSAPSHCSTYPEPIYPALPQANHDFYSTSSNYQTVFRAQPHSTSGLYPH 720
MAGRPPSVGPVLSAPSHCSTYPEPIYPALPQANHDFYSTSSNYQTVFRAQPHSTSGLYPH
Sbjct: 661 MAGRPPSVGPVLSAPSHCSTYPEPIYPALPQANHDFYSTSSNYQTVFRAQPHSTSGLYPH 720
Query: 721 HTEHGRCMAWTEQQLSRDFFSGSCAGSPYNSRPPSSYGPSLQAQDSHNMQFLNTGSFNFL 780
HTEHGRCMAWTEQQLSRDFFSGSCAGSPYNSRPPSSYGPSLQAQDSHNMQFLNTGSFNFL
Sbjct: 721 HTEHGRCMAWTEQQLSRDFFSGSCAGSPYNSRPPSSYGPSLQAQDSHNMQFLNTGSFNFL 780
Query: 781 SNTGAASCQGATLPPNSPNGYYGSNINYPESHRLGSMVNQHVSVISSIRSLPPYSDIHDP 840
SNTGAASCQGATLPPNSPNGYYGSNINYPESHRLGSMVNQHVSVISSIRSLPPYSDIHDP
Sbjct: 781 SNTGAASCQGATLPPNSPNGYYGSNINYPESHRLGSMVNQHVSVISSIRSLPPYSDIHDP 840
Query: 841 LNILDDSGRKQTSSFYTDTSSPVACRTPVLASSLQTPIPSSSSQCMYGTSNQYPAQETLD 900
LNILDDSGRKQTSSFYTDTSSPVACRTPVLASSLQTPIPSSSSQCMYGTSNQYPAQETLD
Sbjct: 841 LNILDDSGRKQTSSFYTDTSSPVACRTPVLASSLQTPIPSSSSQCMYGTSNQYPAQETLD 900
Query: 901 SHGTSSREMVSSLPPINTVFMGTAAGGT 928
SHGTSSREMVSSLPPINTVFMGTAAGGT
Sbjct: 901 SHGTSSREMVSSLPPINTVFMGTAAGGT 928
>gi|47132527 regulatory factor X4 isoform c [Homo sapiens]
Length = 735
Score = 433 bits (1114), Expect = e-121
Identities = 249/603 (41%), Positives = 334/603 (55%), Gaps = 34/603 (5%)
Query: 117 KKKQTQLTLQWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKTIRQKFPL 176
K T TLQWLEENY + EGVC+PR LY HYLDFC K +P AA+FGK IRQ+FP
Sbjct: 54 KPHSTPATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQFPQ 113
Query: 177 LTTRRLGTRGHSKYHYYGIGIKESSAYYHSVYSGKGLTRFSGSKLKNEGGFTRKYSLSSK 236
LTTRRLGTRG SKYHYYGI +KESS YY +YS KG S + K T YS SK
Sbjct: 114 LTTRRLGTRGQSKYHYYGIAVKESSQYYDVMYSKKGAAWVSETGKKEVSKQTVAYSPRSK 173
Query: 237 TGTLLPEFPSAQHLVYQGCISKDKVDTLIMMYKTHCQCILDNAINGNFEEIQHFLLHFWQ 296
GTLLPEFP+ + L + ++KV T IMMY+THCQ ILD I NF+E+Q FLLHFWQ
Sbjct: 174 LGTLLPEFPNVKDLNLPASLPEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQ 233
Query: 297 GMPDHLLPLLENPVIIDIFCVCDSILYKVLTDVLIPATMQEMPESLLADIRNFAKNWEQW 356
GMP H+LP+L + +++I VCDSILYK ++ VL+P +Q +P+SL IR FAK ++W
Sbjct: 234 GMPPHMLPVLGSSTVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEW 293
Query: 357 VVSSLENLPEALTDKKIPIVRRFVSSLKRQTSFLHLAQIARPALFDQHVVNSMVSDIERV 416
+ +L +LPE L + K + RRF L+RQTS HL Q +R + + M+ D V
Sbjct: 294 LKVALHDLPENLRNIKFELSRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNV 353
Query: 417 DLNSIGSQALLTISGSTDTESGIYTEHDSITVFQELKDLLKKNATVEAFIEWLDTVVEQR 476
DLNSI Q L T+ S D + T+ ++QE LL++ + +E++IEWLDT+V++
Sbjct: 354 DLNSITKQTLYTMEDSRDEHRKLITQ-----LYQEFDHLLEEQSPIESYIEWLDTMVDRC 408
Query: 477 VIKTSKQNGRSLKKRAQDFLLKWSFFGARVMHNLTLNNASSFGSFHLIRMLLDEYILLAM 536
V+K + + SLKK AQ FLL WS FG RV+ ++TL++A SFGSFHLI ++ D+Y+L +
Sbjct: 409 VVKVAAKRQGSLKKVAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLL 468
Query: 537 ETQFNNDKEQELQNLLDKYMKNSDASKAAFTASPSSCFLANRNKGSMVSSDAVKNESHVE 596
E+ ++ EL + + S A A + S K+ + VE
Sbjct: 469 ESLHCQERANELMRAM-----KGEGSTAEVREEIILTEAAAPTPSPVPSFSPAKSATSVE 523
Query: 597 TTYLPLPSSQPGGLGPALHQFPAGNTDNMPLTGQMELSQIAGHLMTPPISPAMASRGSVI 656
+P PSS P+ + TG M Q +T ++ A S
Sbjct: 524 ---VPPPSSPVSN--------PSPEYTGLSTTGAM---QSYTWSLTYTVTTAAGSPAENS 569
Query: 657 NQGPMAGRPPSVGPVLSAPSHCSTYPEPIYPALPQANHDFYSTSSNYQTVFRAQPHSTSG 716
Q P PS T+ P+Y P Y+ S NY + PH
Sbjct: 570 QQLPCMRN-------THVPSSSVTHRIPVY---PHREEHGYTGSYNYGSYGNQHPHPMQS 619
Query: 717 LYP 719
YP
Sbjct: 620 QYP 622
>gi|15011898 regulatory factor X4 isoform b [Homo sapiens]
Length = 563
Score = 427 bits (1098), Expect = e-119
Identities = 214/436 (49%), Positives = 285/436 (65%), Gaps = 5/436 (1%)
Query: 117 KKKQTQLTLQWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKTIRQKFPL 176
K T TLQWLEENY + EGVC+PR LY HYLDFC K +P AA+FGK IRQ+FP
Sbjct: 63 KPHSTPATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQFPQ 122
Query: 177 LTTRRLGTRGHSKYHYYGIGIKESSAYYHSVYSGKGLTRFSGSKLKNEGGFTRKYSLSSK 236
LTTRRLGTRG SKYHYYGI +KESS YY +YS KG S + K T YS SK
Sbjct: 123 LTTRRLGTRGQSKYHYYGIAVKESSQYYDVMYSKKGAAWVSETGKKEVSKQTVAYSPRSK 182
Query: 237 TGTLLPEFPSAQHLVYQGCISKDKVDTLIMMYKTHCQCILDNAINGNFEEIQHFLLHFWQ 296
GTLLPEFP+ + L + ++KV T IMMY+THCQ ILD I NF+E+Q FLLHFWQ
Sbjct: 183 LGTLLPEFPNVKDLNLPASLPEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQ 242
Query: 297 GMPDHLLPLLENPVIIDIFCVCDSILYKVLTDVLIPATMQEMPESLLADIRNFAKNWEQW 356
GMP H+LP+L + +++I VCDSILYK ++ VL+P +Q +P+SL IR FAK ++W
Sbjct: 243 GMPPHMLPVLGSSTVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEW 302
Query: 357 VVSSLENLPEALTDKKIPIVRRFVSSLKRQTSFLHLAQIARPALFDQHVVNSMVSDIERV 416
+ +L +LPE L + K + RRF L+RQTS HL Q +R + + M+ D V
Sbjct: 303 LKVALHDLPENLRNIKFELSRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNV 362
Query: 417 DLNSIGSQALLTISGSTDTESGIYTEHDSITVFQELKDLLKKNATVEAFIEWLDTVVEQR 476
DLNSI Q L T+ S D + T+ ++QE LL++ + +E++IEWLDT+V++
Sbjct: 363 DLNSITKQTLYTMEDSRDEHRKLITQ-----LYQEFDHLLEEQSPIESYIEWLDTMVDRC 417
Query: 477 VIKTSKQNGRSLKKRAQDFLLKWSFFGARVMHNLTLNNASSFGSFHLIRMLLDEYILLAM 536
V+K + + SLKK AQ FLL WS FG RV+ ++TL++A SFGSFHLI ++ D+Y+L +
Sbjct: 418 VVKVAAKRQGSLKKVAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLL 477
Query: 537 ETQFNNDKEQELQNLL 552
E+ ++ EL +
Sbjct: 478 ESLHCQERANELMRAM 493
>gi|19743886 regulatory factor X4 isoform a [Homo sapiens]
Length = 641
Score = 332 bits (851), Expect = 1e-90
Identities = 200/530 (37%), Positives = 280/530 (52%), Gaps = 34/530 (6%)
Query: 190 YHYYGIGIKESSAYYHSVYSGKGLTRFSGSKLKNEGGFTRKYSLSSKTGTLLPEFPSAQH 249
YHYYGI +KESS YY +YS KG S + K T YS SK GTLLPEFP+ +
Sbjct: 33 YHYYGIAVKESSQYYDVMYSKKGAAWVSETGKKEVSKQTVAYSPRSKLGTLLPEFPNVKD 92
Query: 250 LVYQGCISKDKVDTLIMMYKTHCQCILDNAINGNFEEIQHFLLHFWQGMPDHLLPLLENP 309
L + ++KV T IMMY+THCQ ILD I NF+E+Q FLLHFWQGMP H+LP+L +
Sbjct: 93 LNLPASLPEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHMLPVLGSS 152
Query: 310 VIIDIFCVCDSILYKVLTDVLIPATMQEMPESLLADIRNFAKNWEQWVVSSLENLPEALT 369
+++I VCDSILYK ++ VL+P +Q +P+SL IR FAK ++W+ +L +LPE L
Sbjct: 153 TVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLR 212
Query: 370 DKKIPIVRRFVSSLKRQTSFLHLAQIARPALFDQHVVNSMVSDIERVDLNSIGSQALLTI 429
+ K + RRF L+RQTS HL Q +R + + M+ D VDLNSI Q L T+
Sbjct: 213 NIKFELSRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTM 272
Query: 430 SGSTDTESGIYTEHDSITVFQELKDLLKKNATVEAFIEWLDTVVEQRVIKTSKQNGRSLK 489
S D + T+ ++QE LL++ + +E++IEWLDT+V++ V+K + + SLK
Sbjct: 273 EDSRDEHRKLITQ-----LYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLK 327
Query: 490 KRAQDFLLKWSFFGARVMHNLTLNNASSFGSFHLIRMLLDEYILLAMETQFNNDKEQELQ 549
K AQ FLL WS FG RV+ ++TL++A SFGSFHLI ++ D+Y+L +E+ ++ EL
Sbjct: 328 KVAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANELM 387
Query: 550 NLLDKYMKNSDASKAAFTASPSSCFLANRNKGSMVSSDAVKNESHVETTYLPLPSSQPGG 609
+ + S A A + S K+ + VE +P PSS
Sbjct: 388 RAM-----KGEGSTAEVREEIILTEAAAPTPSPVPSFSPAKSATSVE---VPPPSSPVSN 439
Query: 610 LGPALHQFPAGNTDNMPLTGQMELSQIAGHLMTPPISPAMASRGSVINQGPMAGRPPSVG 669
P+ + TG M Q +T ++ A S Q P
Sbjct: 440 --------PSPEYTGLSTTGAM---QSYTWSLTYTVTTAAGSPAENSQQLPCMRN----- 483
Query: 670 PVLSAPSHCSTYPEPIYPALPQANHDFYSTSSNYQTVFRAQPHSTSGLYP 719
PS T+ P+Y P Y+ S NY + PH YP
Sbjct: 484 --THVPSSSVTHRIPVY---PHREEHGYTGSYNYGSYGNQHPHPMQSQYP 528
>gi|19743879 regulatory factor X2 isoform b [Homo sapiens]
Length = 698
Score = 249 bits (637), Expect = 6e-66
Identities = 158/472 (33%), Positives = 238/472 (50%), Gaps = 64/472 (13%)
Query: 119 KQTQLTLQWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKTIRQKFPLLT 178
+ + TLQWL +NY EGV LPR LY HYL C++ KL+P AA+FGK IR F L
Sbjct: 169 RSSPATLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAASFGKLIRSVFMGLR 228
Query: 179 TRRLGTRGHSKYHYYGIGIKESSAYYHSVYSGKGLT----------RFSGSK----LKNE 224
TRRLGTRG+SKYHYYGI +K S + + R+ ++ L +
Sbjct: 229 TRRLGTRGNSKYHYYGIRLKPDSPLNRLQEDTQYMAMRQQPMHQKPRYRPAQKTDSLGDS 288
Query: 225 GGFTRKYSLSSKT--------------GTLLPEFPSAQ--HLVYQGCISKDKVDTLIMMY 268
G + +S +T + PEFP+ + Q ++ V L ++Y
Sbjct: 289 GSHSGLHSTPEQTMAVQSQHHQQYIDVSHVFPEFPAPDLGSFLLQDGVTLHDVKALQLVY 348
Query: 269 KTHCQCILDNAINGNFEEIQHFLLHFWQGMP-----------------------DHLLPL 305
+ HC+ +D +N F I+ L FW D L+ L
Sbjct: 349 RRHCEATVDVVMNLQFHYIEKLWLSFWNSKASSSDGPTSLPASDEDPEGAVLPKDKLISL 408
Query: 306 LENPVIIDIFCVCDSILYKVLTDVLIPATMQEMPESLLADIRNFAKNWEQWVVSSLENLP 365
+ I+ CD ILY+ L ++LIP ++ +P +L IRNFAK+ E W+ +++ + P
Sbjct: 409 CQCDPILRWMRSCDHILYQALVEILIPDVLRPVPSTLTQAIRNFAKSLEGWLTNAMSDFP 468
Query: 366 EALTDKKIPIVRRFVSSLKRQTSFLHLAQIARPALFDQHVVNSMVSDIERVDLNSIGSQA 425
+ + K+ +V F +L+R TS HLAQ AR L + +N M+SD+ RVD ++ QA
Sbjct: 469 QQVIQTKVGVVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQA 528
Query: 426 LLTISGSTDTESGIYTEHDSITVFQELKDLLKKNATVEAFIEWLDTVVEQRVIKTSKQNG 485
S E + + Q+ K L++ ++++ + WLD+VV Q +
Sbjct: 529 ----SWVCQCEESVVQRLE-----QDFKLTLQQQSSLDQWASWLDSVVTQ--VLKQHAGS 577
Query: 486 RSLKKRAQDFLLKWSFFGARVMHNLTLNNASSFGSFHLIRMLLDEYILLAME 537
S K A+ FLLKWSF+ + V+ +LTL +A+SFGSFHLIR+L DEY+ +E
Sbjct: 578 PSFPKAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVE 629
>gi|19743881 regulatory factor X2 isoform a [Homo sapiens]
Length = 723
Score = 247 bits (631), Expect = 3e-65
Identities = 157/466 (33%), Positives = 235/466 (50%), Gaps = 64/466 (13%)
Query: 125 LQWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKTIRQKFPLLTTRRLGT 184
LQWL +NY EGV LPR LY HYL C++ KL+P AA+FGK IR F L TRRLGT
Sbjct: 200 LQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAASFGKLIRSVFMGLRTRRLGT 259
Query: 185 RGHSKYHYYGIGIKESSAYYHSVYSGKGLT----------RFSGSK----LKNEGGFTRK 230
RG+SKYHYYGI +K S + + R+ ++ L + G +
Sbjct: 260 RGNSKYHYYGIRLKPDSPLNRLQEDTQYMAMRQQPMHQKPRYRPAQKTDSLGDSGSHSGL 319
Query: 231 YSLSSKT--------------GTLLPEFPSAQ--HLVYQGCISKDKVDTLIMMYKTHCQC 274
+S +T + PEFP+ + Q ++ V L ++Y+ HC+
Sbjct: 320 HSTPEQTMAVQSQHHQQYIDVSHVFPEFPAPDLGSFLLQDGVTLHDVKALQLVYRRHCEA 379
Query: 275 ILDNAINGNFEEIQHFLLHFWQGMP-----------------------DHLLPLLENPVI 311
+D +N F I+ L FW D L+ L + I
Sbjct: 380 TVDVVMNLQFHYIEKLWLSFWNSKASSSDGPTSLPASDEDPEGAVLPKDKLISLCQCDPI 439
Query: 312 IDIFCVCDSILYKVLTDVLIPATMQEMPESLLADIRNFAKNWEQWVVSSLENLPEALTDK 371
+ CD ILY+ L ++LIP ++ +P +L IRNFAK+ E W+ +++ + P+ +
Sbjct: 440 LRWMRSCDHILYQALVEILIPDVLRPVPSTLTQAIRNFAKSLEGWLTNAMSDFPQQVIQT 499
Query: 372 KIPIVRRFVSSLKRQTSFLHLAQIARPALFDQHVVNSMVSDIERVDLNSIGSQALLTISG 431
K+ +V F +L+R TS HLAQ AR L + +N M+SD+ RVD ++ QA S
Sbjct: 500 KVGVVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQA----SW 555
Query: 432 STDTESGIYTEHDSITVFQELKDLLKKNATVEAFIEWLDTVVEQRVIKTSKQNGRSLKKR 491
E + + Q+ K L++ ++++ + WLD+VV Q + S K
Sbjct: 556 VCQCEESVVQRLE-----QDFKLTLQQQSSLDQWASWLDSVVTQ--VLKQHAGSPSFPKA 608
Query: 492 AQDFLLKWSFFGARVMHNLTLNNASSFGSFHLIRMLLDEYILLAME 537
A+ FLLKWSF+ + V+ +LTL +A+SFGSFHLIR+L DEY+ +E
Sbjct: 609 ARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVE 654
>gi|4506495 regulatory factor X3 isoform a [Homo sapiens]
Length = 707
Score = 247 bits (631), Expect = 3e-65
Identities = 158/468 (33%), Positives = 231/468 (49%), Gaps = 67/468 (14%)
Query: 125 LQWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKTIRQKFPLLTTRRLGT 184
LQWL +NY EGV LPR LY HYL C++ KL+P AA+FGK IR F L TRRLGT
Sbjct: 184 LQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHKLDPVNAASFGKLIRSIFMGLRTRRLGT 243
Query: 185 RGHSKYHYYGIGIKESSAY----------------------YHSVYSGKGLTR-FSGSKL 221
RG+SKYHYYGI +K S Y + G+ F+GS
Sbjct: 244 RGNSKYHYYGIRVKPDSPLNRLQEDMQYMAMRQQPMQQKQRYKPMQKVDGVADGFTGSGQ 303
Query: 222 KNEGGFTRKYSLSSK-------TGTLLPEFPSAQHLVYQGCISKDKVDTLIMMYKTHCQC 274
+ + S+ LPEF + + + + +L +Y+ HC+
Sbjct: 304 QTGTSVEQTVIAQSQHHQQFLDASRALPEFGEVEISSLPDGTTFEDIKSLQSLYREHCEA 363
Query: 275 ILDNAINGNFEEIQHFLLHFWQGMPD------------------------HLLPLLENPV 310
ILD +N F I+ FW+ P L+ L ++
Sbjct: 364 ILDVVVNLQFSLIEKLWQTFWRYSPSTPTDGTTITESSNLSEIESRLPKAKLITLCKHES 423
Query: 311 IIDIFCVCDSILYKVLTDVLIPATMQEMPESLLADIRNFAKNWEQWVVSSLENLPEALTD 370
I+ C CD +Y+ L ++LIP ++ +P +L IRNFAK+ E W+ +++ N+P+ +
Sbjct: 424 ILKWMCNCDHGMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLSNAMNNIPQRMIQ 483
Query: 371 KKIPIVRRFVSSLKRQTSFLHLAQIARPALFDQHVVNSMVSDIERVDLNSIGSQALLTIS 430
K+ V F +L+R TS HLAQ AR L + +N M+SD+ RVD ++ QA
Sbjct: 484 TKVAAVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASWVCQ 543
Query: 431 GSTDTESGIYTEHDSITVFQELKDLLKKNATVEAFIEWLDTVVEQRVIKTSKQNGR-SLK 489
+ + T + K L++ +T+E + WLD V+ Q + GR S
Sbjct: 544 CDDNMVQRLET---------DFKMTLQQQSTLEQWAAWLDNVMMQAL---KPYEGRPSFP 591
Query: 490 KRAQDFLLKWSFFGARVMHNLTLNNASSFGSFHLIRMLLDEYILLAME 537
K A+ FLLKWSF+ + V+ +LTL +A+SFGSFHLIR+L DEY+ +E
Sbjct: 592 KAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVE 639
>gi|19743884 regulatory factor X3 isoform b [Homo sapiens]
Length = 749
Score = 247 bits (631), Expect = 3e-65
Identities = 158/468 (33%), Positives = 231/468 (49%), Gaps = 67/468 (14%)
Query: 125 LQWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKTIRQKFPLLTTRRLGT 184
LQWL +NY EGV LPR LY HYL C++ KL+P AA+FGK IR F L TRRLGT
Sbjct: 184 LQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHKLDPVNAASFGKLIRSIFMGLRTRRLGT 243
Query: 185 RGHSKYHYYGIGIKESSAY----------------------YHSVYSGKGLTR-FSGSKL 221
RG+SKYHYYGI +K S Y + G+ F+GS
Sbjct: 244 RGNSKYHYYGIRVKPDSPLNRLQEDMQYMAMRQQPMQQKQRYKPMQKVDGVADGFTGSGQ 303
Query: 222 KNEGGFTRKYSLSSK-------TGTLLPEFPSAQHLVYQGCISKDKVDTLIMMYKTHCQC 274
+ + S+ LPEF + + + + +L +Y+ HC+
Sbjct: 304 QTGTSVEQTVIAQSQHHQQFLDASRALPEFGEVEISSLPDGTTFEDIKSLQSLYREHCEA 363
Query: 275 ILDNAINGNFEEIQHFLLHFWQGMPD------------------------HLLPLLENPV 310
ILD +N F I+ FW+ P L+ L ++
Sbjct: 364 ILDVVVNLQFSLIEKLWQTFWRYSPSTPTDGTTITESSNLSEIESRLPKAKLITLCKHES 423
Query: 311 IIDIFCVCDSILYKVLTDVLIPATMQEMPESLLADIRNFAKNWEQWVVSSLENLPEALTD 370
I+ C CD +Y+ L ++LIP ++ +P +L IRNFAK+ E W+ +++ N+P+ +
Sbjct: 424 ILKWMCNCDHGMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLSNAMNNIPQRMIQ 483
Query: 371 KKIPIVRRFVSSLKRQTSFLHLAQIARPALFDQHVVNSMVSDIERVDLNSIGSQALLTIS 430
K+ V F +L+R TS HLAQ AR L + +N M+SD+ RVD ++ QA
Sbjct: 484 TKVAAVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASWVCQ 543
Query: 431 GSTDTESGIYTEHDSITVFQELKDLLKKNATVEAFIEWLDTVVEQRVIKTSKQNGR-SLK 489
+ + T + K L++ +T+E + WLD V+ Q + GR S
Sbjct: 544 CDDNMVQRLET---------DFKMTLQQQSTLEQWAAWLDNVMMQAL---KPYEGRPSFP 591
Query: 490 KRAQDFLLKWSFFGARVMHNLTLNNASSFGSFHLIRMLLDEYILLAME 537
K A+ FLLKWSF+ + V+ +LTL +A+SFGSFHLIR+L DEY+ +E
Sbjct: 592 KAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVE 639
>gi|238859557 regulatory factor X1 [Homo sapiens]
Length = 979
Score = 242 bits (618), Expect = 1e-63
Identities = 159/468 (33%), Positives = 236/468 (50%), Gaps = 68/468 (14%)
Query: 124 TLQWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKTIRQKFPLLTTRRLG 183
T+QWL +NY EGV LPR LY HYL C+++KLEP AA+FGK IR F L TRRLG
Sbjct: 438 TVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKLIRSVFMGLRTRRLG 497
Query: 184 TRGHSKYHYYGIGIKESSA-------YYHSVYSGKGLTRFSGSK-LKNEGGFTRKYSLSS 235
TRG+SKYHYYG+ IK SS H G+ ++ K ++ G T ++
Sbjct: 498 TRGNSKYHYYGLRIKASSPLLRLMEDQQHMAMRGQPFSQKQRLKPIQKMEGMTNGVAVGQ 557
Query: 236 KTGTLLPEFPSAQHLVYQGCISKDK-----------------------VDTLIMMYKTHC 272
+ T L + SAQ YQ + + + ++Y+ HC
Sbjct: 558 QPSTGLSDI-SAQVQQYQQFLDASRSLPDFTELDLQGKVLPEGVGPGDIKAFQVLYREHC 616
Query: 273 QCILDNAINGNFEEIQHFLLHFW--------------------QGMPDHLLPLLEN-PVI 311
+ I+D +N F ++ FW + +P +L LL +
Sbjct: 617 EAIVDVMVNLQFTLVETLWKTFWRYNLSQPSEAPPLAVHDEAEKRLPKAILVLLSKFEPV 676
Query: 312 IDIFCVCDSILYKVLTDVLIPATMQEMPESLLADIRNFAKNWEQWVVSSLENLPEALTDK 371
+ CD++LY+ L ++LIP ++ +P +L IRNFAK+ E W+ ++ N+PE +
Sbjct: 677 LQWTKHCDNVLYQGLVEILIPDVLRPIPSALTQAIRNFAKSLESWLTHAMVNIPEEMLRV 736
Query: 372 KIPIVRRFVSSLKRQTSFLHLAQIARPALFDQHVVNSMVSDIERVDLNSIGSQALLTISG 431
K+ F +L+R TS HLAQ AR L + +N M+SD+ RVD ++ QA
Sbjct: 737 KVAAAGAFAQTLRRYTSLNHLAQAARAVLQNTAQINQMLSDLNRVDFANVQEQA------ 790
Query: 432 STDTESGIYTEHDSIT--VFQELKDLLKKNATVEAFIEWLDTVVEQRVIKTSKQNGRSLK 489
S + D + + Q+ K L++ ++E + WLD VV Q + Q
Sbjct: 791 -----SWVCRCEDRVVQRLEQDFKVTLQQQNSLEQWAAWLDGVVSQ--VLKPYQGSAGFP 843
Query: 490 KRAQDFLLKWSFFGARVMHNLTLNNASSFGSFHLIRMLLDEYILLAME 537
K A+ FLLKWSF+ + V+ +LTL +A+SFGSFHLIR+L DEY+ +E
Sbjct: 844 KAAKLFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMYYLIE 891
>gi|224586784 hypothetical protein LOC731220 [Homo sapiens]
Length = 473
Score = 104 bits (259), Expect = 4e-22
Identities = 72/281 (25%), Positives = 141/281 (50%), Gaps = 12/281 (4%)
Query: 268 YKTHCQCILDNAINGNFEEIQHFLLHFWQGMPDHLLPLLENPVIIDIFCVCDSILYKVLT 327
Y +C+ IL N ++ L FW+ + + L+ P + +F D LYK +
Sbjct: 69 YCNYCRDILRN--------VEDLLTSFWKSLQQDTVMLMSLPDVCQLFKCYDVQLYKGIE 120
Query: 328 DVLIPATMQEMPESLLADIRNFAKNWEQWVVSSLENLPEALTDKKIPIVRRFVSSLKRQT 387
DVL+ ++++ L ++ F+K ++ W++++LE +P L K+ V FV L+R+T
Sbjct: 121 DVLLHDFLEDVSIQYLKSVQLFSKKFKLWLLNALEGVPALLQISKLKEVTLFVKRLRRKT 180
Query: 388 SFLHLAQIARPALFDQHVVNSMVSDIERVDLNSIGSQALLTISGSTDTESGIYTEHD-SI 446
++A+ R L + V+ + SD++ + +N G+ A + ++D E++ +
Sbjct: 181 YLSNMAKTMRMVLKSKRRVSVLKSDLQAI-INQ-GTLATSKKALASDRSGADELENNPEM 238
Query: 447 TVFQELKDLLKKNATVEAFIEWLDTVVEQRVIKTSKQNGRSLKKRAQDFLLKWSFFGARV 506
+ L LL + + F+ L + ++ V +TS+ K A F L+W+ V
Sbjct: 239 KCLRNLISLLGTSTDLRVFLSCLSSHLQAFVFQTSRSK-EEFTKLAASFQLRWNLLLTAV 297
Query: 507 MHNLTLNNASSFGSFHLIRMLLDEYILLAMETQFNNDKEQE 547
+TL + SFGS+HL +LL EY++ +++ ++E+E
Sbjct: 298 SKAMTLCHRDSFGSWHLFHLLLLEYMIHILQSCLEEEEEEE 338
>gi|148613886 regulatory factor X domain containing 2 [Homo sapiens]
Length = 1460
Score = 53.9 bits (128), Expect = 7e-07
Identities = 28/89 (31%), Positives = 40/89 (44%)
Query: 107 KKTITQIVKDKKKQTQLTLQWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATF 166
+K+ + + Q W+ LP+ +Y Y +C P AA F
Sbjct: 91 EKSDQNAMSSSRAQQMHAFSWIRNTLEEHPETSLPKQEVYDEYKSYCDNLGYHPLSAADF 150
Query: 167 GKTIRQKFPLLTTRRLGTRGHSKYHYYGI 195
GK ++ FP + RRLGTRG SKY Y G+
Sbjct: 151 GKIMKNVFPNMKARRLGTRGKSKYCYSGL 179
>gi|71040090 regulatory factor X, 5 [Homo sapiens]
Length = 616
Score = 52.4 bits (124), Expect = 2e-06
Identities = 28/71 (39%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 126 QWLEENYIVCEGVCLPRCILYAHYLDFCRKEKL-EPACAATFGKTIRQKFPLLTTRRLGT 184
+W+ + CLP+ +Y Y +C P A FGK IR+ FP + RRLG
Sbjct: 94 RWIRNHLEEHTDTCLPKQSVYDAYRKYCESLACCRPLSTANFGKIIREIFPDIKARRLGG 153
Query: 185 RGHSKYHYYGI 195
RG SKY Y GI
Sbjct: 154 RGQSKYCYSGI 164
>gi|4557843 regulatory factor X, 5 [Homo sapiens]
Length = 616
Score = 52.4 bits (124), Expect = 2e-06
Identities = 28/71 (39%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 126 QWLEENYIVCEGVCLPRCILYAHYLDFCRKEKL-EPACAATFGKTIRQKFPLLTTRRLGT 184
+W+ + CLP+ +Y Y +C P A FGK IR+ FP + RRLG
Sbjct: 94 RWIRNHLEEHTDTCLPKQSVYDAYRKYCESLACCRPLSTANFGKIIREIFPDIKARRLGG 153
Query: 185 RGHSKYHYYGI 195
RG SKY Y GI
Sbjct: 154 RGQSKYCYSGI 164
>gi|38373671 SEC24-related protein C [Homo sapiens]
Length = 1094
Score = 40.8 bits (94), Expect = 0.006
Identities = 44/164 (26%), Positives = 64/164 (39%), Gaps = 11/164 (6%)
Query: 602 LPSSQPGG--LGPALHQFPAGNTDNMPLTGQMELSQIAGHLMTPPISPAMASRGSVINQG 659
LP SQP G L P +Q P P T +Q++G ++ ++PA S G + G
Sbjct: 104 LPGSQPFGSPLAPVGNQPPVLQPYGPPPTSAQVATQLSGMQISGAVAPAPPSSG--LGFG 161
Query: 660 PMAGRPPSVGPVLSAPSHCSTYPEPIYPALPQANHDFYSTSSNYQTVFRAQPHSTSGLYP 719
P + G ++ + +YP+ P L QA QT R+ P S P
Sbjct: 162 PPTSLASASGSFPNSGLY-GSYPQGQAPPLSQA-----QGHPGIQTPQRSAPSQASSFTP 215
Query: 720 HHTEHGRCMAWTEQQLSRDFFSGSCAGSP-YNSRPPSSYGPSLQ 762
+ R + T L F G P + S PP + P Q
Sbjct: 216 PASGGPRLPSMTGPLLPGQSFGGPSVSQPNHVSSPPQALPPGTQ 259
>gi|38373669 SEC24-related protein C [Homo sapiens]
Length = 1094
Score = 40.8 bits (94), Expect = 0.006
Identities = 44/164 (26%), Positives = 64/164 (39%), Gaps = 11/164 (6%)
Query: 602 LPSSQPGG--LGPALHQFPAGNTDNMPLTGQMELSQIAGHLMTPPISPAMASRGSVINQG 659
LP SQP G L P +Q P P T +Q++G ++ ++PA S G + G
Sbjct: 104 LPGSQPFGSPLAPVGNQPPVLQPYGPPPTSAQVATQLSGMQISGAVAPAPPSSG--LGFG 161
Query: 660 PMAGRPPSVGPVLSAPSHCSTYPEPIYPALPQANHDFYSTSSNYQTVFRAQPHSTSGLYP 719
P + G ++ + +YP+ P L QA QT R+ P S P
Sbjct: 162 PPTSLASASGSFPNSGLY-GSYPQGQAPPLSQA-----QGHPGIQTPQRSAPSQASSFTP 215
Query: 720 HHTEHGRCMAWTEQQLSRDFFSGSCAGSP-YNSRPPSSYGPSLQ 762
+ R + T L F G P + S PP + P Q
Sbjct: 216 PASGGPRLPSMTGPLLPGQSFGGPSVSQPNHVSSPPQALPPGTQ 259
>gi|171543895 ataxin 2 [Homo sapiens]
Length = 1313
Score = 36.6 bits (83), Expect = 0.11
Identities = 45/177 (25%), Positives = 66/177 (37%), Gaps = 19/177 (10%)
Query: 563 KAAFTASPSSCFLANRNKGSMVSSDAVKNESHVETTYLPLPSSQPGGLGPALHQFPAGNT 622
K + S F + GS+ A N + T P PS+ P G + H G +
Sbjct: 1109 KLPYNKETSPSFYFAISTGSLAQQYAHPNATLHPHTPHPQPSATPTGQQQSQH----GGS 1164
Query: 623 DNMPLTGQMELSQIAG--HLMTPPISPAMASRGSVINQGPMAGRPPSVGPVLSAPSHCST 680
P Q Q A HL +P + S I +A PPS+ P + S ++
Sbjct: 1165 HPAPSPVQHHQHQAAQALHLASP-------QQQSAIYHAGLAPTPPSMTPASNTQSPQNS 1217
Query: 681 YP---EPIYPALPQANHDFYSTSSNYQTVFRAQPHSTSGLYPHH-TEHGRCMAWTEQ 733
+P + ++ P Y+ + V Q H SG+ P H T H M T Q
Sbjct: 1218 FPAAQQTVFTIHPSHVQPAYTNPPHMAHV--PQAHVQSGMVPSHPTAHAPMMLMTTQ 1272
>gi|48255900 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a2 isoform a [Homo sapiens]
Length = 1590
Score = 35.8 bits (81), Expect = 0.19
Identities = 45/195 (23%), Positives = 68/195 (34%), Gaps = 23/195 (11%)
Query: 641 MTPPISPAMASRGSVINQGPMAGRPPSVGPVLSAPSHCSTYPEPIYPALPQANHDFYSTS 700
M+ P P G++ + GP G PS GP+L P P P + H S
Sbjct: 1 MSTPTDP-----GAMPHPGPSPGPGPSPGPILG--------PSPGPGPSPGSVHSMMGPS 47
Query: 701 SNYQTVFRAQPHSTSGLYPH---HTEHGRCMAWTEQQLSRDFFSGSCAGSPYNSRPP-SS 756
+V P S +P H H ++ + D GS G+ RPP
Sbjct: 48 PGPPSVSHPMPTMGSTDFPQEGMHQMHKPIDGIHDKGIVEDIHCGSMKGT--GMRPPHPG 105
Query: 757 YGPSLQAQDSHNMQFL--NTGSFNFLSNTGAASCQGATLPPNSPNGYYGSNINYPESHRL 814
GP D H+ ++ + + + G PP P G+ I P +
Sbjct: 106 MGPPQSPMDQHSQGYMSPHPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGALI--PGDPQA 163
Query: 815 GSMVNQHVSVISSIR 829
S N+ S S ++
Sbjct: 164 MSQPNRGPSPFSPVQ 178
>gi|48255898 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a2 isoform b [Homo sapiens]
Length = 1572
Score = 35.8 bits (81), Expect = 0.19
Identities = 45/195 (23%), Positives = 68/195 (34%), Gaps = 23/195 (11%)
Query: 641 MTPPISPAMASRGSVINQGPMAGRPPSVGPVLSAPSHCSTYPEPIYPALPQANHDFYSTS 700
M+ P P G++ + GP G PS GP+L P P P + H S
Sbjct: 1 MSTPTDP-----GAMPHPGPSPGPGPSPGPILG--------PSPGPGPSPGSVHSMMGPS 47
Query: 701 SNYQTVFRAQPHSTSGLYPH---HTEHGRCMAWTEQQLSRDFFSGSCAGSPYNSRPP-SS 756
+V P S +P H H ++ + D GS G+ RPP
Sbjct: 48 PGPPSVSHPMPTMGSTDFPQEGMHQMHKPIDGIHDKGIVEDIHCGSMKGT--GMRPPHPG 105
Query: 757 YGPSLQAQDSHNMQFL--NTGSFNFLSNTGAASCQGATLPPNSPNGYYGSNINYPESHRL 814
GP D H+ ++ + + + G PP P G+ I P +
Sbjct: 106 MGPPQSPMDQHSQGYMSPHPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGALI--PGDPQA 163
Query: 815 GSMVNQHVSVISSIR 829
S N+ S S ++
Sbjct: 164 MSQPNRGPSPFSPVQ 178
>gi|47132519 Ras association and pleckstrin homology domains 1
isoform 1 [Homo sapiens]
Length = 1250
Score = 35.8 bits (81), Expect = 0.19
Identities = 29/96 (30%), Positives = 36/96 (37%), Gaps = 9/96 (9%)
Query: 601 PLPSSQPGGLGPALHQFPAGNTDNMPLTGQMELSQIAGHLMTPPISPAMASRG-----SV 655
PLPS G A F +T +T SQ +G L PP P M S+ V
Sbjct: 648 PLPSQSAPSAGSAAPMFVKYST----ITRLQNASQHSGALFKPPTPPVMQSQSVKPQILV 703
Query: 656 INQGPMAGRPPSVGPVLSAPSHCSTYPEPIYPALPQ 691
G + PP P + P P P+LPQ
Sbjct: 704 PPNGVVPPPPPPPPPPTPGSAMAQLKPAPCAPSLPQ 739
>gi|212276104 leucine rich repeat (in FLII) interacting protein 1
isoform 5 [Homo sapiens]
Length = 752
Score = 35.0 bits (79), Expect = 0.32
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 42 EETVYLAAEGQPGGEQGGGEKGEDPELPGAVKSEMHLNNGNFSSEEEDADNHDSKTKAAD 101
E+ + G P G +G ++ P S + N +E D + D + +A D
Sbjct: 455 EKPIKTEVPGSPAGTEGNCQEATGP-------STVDTQNEPLDMKEPDEEKSDQQGEALD 507
Query: 102 QYLSQKKTITQIVKDKKKQTQLTLQWLEE 130
SQKKT + K+KKK++ + ++ L++
Sbjct: 508 S--SQKKTKNKKKKNKKKKSPVPVETLKD 534
>gi|212276096 leucine rich repeat (in FLII) interacting protein 1
isoform 3 [Homo sapiens]
Length = 808
Score = 35.0 bits (79), Expect = 0.32
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 42 EETVYLAAEGQPGGEQGGGEKGEDPELPGAVKSEMHLNNGNFSSEEEDADNHDSKTKAAD 101
E+ + G P G +G ++ P S + N +E D + D + +A D
Sbjct: 511 EKPIKTEVPGSPAGTEGNCQEATGP-------STVDTQNEPLDMKEPDEEKSDQQGEALD 563
Query: 102 QYLSQKKTITQIVKDKKKQTQLTLQWLEE 130
SQKKT + K+KKK++ + ++ L++
Sbjct: 564 S--SQKKTKNKKKKNKKKKSPVPVETLKD 590
>gi|212276070 leucine rich repeat (in FLII) interacting protein 1
isoform 4 [Homo sapiens]
Length = 784
Score = 35.0 bits (79), Expect = 0.32
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 42 EETVYLAAEGQPGGEQGGGEKGEDPELPGAVKSEMHLNNGNFSSEEEDADNHDSKTKAAD 101
E+ + G P G +G ++ P S + N +E D + D + +A D
Sbjct: 487 EKPIKTEVPGSPAGTEGNCQEATGP-------STVDTQNEPLDMKEPDEEKSDQQGEALD 539
Query: 102 QYLSQKKTITQIVKDKKKQTQLTLQWLEE 130
SQKKT + K+KKK++ + ++ L++
Sbjct: 540 S--SQKKTKNKKKKNKKKKSPVPVETLKD 566
>gi|59710093 G-protein coupled receptor 112 [Homo sapiens]
Length = 3080
Score = 34.7 bits (78), Expect = 0.42
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 11/88 (12%)
Query: 616 QFPAGNTDNMPLTGQMELSQIAGHLMTPPISPAMASRGSVINQG-------PMAGRPPSV 668
QFP T N+P + +ME + HL+ P+S AS+ ++++ PM+G P+
Sbjct: 1892 QFPISTTINVPTSNEMETETL--HLVPGPLSTFTASQTGLVSKDVMAMSSIPMSGILPNH 1949
Query: 669 GPVLSAPSHCSTYPEPIYPALPQANHDF 696
G LS ST I L H F
Sbjct: 1950 G--LSENPSLSTSLRAITSTLADVKHTF 1975
>gi|226442893 jumonji domain containing 2C isoform 3 [Homo sapiens]
Length = 813
Score = 33.9 bits (76), Expect = 0.72
Identities = 38/171 (22%), Positives = 69/171 (40%), Gaps = 19/171 (11%)
Query: 557 KNSDASKAAFTASPSSCFLANRNKGSMVSSDAVKNESHVETTYLPLPSSQPGGLGPALHQ 616
+ SD S+ ++ SP SC + G + + ESH +PG + PA+
Sbjct: 498 EKSDPSELSWPKSPESCSSVAESNGVLTEGEESDVESHGN-------GLEPGEI-PAV-- 547
Query: 617 FPAGNTDNMPL----TGQMELSQIAGHLMTPPISPAMASRGSVINQGPMAGRPPSVGPVL 672
P+G ++ + G+ + S+ H ++ P PA + V Q P P V +
Sbjct: 548 -PSGERNSFKVPSIAEGENKTSKSWRHPLSRP--PARSPMTLVKQQAPSDEELPEVLSIE 604
Query: 673 SAPSHCSTYPEPIYPALPQANHDFYSTSSNYQTVFRAQPHST--SGLYPHH 721
++ +P+ + +F + TV R +PH + L P+H
Sbjct: 605 EEVEETESWAKPLIHLWQTKSPNFAAEQEYNATVARMKPHCAICTLLMPYH 655
>gi|21361116 versican isoform 1 [Homo sapiens]
Length = 3396
Score = 33.9 bits (76), Expect = 0.72
Identities = 16/51 (31%), Positives = 28/51 (54%)
Query: 66 PELPGAVKSEMHLNNGNFSSEEEDADNHDSKTKAADQYLSQKKTITQIVKD 116
PE P ++ +++ + N EEE A+ D T + QY++ K +T + KD
Sbjct: 1373 PEFPDIIEIDLYHSEENEEEEEECANATDVTTTPSVQYINGKHLVTTVPKD 1423
>gi|226442897 jumonji domain containing 2C isoform 4 [Homo sapiens]
Length = 835
Score = 33.9 bits (76), Expect = 0.72
Identities = 38/171 (22%), Positives = 69/171 (40%), Gaps = 19/171 (11%)
Query: 557 KNSDASKAAFTASPSSCFLANRNKGSMVSSDAVKNESHVETTYLPLPSSQPGGLGPALHQ 616
+ SD S+ ++ SP SC + G + + ESH +PG + PA+
Sbjct: 520 EKSDPSELSWPKSPESCSSVAESNGVLTEGEESDVESHGN-------GLEPGEI-PAV-- 569
Query: 617 FPAGNTDNMPL----TGQMELSQIAGHLMTPPISPAMASRGSVINQGPMAGRPPSVGPVL 672
P+G ++ + G+ + S+ H ++ P PA + V Q P P V +
Sbjct: 570 -PSGERNSFKVPSIAEGENKTSKSWRHPLSRP--PARSPMTLVKQQAPSDEELPEVLSIE 626
Query: 673 SAPSHCSTYPEPIYPALPQANHDFYSTSSNYQTVFRAQPHST--SGLYPHH 721
++ +P+ + +F + TV R +PH + L P+H
Sbjct: 627 EEVEETESWAKPLIHLWQTKSPNFAAEQEYNATVARMKPHCAICTLLMPYH 677
>gi|226442889 jumonji domain containing 2C isoform 2 [Homo sapiens]
Length = 1047
Score = 33.9 bits (76), Expect = 0.72
Identities = 38/171 (22%), Positives = 69/171 (40%), Gaps = 19/171 (11%)
Query: 557 KNSDASKAAFTASPSSCFLANRNKGSMVSSDAVKNESHVETTYLPLPSSQPGGLGPALHQ 616
+ SD S+ ++ SP SC + G + + ESH +PG + PA+
Sbjct: 498 EKSDPSELSWPKSPESCSSVAESNGVLTEGEESDVESHGN-------GLEPGEI-PAV-- 547
Query: 617 FPAGNTDNMPL----TGQMELSQIAGHLMTPPISPAMASRGSVINQGPMAGRPPSVGPVL 672
P+G ++ + G+ + S+ H ++ P PA + V Q P P V +
Sbjct: 548 -PSGERNSFKVPSIAEGENKTSKSWRHPLSRP--PARSPMTLVKQQAPSDEELPEVLSIE 604
Query: 673 SAPSHCSTYPEPIYPALPQANHDFYSTSSNYQTVFRAQPHST--SGLYPHH 721
++ +P+ + +F + TV R +PH + L P+H
Sbjct: 605 EEVEETESWAKPLIHLWQTKSPNFAAEQEYNATVARMKPHCAICTLLMPYH 655
>gi|109255247 jumonji domain containing 2C isoform 1 [Homo sapiens]
Length = 1056
Score = 33.9 bits (76), Expect = 0.72
Identities = 38/171 (22%), Positives = 69/171 (40%), Gaps = 19/171 (11%)
Query: 557 KNSDASKAAFTASPSSCFLANRNKGSMVSSDAVKNESHVETTYLPLPSSQPGGLGPALHQ 616
+ SD S+ ++ SP SC + G + + ESH +PG + PA+
Sbjct: 498 EKSDPSELSWPKSPESCSSVAESNGVLTEGEESDVESHGN-------GLEPGEI-PAV-- 547
Query: 617 FPAGNTDNMPL----TGQMELSQIAGHLMTPPISPAMASRGSVINQGPMAGRPPSVGPVL 672
P+G ++ + G+ + S+ H ++ P PA + V Q P P V +
Sbjct: 548 -PSGERNSFKVPSIAEGENKTSKSWRHPLSRP--PARSPMTLVKQQAPSDEELPEVLSIE 604
Query: 673 SAPSHCSTYPEPIYPALPQANHDFYSTSSNYQTVFRAQPHST--SGLYPHH 721
++ +P+ + +F + TV R +PH + L P+H
Sbjct: 605 EEVEETESWAKPLIHLWQTKSPNFAAEQEYNATVARMKPHCAICTLLMPYH 655
>gi|4503249 DEK oncogene isoform 1 [Homo sapiens]
Length = 375
Score = 33.9 bits (76), Expect = 0.72
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 16/79 (20%)
Query: 48 AAEGQPGGEQGGGEKGEDPELPGAVKSEMHLNNGNFSSEEEDADNHDSKTKAADQYLSQK 107
AAEG+ Q EK +PE+PG + S EEED D+ + + + +K
Sbjct: 7 AAEGEGTPTQPASEK--EPEMPGPREE---------SEEEEDEDDEEEEEEE-----KEK 50
Query: 108 KTITQIVKDKKKQTQLTLQ 126
I + ++KKK +LT+Q
Sbjct: 51 SLIVEGKREKKKVERLTMQ 69
>gi|28558973 mediator complex subunit 14 [Homo sapiens]
Length = 1454
Score = 33.9 bits (76), Expect = 0.72
Identities = 49/181 (27%), Positives = 69/181 (38%), Gaps = 20/181 (11%)
Query: 742 GSCAGSPYNSRPPSSYGPSLQAQDSHNMQFLNTGSFNFLSNTGAASCQGATLPPNSPNGY 801
G+ P S PP+SY ++ S ++T S N AAS L SP +
Sbjct: 1014 GTSGAYPLTS-PPTSYHSTVNQSPS----MMHTQS---PGNLHAASSPSGALRAPSPASF 1065
Query: 802 YGSNINYPESHRLGSMVNQHVSVISSIRSLPPYSDIHDPLNILDDSGRKQTSSFYTDTSS 861
+ P SH G + S S +L P S P ++ SGR S
Sbjct: 1066 VPTPP--PSSH--GISIGPGASFASPHGTLDPSS----PYTMVSPSGRAGNWPGSPQVSG 1117
Query: 862 PV-ACRTPVLAS---SLQTPIPSSSSQCMYGTSNQYPAQETLDSHGTSSREMVSSLPPIN 917
P A R P ++ SL +P+P +S GTS+Q R +S+P I
Sbjct: 1118 PSPAARMPGMSPANPSLHSPVPDASHSPRAGTSSQTMPTNMPPPRKLPQRSWAASIPTIL 1177
Query: 918 T 918
T
Sbjct: 1178 T 1178
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.131 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,178,610
Number of Sequences: 37866
Number of extensions: 1919765
Number of successful extensions: 6768
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 77
Number of HSP's that attempted gapping in prelim test: 6635
Number of HSP's gapped (non-prelim): 206
length of query: 928
length of database: 18,247,518
effective HSP length: 112
effective length of query: 816
effective length of database: 14,006,526
effective search space: 11429325216
effective search space used: 11429325216
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.