Guide to the Human Genome
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Name: MCAT Sequence: fasta or formatted (180aa) NCBI GI: 27477045
Description:

mitochondrial malonyltransferase isoform b precursor

Referenced in:

Fatty Acid Synthesis
Mitochondria

Other entries for this name:
alt prot [390aa] mitochondrial malonyltransferase isoform a precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            14.4         26           3
 C cysteine            1.7          3           1
 D aspartate           1.7          3           1
 E glutamate           8.3         15           3
 F phenylalanine       4.4          8           1
 G glycine            10.0         18           1
 H histidine           2.2          4           2
 I isoleucine          1.1          2           1
 K lysine              0.6          1           1
 L leucine            10.6         19           2
 M methionine          2.2          4           1
 N asparagine          1.1          2           1
 P proline             6.7         12           3
 Q glutamine           3.9          7           1
 R arginine            7.8         14           2
 S serine              6.7         12           2
 T threonine           2.8          5           1
 V valine             10.6         19           2
 W tryptophan          1.1          2           1
 Y tyrosine            2.2          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mitochondrial malonyltransferase isoform b precursor... 
MCAT                  0.949   mitochondrial malonyltransferase isoform a precursor...
FAM132A               0.015   family with sequence similarity 132, member A [Homo...
CAPN10                0.012   calpain 10 isoform a 
UNCX                  0.012   UNC homeobox 
C6orf174              0.012   hypothetical protein LOC387104 
PAPPA                 0.012   pregnancy-associated plasma protein A preproprotein ...
PCGF6                 0.012   polycomb group ring finger 6 isoform a 
PCGF6                 0.012   polycomb group ring finger 6 isoform b 
RASSF10               0.012   Ras association (RalGDS/AF-6) domain family (N-term...
CAPN10                0.009   calpain 10 isoform c 
ADAMTS13              0.009   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS13              0.009   ADAM metallopeptidase with thrombospondin type 1 mot...
ADAMTS13              0.009   ADAM metallopeptidase with thrombospondin type 1 mot...
FASN                  0.009   fatty acid synthase 
TP53I13               0.006   tumor protein p53 inducible protein 13 
FUT4                  0.006   fucosyltransferase 4 
CHGA                  0.006   chromogranin A precursor 
LOC100293953          0.006   PREDICTED: hypothetical protein 
LOC100290158          0.006   PREDICTED: hypothetical protein XP_002347492 
LOC100288144          0.006   PREDICTED: hypothetical protein XP_002343302 
ATP13A2               0.006   ATPase type 13A2 isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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