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Search of human proteins with 24308279
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|24308279 N-terminal EF-hand calcium binding protein 1 [Homo
sapiens]
(351 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|24308279 N-terminal EF-hand calcium binding protein 1 [Homo s... 701 0.0
gi|149158725 N-terminal EF-hand calcium binding protein 3 isofor... 310 2e-84
gi|149158723 N-terminal EF-hand calcium binding protein 3 isofor... 292 3e-79
gi|32129214 neuronal calcium-binding protein 2 [Homo sapiens] 285 6e-77
gi|51472437 PREDICTED: golgi autoantigen, golgin subfamily a, 6C... 39 0.009
gi|14249340 phospholipase C, delta 4 [Homo sapiens] 38 0.012
gi|38044112 restin isoform b [Homo sapiens] 38 0.012
gi|4506751 restin isoform a [Homo sapiens] 38 0.012
gi|94538359 golgi autoantigen, golgin subfamily a, 6B [Homo sapi... 38 0.016
gi|21735548 centrosomal protein 2 [Homo sapiens] 37 0.020
gi|46592991 GRIP1 associated protein 1 isoform 1 [Homo sapiens] 37 0.027
gi|46488937 interferon alpha/beta receptor 2 isoform a precursor... 37 0.035
gi|46488935 interferon alpha/beta receptor 2 isoform b precursor... 37 0.035
gi|19923129 interferon alpha/beta receptor 2 isoform b precursor... 37 0.035
gi|4502443 dystonin isoform 1e precursor [Homo sapiens] 37 0.035
gi|114155142 nuclear pore complex-associated protein TPR [Homo s... 37 0.035
gi|20149528 proline-serine-threonine phosphatase interacting pro... 37 0.035
gi|239755176 PREDICTED: similar to solute carrier family 25, mem... 36 0.045
gi|239755174 PREDICTED: similar to solute carrier family 25, mem... 36 0.045
gi|56699407 solute carrier family 25, member 25 isoform c [Homo ... 36 0.045
gi|56699401 solute carrier family 25, member 25 isoform a [Homo ... 36 0.045
gi|56699403 solute carrier family 25, member 25 isoform b [Homo ... 36 0.045
gi|90265805 phospholipase C, delta 1 isoform 2 [Homo sapiens] 36 0.059
gi|195972883 phospholipase C, delta 1 isoform 1 [Homo sapiens] 36 0.059
gi|109255234 centrosomal protein 290kDa [Homo sapiens] 35 0.077
gi|19115964 phospholipase C delta 3 [Homo sapiens] 35 0.077
gi|55770888 early endosome antigen 1, 162kD [Homo sapiens] 35 0.077
gi|71061468 centromere protein E [Homo sapiens] 35 0.10
gi|156104908 myosin heavy chain 6 [Homo sapiens] 35 0.10
gi|115496169 myosin, heavy chain 7, cardiac muscle, beta [Homo s... 35 0.13
>gi|24308279 N-terminal EF-hand calcium binding protein 1 [Homo
sapiens]
Length = 351
Score = 701 bits (1810), Expect = 0.0
Identities = 351/351 (100%), Positives = 351/351 (100%)
Query: 1 MEDSQETSPSSNNSSEELSSALHLSKGMSIFLDILRRADKNDDGKLSFEEFKAYFADGVL 60
MEDSQETSPSSNNSSEELSSALHLSKGMSIFLDILRRADKNDDGKLSFEEFKAYFADGVL
Sbjct: 1 MEDSQETSPSSNNSSEELSSALHLSKGMSIFLDILRRADKNDDGKLSFEEFKAYFADGVL 60
Query: 61 SGEELHELFHTIDTHNTNNLDTEELCEYFSQHLGEYENVLAALEDLNLSILKAMGKTKKD 120
SGEELHELFHTIDTHNTNNLDTEELCEYFSQHLGEYENVLAALEDLNLSILKAMGKTKKD
Sbjct: 61 SGEELHELFHTIDTHNTNNLDTEELCEYFSQHLGEYENVLAALEDLNLSILKAMGKTKKD 120
Query: 121 YQEASNLEQFVTRFLLKETLNQLQSLQNSLECAMETTEEQTRQERQGPAKPEVLSIQWPG 180
YQEASNLEQFVTRFLLKETLNQLQSLQNSLECAMETTEEQTRQERQGPAKPEVLSIQWPG
Sbjct: 121 YQEASNLEQFVTRFLLKETLNQLQSLQNSLECAMETTEEQTRQERQGPAKPEVLSIQWPG 180
Query: 181 KRSSRRVQRHNSFSPNSPQFNVSGPGLLEEDNQWMTQINRLQKLIDRLEKKDLKLEPPEE 240
KRSSRRVQRHNSFSPNSPQFNVSGPGLLEEDNQWMTQINRLQKLIDRLEKKDLKLEPPEE
Sbjct: 181 KRSSRRVQRHNSFSPNSPQFNVSGPGLLEEDNQWMTQINRLQKLIDRLEKKDLKLEPPEE 240
Query: 241 EIIEGNTKSHIMLVQRQMSVIEEDLEEFQLALKHYVESASSQSGCLRISIQKLSNESRYM 300
EIIEGNTKSHIMLVQRQMSVIEEDLEEFQLALKHYVESASSQSGCLRISIQKLSNESRYM
Sbjct: 241 EIIEGNTKSHIMLVQRQMSVIEEDLEEFQLALKHYVESASSQSGCLRISIQKLSNESRYM 300
Query: 301 IYEFWENSSVWNSHLQTNYSKTFQRSNVDFLETPELTSTMLVPASWWILNN 351
IYEFWENSSVWNSHLQTNYSKTFQRSNVDFLETPELTSTMLVPASWWILNN
Sbjct: 301 IYEFWENSSVWNSHLQTNYSKTFQRSNVDFLETPELTSTMLVPASWWILNN 351
>gi|149158725 N-terminal EF-hand calcium binding protein 3 isoform 1
[Homo sapiens]
Length = 362
Score = 310 bits (793), Expect = 2e-84
Identities = 162/329 (49%), Positives = 220/329 (66%), Gaps = 8/329 (2%)
Query: 27 GMSIFLDILRRADKNDDGKLSFEEFKAYFADGVLSGEELHELFHTIDTHNTNNLDTEELC 86
G ++F D+ RRADKNDDGKLSFEEF+ YFADGVLS EL ELF ID H T+NL+TE+LC
Sbjct: 37 GHTLFQDVFRRADKNDDGKLSFEEFQNYFADGVLSLGELQELFSGIDGHLTDNLETEKLC 96
Query: 87 EYFSQHLGEYENVLAALEDLNLSILKAMGKTKKDYQEASNLEQFVTRFLLKETLNQLQSL 146
+YFS+HLG Y VLAALE LN ++L AM TK +Y+ AS ++QFVTRFLL+ET++QLQ+L
Sbjct: 97 DYFSEHLGVYRPVLAALESLNRAVLAAMDATKLEYERASKVDQFVTRFLLRETVSQLQAL 156
Query: 147 QNSLECAMETTEEQTRQERQG----PAKPEVLSIQWPGKRSSRRVQRHNSFSPNSPQFNV 202
Q+SLE A +T E Q R A+ + + G+R+ R V R +++SP S
Sbjct: 157 QSSLEGASDTLEAQAHGWRSDAESVEAQSRLCGSRRAGRRALRSVSRSSTWSPGSSDTGR 216
Query: 203 SGPGLLEEDNQWMTQINRLQKLIDRLEKKDLKLEPPEEEIIEGNTKSHIMLVQRQMSVIE 262
S E + QW Q+NRLQ+LID+LE K +LEP EE + HI++ QRQ+ V E
Sbjct: 217 SS----EAEMQWRLQVNRLQELIDQLECKAPRLEPLREEDLAKGPDLHILMAQRQVQVAE 272
Query: 263 EDLEEFQLALKHYVESASSQSGCLRISIQKLSNESRYMIYEFWENSSVWNSHLQTNYSKT 322
E L++F AL+ YV+ +QS CL +S QK+ + + + +YEFW++ + W H Q+ SK
Sbjct: 273 EGLQDFHRALRCYVDFTGAQSHCLHVSAQKMLDGASFTLYEFWQDEASWRRHQQSPGSKA 332
Query: 323 FQRSNVDFLETPELTSTMLVPASWWILNN 351
FQR +D L P+ +T+ PASWWI+NN
Sbjct: 333 FQRILIDHLRAPDTLTTVFFPASWWIMNN 361
>gi|149158723 N-terminal EF-hand calcium binding protein 3 isoform 2
[Homo sapiens]
Length = 396
Score = 292 bits (748), Expect = 3e-79
Identities = 162/363 (44%), Positives = 220/363 (60%), Gaps = 42/363 (11%)
Query: 27 GMSIFLDILRRADKNDDGKLSFEEFKAYFADGVLSGEELHELFHTIDTHNTNNLDTEELC 86
G ++F D+ RRADKNDDGKLSFEEF+ YFADGVLS EL ELF ID H T+NL+TE+LC
Sbjct: 37 GHTLFQDVFRRADKNDDGKLSFEEFQNYFADGVLSLGELQELFSGIDGHLTDNLETEKLC 96
Query: 87 EYFSQHLGEYENVLAALEDLNLSILKAMGKTKKDYQEASNLEQFVTRFLLKETLNQLQSL 146
+YFS+HLG Y VLAALE LN ++L AM TK +Y+ AS ++QFVTRFLL+ET++QLQ+L
Sbjct: 97 DYFSEHLGVYRPVLAALESLNRAVLAAMDATKLEYERASKVDQFVTRFLLRETVSQLQAL 156
Query: 147 QNSLECAMETTEEQTRQERQG----PAKPEVLSIQWPGKRSSRRVQRHNSFSPNSPQFNV 202
Q+SLE A +T E Q R A+ + + G+R+ R V R +++SP S
Sbjct: 157 QSSLEGASDTLEAQAHGWRSDAESVEAQSRLCGSRRAGRRALRSVSRSSTWSPGSSDTGR 216
Query: 203 SGPGLLEEDNQWMTQINRLQKLIDRLEKK------------------------------- 231
S E + QW Q+NRLQ+LID+LE K
Sbjct: 217 SS----EAEMQWRLQVNRLQELIDQLECKVRAVGPGPHKGGPSWYPPEPGPCWRPGPHSV 272
Query: 232 ---DLKLEPPEEEIIEGNTKSHIMLVQRQMSVIEEDLEEFQLALKHYVESASSQSGCLRI 288
+LEP EE + HI++ QRQ+ V EE L++F AL+ YV+ +QS CL +
Sbjct: 273 PSQAPRLEPLREEDLAKGPDLHILMAQRQVQVAEEGLQDFHRALRCYVDFTGAQSHCLHV 332
Query: 289 SIQKLSNESRYMIYEFWENSSVWNSHLQTNYSKTFQRSNVDFLETPELTSTMLVPASWWI 348
S QK+ + + + +YEFW++ + W H Q+ SK FQR +D L P+ +T+ PASWWI
Sbjct: 333 SAQKMLDGASFTLYEFWQDEASWRRHQQSPGSKAFQRILIDHLRAPDTLTTVFFPASWWI 392
Query: 349 LNN 351
+NN
Sbjct: 393 MNN 395
>gi|32129214 neuronal calcium-binding protein 2 [Homo sapiens]
Length = 386
Score = 285 bits (728), Expect = 6e-77
Identities = 152/321 (47%), Positives = 204/321 (63%), Gaps = 2/321 (0%)
Query: 27 GMSIFLDILRRADKNDDGKLSFEEFKAYFADGVLSGEELHELFHTIDTHNTNNLDTEELC 86
G ++ LDI RRADKNDDGKLS EEF+ +FADGVL+ +EL +LFHTID+ NTN++DT+ELC
Sbjct: 61 GTAVILDIFRRADKNDDGKLSLEEFQLFFADGVLNEKELEDLFHTIDSDNTNHVDTKELC 120
Query: 87 EYFSQHLGEYENVLAALEDLNLSILKAMGKTKKDYQEASNLEQFVTRFLLKETLNQLQSL 146
+YF H+G+YE+VLA+LE LN S+LKAMG TKK Y+ SN++QFVTRFLLKET NQ+QSL
Sbjct: 121 DYFVDHMGDYEDVLASLETLNHSVLKAMGYTKKVYEGGSNVDQFVTRFLLKETANQIQSL 180
Query: 147 QNSLECAMETTEEQTRQERQGPAKPEVLSIQ-WPGKRSSRRVQRHNSFSPNSPQFNVSGP 205
+S+E A+E EEQT Q RQ KP + Q W G + H + + S
Sbjct: 181 LSSVESAVEAIEEQTSQLRQNHIKPSHSAAQTWCGSPTPASAPNHKLMAMEQGKTLPSAT 240
Query: 206 GLLEEDNQWMTQINRLQKLIDRLEKKDLKLEPPEEEIIEGNTKSHIMLVQRQMSVIEEDL 265
+E+ QI+RL +LI RLE K L + + E T H+ LV+++M+V E L
Sbjct: 241 EDAKEEG-LEAQISRLAELIGRLESKALWFDLQQRLSDEDGTNMHLQLVRQEMAVCPEQL 299
Query: 266 EEFQLALKHYVESASSQSGCLRISIQKLSNESRYMIYEFWENSSVWNSHLQTNYSKTFQR 325
EF +L+ Y+ + C I+ +LS+ ++IYEFWE W HLQ+ K F+
Sbjct: 300 SEFLDSLRQYLRGTTGVRNCFHITAVRLSDGFTFVIYEFWETEEAWKRHLQSPLCKAFRH 359
Query: 326 SNVDFLETPELTSTMLVPASW 346
VD L PE S +LVPA+W
Sbjct: 360 VKVDTLSQPEALSRILVPAAW 380
>gi|51472437 PREDICTED: golgi autoantigen, golgin subfamily a, 6C
isoform 1 [Homo sapiens]
Length = 693
Score = 38.5 bits (88), Expect = 0.009
Identities = 36/162 (22%), Positives = 74/162 (45%), Gaps = 24/162 (14%)
Query: 159 EQTRQERQGPAKPEVLSIQW---PGKRSSRRVQRHNSFSPNSPQFNVSGPGLLEEDNQWM 215
E++RQ + AK ++ Q PG + + ++ + S SP+ SG G D+Q+
Sbjct: 15 EESRQNKLAAAKKKLKEYQQRKSPGIPAGAKTKKKKTDS--SPETTTSGGGHSPGDSQYQ 72
Query: 216 ----------TQINRLQKLIDRLEKKDLKLEPPEEEIIEGNTKSH---------IMLVQR 256
IN+L + I+ L+++ ++E EE + N + H I ++
Sbjct: 73 ELAVALESSSVTINQLNENIESLKQQKKQVEHQLEEAKKTNNEIHKAQMEQLETINILTL 132
Query: 257 QMSVIEEDLEEFQLALKHYVESASSQSGCLRISIQKLSNESR 298
+ + ++ L + A +H+ E + +G L+ S+Q++ R
Sbjct: 133 EKADLKTTLYHTKRAARHFEEESKDLAGRLQYSLQRIQELER 174
Score = 28.9 bits (63), Expect = 7.2
Identities = 38/165 (23%), Positives = 71/165 (43%), Gaps = 26/165 (15%)
Query: 135 LLKETLNQLQSLQNSL--ECAMETTEEQTRQERQGPAKPEVLSIQWPGKRSSRRVQRHNS 192
L KE +LQ + L + A E++ E+ + + ++Q G+R ++ QR
Sbjct: 331 LSKEQKQRLQEQEEMLREQEAQRVREQERLCEQNERLREQQKTLQEQGERLRKQEQRLRK 390
Query: 193 FSPNSPQFNVSGPGLLEEDNQWMTQINRLQKLIDRLEKKDLKLEPPEEEI-IEGNTKSHI 251
L +E+ + Q RL +RL KK+ +L+ EE + + N K
Sbjct: 391 QEER----------LRKEEERLQKQEKRLWDQEERLWKKEERLQKQEERLALSQNHKLDK 440
Query: 252 MLVQRQMSV------------IEEDLEEFQLAL-KHYVESASSQS 283
L + Q S +E+ ++E Q L + ++E+AS ++
Sbjct: 441 QLAEPQCSFEDLNNEKKSALQLEQQVKELQEKLDEEHLEAASQRN 485
>gi|14249340 phospholipase C, delta 4 [Homo sapiens]
Length = 762
Score = 38.1 bits (87), Expect = 0.012
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 33 DILRRADKNDDGKLSFEEFK--AYFADGVLSGEELHELFHTIDTHNTNNLDTEELCEYF 89
D +R DKN DGK+SF+E + + + + E LF DT + L+ EE +++
Sbjct: 141 DWFQRGDKNQDGKMSFQEVQRLLHLMNVEMDQEYAFSLFQAADTSQSGTLEGEEFVQFY 199
>gi|38044112 restin isoform b [Homo sapiens]
Length = 1392
Score = 38.1 bits (87), Expect = 0.012
Identities = 37/148 (25%), Positives = 71/148 (47%), Gaps = 12/148 (8%)
Query: 136 LKETLNQLQSLQNSLECAMETTEEQTRQERQGPAKPEVLSIQWPGKRSSRRV-QRHNSFS 194
L+E L+++ ++ +LE E Q +E+ A E +S+Q + + ++ Q+ F+
Sbjct: 789 LQENLSEVSQVKETLE-----KELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFN 843
Query: 195 PNSPQFNVSGPGLLEEDNQWMTQINRLQKLIDRLEKKDLKLEPPEEEIIE--GNTKSHIM 252
S L + + ++ + R ++LI EK LE EI++ G+ S +
Sbjct: 844 MLSSDLEKLRENLADMEAKFREKDEREEQLIKAKEK----LENDIAEIMKMSGDNSSQLT 899
Query: 253 LVQRQMSVIEEDLEEFQLALKHYVESAS 280
+ ++ + E D+EE QL L E+AS
Sbjct: 900 KMNDELRLKERDVEELQLKLTKANENAS 927
>gi|4506751 restin isoform a [Homo sapiens]
Length = 1427
Score = 38.1 bits (87), Expect = 0.012
Identities = 37/148 (25%), Positives = 71/148 (47%), Gaps = 12/148 (8%)
Query: 136 LKETLNQLQSLQNSLECAMETTEEQTRQERQGPAKPEVLSIQWPGKRSSRRV-QRHNSFS 194
L+E L+++ ++ +LE E Q +E+ A E +S+Q + + ++ Q+ F+
Sbjct: 824 LQENLSEVSQVKETLE-----KELQILKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFN 878
Query: 195 PNSPQFNVSGPGLLEEDNQWMTQINRLQKLIDRLEKKDLKLEPPEEEIIE--GNTKSHIM 252
S L + + ++ + R ++LI EK LE EI++ G+ S +
Sbjct: 879 MLSSDLEKLRENLADMEAKFREKDEREEQLIKAKEK----LENDIAEIMKMSGDNSSQLT 934
Query: 253 LVQRQMSVIEEDLEEFQLALKHYVESAS 280
+ ++ + E D+EE QL L E+AS
Sbjct: 935 KMNDELRLKERDVEELQLKLTKANENAS 962
>gi|94538359 golgi autoantigen, golgin subfamily a, 6B [Homo
sapiens]
Length = 693
Score = 37.7 bits (86), Expect = 0.016
Identities = 37/162 (22%), Positives = 74/162 (45%), Gaps = 24/162 (14%)
Query: 159 EQTRQERQGPAKPEVLSIQW---PGKRSSRRVQRHNSFSPNSPQFNVSGPGLLEEDNQWM 215
E++RQ + AK ++ Q PG + + ++ + S SP+ SG G D+Q+
Sbjct: 15 EESRQNKLAAAKKKLKEYQQRKSPGIPAGAKTKKKKTDS--SPETTTSGGGHSPGDSQYQ 72
Query: 216 ----------TQINRLQKLIDRLEKKDLKLEPPEEEIIEGNTKSHIMLVQRQMSVIEEDL 265
I++L + I+ L+++ ++E EE + N + H ++R ++ L
Sbjct: 73 ELAVALESSSVTISQLNENIESLKQQKKQVEHQLEEAKKTNNEIHKAQMERLETINILTL 132
Query: 266 EEFQL---------ALKHYVESASSQSGCLRISIQKLSNESR 298
E+ L A +H+ E + +G L+ S+Q++ R
Sbjct: 133 EKADLKTTLYHTKRAARHFEEESKDLAGRLQYSLQRIQELER 174
Score = 30.4 bits (67), Expect = 2.5
Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 26/165 (15%)
Query: 135 LLKETLNQLQSLQNSL-ECAMETTEEQTRQ-ERQGPAKPEVLSIQWPGKRSSRRVQRHNS 192
L KE +LQ + L E ++ EQ R E+ + + ++Q G+R ++ QR
Sbjct: 331 LSKEQKQRLQEQEEMLREQEVQRVREQERLCEQNERLREQQKTLQEQGERLRKQEQRLRK 390
Query: 193 FSPNSPQFNVSGPGLLEEDNQWMTQINRLQKLIDRLEKKDLKLEPPEEEI-IEGNTKSHI 251
L +E+ + Q RL +RL KK+ +L+ EE + + N K
Sbjct: 391 QEER----------LRKEEERLQKQEKRLWDQEERLWKKEERLQKQEERLALSQNHKLDK 440
Query: 252 MLVQRQMSV------------IEEDLEEFQLAL-KHYVESASSQS 283
L + Q S +E+ ++E Q L + ++E+AS Q+
Sbjct: 441 QLAEPQCSFEDLNNEKKSALQLEQQVKELQEKLDEEHLEAASQQN 485
>gi|21735548 centrosomal protein 2 [Homo sapiens]
Length = 2442
Score = 37.4 bits (85), Expect = 0.020
Identities = 44/190 (23%), Positives = 85/190 (44%), Gaps = 28/190 (14%)
Query: 116 KTKKDYQEASNLEQFVTRFLLKETLNQLQSLQN---SLEC-AMETTEEQTRQERQGPAKP 171
+T+++ E LE +++ Q+Q L+ +LEC A+E E + E Q
Sbjct: 1518 ETQRNVLEHQLLELEKKDQMIESQRGQVQDLKKQLVTLECLALELEENHHKMECQ----- 1572
Query: 172 EVLSIQWPGKRSSRRV----------QRHNSFSPNSPQFN-------VSGPGLLEEDNQW 214
+ L + G+R ++RV +R S Q + V L E D +
Sbjct: 1573 QKLIKELEGQRETQRVALTHLTLDLEERSQELQAQSSQIHDLESHSTVLARELQERDQEV 1632
Query: 215 MTQINRLQKLIDRLEKKDLKLEPPEEEIIEGNTKSHIMLVQR--QMSVIEEDLEEFQLAL 272
+Q ++++L + E LE ++E++ + ++ QR Q ++EEDLE+ +L+L
Sbjct: 1633 KSQREQIEELQRQKEHLTQDLERRDQELMLQKERIQVLEDQRTRQTKILEEDLEQIKLSL 1692
Query: 273 KHYVESASSQ 282
+ ++Q
Sbjct: 1693 RERGRELTTQ 1702
>gi|46592991 GRIP1 associated protein 1 isoform 1 [Homo sapiens]
Length = 841
Score = 37.0 bits (84), Expect = 0.027
Identities = 52/253 (20%), Positives = 102/253 (40%), Gaps = 29/253 (11%)
Query: 67 ELFHTIDTHNTNNL--DTEELCEYFSQHLGEYENVLAALEDLNLSI---LKAMGKTKKDY 121
E T T N L T L Q EYE+++ +DLN + L+A + +
Sbjct: 346 EQIQTAKTQELNMLREQTTGLAAELQQQQAEYEDLMGQKDDLNSQLQESLRANSRLLEQL 405
Query: 122 QEASNLEQFVTRFLLKETLNQLQSLQNSLECAMETTEEQTRQERQGPA-----KPEVLSI 176
QE ++ +T+ L + + + E AMET +E+++ + + A + EVL +
Sbjct: 406 QEIGQEKEQLTQELQEARKSAEKRKAMLDELAMETLQEKSQHKEELGAVRLRHEKEVLGV 465
Query: 177 QWPGKRSSRRVQRHNSFSPNSPQFNVSGPGLLEEDNQWMTQINRLQKLIDRLEKK----- 231
+ +R R + + G + E+ ++ LQ+ ++ L+ +
Sbjct: 466 RARYERELRELHEDKKRQEEELR------GQIREEKARTRELETLQQTVEELQAQVHSMD 519
Query: 232 ------DLKLEPPEEEIIEGNTKSHIMLVQ-RQMSVIEEDLEEFQLA-LKHYVESASSQS 283
+ +L+ EE + + + L Q R+ E +E +L ++ +E A +
Sbjct: 520 GAKGWFERRLKEAEESLQQQQQEQEEALKQCREQHAAELKGKEEELQDVRDQLEQAQEER 579
Query: 284 GCLRISIQKLSNE 296
C +I L E
Sbjct: 580 DCHLKTISSLKQE 592
>gi|46488937 interferon alpha/beta receptor 2 isoform a precursor
[Homo sapiens]
Length = 515
Score = 36.6 bits (83), Expect = 0.035
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 14/88 (15%)
Query: 232 DLKLEPPEEEIIEGNTKSHIMLVQRQMSVIEEDLEEFQLAL-----------KHYVESAS 280
D+ EPPE EI+ +HI ++ + S++EE+L +F L+L KH E
Sbjct: 131 DMSFEPPEFEIV--GFTNHINVMVKFPSIVEEEL-QFDLSLVIEEQSEGIVKKHKPEIKG 187
Query: 281 SQSGCLRISIQKLSNESRYMIYEFWENS 308
+ SG I KL + Y + + E+S
Sbjct: 188 NMSGNFTYIIDKLIPNTNYCVSVYLEHS 215
>gi|46488935 interferon alpha/beta receptor 2 isoform b precursor
[Homo sapiens]
Length = 331
Score = 36.6 bits (83), Expect = 0.035
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 14/88 (15%)
Query: 232 DLKLEPPEEEIIEGNTKSHIMLVQRQMSVIEEDLEEFQLAL-----------KHYVESAS 280
D+ EPPE EI+ +HI ++ + S++EE+L +F L+L KH E
Sbjct: 131 DMSFEPPEFEIV--GFTNHINVMVKFPSIVEEEL-QFDLSLVIEEQSEGIVKKHKPEIKG 187
Query: 281 SQSGCLRISIQKLSNESRYMIYEFWENS 308
+ SG I KL + Y + + E+S
Sbjct: 188 NMSGNFTYIIDKLIPNTNYCVSVYLEHS 215
>gi|19923129 interferon alpha/beta receptor 2 isoform b precursor
[Homo sapiens]
Length = 331
Score = 36.6 bits (83), Expect = 0.035
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 14/88 (15%)
Query: 232 DLKLEPPEEEIIEGNTKSHIMLVQRQMSVIEEDLEEFQLAL-----------KHYVESAS 280
D+ EPPE EI+ +HI ++ + S++EE+L +F L+L KH E
Sbjct: 131 DMSFEPPEFEIV--GFTNHINVMVKFPSIVEEEL-QFDLSLVIEEQSEGIVKKHKPEIKG 187
Query: 281 SQSGCLRISIQKLSNESRYMIYEFWENS 308
+ SG I KL + Y + + E+S
Sbjct: 188 NMSGNFTYIIDKLIPNTNYCVSVYLEHS 215
>gi|4502443 dystonin isoform 1e precursor [Homo sapiens]
Length = 2649
Score = 36.6 bits (83), Expect = 0.035
Identities = 59/288 (20%), Positives = 106/288 (36%), Gaps = 48/288 (16%)
Query: 63 EELHELFHTIDTHNTNNLDTEELCEYFSQHLGEYENVLAALE------------------ 104
+++ EL + ++ +EE L E N L L+
Sbjct: 1380 QDMRELTYELNALQLEKTSSEEKARLLKDKLDETNNTLRCLKLELERKDQAEKGYSQQLR 1439
Query: 105 DLNLSILKAMGKTKKDYQEASNLEQFVTRFLLKETLNQLQSLQNSLECAMETTEEQTRQE 164
+L + + GK ++ QEAS+L++ + L +L+SL + + TR
Sbjct: 1440 ELGRQLNQTTGKAEEAMQEASDLKKIKRNYQL-----ELESLNHEKGKLQREVDRITRAH 1494
Query: 165 RQGPAKPEVLSIQWPGKRSSRRVQRHNSFSPNS----PQFNVSGPGLLEEDNQWMTQINR 220
+ L+ Q R + ++R S QF S LL+ ++
Sbjct: 1495 AVAEKNIQHLNSQIHSFRDEKELERLQICQRKSDHLKEQFEKSHEQLLQNIKAEKENNDK 1554
Query: 221 LQKLIDRLEKKD---LKLEPPEEEIIEGNTKSHIMLVQRQMSVIEEDLEEFQLALKHYVE 277
+Q+L + LEK + L+ EE+ N ++ +M M I+ + E L E
Sbjct: 1555 IQRLNEELEKSNECAEMLKQKVEELTRQNNETKLM-----MQRIQAESENIVL------E 1603
Query: 278 SASSQSGCLRISIQKLSNESRYMIYEFWENSSVWNSHLQTNYSKTFQR 325
+ Q C + IQ + + S+ + H QT + FQR
Sbjct: 1604 KQTIQQRCEALKIQADGFKDQL-------RSTNEHLHKQTKTEQDFQR 1644
>gi|114155142 nuclear pore complex-associated protein TPR [Homo
sapiens]
Length = 2363
Score = 36.6 bits (83), Expect = 0.035
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 3/97 (3%)
Query: 70 HTIDTHNTNNLDTEELCEYFSQHLGEYENV--LAALEDLNLSILKAMGKTK-KDYQEASN 126
H I ++ D E SQHL Y N+ L L L+ +G+T+ ++ QE ++
Sbjct: 514 HVIRDEEVSSADISSSSEVISQHLVSYRNIEELQQQNQRLLVALRELGETREREEQETTS 573
Query: 127 LEQFVTRFLLKETLNQLQSLQNSLECAMETTEEQTRQ 163
+ + L+ L +L+ L+ S + M+ + RQ
Sbjct: 574 SKITELQLKLESALTELEQLRKSRQHQMQLVDSIVRQ 610
>gi|20149528 proline-serine-threonine phosphatase interacting
protein 1 [Homo sapiens]
Length = 416
Score = 36.6 bits (83), Expect = 0.035
Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 4/100 (4%)
Query: 83 EELCEYFSQHLGEYENVLAALEDLNLSILKAMGKTKKDYQE----ASNLEQFVTRFLLKE 138
EE E + +YE V+ ++ LS+ K ++KK Y++ A + EQ R
Sbjct: 106 EEFRERQKEQRKKYEAVMDRVQKSKLSLYKKAMESKKTYEQKCRDADDAEQAFERISANG 165
Query: 139 TLNQLQSLQNSLECAMETTEEQTRQERQGPAKPEVLSIQW 178
Q++ QN ++ E R RQ A+ E + +W
Sbjct: 166 HQKQVEKSQNKARQCKDSATEAERVYRQSIAQLEKVRAEW 205
>gi|239755176 PREDICTED: similar to solute carrier family 25, member
25 isoform 2 [Homo sapiens]
Length = 469
Score = 36.2 bits (82), Expect = 0.045
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 34 ILRRADKNDDGKLSFEEFKAYFADGVLSGEELHELFHTIDTHNTNNLDTEELCE 87
I++ DK+ DG+L FEEF Y D ++L +F ++D N +D +E+ +
Sbjct: 55 IVQAGDKDLDGQLDFEEFVHYLQD---HEKKLRLVFKSLDKKNDGRIDAQEIMQ 105
>gi|239755174 PREDICTED: similar to solute carrier family 25, member
25 isoform 1 [Homo sapiens]
Length = 503
Score = 36.2 bits (82), Expect = 0.045
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 34 ILRRADKNDDGKLSFEEFKAYFADGVLSGEELHELFHTIDTHNTNNLDTEELCE 87
I++ DK+ DG+L FEEF Y D ++L +F ++D N +D +E+ +
Sbjct: 89 IVQAGDKDLDGQLDFEEFVHYLQD---HEKKLRLVFKSLDKKNDGRIDAQEIMQ 139
>gi|56699407 solute carrier family 25, member 25 isoform c [Homo
sapiens]
Length = 489
Score = 36.2 bits (82), Expect = 0.045
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 34 ILRRADKNDDGKLSFEEFKAYFADGVLSGEELHELFHTIDTHNTNNLDTEELCE 87
I++ DK+ DG+L FEEF Y D ++L +F ++D N +D +E+ +
Sbjct: 75 IVQAGDKDLDGQLDFEEFVHYLQD---HEKKLRLVFKSLDKKNDGRIDAQEIMQ 125
>gi|56699401 solute carrier family 25, member 25 isoform a [Homo
sapiens]
Length = 469
Score = 36.2 bits (82), Expect = 0.045
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 34 ILRRADKNDDGKLSFEEFKAYFADGVLSGEELHELFHTIDTHNTNNLDTEELCE 87
I++ DK+ DG+L FEEF Y D ++L +F ++D N +D +E+ +
Sbjct: 55 IVQAGDKDLDGQLDFEEFVHYLQD---HEKKLRLVFKSLDKKNDGRIDAQEIMQ 105
>gi|56699403 solute carrier family 25, member 25 isoform b [Homo
sapiens]
Length = 503
Score = 36.2 bits (82), Expect = 0.045
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 34 ILRRADKNDDGKLSFEEFKAYFADGVLSGEELHELFHTIDTHNTNNLDTEELCE 87
I++ DK+ DG+L FEEF Y D ++L +F ++D N +D +E+ +
Sbjct: 89 IVQAGDKDLDGQLDFEEFVHYLQD---HEKKLRLVFKSLDKKNDGRIDAQEIMQ 139
>gi|90265805 phospholipase C, delta 1 isoform 2 [Homo sapiens]
Length = 756
Score = 35.8 bits (81), Expect = 0.059
Identities = 17/57 (29%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 35 LRRADKNDDGKLSFEEFKAYFADGVLSGEELH--ELFHTIDTHNTNNLDTEELCEYF 89
LR+ADKN D K+SF+E + + + + ++ + ++F D T++L+ EE+ ++
Sbjct: 149 LRKADKNKDNKMSFKELQNFLKELNIQVDDSYARKIFRECDHSQTDSLEDEEIEAFY 205
>gi|195972883 phospholipase C, delta 1 isoform 1 [Homo sapiens]
Length = 777
Score = 35.8 bits (81), Expect = 0.059
Identities = 17/57 (29%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 35 LRRADKNDDGKLSFEEFKAYFADGVLSGEELH--ELFHTIDTHNTNNLDTEELCEYF 89
LR+ADKN D K+SF+E + + + + ++ + ++F D T++L+ EE+ ++
Sbjct: 170 LRKADKNKDNKMSFKELQNFLKELNIQVDDSYARKIFRECDHSQTDSLEDEEIEAFY 226
>gi|109255234 centrosomal protein 290kDa [Homo sapiens]
Length = 2479
Score = 35.4 bits (80), Expect = 0.077
Identities = 50/219 (22%), Positives = 91/219 (41%), Gaps = 31/219 (14%)
Query: 93 LGEYENVLAALEDLNLSILKAMGKTKKDYQEASNLEQFVTRFLLKETLNQLQSLQNSLEC 152
L E E +A +D S+L + K +D + ++ +T +KE N LQ
Sbjct: 1623 LAEMEQTVAEQDDSLSSLLVKLKKVSQDLER----QREITELKVKEFENIKLQLQ----- 1673
Query: 153 AMETTEEQTRQERQGPAKPEVLSIQWPGKRSSRRVQRHNSFSPNSPQFNVSGP-----GL 207
E E++ ++ K EV +++ +S + Q S + N P L
Sbjct: 1674 --ENHEDEVKK-----VKAEVEDLKYLLDQSQKESQCLKSELQAQKEANSRAPTTTMRNL 1726
Query: 208 LEEDNQWMTQINRLQKLIDR--LEKKDLKLEPPEEEIIEGNTK--SHIMLVQ------RQ 257
+E + + QK + R LE + EE II ++ +H+ + Q R+
Sbjct: 1727 VERLKSQLALKEKQQKALSRALLELRAEMTAAAEERIISATSQKEAHLNVQQIVDRHTRE 1786
Query: 258 MSVIEEDLEEFQLALKHYVESASSQSGCLRISIQKLSNE 296
+ EDL E L LK ++++ ++ L ++ L+NE
Sbjct: 1787 LKTQVEDLNENLLKLKEALKTSKNRENSLTDNLNDLNNE 1825
>gi|19115964 phospholipase C delta 3 [Homo sapiens]
Length = 789
Score = 35.4 bits (80), Expect = 0.077
Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 21/123 (17%)
Query: 35 LRRADKNDDGKLSFEEFKAYFADGVLSGEELHE--LFHTIDTHNTNNLDTEELCEY---- 88
L RAD N D K+SF+E K+ + +++ LF D N + L+ E+ E+
Sbjct: 191 LHRADSNQDSKMSFKEIKSLLRMVNVDMNDMYAYLLFKECDHSNNDRLEGAEIEEFLRRL 250
Query: 89 ---------FSQHLGEYENVLAALEDLNLSILKAMGKTKKDYQEASNLEQFVTRFLLKET 139
F Q+ GE + VL+A E +L+ + ++ + +Q + + L ET
Sbjct: 251 LKRPELEEIFHQYSGE-DRVLSAPE-----LLEFLEDQGEEGATLARAQQLIQTYELNET 304
Query: 140 LNQ 142
Q
Sbjct: 305 AKQ 307
>gi|55770888 early endosome antigen 1, 162kD [Homo sapiens]
Length = 1411
Score = 35.4 bits (80), Expect = 0.077
Identities = 52/281 (18%), Positives = 115/281 (40%), Gaps = 22/281 (7%)
Query: 63 EELHELFHTIDTHNTNNLDTEELCEYFSQHLGEYENVLAALEDLNLSILKAMGKTKKDYQ 122
+EL+++ +D D +E C HL EY+ +LE + G+ KK
Sbjct: 681 QELNKITTQLDQVTAKLQDKQEHCSQLESHLKEYKEKYLSLEQKTEEL---EGQIKK--L 735
Query: 123 EASNLEQFVTRFLLKETLNQLQSLQNSLECAMETTEEQTRQERQGPAKPEVLSIQWPGKR 182
EA +LE ++ + L Q + L LE +Q E++ + L +Q K+
Sbjct: 736 EADSLEVKASKEQALQDLQQQRQLNTDLELRATELSKQLEMEKEIVSSTR-LDLQ---KK 791
Query: 183 SSRRVQRHNSFSPNSPQFNVSGPGLLEEDNQWMTQINRLQ--KLIDRLEKKDLKLEPPEE 240
S + + + L++D + ++Q ++Q +L +R++ +L+ +
Sbjct: 792 SEALESIKQKLTKQEEEKQI-----LKQDFETLSQETKIQHEELNNRIQTTVTELQKVKM 846
Query: 241 EIIEGNTKSHIMLVQRQMSVIEEDLEEFQLALKHYVESASSQSGCLRISIQKLSNESRYM 300
E + + + V+ ++S + + L+ K E + + + ++K E ++
Sbjct: 847 E--KEALMTELSTVKDKLSKVSDSLKN----SKSEFEKENQKGKAAILDLEKTCKELKHQ 900
Query: 301 IYEFWENSSVWNSHLQTNYSKTFQRSNVDFLETPELTSTML 341
+ EN+ L+ + K + S+ LE + ++
Sbjct: 901 LQVQMENTLKEQKELKKSLEKEKEASHQLKLELNSMQEQLI 941
>gi|71061468 centromere protein E [Homo sapiens]
Length = 2701
Score = 35.0 bits (79), Expect = 0.10
Identities = 56/268 (20%), Positives = 106/268 (39%), Gaps = 66/268 (24%)
Query: 73 DTHNT--NNLDTEELCEYFSQHLGEYENVLAALEDL-------NLSILKAMGKTKKDYQ- 122
D H+T N+DT+E + L +++ + L+ NL + + G+TK ++Q
Sbjct: 951 DIHDTVNMNIDTQEQLRNALESLKQHQETINTLKSKISEEVSRNLHMEENTGETKDEFQQ 1010
Query: 123 -----------EASN-------------LEQFVTRFLLKETLNQLQS------------- 145
EA N +EQ F L + N+LQ
Sbjct: 1011 KMVGIDKKQDLEAKNTQTLTADVKDNEIIEQQRKIFSLIQEKNELQQMLESVIAEKEQLK 1070
Query: 146 --LQNSLECAMETTEE------QTRQERQGPAKPEVLSIQWPGKRS---SRRVQRHNSFS 194
L+ ++E +E EE + +++++ A+ + +I+ G+ S R +
Sbjct: 1071 TDLKENIEMTIENQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRTCDRLAEVEEKLK 1130
Query: 195 PNSPQFNVSGPGLL---EEDNQWMTQINRLQKLIDRLEKKDLKLEPPEEEIIE-----GN 246
S Q LL EE ++ +IN ++ L + L+ K+L LE E E +E
Sbjct: 1131 EKSQQLQEKQQQLLNVQEEMSEMQKKINEIENLKNELKNKELTLEHMETERLELAQKLNE 1190
Query: 247 TKSHIMLVQRQMSVIEEDLEEFQLALKH 274
+ + ++ V++E + F+ H
Sbjct: 1191 NYEEVKSITKERKVLKELQKSFETERDH 1218
>gi|156104908 myosin heavy chain 6 [Homo sapiens]
Length = 1939
Score = 35.0 bits (79), Expect = 0.10
Identities = 66/332 (19%), Positives = 133/332 (40%), Gaps = 54/332 (16%)
Query: 2 EDSQETSPSSNNSSEELSSALHLSKGMSI----FLDILRRADKNDDGKLSFEEFKAYFAD 57
E+SQ SS + LS+ L K L+ +R +KN ++S + +
Sbjct: 1463 EESQSELESSQKEARSLSTELFKLKNAYEESLEHLETFKRENKNLQEEIS--DLTEQLGE 1520
Query: 58 GVLSGEELHELFHTIDTHNTNNLDTEELCEYFSQHLGEYENVLAALEDLNLSILKAMGKT 117
G G+ +HEL L+ E+L + +ALE+ S+ GK
Sbjct: 1521 G---GKNVHELEKV-----RKQLEVEKL------------ELQSALEEAEASLEHEEGKI 1560
Query: 118 KKDYQEASNLEQFVTRFLLKETLNQLQSLQNSLECAMETTEEQTRQERQGPAKPEVLSIQ 177
+ E + ++ + R L ++ Q+ +N QT + + ++ EVL
Sbjct: 1561 LRAQLEFNQIKAEIERKLAEKDEEMEQAKRNHQRVVDSL---QTSLDAETRSRNEVL--- 1614
Query: 178 WPGKRSSRRVQRHNSFSPNSPQFNVSGPGLLEEDNQWMTQINRLQKLIDRLEKKDLKLEP 237
RV++ N + +S + + Q Q+ LQ L+ KD +++
Sbjct: 1615 --------RVKKKMEGDLNEMEIQLSHANRMAAEAQ--KQVKSLQSLL-----KDTQIQL 1659
Query: 238 PEEEIIEGNTKSHIMLVQRQMSVIEEDLEEFQLALKHYVESASSQSGCLRISIQKLSNES 297
+ + K +I +V+R+ ++++ +LEE + ++ S +++ Q+L S
Sbjct: 1660 DDAVRANDDLKENIAIVERRNNLLQAELEELRAVVEQTERSR-------KLAEQELIETS 1712
Query: 298 RYMIYEFWENSSVWNSHLQTNYSKTFQRSNVD 329
+ +N+S+ N + T +S V+
Sbjct: 1713 ERVQLLHSQNTSLINQKKKMESDLTQLQSEVE 1744
>gi|115496169 myosin, heavy chain 7, cardiac muscle, beta [Homo
sapiens]
Length = 1935
Score = 34.7 bits (78), Expect = 0.13
Identities = 63/320 (19%), Positives = 129/320 (40%), Gaps = 45/320 (14%)
Query: 14 SSEELSSALHLSKGMSIFLDILRRADKNDDGKLSFEEFKAYFADGVLSGEELHELFHTID 73
S EL S+ ++ +S L L+ A + S E + + + EE+ +L +
Sbjct: 1463 SQSELESSQKEARSLSTELFKLKNAYEE-----SLEHLETFKRENKNLQEEISDLTEQL- 1516
Query: 74 THNTNNLDTEELCEYFSQHLGEYENVLAALEDLNLSILKAMGKTKKDYQEASNLEQFVTR 133
++ EL + Q E + +ALE+ S+ GK + E + ++ + R
Sbjct: 1517 --GSSGKTIHELEKVRKQLEAEKMELQSALEEAEASLEHEEGKILRAQLEFNQIKAEIER 1574
Query: 134 FLLKETLNQLQSLQNSLECAMETTEEQTRQERQGPAKPEVLSIQWPGKRSSRRVQRHNSF 193
L ++ Q+ +N L QT + + ++ E L RV++
Sbjct: 1575 KLAEKDEEMEQAKRNHLRVVDSL---QTSLDAETRSRNEAL-----------RVKKKMEG 1620
Query: 194 SPNSPQFNVSGPGLLEEDNQWMTQINRLQKLIDRLEKKDLKLEPPEEEIIEGNTKSHIML 253
N + +S + + Q Q+ LQ L+ KD +++ + + K +I +
Sbjct: 1621 DLNEMEIQLSHANRMAAEAQ--KQVKSLQSLL-----KDTQIQLDDAVRANDDLKENIAI 1673
Query: 254 VQRQMSVIEEDLEEFQLALKHYVESASSQSGCLRISIQKLSNESRYMIYEFWENSSVWN- 312
V+R+ ++++ +LEE + ++ S +++ Q+L S + +N+S+ N
Sbjct: 1674 VERRNNLLQAELEELRAVVEQTERSR-------KLAEQELIETSERVQLLHSQNTSLINQ 1726
Query: 313 --------SHLQTNYSKTFQ 324
S LQT + Q
Sbjct: 1727 KKKMDADLSQLQTEVEEAVQ 1746
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.127 0.357
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,376,981
Number of Sequences: 37866
Number of extensions: 598406
Number of successful extensions: 2420
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 166
Number of HSP's that attempted gapping in prelim test: 2262
Number of HSP's gapped (non-prelim): 332
length of query: 351
length of database: 18,247,518
effective HSP length: 103
effective length of query: 248
effective length of database: 14,347,320
effective search space: 3558135360
effective search space used: 3558135360
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.