Guide to the Human Genome
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Name: KIAA0040 Sequence: fasta or formatted (99aa) NCBI GI: 242332496
Description:

hypothetical protein LOC9674

Not currently referenced in the text

Other entries for this name:
alt mRNA {99aa} hypothetical protein LOC9674
alt mRNA {99aa} hypothetical protein LOC9674
alt mRNA {99aa} hypothetical protein LOC9674
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.0          2           1
 C cysteine            5.1          5           2
 D aspartate           3.0          3           1
 E glutamate           6.1          6           2
 F phenylalanine       3.0          3           2
 G glycine             5.1          5           1
 H histidine           2.0          2           1
 I isoleucine          9.1          9           2
 K lysine             15.2         15          10
 L leucine            13.1         13           2
 M methionine          2.0          2           1
 N asparagine          2.0          2           1
 P proline             7.1          7           2
 Q glutamine           5.1          5           2
 R arginine            3.0          3           1
 S serine              6.1          6           2
 T threonine           4.0          4           1
 V valine              3.0          3           1
 W tryptophan          3.0          3           1
 Y tyrosine            1.0          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC9674 
KIAA0040              1.000   hypothetical protein LOC9674 
KIAA0040              1.000   hypothetical protein LOC9674 
KIAA0040              1.000   hypothetical protein LOC9674 
LOC147645             0.076   PREDICTED: hypothetical protein 
LOC147645             0.076   PREDICTED: hypothetical protein 
LOC147645             0.076   PREDICTED: hypothetical protein 
C9orf86               0.059   Rab-like GTP-binding protein 1 isoform 1 
LOC440335             0.059   PREDICTED: hypothetical protein isoform 2 
LOC440335             0.059   PREDICTED: hypothetical protein 
LOC440335             0.059   PREDICTED: hypothetical protein 
LOC440335             0.054   PREDICTED: hypothetical protein isoform 1 
LOC440335             0.054   PREDICTED: hypothetical protein isoform 4 
LOC440335             0.054   PREDICTED: hypothetical protein isoform 2 
MTDH                  0.049   metadherin 
FAT4                  0.043   FAT tumor suppressor homolog 4 
LOC440335             0.043   PREDICTED: hypothetical protein isoform 3 
LOC440335             0.043   PREDICTED: hypothetical protein 
LOC440335             0.043   PREDICTED: hypothetical protein 
MESDC2                0.043   mesoderm development candidate 2 
PCDH9                 0.043   protocadherin 9 isoform 2 precursor 
PCDH9                 0.043   protocadherin 9 isoform 1 precursor 
SRPK1                 0.038   SFRS protein kinase 1 
IGSF5                 0.038   immunoglobulin superfamily 5 like 
ANKHD1                0.038   ankyrin repeat and KH domain containing 1 isoform 1 ...
ANKHD1-EIF4EBP3       0.038   ANKHD1-EIF4EBP3 protein 
AP3D1                 0.032   adaptor-related protein complex 3, delta 1 subunit ...
LOC100294364          0.032   PREDICTED: hypothetical protein 
LOC100294088          0.032   PREDICTED: hypothetical protein, partial 
NMT2                  0.032   N-myristoyltransferase 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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