Guide to the Human Genome
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Name: GNA13 Sequence: fasta or formatted (377aa) NCBI GI: 24111250
Description:

guanine nucleotide binding protein (G protein), alpha 13

Referenced in:

G Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.7         14           2
 C cysteine            1.6          6           1
 D aspartate           7.2         27           1
 E glutamate           6.9         26           2
 F phenylalanine       6.4         24           1
 G glycine             4.5         17           2
 H histidine           2.1          8           2
 I isoleucine          6.1         23           2
 K lysine              6.6         25           1
 L leucine            10.6         40           3
 M methionine          2.7         10           2
 N asparagine          4.2         16           2
 P proline             3.2         12           1
 Q glutamine           5.8         22           3
 R arginine            8.0         30           3
 S serine              6.4         24           3
 T threonine           4.2         16           2
 V valine              6.6         25           1
 W tryptophan          0.8          3           1
 Y tyrosine            2.4          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   guanine nucleotide binding protein (G protein), alph... 
GNA12                 0.617   guanine nucleotide binding protein (G protein) alpha...
GNAQ                  0.401   guanine nucleotide binding protein (G protein), q po...
GNA14                 0.395   G alpha 14 
GNA11                 0.387   guanine nucleotide binding protein (G protein), alp...
GNA15                 0.357   guanine nucleotide binding protein (G protein), alp...
GNAO1                 0.350   guanine nucleotide binding protein, alpha activating...
GNAO1                 0.347   guanine nucleotide binding protein, alpha activatin...
GNAI1                 0.337   guanine nucleotide binding protein (G protein), alph...
GNAI2                 0.332   guanine nucleotide binding protein (G protein), alpha...
GNAI3                 0.327   guanine nucleotide binding protein (G protein), alpha...
GNAZ                  0.323   guanine nucleotide binding protein, alpha z polypepti...
GNAT2                 0.321   guanine nucleotide binding protein, alpha transducin...
GNAT1                 0.320   rod-type transducin alpha subunit 
GNAT1                 0.320   rod-type transducin alpha subunit 
GNAT3                 0.320   guanine nucleotide binding protein, alpha transduci...
GNAS                  0.286   GNAS complex locus isoform g 
GNAS                  0.283   GNAS complex locus GNASS 
GNAL                  0.279   guanine nucleotide binding protein (G protein), alpha...
GNAL                  0.279   guanine nucleotide binding protein (G protein), alp...
GNAS                  0.279   GNAS complex locus GNASL 
GNAS                  0.278   GNAS complex locus isoform f 
GNAS                  0.275   GNAS complex locus XLas 
GNAL                  0.274   guanine nucleotide binding protein (G protein), alph...
ARF6                  0.034   ADP-ribosylation factor 6 
TRIM23                0.027   ADP-ribosylation factor domain protein 1 isoform gam...
TRIM23                0.027   ADP-ribosylation factor domain protein 1 isoform bet...
TRIM23                0.027   ADP-ribosylation factor domain protein 1 isoform alph...
ARF5                  0.025   ADP-ribosylation factor 5 
ARF4                  0.023   ADP-ribosylation factor 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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