Guide to the Human Genome
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Name: GNAO1 Sequence: fasta or formatted (354aa) NCBI GI: 10567816
Description:

guanine nucleotide binding protein, alpha activating polypeptide O isoform a

Referenced in:

G Proteins

Other entries for this name:
alt prot [354aa] guanine nucleotide binding protein, alpha activating polypeptide ...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.3         26           3
 C cysteine            2.8         10           1
 D aspartate           7.3         26           1
 E glutamate           7.6         27           2
 F phenylalanine       4.8         17           2
 G glycine             5.6         20           2
 H histidine           2.0          7           1
 I isoleucine          7.6         27           3
 K lysine              7.3         26           2
 L leucine             7.9         28           4
 M methionine          2.8         10           2
 N asparagine          4.5         16           2
 P proline             2.0          7           1
 Q glutamine           3.4         12           1
 R arginine            4.8         17           1
 S serine              6.5         23           1
 T threonine           6.2         22           2
 V valine              5.1         18           2
 W tryptophan          0.6          2           1
 Y tyrosine            3.7         13           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   guanine nucleotide binding protein, alpha activating... 
GNAO1                 0.945   guanine nucleotide binding protein, alpha activatin...
GNAI1                 0.712   guanine nucleotide binding protein (G protein), alph...
GNAI3                 0.705   guanine nucleotide binding protein (G protein), alpha...
GNAI2                 0.693   guanine nucleotide binding protein (G protein), alpha...
GNAT3                 0.610   guanine nucleotide binding protein, alpha transduci...
GNAT2                 0.602   guanine nucleotide binding protein, alpha transducin...
GNAT1                 0.599   rod-type transducin alpha subunit 
GNAT1                 0.599   rod-type transducin alpha subunit 
GNAZ                  0.578   guanine nucleotide binding protein, alpha z polypepti...
GNA14                 0.468   G alpha 14 
GNAQ                  0.451   guanine nucleotide binding protein (G protein), q po...
GNA11                 0.446   guanine nucleotide binding protein (G protein), alp...
GNA12                 0.374   guanine nucleotide binding protein (G protein) alpha...
GNA13                 0.372   guanine nucleotide binding protein (G protein), alph...
GNA15                 0.356   guanine nucleotide binding protein (G protein), alp...
GNAS                  0.350   GNAS complex locus isoform g 
GNAS                  0.350   GNAS complex locus GNASS 
GNAL                  0.349   guanine nucleotide binding protein (G protein), alpha...
GNAL                  0.349   guanine nucleotide binding protein (G protein), alp...
GNAL                  0.344   guanine nucleotide binding protein (G protein), alph...
GNAS                  0.343   GNAS complex locus XLas 
GNAS                  0.340   GNAS complex locus GNASL 
GNAS                  0.340   GNAS complex locus isoform f 
ARF6                  0.041   ADP-ribosylation factor 6 
TRIM23                0.032   ADP-ribosylation factor domain protein 1 isoform gam...
TRIM23                0.032   ADP-ribosylation factor domain protein 1 isoform bet...
TRIM23                0.032   ADP-ribosylation factor domain protein 1 isoform alph...
ARF1                  0.031   ADP-ribosylation factor 1 
ARF1                  0.031   ADP-ribosylation factor 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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