Guide to the Human Genome
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Name: GNAT3 Sequence: fasta or formatted (354aa) NCBI GI: 156139155
Description:

guanine nucleotide binding protein, alpha transducing 3

Referenced in:

G Proteins
Taste Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         22           2
 C cysteine            2.5          9           1
 D aspartate           6.2         22           1
 E glutamate           8.2         29           2
 F phenylalanine       5.1         18           1
 G glycine             5.1         18           2
 H histidine           2.5          9           1
 I isoleucine          7.1         25           3
 K lysine              8.2         29           2
 L leucine             8.5         30           4
 M methionine          2.8         10           1
 N asparagine          4.8         17           1
 P proline             1.7          6           1
 Q glutamine           4.2         15           1
 R arginine            4.0         14           1
 S serine              7.1         25           2
 T threonine           5.9         21           2
 V valine              5.6         20           1
 W tryptophan          0.6          2           1
 Y tyrosine            3.7         13           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   guanine nucleotide binding protein, alpha transduci... 
GNAT2                 0.827   guanine nucleotide binding protein, alpha transducin...
GNAT1                 0.792   rod-type transducin alpha subunit 
GNAT1                 0.792   rod-type transducin alpha subunit 
GNAI2                 0.714   guanine nucleotide binding protein (G protein), alpha...
GNAI1                 0.710   guanine nucleotide binding protein (G protein), alph...
GNAI3                 0.707   guanine nucleotide binding protein (G protein), alpha...
GNAO1                 0.612   guanine nucleotide binding protein, alpha activating...
GNAO1                 0.608   guanine nucleotide binding protein, alpha activatin...
GNAZ                  0.587   guanine nucleotide binding protein, alpha z polypepti...
GNA14                 0.455   G alpha 14 
GNAQ                  0.449   guanine nucleotide binding protein (G protein), q po...
GNA11                 0.445   guanine nucleotide binding protein (G protein), alp...
GNA15                 0.373   guanine nucleotide binding protein (G protein), alp...
GNA12                 0.372   guanine nucleotide binding protein (G protein) alpha...
GNAS                  0.362   GNAS complex locus isoform g 
GNAL                  0.357   guanine nucleotide binding protein (G protein), alpha...
GNAL                  0.357   guanine nucleotide binding protein (G protein), alp...
GNAS                  0.357   GNAS complex locus GNASS 
GNAL                  0.351   guanine nucleotide binding protein (G protein), alph...
GNAS                  0.350   GNAS complex locus GNASL 
GNAS                  0.348   GNAS complex locus isoform f 
GNAS                  0.344   GNAS complex locus XLas 
GNA13                 0.341   guanine nucleotide binding protein (G protein), alph...
ARF6                  0.028   ADP-ribosylation factor 6 
TRIM23                0.022   ADP-ribosylation factor domain protein 1 isoform gam...
TRIM23                0.022   ADP-ribosylation factor domain protein 1 isoform bet...
TRIM23                0.022   ADP-ribosylation factor domain protein 1 isoform alph...
ARL5B                 0.022   ADP-ribosylation factor-like 8 
ARF1                  0.020   ADP-ribosylation factor 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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