Guide to the Human Genome
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Name: GNA12 Sequence: fasta or formatted (381aa) NCBI GI: 42476111
Description:

guanine nucleotide binding protein (G protein) alpha 12

Referenced in:

G Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         23           1
 C cysteine            0.8          3           1
 D aspartate           6.6         25           1
 E glutamate           6.3         24           1
 F phenylalanine       7.1         27           2
 G glycine             5.5         21           2
 H histidine           2.1          8           2
 I isoleucine          6.0         23           2
 K lysine              6.8         26           2
 L leucine            10.5         40           3
 M methionine          2.6         10           1
 N asparagine          3.7         14           2
 P proline             2.6         10           1
 Q glutamine           4.2         16           1
 R arginine           10.5         40           3
 S serine              6.0         23           3
 T threonine           3.4         13           2
 V valine              6.8         26           2
 W tryptophan          0.8          3           1
 Y tyrosine            1.6          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   guanine nucleotide binding protein (G protein) alpha... 
GNA13                 0.620   guanine nucleotide binding protein (G protein), alph...
GNAQ                  0.382   guanine nucleotide binding protein (G protein), q po...
GNA11                 0.376   guanine nucleotide binding protein (G protein), alp...
GNA14                 0.363   G alpha 14 
GNAO1                 0.353   guanine nucleotide binding protein, alpha activating...
GNAT3                 0.350   guanine nucleotide binding protein, alpha transduci...
GNAO1                 0.346   guanine nucleotide binding protein, alpha activatin...
GNAT2                 0.342   guanine nucleotide binding protein, alpha transducin...
GNAI1                 0.338   guanine nucleotide binding protein (G protein), alph...
GNAZ                  0.338   guanine nucleotide binding protein, alpha z polypepti...
GNA15                 0.337   guanine nucleotide binding protein (G protein), alp...
GNAI3                 0.334   guanine nucleotide binding protein (G protein), alpha...
GNAT1                 0.328   rod-type transducin alpha subunit 
GNAT1                 0.328   rod-type transducin alpha subunit 
GNAI2                 0.326   guanine nucleotide binding protein (G protein), alpha...
GNAS                  0.283   GNAS complex locus isoform g 
GNAS                  0.283   GNAS complex locus GNASS 
GNAL                  0.279   guanine nucleotide binding protein (G protein), alph...
GNAS                  0.277   GNAS complex locus GNASL 
GNAS                  0.277   GNAS complex locus isoform f 
GNAS                  0.276   GNAS complex locus XLas 
GNAL                  0.266   guanine nucleotide binding protein (G protein), alpha...
GNAL                  0.266   guanine nucleotide binding protein (G protein), alp...
ARF6                  0.023   ADP-ribosylation factor 6 
SAR1B                 0.021   SAR1a gene homolog 2 
SAR1B                 0.021   SAR1a gene homolog 2 
SAR1A                 0.021   SAR1a gene homolog 1 
SAR1A                 0.021   SAR1a gene homolog 1 
TRIM23                0.021   ADP-ribosylation factor domain protein 1 isoform gam...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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