Guide to the Human Genome
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Name: GNA11 Sequence: fasta or formatted (359aa) NCBI GI: 115511049
Description:

guanine nucleotide binding protein (G protein), alpha 11 (Gq class)

Referenced in:

G Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         20           2
 C cysteine            1.4          5           2
 D aspartate           7.0         25           1
 E glutamate           8.6         31           2
 F phenylalanine       5.0         18           1
 G glycine             3.3         12           2
 H histidine           1.4          5           1
 I isoleucine          7.5         27           2
 K lysine              6.7         24           2
 L leucine            10.0         36           4
 M methionine          3.1         11           2
 N asparagine          3.9         14           1
 P proline             2.2          8           1
 Q glutamine           4.5         16           2
 R arginine            7.0         25           3
 S serine              5.3         19           2
 T threonine           5.8         21           2
 V valine              6.1         22           1
 W tryptophan          0.8          3           1
 Y tyrosine            4.7         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   guanine nucleotide binding protein (G protein), alp... 
GNAQ                  0.919   guanine nucleotide binding protein (G protein), q po...
GNA14                 0.829   G alpha 14 
GNA15                 0.540   guanine nucleotide binding protein (G protein), alp...
GNAO1                 0.460   guanine nucleotide binding protein, alpha activatin...
GNAI2                 0.451   guanine nucleotide binding protein (G protein), alpha...
GNAI1                 0.451   guanine nucleotide binding protein (G protein), alph...
GNAO1                 0.446   guanine nucleotide binding protein, alpha activating...
GNAI3                 0.446   guanine nucleotide binding protein (G protein), alpha...
GNAT3                 0.443   guanine nucleotide binding protein, alpha transduci...
GNAT1                 0.437   rod-type transducin alpha subunit 
GNAT1                 0.437   rod-type transducin alpha subunit 
GNAT2                 0.431   guanine nucleotide binding protein, alpha transducin...
GNA13                 0.411   guanine nucleotide binding protein (G protein), alph...
GNAZ                  0.406   guanine nucleotide binding protein, alpha z polypepti...
GNA12                 0.398   guanine nucleotide binding protein (G protein) alpha...
GNAL                  0.358   guanine nucleotide binding protein (G protein), alph...
GNAL                  0.351   guanine nucleotide binding protein (G protein), alpha...
GNAL                  0.351   guanine nucleotide binding protein (G protein), alp...
GNAS                  0.350   GNAS complex locus isoform g 
GNAS                  0.345   GNAS complex locus GNASS 
GNAS                  0.338   GNAS complex locus GNASL 
GNAS                  0.338   GNAS complex locus isoform f 
GNAS                  0.321   GNAS complex locus XLas 
ARF5                  0.036   ADP-ribosylation factor 5 
ARF4                  0.033   ADP-ribosylation factor 4 
ARF1                  0.033   ADP-ribosylation factor 1 
ARF1                  0.033   ADP-ribosylation factor 1 
ARF1                  0.033   ADP-ribosylation factor 1 
ARF1                  0.033   ADP-ribosylation factor 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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