Search of human proteins with 240849531

Search of human proteins with 240849531

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|240849531 component of oligomeric golgi complex 5 isoform 1
[Homo sapiens]
         (860 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|240849531 component of oligomeric golgi complex 5 isoform 1 [...  1676   0.0  
gi|240849537 component of oligomeric golgi complex 5 isoform 2 [...  1628   0.0  
gi|240849567 component of oligomeric golgi complex 5 isoform 3 [...  1607   0.0  
gi|50083279 centrosome protein 4 [Homo sapiens]                        39   0.027
gi|223029519 component of oligomeric golgi complex 2 isoform 2 [...    37   0.10 
gi|6678676 component of oligomeric golgi complex 2 isoform 1 [Ho...    37   0.10 
gi|21389505 janus kinase and microtubule interacting protein 1 i...    35   0.23 
gi|150456473 janus kinase and microtubule interacting protein 1 ...    35   0.23 
gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [...    34   0.51 
gi|21735548 centrosomal protein 2 [Homo sapiens]                       33   1.1  
gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]            33   1.1  
gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo...    33   1.1  
gi|157785668 coiled-coil domain containing 39 [Homo sapiens]           33   1.1  
gi|125628636 keratin 80 isoform a [Homo sapiens]                       32   1.9  
gi|125628632 keratin 80 isoform b [Homo sapiens]                       32   1.9  
gi|239744448 PREDICTED: hypothetical protein XP_002343148 [Homo ...    32   2.5  
gi|225903455 tripartite motif-containing 77 [Homo sapiens]             32   2.5  
gi|30089940 Golgi autoantigen, golgin subfamily a, 3 [Homo sapiens]    32   2.5  
gi|219555718 synaptonemal complex central element protein 1 isof...    32   3.3  
gi|219555716 synaptonemal complex central element protein 1 isof...    32   3.3  
gi|18640754 synaptonemal complex central element protein 1 isofo...    32   3.3  
gi|146229340 mutated in colorectal cancers isoform 1 [Homo sapiens]    31   4.3  
gi|4505129 mutated in colorectal cancers isoform 2 [Homo sapiens]      31   4.3  
gi|239756999 PREDICTED: ankyrin repeat domain 62 [Homo sapiens]        31   5.6  
gi|239751514 PREDICTED: ankyrin repeat domain 62 isoform 4 [Homo...    31   5.6  
gi|239746016 PREDICTED: ankyrin repeat domain 62 isoform 1 [Homo...    31   5.6  
gi|170763519 transforming, acidic coiled-coil containing protein...    31   5.6  
gi|170763517 transforming, acidic coiled-coil containing protein...    31   5.6  
gi|226246618 transforming, acidic coiled-coil containing protein...    31   5.6  
gi|55770888 early endosome antigen 1, 162kD [Homo sapiens]             31   5.6  

>gi|240849531 component of oligomeric golgi complex 5 isoform 1
           [Homo sapiens]
          Length = 860

 Score = 1676 bits (4341), Expect = 0.0
 Identities = 860/860 (100%), Positives = 860/860 (100%)

Query: 1   MGWVGGRRRDSASPPGRSRSAADDINPAPANMEGGGGSVAVAGLGARGSGAAAATVRELL 60
           MGWVGGRRRDSASPPGRSRSAADDINPAPANMEGGGGSVAVAGLGARGSGAAAATVRELL
Sbjct: 1   MGWVGGRRRDSASPPGRSRSAADDINPAPANMEGGGGSVAVAGLGARGSGAAAATVRELL 60

Query: 61  QDGCYSDFLNEDFDVKTYTSQSIHQAVIAEQLAKLAQGISQLDRELHLQVVARHEDLLAQ 120
           QDGCYSDFLNEDFDVKTYTSQSIHQAVIAEQLAKLAQGISQLDRELHLQVVARHEDLLAQ
Sbjct: 61  QDGCYSDFLNEDFDVKTYTSQSIHQAVIAEQLAKLAQGISQLDRELHLQVVARHEDLLAQ 120

Query: 121 ATGIESLEGVLQMMQTRIGALQGAVDRIKAKIVEPYNKIVARTAQLARLQVACDLLRRII 180
           ATGIESLEGVLQMMQTRIGALQGAVDRIKAKIVEPYNKIVARTAQLARLQVACDLLRRII
Sbjct: 121 ATGIESLEGVLQMMQTRIGALQGAVDRIKAKIVEPYNKIVARTAQLARLQVACDLLRRII 180

Query: 181 RILNLSKRLQGQLQGGSREITKAAQSLNELDYLSQGIDLSGIEVIENDLLFIARARLEVE 240
           RILNLSKRLQGQLQGGSREITKAAQSLNELDYLSQGIDLSGIEVIENDLLFIARARLEVE
Sbjct: 181 RILNLSKRLQGQLQGGSREITKAAQSLNELDYLSQGIDLSGIEVIENDLLFIARARLEVE 240

Query: 241 NQAKRLLEQGLETQNPTQVGTALQVFYNLGTLKDTITSVVDGYCATLEENINSALDIKVL 300
           NQAKRLLEQGLETQNPTQVGTALQVFYNLGTLKDTITSVVDGYCATLEENINSALDIKVL
Sbjct: 241 NQAKRLLEQGLETQNPTQVGTALQVFYNLGTLKDTITSVVDGYCATLEENINSALDIKVL 300

Query: 301 TQPSQSAVRGGPGRSTMPTPGNTAALRASFWTNMEKLMDHIYAVCGQVQHLQKVLAKKRD 360
           TQPSQSAVRGGPGRSTMPTPGNTAALRASFWTNMEKLMDHIYAVCGQVQHLQKVLAKKRD
Sbjct: 301 TQPSQSAVRGGPGRSTMPTPGNTAALRASFWTNMEKLMDHIYAVCGQVQHLQKVLAKKRD 360

Query: 361 PVSHICFIEEIVKDGQPEIFYTFWNSVTQALSSQFHMATNSSMFLKQAFEGEYPKLLRLY 420
           PVSHICFIEEIVKDGQPEIFYTFWNSVTQALSSQFHMATNSSMFLKQAFEGEYPKLLRLY
Sbjct: 361 PVSHICFIEEIVKDGQPEIFYTFWNSVTQALSSQFHMATNSSMFLKQAFEGEYPKLLRLY 420

Query: 421 NDLWKRLQQYSQHIQGNFNASGTTDLYVDLQHMEDDAQDIFIPKKPDYDPEKALKDSLQP 480
           NDLWKRLQQYSQHIQGNFNASGTTDLYVDLQHMEDDAQDIFIPKKPDYDPEKALKDSLQP
Sbjct: 421 NDLWKRLQQYSQHIQGNFNASGTTDLYVDLQHMEDDAQDIFIPKKPDYDPEKALKDSLQP 480

Query: 481 YEAAYLSKSLSRLFDPINLVFPPGGRNPPSSDELDGIIKTIASELNVAAVDTNLTLAVSK 540
           YEAAYLSKSLSRLFDPINLVFPPGGRNPPSSDELDGIIKTIASELNVAAVDTNLTLAVSK
Sbjct: 481 YEAAYLSKSLSRLFDPINLVFPPGGRNPPSSDELDGIIKTIASELNVAAVDTNLTLAVSK 540

Query: 541 NVAKTIQLYSVKSEQLLSTQGDASQVIGPLTEGQRRNVAVVNSLYKLHQSVTKVVSSQSS 600
           NVAKTIQLYSVKSEQLLSTQGDASQVIGPLTEGQRRNVAVVNSLYKLHQSVTKVVSSQSS
Sbjct: 541 NVAKTIQLYSVKSEQLLSTQGDASQVIGPLTEGQRRNVAVVNSLYKLHQSVTKVVSSQSS 600

Query: 601 FPLAAEQTIISALKAIHALMENAVQPLLTSVGDAIEAIIITMHQEDFSGSLSSSGKPDVP 660
           FPLAAEQTIISALKAIHALMENAVQPLLTSVGDAIEAIIITMHQEDFSGSLSSSGKPDVP
Sbjct: 601 FPLAAEQTIISALKAIHALMENAVQPLLTSVGDAIEAIIITMHQEDFSGSLSSSGKPDVP 660

Query: 661 CSLYMKELQGFIARVMSDYFKHFECLDFVFDNTEAIAQRAVELFIRHASLIRPLGEGGKM 720
           CSLYMKELQGFIARVMSDYFKHFECLDFVFDNTEAIAQRAVELFIRHASLIRPLGEGGKM
Sbjct: 661 CSLYMKELQGFIARVMSDYFKHFECLDFVFDNTEAIAQRAVELFIRHASLIRPLGEGGKM 720

Query: 721 RLAADFAQMELAVGPFCRRVSDLGKSYRMLRSFRPLLFQASEHVASSPALGDVIPFSIII 780
           RLAADFAQMELAVGPFCRRVSDLGKSYRMLRSFRPLLFQASEHVASSPALGDVIPFSIII
Sbjct: 721 RLAADFAQMELAVGPFCRRVSDLGKSYRMLRSFRPLLFQASEHVASSPALGDVIPFSIII 780

Query: 781 QFLFTRAPAELKSPFQRAEWSHTRFSQWLDDHPSEKDRLLLIRGALEAYVQSVRSREGKE 840
           QFLFTRAPAELKSPFQRAEWSHTRFSQWLDDHPSEKDRLLLIRGALEAYVQSVRSREGKE
Sbjct: 781 QFLFTRAPAELKSPFQRAEWSHTRFSQWLDDHPSEKDRLLLIRGALEAYVQSVRSREGKE 840

Query: 841 FAPVYPIMVQLLQKAMSALQ 860
           FAPVYPIMVQLLQKAMSALQ
Sbjct: 841 FAPVYPIMVQLLQKAMSALQ 860


>gi|240849537 component of oligomeric golgi complex 5 isoform 2
           [Homo sapiens]
          Length = 839

 Score = 1628 bits (4215), Expect = 0.0
 Identities = 839/860 (97%), Positives = 839/860 (97%), Gaps = 21/860 (2%)

Query: 1   MGWVGGRRRDSASPPGRSRSAADDINPAPANMEGGGGSVAVAGLGARGSGAAAATVRELL 60
           MGWVGGRRRDSASPPGRSRSAADDINPAPANMEGGGGSVAVAGLGARGSGAAAATVRELL
Sbjct: 1   MGWVGGRRRDSASPPGRSRSAADDINPAPANMEGGGGSVAVAGLGARGSGAAAATVRELL 60

Query: 61  QDGCYSDFLNEDFDVKTYTSQSIHQAVIAEQLAKLAQGISQLDRELHLQVVARHEDLLAQ 120
           QDGCYSDFLNEDFDVKTYTSQSIHQAVIAEQLAKLAQGISQLDRELHLQVVARHEDLLAQ
Sbjct: 61  QDGCYSDFLNEDFDVKTYTSQSIHQAVIAEQLAKLAQGISQLDRELHLQVVARHEDLLAQ 120

Query: 121 ATGIESLEGVLQMMQTRIGALQGAVDRIKAKIVEPYNKIVARTAQLARLQVACDLLRRII 180
           ATGIESLEGVLQMMQTRIGALQGAVDRIKAKIVEPYNKIVARTAQLARLQVACDLLRRII
Sbjct: 121 ATGIESLEGVLQMMQTRIGALQGAVDRIKAKIVEPYNKIVARTAQLARLQVACDLLRRII 180

Query: 181 RILNLSKRLQGQLQGGSREITKAAQSLNELDYLSQGIDLSGIEVIENDLLFIARARLEVE 240
           RILNLSKRLQGQLQGGSREITKAAQSLNELDYLSQGIDLSGIEVIENDLLFIARARLEVE
Sbjct: 181 RILNLSKRLQGQLQGGSREITKAAQSLNELDYLSQGIDLSGIEVIENDLLFIARARLEVE 240

Query: 241 NQAKRLLEQGLETQNPTQVGTALQVFYNLGTLKDTITSVVDGYCATLEENINSALDIKVL 300
           NQAKRLLEQGLETQNPTQVGTALQVFYNLGTLKDTITSVVDGYCATLEENINSALDIKVL
Sbjct: 241 NQAKRLLEQGLETQNPTQVGTALQVFYNLGTLKDTITSVVDGYCATLEENINSALDIKVL 300

Query: 301 TQPSQSAVRGGPGRSTMPTPGNTAALRASFWTNMEKLMDHIYAVCGQVQHLQKVLAKKRD 360
           TQPSQSAVRGGPGRSTMPTPGNTAALRASFWTNMEKLMDHIYAVCGQVQHLQKVLAKKRD
Sbjct: 301 TQPSQSAVRGGPGRSTMPTPGNTAALRASFWTNMEKLMDHIYAVCGQVQHLQKVLAKKRD 360

Query: 361 PVSHICFIEEIVKDGQPEIFYTFWNSVTQALSSQFHMATNSSMFLKQAFEGEYPKLLRLY 420
           PVSHICFIEEIVKDGQPEIFYTFWNSVTQALSSQFHMATNSSMFLKQAFEGEYPKLLRLY
Sbjct: 361 PVSHICFIEEIVKDGQPEIFYTFWNSVTQALSSQFHMATNSSMFLKQAFEGEYPKLLRLY 420

Query: 421 NDLWKRLQQYSQHIQGNFNASGTTDLYVDLQHMEDDAQDIFIPKKPDYDPEKALKDSLQP 480
           NDLWKRLQQYSQHIQGNFNASGTTDLYVDLQHMEDDAQDIFIPKKPDYDPEKALKDSLQP
Sbjct: 421 NDLWKRLQQYSQHIQGNFNASGTTDLYVDLQHMEDDAQDIFIPKKPDYDPEKALKDSLQP 480

Query: 481 YEAAYLSKSLSRLFDPINLVFPPGGRNPPSSDELDGIIKTIASELNVAAVDTNLTLAVSK 540
           YEAAYLSKSLSRLFDPINLVFPPGGRNPPSSDELDGIIKTIASELNVAAVDTNLTLAVSK
Sbjct: 481 YEAAYLSKSLSRLFDPINLVFPPGGRNPPSSDELDGIIKTIASELNVAAVDTNLTLAVSK 540

Query: 541 NVAKTIQLYSVKSEQLLSTQGDASQVIGPLTEGQRRNVAVVNSLYKLHQSVTKVVSSQSS 600
           NVAKTIQLYSVKSEQLLSTQGDASQVIGPLTEGQRRNVAVVNSLYKLHQSVT        
Sbjct: 541 NVAKTIQLYSVKSEQLLSTQGDASQVIGPLTEGQRRNVAVVNSLYKLHQSVT-------- 592

Query: 601 FPLAAEQTIISALKAIHALMENAVQPLLTSVGDAIEAIIITMHQEDFSGSLSSSGKPDVP 660
                        KAIHALMENAVQPLLTSVGDAIEAIIITMHQEDFSGSLSSSGKPDVP
Sbjct: 593 -------------KAIHALMENAVQPLLTSVGDAIEAIIITMHQEDFSGSLSSSGKPDVP 639

Query: 661 CSLYMKELQGFIARVMSDYFKHFECLDFVFDNTEAIAQRAVELFIRHASLIRPLGEGGKM 720
           CSLYMKELQGFIARVMSDYFKHFECLDFVFDNTEAIAQRAVELFIRHASLIRPLGEGGKM
Sbjct: 640 CSLYMKELQGFIARVMSDYFKHFECLDFVFDNTEAIAQRAVELFIRHASLIRPLGEGGKM 699

Query: 721 RLAADFAQMELAVGPFCRRVSDLGKSYRMLRSFRPLLFQASEHVASSPALGDVIPFSIII 780
           RLAADFAQMELAVGPFCRRVSDLGKSYRMLRSFRPLLFQASEHVASSPALGDVIPFSIII
Sbjct: 700 RLAADFAQMELAVGPFCRRVSDLGKSYRMLRSFRPLLFQASEHVASSPALGDVIPFSIII 759

Query: 781 QFLFTRAPAELKSPFQRAEWSHTRFSQWLDDHPSEKDRLLLIRGALEAYVQSVRSREGKE 840
           QFLFTRAPAELKSPFQRAEWSHTRFSQWLDDHPSEKDRLLLIRGALEAYVQSVRSREGKE
Sbjct: 760 QFLFTRAPAELKSPFQRAEWSHTRFSQWLDDHPSEKDRLLLIRGALEAYVQSVRSREGKE 819

Query: 841 FAPVYPIMVQLLQKAMSALQ 860
           FAPVYPIMVQLLQKAMSALQ
Sbjct: 820 FAPVYPIMVQLLQKAMSALQ 839


>gi|240849567 component of oligomeric golgi complex 5 isoform 3
           [Homo sapiens]
          Length = 823

 Score = 1607 bits (4162), Expect = 0.0
 Identities = 823/823 (100%), Positives = 823/823 (100%)

Query: 1   MGWVGGRRRDSASPPGRSRSAADDINPAPANMEGGGGSVAVAGLGARGSGAAAATVRELL 60
           MGWVGGRRRDSASPPGRSRSAADDINPAPANMEGGGGSVAVAGLGARGSGAAAATVRELL
Sbjct: 1   MGWVGGRRRDSASPPGRSRSAADDINPAPANMEGGGGSVAVAGLGARGSGAAAATVRELL 60

Query: 61  QDGCYSDFLNEDFDVKTYTSQSIHQAVIAEQLAKLAQGISQLDRELHLQVVARHEDLLAQ 120
           QDGCYSDFLNEDFDVKTYTSQSIHQAVIAEQLAKLAQGISQLDRELHLQVVARHEDLLAQ
Sbjct: 61  QDGCYSDFLNEDFDVKTYTSQSIHQAVIAEQLAKLAQGISQLDRELHLQVVARHEDLLAQ 120

Query: 121 ATGIESLEGVLQMMQTRIGALQGAVDRIKAKIVEPYNKIVARTAQLARLQVACDLLRRII 180
           ATGIESLEGVLQMMQTRIGALQGAVDRIKAKIVEPYNKIVARTAQLARLQVACDLLRRII
Sbjct: 121 ATGIESLEGVLQMMQTRIGALQGAVDRIKAKIVEPYNKIVARTAQLARLQVACDLLRRII 180

Query: 181 RILNLSKRLQGQLQGGSREITKAAQSLNELDYLSQGIDLSGIEVIENDLLFIARARLEVE 240
           RILNLSKRLQGQLQGGSREITKAAQSLNELDYLSQGIDLSGIEVIENDLLFIARARLEVE
Sbjct: 181 RILNLSKRLQGQLQGGSREITKAAQSLNELDYLSQGIDLSGIEVIENDLLFIARARLEVE 240

Query: 241 NQAKRLLEQGLETQNPTQVGTALQVFYNLGTLKDTITSVVDGYCATLEENINSALDIKVL 300
           NQAKRLLEQGLETQNPTQVGTALQVFYNLGTLKDTITSVVDGYCATLEENINSALDIKVL
Sbjct: 241 NQAKRLLEQGLETQNPTQVGTALQVFYNLGTLKDTITSVVDGYCATLEENINSALDIKVL 300

Query: 301 TQPSQSAVRGGPGRSTMPTPGNTAALRASFWTNMEKLMDHIYAVCGQVQHLQKVLAKKRD 360
           TQPSQSAVRGGPGRSTMPTPGNTAALRASFWTNMEKLMDHIYAVCGQVQHLQKVLAKKRD
Sbjct: 301 TQPSQSAVRGGPGRSTMPTPGNTAALRASFWTNMEKLMDHIYAVCGQVQHLQKVLAKKRD 360

Query: 361 PVSHICFIEEIVKDGQPEIFYTFWNSVTQALSSQFHMATNSSMFLKQAFEGEYPKLLRLY 420
           PVSHICFIEEIVKDGQPEIFYTFWNSVTQALSSQFHMATNSSMFLKQAFEGEYPKLLRLY
Sbjct: 361 PVSHICFIEEIVKDGQPEIFYTFWNSVTQALSSQFHMATNSSMFLKQAFEGEYPKLLRLY 420

Query: 421 NDLWKRLQQYSQHIQGNFNASGTTDLYVDLQHMEDDAQDIFIPKKPDYDPEKALKDSLQP 480
           NDLWKRLQQYSQHIQGNFNASGTTDLYVDLQHMEDDAQDIFIPKKPDYDPEKALKDSLQP
Sbjct: 421 NDLWKRLQQYSQHIQGNFNASGTTDLYVDLQHMEDDAQDIFIPKKPDYDPEKALKDSLQP 480

Query: 481 YEAAYLSKSLSRLFDPINLVFPPGGRNPPSSDELDGIIKTIASELNVAAVDTNLTLAVSK 540
           YEAAYLSKSLSRLFDPINLVFPPGGRNPPSSDELDGIIKTIASELNVAAVDTNLTLAVSK
Sbjct: 481 YEAAYLSKSLSRLFDPINLVFPPGGRNPPSSDELDGIIKTIASELNVAAVDTNLTLAVSK 540

Query: 541 NVAKTIQLYSVKSEQLLSTQGDASQVIGPLTEGQRRNVAVVNSLYKLHQSVTKVVSSQSS 600
           NVAKTIQLYSVKSEQLLSTQGDASQVIGPLTEGQRRNVAVVNSLYKLHQSVTKVVSSQSS
Sbjct: 541 NVAKTIQLYSVKSEQLLSTQGDASQVIGPLTEGQRRNVAVVNSLYKLHQSVTKVVSSQSS 600

Query: 601 FPLAAEQTIISALKAIHALMENAVQPLLTSVGDAIEAIIITMHQEDFSGSLSSSGKPDVP 660
           FPLAAEQTIISALKAIHALMENAVQPLLTSVGDAIEAIIITMHQEDFSGSLSSSGKPDVP
Sbjct: 601 FPLAAEQTIISALKAIHALMENAVQPLLTSVGDAIEAIIITMHQEDFSGSLSSSGKPDVP 660

Query: 661 CSLYMKELQGFIARVMSDYFKHFECLDFVFDNTEAIAQRAVELFIRHASLIRPLGEGGKM 720
           CSLYMKELQGFIARVMSDYFKHFECLDFVFDNTEAIAQRAVELFIRHASLIRPLGEGGKM
Sbjct: 661 CSLYMKELQGFIARVMSDYFKHFECLDFVFDNTEAIAQRAVELFIRHASLIRPLGEGGKM 720

Query: 721 RLAADFAQMELAVGPFCRRVSDLGKSYRMLRSFRPLLFQASEHVASSPALGDVIPFSIII 780
           RLAADFAQMELAVGPFCRRVSDLGKSYRMLRSFRPLLFQASEHVASSPALGDVIPFSIII
Sbjct: 721 RLAADFAQMELAVGPFCRRVSDLGKSYRMLRSFRPLLFQASEHVASSPALGDVIPFSIII 780

Query: 781 QFLFTRAPAELKSPFQRAEWSHTRFSQWLDDHPSEKDRLLLIR 823
           QFLFTRAPAELKSPFQRAEWSHTRFSQWLDDHPSEKDRLLLIR
Sbjct: 781 QFLFTRAPAELKSPFQRAEWSHTRFSQWLDDHPSEKDRLLLIR 823


>gi|50083279 centrosome protein 4 [Homo sapiens]
          Length = 1140

 Score = 38.5 bits (88), Expect = 0.027
 Identities = 52/240 (21%), Positives = 94/240 (39%), Gaps = 31/240 (12%)

Query: 74  DVKTYTSQSIHQAVIAEQLAKLAQGISQLDRELHLQVVARHEDLLAQATGIESLEGVLQM 133
           +V +Y         IA+ L      I +L +E+H       E L    +G+      +++
Sbjct: 181 EVSSYPVPQPDDPYIADLLQVADNRIQELQQEVH----QLQEKLAMMESGVRDYSKQIEL 236

Query: 134 MQTRIGALQGAVDRIKAKIV---EPYNKIVARTAQLARLQVAC------DLLRRIIRILN 184
            +  I  L  A+D  ++  V   E  NK   +      +QV        DL +RI  ++ 
Sbjct: 237 REREIERLSVALDGGRSPDVLSLESRNKTNEKLIAHLNIQVDFLQQANKDLEKRIRELME 296

Query: 185 LSKRLQGQLQGGSREITKAAQSLNELDYLSQGIDLSGIEVIENDLLFIARARLEV----- 239
             + +  ++   S +  K  Q L E+D L+Q ++    EV+E     +  A+ E+     
Sbjct: 297 TKETVTSEVVNLSNKNEKLCQELTEIDQLAQQLERHKEEVLETADKELGEAKKEIKRKLS 356

Query: 240 ------ENQAKRLLEQGLETQNPTQVGTALQVFYNLGTL-------KDTITSVVDGYCAT 286
                 E  AK  LE  L  +   ++   L V  +L T+       K  ++  V+ +  T
Sbjct: 357 EMQDLEETMAKLQLELNLCQKEKERLSDELLVKSDLETVVHQLEQEKQRLSKKVESFAVT 416


>gi|223029519 component of oligomeric golgi complex 2 isoform 2
           [Homo sapiens]
          Length = 737

 Score = 36.6 bits (83), Expect = 0.10
 Identities = 37/224 (16%), Positives = 90/224 (40%), Gaps = 18/224 (8%)

Query: 67  DFLNEDFDVKTYTSQSIHQAVIAEQLAKLAQGISQLDRELHLQVVARHEDLLAQATGIES 126
           +F+ EDFDV  + S    +  + E    L      L   +   +   + D +  +T +  
Sbjct: 21  EFMKEDFDVDHFVSDCRKRVQLEELRDDLELYYKLLKTAMVELINKDYADFVNLSTNLVG 80

Query: 127 LEGVLQMMQTRIGALQGAVDRIKAKIVEPYNKIVARTAQLARLQVACDLLRRIIRILNLS 186
           ++  L  +   +G L+  V  +++ + E    +  R ++   ++     + R+I+++   
Sbjct: 81  MDKALNQLSVPLGQLREEVLSLRSSVSEGIRAVDERMSKQEDIRKKKMCVLRLIQVIRSV 140

Query: 187 KRLQGQLQGGSREITKA----------------AQSLNELDYLSQGIDLSGIEVIENDLL 230
           ++++  L   S + T A                A   N+L +    +   G+ +++    
Sbjct: 141 EKIEKILNSQSSKETSALEASSPLLTGQILERIATEFNQLQF--HAVQSKGMPLLDKVRP 198

Query: 231 FIARARLEVENQAKRLLEQGLETQNPTQVGTALQVFYNLGTLKD 274
            IA     ++   + LL +GL+T +   +   L+ +  +   +D
Sbjct: 199 RIAGITAMLQQSLEGLLLEGLQTSDVDIIRHCLRTYATIDKTRD 242


>gi|6678676 component of oligomeric golgi complex 2 isoform 1 [Homo
           sapiens]
          Length = 738

 Score = 36.6 bits (83), Expect = 0.10
 Identities = 37/224 (16%), Positives = 90/224 (40%), Gaps = 18/224 (8%)

Query: 67  DFLNEDFDVKTYTSQSIHQAVIAEQLAKLAQGISQLDRELHLQVVARHEDLLAQATGIES 126
           +F+ EDFDV  + S    +  + E    L      L   +   +   + D +  +T +  
Sbjct: 21  EFMKEDFDVDHFVSDCRKRVQLEELRDDLELYYKLLKTAMVELINKDYADFVNLSTNLVG 80

Query: 127 LEGVLQMMQTRIGALQGAVDRIKAKIVEPYNKIVARTAQLARLQVACDLLRRIIRILNLS 186
           ++  L  +   +G L+  V  +++ + E    +  R ++   ++     + R+I+++   
Sbjct: 81  MDKALNQLSVPLGQLREEVLSLRSSVSEGIRAVDERMSKQEDIRKKKMCVLRLIQVIRSV 140

Query: 187 KRLQGQLQGGSREITKA----------------AQSLNELDYLSQGIDLSGIEVIENDLL 230
           ++++  L   S + T A                A   N+L +    +   G+ +++    
Sbjct: 141 EKIEKILNSQSSKETSALEASSPLLTGQILERIATEFNQLQF--HAVQSKGMPLLDKVRP 198

Query: 231 FIARARLEVENQAKRLLEQGLETQNPTQVGTALQVFYNLGTLKD 274
            IA     ++   + LL +GL+T +   +   L+ +  +   +D
Sbjct: 199 RIAGITAMLQQSLEGLLLEGLQTSDVDIIRHCLRTYATIDKTRD 242


>gi|21389505 janus kinase and microtubule interacting protein 1
           isoform 2 [Homo sapiens]
          Length = 626

 Score = 35.4 bits (80), Expect = 0.23
 Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 21/170 (12%)

Query: 81  QSIHQAVIAEQLAKLAQGISQLDRELHLQVVARHEDLLAQATGIESLEGVLQMMQTRIGA 140
           Q  H A I+E  AKL +  ++  + L   ++ +HE   A+   I+  EG LQ +Q  +  
Sbjct: 62  QRRHTAYISELKAKLHEEKTKELQALREGLIRQHEQEAARTAKIK--EGELQRLQATLNV 119

Query: 141 LQ-GAVDRIKAKIVEPYNKIVARTAQLARLQVACDLLRRIIRILNLSKRLQGQLQGGSRE 199
           L+ GA D++K  ++    +   R     RL++  ++L               +L+   ++
Sbjct: 120 LRDGAADKVKTALLTEAREEARRAFDGERLRLQQEIL---------------ELKAARKQ 164

Query: 200 ITKAAQSLNELDYLSQGIDLSGIEVIENDLLFIARARLEVENQAKRLLEQ 249
             +A  +  + D  ++  DL        D   + R + E E   +RL+++
Sbjct: 165 AEEALSNCMQAD-KTKAADLRAAYQAHQD--EVHRIKRECERDIRRLMDE 211


>gi|150456473 janus kinase and microtubule interacting protein 1
           isoform 1 [Homo sapiens]
          Length = 831

 Score = 35.4 bits (80), Expect = 0.23
 Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 21/170 (12%)

Query: 81  QSIHQAVIAEQLAKLAQGISQLDRELHLQVVARHEDLLAQATGIESLEGVLQMMQTRIGA 140
           Q  H A I+E  AKL +  ++  + L   ++ +HE   A+   I+  EG LQ +Q  +  
Sbjct: 62  QRRHTAYISELKAKLHEEKTKELQALREGLIRQHEQEAARTAKIK--EGELQRLQATLNV 119

Query: 141 LQ-GAVDRIKAKIVEPYNKIVARTAQLARLQVACDLLRRIIRILNLSKRLQGQLQGGSRE 199
           L+ GA D++K  ++    +   R     RL++  ++L               +L+   ++
Sbjct: 120 LRDGAADKVKTALLTEAREEARRAFDGERLRLQQEIL---------------ELKAARKQ 164

Query: 200 ITKAAQSLNELDYLSQGIDLSGIEVIENDLLFIARARLEVENQAKRLLEQ 249
             +A  +  + D  ++  DL        D   + R + E E   +RL+++
Sbjct: 165 AEEALSNCMQAD-KTKAADLRAAYQAHQD--EVHRIKRECERDIRRLMDE 211


>gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [Homo
            sapiens]
          Length = 1937

 Score = 34.3 bits (77), Expect = 0.51
 Identities = 42/171 (24%), Positives = 76/171 (44%), Gaps = 7/171 (4%)

Query: 86   AVIAEQLAKLAQGISQLDRELHLQVVARHEDLLAQATGIESLEGVLQMMQTRIGALQGAV 145
            A + EQ+  L +   +L++E   ++    +DL + A  I   +G L+ M     +L+  V
Sbjct: 1204 AELGEQIDNLQRVKQKLEKEKS-ELKMETDDLSSNAEAISKAKGNLEKM---CRSLEDQV 1259

Query: 146  DRIKAKIVEPYNKIVARTAQLARLQV-ACDLLRRIIRILNLSKRLQGQLQGGSREITKAA 204
              +K K  E    I   TAQ ARLQ  A +  R++     L  +L    Q  +++I +  
Sbjct: 1260 SELKTKEEEQQRLINDLTAQRARLQTEAGEYSRQLDEKDALVSQLSRSKQASTQQIEELK 1319

Query: 205  QSLNELDYLSQGIDLSGIEVIENDLLFIARARLEVENQAKRLLEQGLETQN 255
              L E +  ++      ++   +D   + R + E E + K  L++ L   N
Sbjct: 1320 HQLEE-ETKAKNALAHALQSSRHD-CDLLREQYEEEQEGKAELQRALSKAN 1368


>gi|21735548 centrosomal protein 2 [Homo sapiens]
          Length = 2442

 Score = 33.1 bits (74), Expect = 1.1
 Identities = 28/110 (25%), Positives = 53/110 (48%), Gaps = 4/110 (3%)

Query: 100  SQLDRELHLQVVARHEDLLAQATGIESLEGVLQMMQTRIGALQGAVDRIKAKIVEPYNKI 159
            SQLD E    +  R ++L A     +  +G  + ++ +  ALQGA+++    + E + ++
Sbjct: 1803 SQLD-EAQRALAQRDQELEALQQEQQQAQGQEERVKEKADALQGALEQAHMTLKERHGEL 1861

Query: 160  VARTAQLARLQVACDLLRRIIRILNLSKRLQGQLQGGSREITKAAQSLNE 209
                 Q  RL+    +  R ++ L   + + G L+  SRE  KA  +L +
Sbjct: 1862 QDHKEQARRLEEELAVEGRRVQAL---EEVLGDLRAESREQEKALLALQQ 1908


>gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 257

 Score = 33.1 bits (74), Expect = 1.1
 Identities = 21/55 (38%), Positives = 24/55 (43%), Gaps = 4/55 (7%)

Query: 6   GRRRDSASPP----GRSRSAADDINPAPANMEGGGGSVAVAGLGARGSGAAAATV 56
           GRR   A PP    GR R+AA   +PAP    G    V  AG     S A   +V
Sbjct: 95  GRRAGPAGPPCRAPGRGRAAATRRSPAPGTARGSPAGVERAGGATAASSAGTRSV 149


>gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo
            sapiens]
          Length = 1939

 Score = 33.1 bits (74), Expect = 1.1
 Identities = 42/173 (24%), Positives = 73/173 (42%), Gaps = 11/173 (6%)

Query: 86   AVIAEQLAKLAQGISQLDRELHLQVVARHEDLLAQATGIESLEGVLQMMQTRIGALQGAV 145
            A + EQ+  L +   +L++E   ++    +DL +    +   +G L+ M     AL+  +
Sbjct: 1205 AELGEQIDNLQRVKQKLEKEKS-EMKMEIDDLASNMETVSKAKGNLEKM---CRALEDQL 1260

Query: 146  DRIKAKIVEPYNKIVARTAQLARLQVACDLLRRIIRILNLSKRLQGQLQGGSREITKAAQ 205
              IK K  E    I   TAQ ARLQ          R L+    L  QL  G +  T+  +
Sbjct: 1261 SEIKTKEEEQQRLINDLTAQRARLQTESG---EYSRQLDEKDTLVSQLSRGKQAFTQQIE 1317

Query: 206  SLN---ELDYLSQGIDLSGIEVIENDLLFIARARLEVENQAKRLLEQGLETQN 255
             L    E +  ++      ++   +D   + R + E E +AK  L++ +   N
Sbjct: 1318 ELKRQLEEEIKAKSALAHALQSSRHD-CDLLREQYEEEQEAKAELQRAMSKAN 1369


>gi|157785668 coiled-coil domain containing 39 [Homo sapiens]
          Length = 941

 Score = 33.1 bits (74), Expect = 1.1
 Identities = 46/187 (24%), Positives = 87/187 (46%), Gaps = 24/187 (12%)

Query: 80  SQSIHQAVIAEQLAKLAQGISQLDRELH--LQVVARHEDLLAQATGIESLEGVLQMMQTR 137
           S+   +A+   +L ++   I +L+ E+   L+  +  E+ + +AT  + L+G+   M   
Sbjct: 82  SEEHFKAIAQRELGRVKDEIQRLENEMASILEKKSDKENGIFKAT--QKLDGLKCQMNWD 139

Query: 138 IGALQGAVDRIKAK-----IVEPY-----NKIVARTAQLARLQVACDLLRRIIRILNLSK 187
             AL+  ++    K      ++ Y     NKI A T QL RL + C+  R+I+    L++
Sbjct: 140 QQALEAWLEESAHKDSDALTLQKYAQQDDNKIRALTLQLERLTLECNQKRKILD-NELTE 198

Query: 188 RLQGQLQGGSREITKAAQSLNELDYLSQGIDLSGIEVIENDLLFIARARLEVENQAKRLL 247
            +  QL     E+ KAAQ   ++    Q +    I+  EN +  + +   +++N A  L 
Sbjct: 199 TISAQL-----ELDKAAQDFRKIHNERQEL----IKQWENTIEQMQKRDGDIDNCALELA 249

Query: 248 EQGLETQ 254
               ET+
Sbjct: 250 RIKQETR 256


>gi|125628636 keratin 80 isoform a [Homo sapiens]
          Length = 452

 Score = 32.3 bits (72), Expect = 1.9
 Identities = 57/229 (24%), Positives = 96/229 (41%), Gaps = 51/229 (22%)

Query: 84  HQAVIAEQLAKLAQGISQLDRELHLQVVA-------RHEDLLAQATGIESLEGVLQM--- 133
           +Q  + E+L K++Q   QL+  L LQV+        R+ED +++ T +E     L+    
Sbjct: 135 YQGRLQEELRKVSQERGQLEANL-LQVLEKVEEFRIRYEDEISKRTDMEFTFVQLKKDLD 193

Query: 134 --------MQTRIGALQGAVDRIKAKIVEPYNKIVARTAQLARLQVACDLLRRIIRILNL 185
                   ++T++ +L+  V+ +K  I E   K +A   +   + V  D  R  I +  +
Sbjct: 194 AECLHRTELETKLKSLESFVELMKT-IYEQELKDLAAQVKDVSVTVGMDS-RCHIDLSGI 251

Query: 186 SKRLQGQLQGGSREITKAAQSLNELDYLSQGIDLSGIEVIENDLLFIARARLEVENQAKR 245
            + ++ Q          AA+SL E +                     A +R ++E QA R
Sbjct: 252 VEEVKAQYDA------VAARSLEEAE---------------------AYSRSQLEEQAAR 284

Query: 246 LLEQGLETQNPTQVGTALQVFYNLGTLKDTITSVVDGYCATLEENINSA 294
             E G   Q+       L V   +  L+  I SV   +C  LEENI +A
Sbjct: 285 SAEYGSSLQSSRSEIADLNV--RIQKLRSQILSV-KSHCLKLEENIKTA 330


>gi|125628632 keratin 80 isoform b [Homo sapiens]
          Length = 422

 Score = 32.3 bits (72), Expect = 1.9
 Identities = 57/229 (24%), Positives = 96/229 (41%), Gaps = 51/229 (22%)

Query: 84  HQAVIAEQLAKLAQGISQLDRELHLQVVA-------RHEDLLAQATGIESLEGVLQM--- 133
           +Q  + E+L K++Q   QL+  L LQV+        R+ED +++ T +E     L+    
Sbjct: 135 YQGRLQEELRKVSQERGQLEANL-LQVLEKVEEFRIRYEDEISKRTDMEFTFVQLKKDLD 193

Query: 134 --------MQTRIGALQGAVDRIKAKIVEPYNKIVARTAQLARLQVACDLLRRIIRILNL 185
                   ++T++ +L+  V+ +K  I E   K +A   +   + V  D  R  I +  +
Sbjct: 194 AECLHRTELETKLKSLESFVELMKT-IYEQELKDLAAQVKDVSVTVGMDS-RCHIDLSGI 251

Query: 186 SKRLQGQLQGGSREITKAAQSLNELDYLSQGIDLSGIEVIENDLLFIARARLEVENQAKR 245
            + ++ Q          AA+SL E +                     A +R ++E QA R
Sbjct: 252 VEEVKAQYDA------VAARSLEEAE---------------------AYSRSQLEEQAAR 284

Query: 246 LLEQGLETQNPTQVGTALQVFYNLGTLKDTITSVVDGYCATLEENINSA 294
             E G   Q+       L V   +  L+  I SV   +C  LEENI +A
Sbjct: 285 SAEYGSSLQSSRSEIADLNV--RIQKLRSQILSV-KSHCLKLEENIKTA 330


>gi|239744448 PREDICTED: hypothetical protein XP_002343148 [Homo
           sapiens]
          Length = 450

 Score = 32.0 bits (71), Expect = 2.5
 Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 3/78 (3%)

Query: 398 ATNSSMFLKQAFEGEYPKLLRLYNDLWKRLQQYSQHIQGNFNASGTTDLYVDLQHMEDDA 457
           AT+     ++A E    KLL     +WK+ Q+  +++    N  GT +++++L+ M   A
Sbjct: 122 ATHKHYMTREADEYYRKKLLIQMKSIWKKKQKNQRNLNRETNIIGTWEVFINLRSMMISA 181

Query: 458 QDIFIPKKPDYDPEKALK 475
           +    PK   Y  E+  K
Sbjct: 182 E---YPKVCQYLREEEQK 196


>gi|225903455 tripartite motif-containing 77 [Homo sapiens]
          Length = 450

 Score = 32.0 bits (71), Expect = 2.5
 Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 3/78 (3%)

Query: 398 ATNSSMFLKQAFEGEYPKLLRLYNDLWKRLQQYSQHIQGNFNASGTTDLYVDLQHMEDDA 457
           AT+     ++A E    KLL     +WK+ Q+  +++    N  GT +++++L+ M   A
Sbjct: 122 ATHKHYMTREADEYYRKKLLIQMKSIWKKKQKNQRNLNRETNIIGTWEVFINLRSMMISA 181

Query: 458 QDIFIPKKPDYDPEKALK 475
           +    PK   Y  E+  K
Sbjct: 182 E---YPKVCQYLREEEQK 196


>gi|30089940 Golgi autoantigen, golgin subfamily a, 3 [Homo sapiens]
          Length = 1498

 Score = 32.0 bits (71), Expect = 2.5
 Identities = 61/288 (21%), Positives = 120/288 (41%), Gaps = 38/288 (13%)

Query: 90  EQLAKLAQGISQLDREL-HLQVVARHEDLLAQATGIESLEGVLQMMQTRIGALQGAVDRI 148
           +QLA   +   +L  E+ H+QV    +  L +   +E++    Q+ +T+  +++    RI
Sbjct: 580 QQLALAQEARVRLQGEMAHIQVGQMTQAGLLEHLKLENVSLSQQLTETQHRSMKEK-GRI 638

Query: 149 KAKIVEPYNKIVARTAQLARLQVACDLLRRIIRILNLSKRLQGQLQGGSREITKAAQSLN 208
            A++      ++ + A   ++Q A  ++       +L +RL+ + +G    + + A S  
Sbjct: 639 AAQLQGIEADMLDQEAAFMQIQEAKTMVEE-----DLQRRLE-EFEGERERLQRMADSAA 692

Query: 209 ELDYLSQGIDLS------GIEVIENDLLFIARARLEVENQAKRLLEQGLETQNPTQVGTA 262
            L+   + + L+       +E ++ + L + + +L +  +A +  EQ L+         A
Sbjct: 693 SLEQQLEQVKLTLLQRDQQLEALQQEHLDLMK-QLTLTQEALQSREQSLD---------A 742

Query: 263 LQVFYN-----LGTLKDTITSVVDGYCATLEENINSALDIKVLTQPSQSAVRGGPGRSTM 317
           LQ  Y+     LG L+    S  D  C    E I     ++      +   RG   R   
Sbjct: 743 LQTHYDELQARLGELQGEAASREDTICLLQNEKIILEAALQAAKSGKEELDRGAR-RLEE 801

Query: 318 PTPGNTAALRASFWTNMEKLMDHIYAVCGQVQHLQKVLAKKRDPVSHI 365
            T   +  L        EKL + +    GQV+HLQ+  A  +  +  I
Sbjct: 802 GTEETSETL--------EKLREELAIKSGQVEHLQQETAALKKQMQKI 841


>gi|219555718 synaptonemal complex central element protein 1 isoform
           4 [Homo sapiens]
          Length = 351

 Score = 31.6 bits (70), Expect = 3.3
 Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 4/96 (4%)

Query: 332 TNMEKLMDHIYAVCGQVQHLQKVLAKKRDPVSHICFIEEIVKDGQPEIFYTFWNSVTQ-- 389
           T  E L   + ++ G+  HL+++L+KK++ +  I  +    K+ +    +T      +  
Sbjct: 79  TICEALQKELDSLHGEKVHLKEILSKKQETL-RILRLHCQEKESEAHRKHTMLQECKERI 137

Query: 390 -ALSSQFHMATNSSMFLKQAFEGEYPKLLRLYNDLW 424
            AL+ Q     N    L+ AFE +   L+  + DLW
Sbjct: 138 SALNLQIEEEKNKQRQLRLAFEEQLEDLMGQHKDLW 173


>gi|219555716 synaptonemal complex central element protein 1 isoform
           3 [Homo sapiens]
          Length = 318

 Score = 31.6 bits (70), Expect = 3.3
 Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 4/96 (4%)

Query: 332 TNMEKLMDHIYAVCGQVQHLQKVLAKKRDPVSHICFIEEIVKDGQPEIFYTFWNSVTQ-- 389
           T  E L   + ++ G+  HL+++L+KK++ +  I  +    K+ +    +T      +  
Sbjct: 79  TICEALQKELDSLHGEKVHLKEILSKKQETL-RILRLHCQEKESEAHRKHTMLQECKERI 137

Query: 390 -ALSSQFHMATNSSMFLKQAFEGEYPKLLRLYNDLW 424
            AL+ Q     N    L+ AFE +   L+  + DLW
Sbjct: 138 SALNLQIEEEKNKQRQLRLAFEEQLEDLMGQHKDLW 173


>gi|18640754 synaptonemal complex central element protein 1 isoform
           1 [Homo sapiens]
          Length = 282

 Score = 31.6 bits (70), Expect = 3.3
 Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 4/96 (4%)

Query: 332 TNMEKLMDHIYAVCGQVQHLQKVLAKKRDPVSHICFIEEIVKDGQPEIFYTFWNSVTQ-- 389
           T  E L   + ++ G+  HL+++L+KK++ +  I  +    K+ +    +T      +  
Sbjct: 43  TICEALQKELDSLHGEKVHLKEILSKKQETL-RILRLHCQEKESEAHRKHTMLQECKERI 101

Query: 390 -ALSSQFHMATNSSMFLKQAFEGEYPKLLRLYNDLW 424
            AL+ Q     N    L+ AFE +   L+  + DLW
Sbjct: 102 SALNLQIEEEKNKQRQLRLAFEEQLEDLMGQHKDLW 137


>gi|146229340 mutated in colorectal cancers isoform 1 [Homo sapiens]
          Length = 1019

 Score = 31.2 bits (69), Expect = 4.3
 Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 7/109 (6%)

Query: 518  IKTIASELNVAAVDTNLTLAVSKNVAKTIQLYSV-----KSEQLLSTQGDASQVIGPLTE 572
            ++T  SE  +AA  TN      K  A+  +L S      KS ++   Q  +++ +  L  
Sbjct: 900  LRTTCSENELAAEFTNAIRREKKLKARVQELVSALERLTKSSEIRHQQ--SAEFVNDLKR 957

Query: 573  GQRRNVAVVNSLYKLHQSVTKVVSSQSSFPLAAEQTIISALKAIHALME 621
                 VA      K HQ+  K + SQ    +   +T +  LK   AL+E
Sbjct: 958  ANSNLVAAYEKAKKKHQNKLKKLESQMMAMVERHETQVRMLKQRIALLE 1006


>gi|4505129 mutated in colorectal cancers isoform 2 [Homo sapiens]
          Length = 829

 Score = 31.2 bits (69), Expect = 4.3
 Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 7/109 (6%)

Query: 518 IKTIASELNVAAVDTNLTLAVSKNVAKTIQLYSV-----KSEQLLSTQGDASQVIGPLTE 572
           ++T  SE  +AA  TN      K  A+  +L S      KS ++   Q  +++ +  L  
Sbjct: 710 LRTTCSENELAAEFTNAIRREKKLKARVQELVSALERLTKSSEIRHQQ--SAEFVNDLKR 767

Query: 573 GQRRNVAVVNSLYKLHQSVTKVVSSQSSFPLAAEQTIISALKAIHALME 621
                VA      K HQ+  K + SQ    +   +T +  LK   AL+E
Sbjct: 768 ANSNLVAAYEKAKKKHQNKLKKLESQMMAMVERHETQVRMLKQRIALLE 816


>gi|239756999 PREDICTED: ankyrin repeat domain 62 [Homo sapiens]
          Length = 917

 Score = 30.8 bits (68), Expect = 5.6
 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 4/55 (7%)

Query: 84  HQAVIAEQLAKLAQGISQLDRELHLQVVARHEDLLAQATGIESLEGVLQMMQTRI 138
           H  ++++QL+K     S L+ ELH +     E L  +   IE ++GVL   Q R+
Sbjct: 698 HIQILSQQLSKAESTSSGLETELHYE----REALKEKTLHIEHMQGVLSRTQRRL 748


>gi|239751514 PREDICTED: ankyrin repeat domain 62 isoform 4 [Homo
           sapiens]
          Length = 917

 Score = 30.8 bits (68), Expect = 5.6
 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 4/55 (7%)

Query: 84  HQAVIAEQLAKLAQGISQLDRELHLQVVARHEDLLAQATGIESLEGVLQMMQTRI 138
           H  ++++QL+K     S L+ ELH +     E L  +   IE ++GVL   Q R+
Sbjct: 698 HIQILSQQLSKAESTSSGLETELHYE----REALKEKTLHIEHMQGVLSRTQRRL 748


>gi|239746016 PREDICTED: ankyrin repeat domain 62 isoform 1 [Homo
           sapiens]
          Length = 917

 Score = 30.8 bits (68), Expect = 5.6
 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 4/55 (7%)

Query: 84  HQAVIAEQLAKLAQGISQLDRELHLQVVARHEDLLAQATGIESLEGVLQMMQTRI 138
           H  ++++QL+K     S L+ ELH +     E L  +   IE ++GVL   Q R+
Sbjct: 698 HIQILSQQLSKAESTSSGLETELHYE----REALKEKTLHIEHMQGVLSRTQRRL 748


>gi|170763519 transforming, acidic coiled-coil containing protein 1
           isoform 2 [Homo sapiens]
          Length = 395

 Score = 30.8 bits (68), Expect = 5.6
 Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 4/90 (4%)

Query: 64  CYSDFLNE-DFDVKTYTSQSIHQAVIAEQLAKLAQGISQLDRELHLQVVARHEDLLAQAT 122
           C  D+L     + + Y +  IH     E+L K  + I+Q+  +   +  A H  L  +  
Sbjct: 305 CAQDYLARVKQEEQRYQALKIHAE---EKLDKANEEIAQVRTKAKAESAALHAGLRKEQM 361

Query: 123 GIESLEGVLQMMQTRIGALQGAVDRIKAKI 152
            +ESLE  LQ     I  L    D + AK+
Sbjct: 362 KVESLERALQQKNQEIEELTKICDELIAKL 391


>gi|170763517 transforming, acidic coiled-coil containing protein 1
           isoform 1 [Homo sapiens]
          Length = 805

 Score = 30.8 bits (68), Expect = 5.6
 Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 4/90 (4%)

Query: 64  CYSDFLNE-DFDVKTYTSQSIHQAVIAEQLAKLAQGISQLDRELHLQVVARHEDLLAQAT 122
           C  D+L     + + Y +  IH     E+L K  + I+Q+  +   +  A H  L  +  
Sbjct: 715 CAQDYLARVKQEEQRYQALKIHAE---EKLDKANEEIAQVRTKAKAESAALHAGLRKEQM 771

Query: 123 GIESLEGVLQMMQTRIGALQGAVDRIKAKI 152
            +ESLE  LQ     I  L    D + AK+
Sbjct: 772 KVESLERALQQKNQEIEELTKICDELIAKL 801


>gi|226246618 transforming, acidic coiled-coil containing protein 1
           isoform 3 [Homo sapiens]
          Length = 610

 Score = 30.8 bits (68), Expect = 5.6
 Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 4/90 (4%)

Query: 64  CYSDFLNE-DFDVKTYTSQSIHQAVIAEQLAKLAQGISQLDRELHLQVVARHEDLLAQAT 122
           C  D+L     + + Y +  IH     E+L K  + I+Q+  +   +  A H  L  +  
Sbjct: 520 CAQDYLARVKQEEQRYQALKIHAE---EKLDKANEEIAQVRTKAKAESAALHAGLRKEQM 576

Query: 123 GIESLEGVLQMMQTRIGALQGAVDRIKAKI 152
            +ESLE  LQ     I  L    D + AK+
Sbjct: 577 KVESLERALQQKNQEIEELTKICDELIAKL 606


>gi|55770888 early endosome antigen 1, 162kD [Homo sapiens]
          Length = 1411

 Score = 30.8 bits (68), Expect = 5.6
 Identities = 41/177 (23%), Positives = 69/177 (38%), Gaps = 23/177 (12%)

Query: 88  IAEQLAKLAQGISQLDRELHLQVVARHEDLLAQATGIESLEGVLQMMQTRIGALQGAVD- 146
           + E+L   ++   Q    LH QV  +   L A    + SLE  +  + +++   +  V  
Sbjct: 580 LTEKLKNQSESHKQAQENLHDQVQEQKAHLRAAQDRVLSLETSVNELNSQLNESKEKVSQ 639

Query: 147 ---RIKAKIVEPYNKIVARTAQLARLQVACDLLRRIIRILNLSKRLQGQLQGGSREITKA 203
              +IKAK     +   A+TAQ A LQ             N     Q  LQ   +E+ K 
Sbjct: 640 LDIQIKAKTELLLSAEAAKTAQRADLQ-------------NHLDTAQNALQDKQQELNKI 686

Query: 204 AQSLNELDYLSQGID------LSGIEVIENDLLFIARARLEVENQAKRLLEQGLETQ 254
              L+++    Q          S ++  +   L + +   E+E Q K+L    LE +
Sbjct: 687 TTQLDQVTAKLQDKQEHCSQLESHLKEYKEKYLSLEQKTEELEGQIKKLEADSLEVK 743


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.133    0.377 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,579,471
Number of Sequences: 37866
Number of extensions: 1263037
Number of successful extensions: 4893
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 4866
Number of HSP's gapped (non-prelim): 56
length of query: 860
length of database: 18,247,518
effective HSP length: 111
effective length of query: 749
effective length of database: 14,044,392
effective search space: 10519249608
effective search space used: 10519249608
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.