Search of human proteins with 239915976

Search of human proteins with 239915976

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239915976 RAB19, member RAS oncogene family [Homo sapiens]
         (217 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239915976 RAB19, member RAS oncogene family [Homo sapiens]         438   e-123
gi|50234889 RAB43 protein [Homo sapiens]                              236   8e-63
gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo sap...   186   2e-47
gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens]          183   9e-47
gi|7706563 RAB8B, member RAS oncogene family [Homo sapiens]           182   1e-46
gi|21361418 RAB30, member RAS oncogene family [Homo sapiens]          182   1e-46
gi|16933567 mel transforming oncogene [Homo sapiens]                  179   2e-45
gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene fa...   174   4e-44
gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens]            174   4e-44
gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens]            174   4e-44
gi|4506363 RAB13, member RAS oncogene family [Homo sapiens]           174   5e-44
gi|46361978 RAB26, member RAS oncogene family [Homo sapiens]          168   4e-42
gi|21361884 RAB2B protein isoform 1 [Homo sapiens]                    167   5e-42
gi|4506365 RAB2A, member RAS oncogene family [Homo sapiens]           166   1e-41
gi|4758984 Ras-related protein Rab-11A [Homo sapiens]                 164   7e-41
gi|190358517 RAB11B, member RAS oncogene family [Homo sapiens]        163   1e-40
gi|33695095 ras-related GTP-binding protein RAB10 [Homo sapiens]      163   1e-40
gi|19923483 GTPase Rab14 [Homo sapiens]                               163   1e-40
gi|54859685 RAB37, member RAS oncogene family isoform 2 [Homo sa...   162   2e-40
gi|116812567 RAB25 [Homo sapiens]                                     161   3e-40
gi|28376635 RAB37, member RAS oncogene family isoform 3 [Homo sa...   157   5e-39
gi|106507164 RAB12, member RAS oncogene family [Homo sapiens]         154   4e-38
gi|5803135 RAB35, member RAS oncogene family [Homo sapiens]           154   6e-38
gi|19923260 RAB4A, member RAS oncogene family [Homo sapiens]          154   7e-38
gi|4759000 RAB3D, member RAS oncogene family [Homo sapiens]           153   1e-37
gi|82659107 ras-related GTP-binding protein 4b [Homo sapiens]         151   4e-37
gi|19923750 RAB3B, member RAS oncogene family [Homo sapiens]          150   8e-37
gi|4758996 Ras-related protein Rab-33A [Homo sapiens]                 150   8e-37
gi|19923985 RAB3C, member RAS oncogene family [Homo sapiens]          149   1e-36
gi|13786129 RAB33B, member RAS oncogene family [Homo sapiens]         148   4e-36

>gi|239915976 RAB19, member RAS oncogene family [Homo sapiens]
          Length = 217

 Score =  438 bits (1127), Expect = e-123
 Identities = 217/217 (100%), Positives = 217/217 (100%)

Query: 1   MHFSSSARAADENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLD 60
           MHFSSSARAADENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLD
Sbjct: 1   MHFSSSARAADENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLD 60

Query: 61  IDGKKVKMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGA 120
           IDGKKVKMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGA
Sbjct: 61  IDGKKVKMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGA 120

Query: 121 ANVVIMLIGNKCDLWEKRHVLFEDACTLAEKYGLLAVLETSAKESKNIEEVFVLMAKELI 180
           ANVVIMLIGNKCDLWEKRHVLFEDACTLAEKYGLLAVLETSAKESKNIEEVFVLMAKELI
Sbjct: 121 ANVVIMLIGNKCDLWEKRHVLFEDACTLAEKYGLLAVLETSAKESKNIEEVFVLMAKELI 180

Query: 181 ARNSLHLYGESALNGLPLDSSPVLMAQGPSEKTHCTC 217
           ARNSLHLYGESALNGLPLDSSPVLMAQGPSEKTHCTC
Sbjct: 181 ARNSLHLYGESALNGLPLDSSPVLMAQGPSEKTHCTC 217


>gi|50234889 RAB43 protein [Homo sapiens]
          Length = 212

 Score =  236 bits (603), Expect = 8e-63
 Identities = 109/193 (56%), Positives = 153/193 (79%)

Query: 11  DENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQV 70
           DE +D+LFK++L+GD++VGKTCVVQ FK+G ++E Q +TIGVDFT+++L+I GK+VK+Q+
Sbjct: 12  DEQYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQI 71

Query: 71  WDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLIGN 130
           WDTAGQERFRTITQSYYRSA+ AI+AYD+T+RS+F S+PHWI ++ KY  +N+V +LIGN
Sbjct: 72  WDTAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIGN 131

Query: 131 KCDLWEKRHVLFEDACTLAEKYGLLAVLETSAKESKNIEEVFVLMAKELIARNSLHLYGE 190
           K DL E R V   +A +LAE Y +L  +ETSAK+S N+EE F+ +A ELI R+   L+ E
Sbjct: 132 KSDLSELREVSLAEAQSLAEHYDILCAIETSAKDSSNVEEAFLRVATELIMRHGGPLFSE 191

Query: 191 SALNGLPLDSSPV 203
            + + + L+S  +
Sbjct: 192 KSPDHIQLNSKDI 204


>gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo
           sapiens]
          Length = 205

 Score =  186 bits (471), Expect = 2e-47
 Identities = 90/196 (45%), Positives = 133/196 (67%), Gaps = 2/196 (1%)

Query: 14  FDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQVWDT 73
           +DYLFK++LIGDS VGK+C++  F    YTE+  +TIGVDF +R++++DGK +K+Q+WDT
Sbjct: 8   YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67

Query: 74  AGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLIGNKCD 133
           AGQERFRTIT SYYR AH  I+ YD+T + +F ++  W+ EI++Y + NV  +L+GNKCD
Sbjct: 68  AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 127

Query: 134 LWEKRHVLFEDACTLAEKYGLLAVLETSAKESKNIEEVFVLMAKELIAR-NSLHLYGESA 192
           L  K+ V +  A   A+  G +  LETSAK + N+E+ F+ MA E+  R       G + 
Sbjct: 128 LTTKKVVDYTTAKEFADSLG-IPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAE 186

Query: 193 LNGLPLDSSPVLMAQG 208
            + + + S+PV  + G
Sbjct: 187 KSNVKIQSTPVKQSGG 202


>gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens]
          Length = 201

 Score =  183 bits (465), Expect = 9e-47
 Identities = 90/195 (46%), Positives = 129/195 (66%), Gaps = 1/195 (0%)

Query: 14  FDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQVWDT 73
           +DYLFK++LIGDS VGK+C++  F    YTE+  +TIGVDF +R++++DGK +K+Q+WDT
Sbjct: 5   YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64

Query: 74  AGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLIGNKCD 133
           AGQERFRTIT SYYR AH  I+ YD+T + ++ ++  W+ EI++Y + NV  +L+GNK D
Sbjct: 65  AGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSD 124

Query: 134 LWEKRHVLFEDACTLAEKYGLLAVLETSAKESKNIEEVFVLMAKELIARNSLHLYGESAL 193
           L  K+ V    A   A+  G +  LETSAK + N+E+ F+ MA E+  R           
Sbjct: 125 LTTKKVVDNTTAKEFADSLG-IPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGER 183

Query: 194 NGLPLDSSPVLMAQG 208
             L +DS+PV  A G
Sbjct: 184 PNLKIDSTPVKPAGG 198


>gi|7706563 RAB8B, member RAS oncogene family [Homo sapiens]
          Length = 207

 Score =  182 bits (463), Expect = 1e-46
 Identities = 87/202 (43%), Positives = 136/202 (67%), Gaps = 5/202 (2%)

Query: 12  ENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQVW 71
           + +DYLFK++LIGDS VGKTC++  F    +  T  +TIG+DF +R++++DGKK+K+Q+W
Sbjct: 3   KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 62

Query: 72  DTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLIGNK 131
           DTAGQERFRTIT +YYR A   ++ YD+T   +F++I +WI  IE++ +++V  M++GNK
Sbjct: 63  DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNK 122

Query: 132 CDLWEKRHVLFEDACTLAEKYGLLAVLETSAKESKNIEEVFVLMAKELIARNSLHLYGES 191
           CD+ +KR V  E    LA  YG +  LETSAK S N+EE F  +A++++ + +  +   +
Sbjct: 123 CDMNDKRQVSKERGEKLAIDYG-IKFLETSAKSSANVEEAFFTLARDIMTKLNRKMNDSN 181

Query: 192 ALNGLPLDSSPVLMAQGPSEKT 213
           +         PV + +  S+KT
Sbjct: 182 SAGA----GGPVKITENRSKKT 199


>gi|21361418 RAB30, member RAS oncogene family [Homo sapiens]
          Length = 203

 Score =  182 bits (463), Expect = 1e-46
 Identities = 96/206 (46%), Positives = 142/206 (68%), Gaps = 10/206 (4%)

Query: 12  ENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQVW 71
           E++D+LFKI+LIG++ VGKTC+V+ F  G++   Q  TIGVDF +++++I+G+KVK+Q+W
Sbjct: 4   EDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIW 63

Query: 72  DTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLIGNK 131
           DTAGQERFR+ITQSYYRSA+A I+ YD+T   +F  +P W+ EIE+Y +  V+ +L+GNK
Sbjct: 64  DTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNK 123

Query: 132 CDLWEKRHVLFEDACTLAEKYGLLAVLETSAKESKNIEEVFVLMAKELIARNSLHLYGES 191
            DL E+R V  + A   +E   +   LETSAKES N+E++F+ +A  LI+        E+
Sbjct: 124 IDLAERREVSQQRAEEFSEAQDMY-YLETSAKESDNVEKLFLDLACRLIS--------EA 174

Query: 192 ALNGLPLDSSPVLMAQGPSEKTHCTC 217
             N L  + S  L  +G S  ++ TC
Sbjct: 175 RQNTLVNNVSSPLPGEGKS-ISYLTC 199


>gi|16933567 mel transforming oncogene [Homo sapiens]
          Length = 207

 Score =  179 bits (454), Expect = 2e-45
 Identities = 84/180 (46%), Positives = 126/180 (70%), Gaps = 1/180 (0%)

Query: 12  ENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQVW 71
           + +DYLFK++LIGDS VGKTCV+  F    +  T  +TIG+DF +R++++DGK++K+Q+W
Sbjct: 3   KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIW 62

Query: 72  DTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLIGNK 131
           DTAGQERFRTIT +YYR A   ++ YD+T   +F++I +WI  IE++ +A+V  M++GNK
Sbjct: 63  DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNK 122

Query: 132 CDLWEKRHVLFEDACTLAEKYGLLAVLETSAKESKNIEEVFVLMAKELIARNSLHLYGES 191
           CD+ +KR V  E    LA  YG +  +ETSAK + N+E  F  +A+++ A+    L G S
Sbjct: 123 CDVNDKRQVSKERGEKLALDYG-IKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNS 181


>gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene
           family [Homo sapiens]
          Length = 327

 Score =  174 bits (442), Expect = 4e-44
 Identities = 82/170 (48%), Positives = 122/170 (71%), Gaps = 1/170 (0%)

Query: 14  FDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQVWDT 73
           +D+LFK++LIGDS VGKTC++  F    +  T  +TIG+DF +R++DI+GKK+K+QVWDT
Sbjct: 129 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDT 188

Query: 74  AGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLIGNKCD 133
           AGQERF+TIT +YYR A   I+AYD+T   +FE+I +W+  I +  +A V  +L+GNKCD
Sbjct: 189 AGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLGNKCD 248

Query: 134 LWEKRHVLFEDACTLAEKYGLLAVLETSAKESKNIEEVFVLMAKELIARN 183
           +  KR V  E A  LA ++G +   ETSAK S N++E F  +A++++ ++
Sbjct: 249 MEAKRKVQKEQADKLAREHG-IRFFETSAKSSMNVDEAFSSLARDILLKS 297


>gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens]
          Length = 327

 Score =  174 bits (442), Expect = 4e-44
 Identities = 82/170 (48%), Positives = 122/170 (71%), Gaps = 1/170 (0%)

Query: 14  FDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQVWDT 73
           +D+LFK++LIGDS VGKTC++  F    +  T  +TIG+DF +R++DI+GKK+K+QVWDT
Sbjct: 129 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDT 188

Query: 74  AGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLIGNKCD 133
           AGQERF+TIT +YYR A   I+AYD+T   +FE+I +W+  I +  +A V  +L+GNKCD
Sbjct: 189 AGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLGNKCD 248

Query: 134 LWEKRHVLFEDACTLAEKYGLLAVLETSAKESKNIEEVFVLMAKELIARN 183
           +  KR V  E A  LA ++G +   ETSAK S N++E F  +A++++ ++
Sbjct: 249 MEAKRKVQKEQADKLAREHG-IRFFETSAKSSMNVDEAFSSLARDILLKS 297


>gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens]
          Length = 327

 Score =  174 bits (442), Expect = 4e-44
 Identities = 82/170 (48%), Positives = 122/170 (71%), Gaps = 1/170 (0%)

Query: 14  FDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQVWDT 73
           +D+LFK++LIGDS VGKTC++  F    +  T  +TIG+DF +R++DI+GKK+K+QVWDT
Sbjct: 129 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDT 188

Query: 74  AGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLIGNKCD 133
           AGQERF+TIT +YYR A   I+AYD+T   +FE+I +W+  I +  +A V  +L+GNKCD
Sbjct: 189 AGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLGNKCD 248

Query: 134 LWEKRHVLFEDACTLAEKYGLLAVLETSAKESKNIEEVFVLMAKELIARN 183
           +  KR V  E A  LA ++G +   ETSAK S N++E F  +A++++ ++
Sbjct: 249 MEAKRKVQKEQADKLAREHG-IRFFETSAKSSMNVDEAFSSLARDILLKS 297


>gi|4506363 RAB13, member RAS oncogene family [Homo sapiens]
          Length = 203

 Score =  174 bits (441), Expect = 5e-44
 Identities = 81/170 (47%), Positives = 122/170 (71%), Gaps = 1/170 (0%)

Query: 14  FDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQVWDT 73
           +D+LFK++LIGDS VGKTC++  F    +  T  +TIG+DF +R++DI+GKK+K+QVWDT
Sbjct: 5   YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDT 64

Query: 74  AGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLIGNKCD 133
           AGQERF+TIT +YYR A   I+ YD+T   +FE+I +W+  I++  +A V  +L+GNKCD
Sbjct: 65  AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCD 124

Query: 134 LWEKRHVLFEDACTLAEKYGLLAVLETSAKESKNIEEVFVLMAKELIARN 183
           +  KR V  E A  LA ++G +   ETSAK S N++E F  +A++++ ++
Sbjct: 125 MEAKRKVQKEQADKLAREHG-IRFFETSAKSSMNVDEAFSSLARDILLKS 173


>gi|46361978 RAB26, member RAS oncogene family [Homo sapiens]
          Length = 256

 Score =  168 bits (425), Expect = 4e-42
 Identities = 82/171 (47%), Positives = 120/171 (70%), Gaps = 2/171 (1%)

Query: 14  FDYLFKIILIGDSNVGKTCVVQHFKSGVYTE-TQQNTIGVDFTVRSLDIDGKKVKMQVWD 72
           +D  FK++L+GDS VGKTC++  FK G +   T  +T+G+DF  + LD+DG KVK+Q+WD
Sbjct: 60  YDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWD 119

Query: 73  TAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLIGNKC 132
           TAGQERFR++T +YYR AHA ++ YD+T +++F++I  W+ EI +Y   +V +ML+GNK 
Sbjct: 120 TAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVALMLLGNKV 179

Query: 133 DLWEKRHVLFEDACTLAEKYGLLAVLETSAKESKNIEEVFVLMAKELIARN 183
           D   +R V  ED   LA++YG L  +ETSAK   N++  F  +AKEL  R+
Sbjct: 180 DSAHERVVKREDGEKLAKEYG-LPFMETSAKTGLNVDLAFTAIAKELKQRS 229


>gi|21361884 RAB2B protein isoform 1 [Homo sapiens]
          Length = 216

 Score =  167 bits (424), Expect = 5e-42
 Identities = 85/199 (42%), Positives = 129/199 (64%), Gaps = 3/199 (1%)

Query: 14  FDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQVWDT 73
           + YLFK I+IGD+ VGK+C++  F    +      TIGV+F  R ++IDGK++K+Q+WDT
Sbjct: 3   YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDT 62

Query: 74  AGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLIGNKCD 133
           AGQE FR+IT+SYYR A  A++ YD+TRR TF  +  W+ +  ++ ++N+VIMLIGNK D
Sbjct: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSD 122

Query: 134 LWEKRHVLFEDACTLAEKYGLLAVLETSAKESKNIEEVFVLMAKELIARNSLHLYG-ESA 192
           L  +R V  E+    A ++GL+  +ETSAK + N+EE F+  AKE+  +    L+   + 
Sbjct: 123 LESRRDVKREEGEAFAREHGLI-FMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHNE 181

Query: 193 LNGLPL-DSSPVLMAQGPS 210
            NG+ +     +  + GPS
Sbjct: 182 ANGIKIGPQQSISTSVGPS 200


>gi|4506365 RAB2A, member RAS oncogene family [Homo sapiens]
          Length = 212

 Score =  166 bits (420), Expect = 1e-41
 Identities = 79/166 (47%), Positives = 114/166 (68%), Gaps = 1/166 (0%)

Query: 14  FDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQVWDT 73
           + YLFK I+IGD+ VGK+C++  F    +      TIGV+F  R + IDGK++K+Q+WDT
Sbjct: 3   YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62

Query: 74  AGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLIGNKCD 133
           AGQE FR+IT+SYYR A  A++ YD+TRR TF  +  W+ +  ++  +N+VIMLIGNK D
Sbjct: 63  AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSD 122

Query: 134 LWEKRHVLFEDACTLAEKYGLLAVLETSAKESKNIEEVFVLMAKEL 179
           L  +R V  E+    A ++GL+  +ETSAK + N+EE F+  AKE+
Sbjct: 123 LESRREVKKEEGEAFAREHGLI-FMETSAKTASNVEEAFINTAKEI 167


>gi|4758984 Ras-related protein Rab-11A [Homo sapiens]
          Length = 216

 Score =  164 bits (414), Expect = 7e-41
 Identities = 76/169 (44%), Positives = 114/169 (67%), Gaps = 1/169 (0%)

Query: 11  DENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQV 70
           D+ +DYLFK++LIGDS VGK+ ++  F    +    ++TIGV+F  RS+ +DGK +K Q+
Sbjct: 5   DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64

Query: 71  WDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLIGN 130
           WDTAGQER+R IT +YYR A  A++ YD+ +  T+E++  W+ E+  +  +N+VIML+GN
Sbjct: 65  WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124

Query: 131 KCDLWEKRHVLFEDACTLAEKYGLLAVLETSAKESKNIEEVFVLMAKEL 179
           K DL   R V  ++A   AEK G L+ +ETSA +S N+E  F  +  E+
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNG-LSFIETSALDSTNVEAAFQTILTEI 172


>gi|190358517 RAB11B, member RAS oncogene family [Homo sapiens]
          Length = 218

 Score =  163 bits (412), Expect = 1e-40
 Identities = 76/169 (44%), Positives = 114/169 (67%), Gaps = 1/169 (0%)

Query: 11  DENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQV 70
           D+ +DYLFK++LIGDS VGK+ ++  F    +    ++TIGV+F  RS+ +DGK +K Q+
Sbjct: 5   DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64

Query: 71  WDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLIGN 130
           WDTAGQER+R IT +YYR A  A++ YD+ +  T+E++  W+ E+  +  +N+VIML+GN
Sbjct: 65  WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124

Query: 131 KCDLWEKRHVLFEDACTLAEKYGLLAVLETSAKESKNIEEVFVLMAKEL 179
           K DL   R V  ++A   AEK   L+ +ETSA +S N+EE F  +  E+
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNN-LSFIETSALDSTNVEEAFKNILTEI 172


>gi|33695095 ras-related GTP-binding protein RAB10 [Homo sapiens]
          Length = 200

 Score =  163 bits (412), Expect = 1e-40
 Identities = 76/173 (43%), Positives = 119/173 (68%), Gaps = 1/173 (0%)

Query: 10  ADENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQ 69
           A + +D LFK++LIGDS VGKTCV+  F    +  T  +TIG+DF ++++++ GKK+K+Q
Sbjct: 2   AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61

Query: 70  VWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLIG 129
           +WDTAGQERF TIT SYYR A   ++ YD+T   +FE+I  W+  I+++   +V  ML+G
Sbjct: 62  IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLG 121

Query: 130 NKCDLWEKRHVLFEDACTLAEKYGLLAVLETSAKESKNIEEVFVLMAKELIAR 182
           NKCD+ +KR V       +A ++G +   ETSAK + NIE+ F+ +A++++ +
Sbjct: 122 NKCDMDDKRVVPKGKGGQIAREHG-IRFFETSAKANINIEKAFLTLAEDILRK 173


>gi|19923483 GTPase Rab14 [Homo sapiens]
          Length = 215

 Score =  163 bits (412), Expect = 1e-40
 Identities = 78/170 (45%), Positives = 114/170 (67%), Gaps = 1/170 (0%)

Query: 10  ADENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQ 69
           A  N+ Y+FK I+IGD  VGK+C++  F    +     +TIGV+F  R +++ G+K+K+Q
Sbjct: 4   APYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQ 63

Query: 70  VWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLIG 129
           +WDTAGQERFR +T+SYYR A  A++ YD+TRRST+  +  W+ +       N VI+LIG
Sbjct: 64  IWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIG 123

Query: 130 NKCDLWEKRHVLFEDACTLAEKYGLLAVLETSAKESKNIEEVFVLMAKEL 179
           NK DL  +R V +E+A   AE+ GLL  LE SAK  +N+E+ F+  AK++
Sbjct: 124 NKADLEAQRDVTYEEAKQFAEENGLL-FLEASAKTGENVEDAFLEAAKKI 172


>gi|54859685 RAB37, member RAS oncogene family isoform 2 [Homo
           sapiens]
          Length = 223

 Score =  162 bits (411), Expect = 2e-40
 Identities = 79/168 (47%), Positives = 117/168 (69%), Gaps = 2/168 (1%)

Query: 13  NFDYLFKIILIGDSNVGKTCVVQHFKSGVYTE-TQQNTIGVDFTVRSLDIDGKKVKMQVW 71
           ++D   K++L+GD+ VGKTC +  FK G +   T   T+G+DF  + + +DG +VK+Q+W
Sbjct: 25  SYDLTGKVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQIW 84

Query: 72  DTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLIGNK 131
           DTAGQERFR++T +YYR A A ++ YD+T +S+F++I  W+ EI +Y   +VVIML+GNK
Sbjct: 85  DTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNK 144

Query: 132 CDLWEKRHVLFEDACTLAEKYGLLAVLETSAKESKNIEEVFVLMAKEL 179
            D+  +R +  ED  TLA +YG +  LETSAK   N+E  F+ +AKEL
Sbjct: 145 ADMSSERVIRSEDGETLAREYG-VPFLETSAKTGMNVELAFLAIAKEL 191


>gi|116812567 RAB25 [Homo sapiens]
          Length = 213

 Score =  161 bits (408), Expect = 3e-40
 Identities = 81/205 (39%), Positives = 124/205 (60%), Gaps = 1/205 (0%)

Query: 11  DENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQV 70
           +E+++++FK++LIG+S VGKT ++  F    ++   + TIGV+F+ R++ +    VK Q+
Sbjct: 6   EEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQI 65

Query: 71  WDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLIGN 130
           WDTAG ER+R IT +YYR A  A++ +DLT+  T+  +  W+ E+  +  A +V+ML+GN
Sbjct: 66  WDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGN 125

Query: 131 KCDLWEKRHVLFEDACTLAEKYGLLAVLETSAKESKNIEEVFVLMAKELIARNSLHLYGE 190
           K DL + R V  E+A   AE  GLL  LETSA +S N+E  F  + KE+ A+ S      
Sbjct: 126 KSDLSQAREVPTEEARMFAENNGLL-FLETSALDSTNVELAFETVLKEIFAKVSKQRQNS 184

Query: 191 SALNGLPLDSSPVLMAQGPSEKTHC 215
              N + L S+      GP EK  C
Sbjct: 185 IRTNAITLGSAQAGQEPGPGEKRAC 209


>gi|28376635 RAB37, member RAS oncogene family isoform 3 [Homo
           sapiens]
          Length = 216

 Score =  157 bits (398), Expect = 5e-39
 Identities = 80/170 (47%), Positives = 115/170 (67%), Gaps = 2/170 (1%)

Query: 11  DENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQN-TIGVDFTVRSLDIDGKKVKMQ 69
           D N   L K IL+GDS VGKT ++  F  G +     + T+G+ FT + + +DG +VK+Q
Sbjct: 16  DFNDHVLHKTILVGDSGVGKTSLLVQFDQGKFIPGSFSATVGIGFTNKVVTVDGVRVKLQ 75

Query: 70  VWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLIG 129
           +WDTAGQERFR++T +YYR A A ++ YD+T +S+F++I  W+ EI +Y   +VVIML+G
Sbjct: 76  IWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLG 135

Query: 130 NKCDLWEKRHVLFEDACTLAEKYGLLAVLETSAKESKNIEEVFVLMAKEL 179
           NK D+  +R +  ED  TLA +YG +  LETSAK   N+E  F+ +AKEL
Sbjct: 136 NKADMSSERVIRSEDGETLAREYG-VPFLETSAKTGMNVELAFLAIAKEL 184


>gi|106507164 RAB12, member RAS oncogene family [Homo sapiens]
          Length = 244

 Score =  154 bits (390), Expect = 4e-38
 Identities = 68/204 (33%), Positives = 124/204 (60%), Gaps = 1/204 (0%)

Query: 15  DYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQVWDTA 74
           D+  ++I+IG   VGKT +++ F    + E  ++T+GVDF ++++++ GKK+++Q+WDTA
Sbjct: 40  DFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTA 99

Query: 75  GQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLIGNKCDL 134
           GQERF +IT +YYRSA   I+ YD+T++ TF+ +P W+  I+KY + +  ++L+GNK D 
Sbjct: 100 GQERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDC 159

Query: 135 WEKRHVLFEDACTLAEKYGLLAVLETSAKESKNIEEVFVLMAKELIARNSLHLYGESALN 194
              R +  +     A++   +   E SAK++ N++E+F+ +  +++ +  L +      N
Sbjct: 160 ETDREITRQQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKKMPLDILRNELSN 219

Query: 195 G-LPLDSSPVLMAQGPSEKTHCTC 217
             L L   P +  + P  + H  C
Sbjct: 220 SILSLQPEPEIPPELPPPRPHVRC 243


>gi|5803135 RAB35, member RAS oncogene family [Homo sapiens]
          Length = 201

 Score =  154 bits (389), Expect = 6e-38
 Identities = 77/170 (45%), Positives = 118/170 (69%), Gaps = 3/170 (1%)

Query: 13  NFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQVWD 72
           ++D+LFK+++IGDS VGK+ ++  F    ++ +   TIGVDF +R+++I+G+KVK+Q+WD
Sbjct: 4   DYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWD 63

Query: 73  TAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLIGNKC 132
           TAGQERFRTIT +YYR  H  I+ YD+T   +F ++  W+HEI +    +V  +L+GNK 
Sbjct: 64  TAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQ-NCDDVCRILVGNKN 122

Query: 133 DLWEKRHVLFEDACTLAEKYGLLAVLETSAKESKNIEEVFVLMAKELIAR 182
           D  E++ V  EDA   A + G + + ETSAKE+ N+EE+F  +  EL+ R
Sbjct: 123 DDPERKVVETEDAYKFAGQMG-IQLFETSAKENVNVEEMFNCIT-ELVLR 170


>gi|19923260 RAB4A, member RAS oncogene family [Homo sapiens]
          Length = 218

 Score =  154 bits (388), Expect = 7e-38
 Identities = 85/223 (38%), Positives = 134/223 (60%), Gaps = 17/223 (7%)

Query: 6   SARAADENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKK 65
           S  A  E +D+LFK ++IG++  GK+C++  F    + +   +TIGV+F  + +++ GK 
Sbjct: 2   SQTAMSETYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKY 61

Query: 66  VKMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVI 125
           VK+Q+WDTAGQERFR++T+SYYR A  A++ YD+T R T+ ++ +W+ +     + N+VI
Sbjct: 62  VKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVI 121

Query: 126 MLIGNKCDLWEKRHVLFEDACTLAEKYGLLAVLETSAKESKNIEEVFVLMAKELIAR--- 182
           +L GNK DL   R V F +A   A++  L+  LETSA   +N+EE FV  A++++ +   
Sbjct: 122 ILCGNKKDLDADREVTFLEASRFAQENELM-FLETSALTGENVEEAFVQCARKILNKIES 180

Query: 183 --------NSLHLYGESALNGLPLDSSPVLMAQGPSEKTHCTC 217
                    S   YG++AL  L    SP   AQ P+ +  C C
Sbjct: 181 GELDPERMGSGIQYGDAALRQL---RSP-RRAQAPNAQ-ECGC 218


>gi|4759000 RAB3D, member RAS oncogene family [Homo sapiens]
          Length = 219

 Score =  153 bits (386), Expect = 1e-37
 Identities = 79/211 (37%), Positives = 126/211 (59%), Gaps = 7/211 (3%)

Query: 9   AADENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKM 68
           AAD+NFDY+FK++LIG+S+VGKT  +  +    +T    +T+G+DF V+++    K++K+
Sbjct: 14  AADQNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKL 73

Query: 69  QVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLI 128
           Q+WDTAGQER+RTIT +YYR A   ++ YD+  + +F ++  W  +I+ Y   N  ++L+
Sbjct: 74  QIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQIKTYSWDNAQVILV 133

Query: 129 GNKCDLWEKRHVLFEDACTLAEKYGLLAVLETSAKESKNIEEVFVLMAKELIAR--NSLH 186
           GNKCDL ++R V  ED   LA+  G     E SAKE+ N+++VF  +   +  +   SL 
Sbjct: 134 GNKCDLEDERVVPAEDGRRLADDLG-FEFFEASAKENINVKQVFERLVDVICEKMNESLE 192

Query: 187 LYGESALNGLPLDSSPVLMAQGPSEKTHCTC 217
               S  NG      P +      + + C+C
Sbjct: 193 PSSSSGSNG----KGPAVGDAPAPQPSSCSC 219


>gi|82659107 ras-related GTP-binding protein 4b [Homo sapiens]
          Length = 213

 Score =  151 bits (382), Expect = 4e-37
 Identities = 70/169 (41%), Positives = 112/169 (66%), Gaps = 1/169 (0%)

Query: 12  ENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQVW 71
           E +D+LFK ++IG +  GK+C++  F    + +   +TIGV+F  R +++ GK VK+Q+W
Sbjct: 3   ETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIW 62

Query: 72  DTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLIGNK 131
           DTAGQERFR++T+SYYR A  A++ YD+T R T+ S+  W+ +     + N+V++L GNK
Sbjct: 63  DTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNK 122

Query: 132 CDLWEKRHVLFEDACTLAEKYGLLAVLETSAKESKNIEEVFVLMAKELI 180
            DL  +R V F +A   A++  L+  LETSA   +N+EE F+  A+ ++
Sbjct: 123 KDLDPEREVTFLEASRFAQENELM-FLETSALTGENVEEAFLKCARTIL 170


>gi|19923750 RAB3B, member RAS oncogene family [Homo sapiens]
          Length = 219

 Score =  150 bits (379), Expect = 8e-37
 Identities = 79/213 (37%), Positives = 128/213 (60%), Gaps = 11/213 (5%)

Query: 9   AADENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKM 68
           A+D+NFDY+FK+++IG+S+VGKT  +  +    +T    +T+G+DF V+++    K+VK+
Sbjct: 14  ASDQNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKL 73

Query: 69  QVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLI 128
           Q+WDTAGQER+RTIT +YYR A   I+ YD+T   +F ++  W  +I+ Y   N  ++L+
Sbjct: 74  QIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILV 133

Query: 129 GNKCDLWEKRHVLFEDACTLAEKYGLLAVLETSAKESKNIEEVFVLMAKELIARNSLHLY 188
           GNKCD+ E+R V  E    LAE+ G     E SAKE+ ++ + F  +   +  + S  L 
Sbjct: 134 GNKCDMEEERVVPTEKGQLLAEQLG-FDFFEASAKENISVRQAFERLVDAICDKMSDSLD 192

Query: 189 GESALNG----LPLDSSPVLMAQGPSEKTHCTC 217
            + ++ G      L  +P L+ Q      +C+C
Sbjct: 193 TDPSMLGSSKNTRLSDTPPLLQQ------NCSC 219


>gi|4758996 Ras-related protein Rab-33A [Homo sapiens]
          Length = 237

 Score =  150 bits (379), Expect = 8e-37
 Identities = 85/206 (41%), Positives = 130/206 (63%), Gaps = 9/206 (4%)

Query: 17  LFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQVWDTAGQ 76
           +FKII+IGDSNVGKTC+   F  G + +  + TIGVDF  ++++I+G+K+K+QVWDTAGQ
Sbjct: 36  IFKIIVIGDSNVGKTCLTFRFCGGTFPDKTEATIGVDFREKTVEIEGEKIKVQVWDTAGQ 95

Query: 77  ERFR-TITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVV-IMLIGNKCDL 134
           ERFR ++ + YYR+ HA +  YD+T+ ++F ++  WI E   +    +V  +L+GNKCDL
Sbjct: 96  ERFRKSMVEHYYRNVHAVVFVYDVTKMTSFTNLKMWIQECNGHAVPPLVPKVLVGNKCDL 155

Query: 135 WEKRHVLFEDACTLAEKYGLLAVLETSA---KESKNIEEVFVLMAKELIARNSLHLYGES 191
            E+  V    A   A+ + +L + ETSA   KES+N+E +F+ +A  L A+ SL LY ++
Sbjct: 156 REQIQVPSNLALKFADAHNML-LFETSAKDPKESQNVESIFMCLACRLKAQKSL-LYRDA 213

Query: 192 ALNGLPLDSSPVLMAQGPSEKTHCTC 217
                 +    +   Q  + KT C C
Sbjct: 214 ERQQGKVQK--LEFPQEANSKTSCPC 237


>gi|19923985 RAB3C, member RAS oncogene family [Homo sapiens]
          Length = 227

 Score =  149 bits (377), Expect = 1e-36
 Identities = 73/209 (34%), Positives = 127/209 (60%), Gaps = 3/209 (1%)

Query: 9   AADENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKM 68
           ++D+NFDY+FK+++IG+S+VGKT  +  +    +T    +T+G+DF V+++  + K++K+
Sbjct: 22  SSDQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKL 81

Query: 69  QVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLI 128
           Q+WDTAGQER+RTIT +YYR A   I+ YD+T   +F ++  W  +I+ Y   N  ++L+
Sbjct: 82  QIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILV 141

Query: 129 GNKCDLWEKRHVLFEDACTLAEKYGLLAVLETSAKESKNIEEVFVLMAKELIARNSLHLY 188
           GNKCD+ ++R +  E    L E+ G     ETSAK++ N+++ F  +   +  + S  L 
Sbjct: 142 GNKCDMEDERVISTERGQHLGEQLG-FEFFETSAKDNINVKQTFERLVDIICDKMSESLE 200

Query: 189 GESALNGLPLDSSPVLMAQGPSEKTHCTC 217
            + A+     ++   L    P  + +C C
Sbjct: 201 TDPAITAAKQNTR--LKETPPPPQPNCAC 227


>gi|13786129 RAB33B, member RAS oncogene family [Homo sapiens]
          Length = 229

 Score =  148 bits (373), Expect = 4e-36
 Identities = 80/191 (41%), Positives = 125/191 (65%), Gaps = 7/191 (3%)

Query: 17  LFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQVWDTAGQ 76
           +FKII+IGDSNVGKTC+   F +G + +  + TIGVDF  R+++IDG+++K+Q+WDTAGQ
Sbjct: 33  IFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVEIDGERIKIQLWDTAGQ 92

Query: 77  ERFR-TITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAAN-VVIMLIGNKCDL 134
           ERFR ++ Q YYR+ HA +  YD+T  ++F S+P WI E +++  AN +  +L+GNKCDL
Sbjct: 93  ERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPSWIEECKQHLLANDIPRILVGNKCDL 152

Query: 135 WEKRHVLFEDACTLAEKYGLLAVLETSAK---ESKNIEEVFVLMAKELIARNSLHLYGES 191
                V  + A   A+ +  + + ETSAK   ++ ++E +F+ +A +L +   L L  + 
Sbjct: 153 RSAIQVPTDLAQKFADTHS-MPLFETSAKNPNDNDHVEAIFMTLAHKLKSHKPLML-SQP 210

Query: 192 ALNGLPLDSSP 202
             NG+ L   P
Sbjct: 211 PDNGIILKPEP 221


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.133    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,090,754
Number of Sequences: 37866
Number of extensions: 254819
Number of successful extensions: 1120
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 194
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 713
Number of HSP's gapped (non-prelim): 250
length of query: 217
length of database: 18,247,518
effective HSP length: 98
effective length of query: 119
effective length of database: 14,536,650
effective search space: 1729861350
effective search space used: 1729861350
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.