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Search of human proteins with 239788847
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239788847 jumonji domain containing 4 isoform 1 [Homo
sapiens]
(463 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239788847 jumonji domain containing 4 isoform 1 [Homo sapiens] 975 0.0
gi|239788849 jumonji domain containing 4 isoform 2 [Homo sapiens] 924 0.0
gi|125988395 jumonji domain containing 6 isoform 1 [Homo sapiens] 89 8e-18
gi|125988389 jumonji domain containing 6 isoform 2 [Homo sapiens] 89 8e-18
gi|56090146 jumonji domain containing 8 [Homo sapiens] 55 2e-07
gi|223942018 jumonji domain containing 5 isoform 1 [Homo sapiens] 50 6e-06
gi|223942014 jumonji domain containing 5 isoform 2 [Homo sapiens] 50 6e-06
gi|21314714 Hspb associated protein 1 [Homo sapiens] 45 1e-04
gi|167860114 jumonji domain containing 7 [Homo sapiens] 43 5e-04
gi|90093355 jumonji C domain containing histone demethylase 1 ho... 40 0.003
gi|38372909 jumonji domain containing 1B [Homo sapiens] 37 0.029
gi|148596936 hypoxia-inducible factor 1, alpha subunit inhibitor... 37 0.049
gi|226442779 jumonji domain containing 1A [Homo sapiens] 36 0.065
gi|20357522 jumonji domain containing 1A [Homo sapiens] 36 0.065
gi|54112382 F-box and leucine-rich repeat protein 10 isoform a [... 34 0.25
gi|54112380 F-box and leucine-rich repeat protein 10 isoform b [... 34 0.25
gi|16306580 F-box and leucine-rich repeat protein 11 [Homo sapiens] 34 0.32
gi|4826914 JMJD7-PLA2G4B protein [Homo sapiens] 34 0.32
gi|118600981 jumonji domain containing 1C isoform a [Homo sapiens] 32 0.93
gi|68342036 jumonji domain containing 1C isoform b [Homo sapiens] 32 0.93
gi|89242134 hypothetical protein LOC129450 [Homo sapiens] 32 1.2
gi|22547204 hairless protein isoform a [Homo sapiens] 31 2.7
gi|106879206 chromosome 14 open reading frame 169 [Homo sapiens] 31 2.7
gi|222352183 neural precursor cell expressed, developmentally do... 30 4.6
gi|21361472 neural precursor cell expressed, developmentally dow... 30 4.6
gi|222352094 neural precursor cell expressed, developmentally do... 30 4.6
gi|222352092 neural precursor cell expressed, developmentally do... 30 4.6
gi|222352090 neural precursor cell expressed, developmentally do... 30 4.6
gi|222352088 neural precursor cell expressed, developmentally do... 30 4.6
gi|222352086 neural precursor cell expressed, developmentally do... 30 4.6
>gi|239788847 jumonji domain containing 4 isoform 1 [Homo sapiens]
Length = 463
Score = 975 bits (2520), Expect = 0.0
Identities = 463/463 (100%), Positives = 463/463 (100%)
Query: 1 MRAGPEPQALAGQKRGALRLLVPRLVLTVSAPAEVRRRVLRPVLSWMDRETRALADSHFR 60
MRAGPEPQALAGQKRGALRLLVPRLVLTVSAPAEVRRRVLRPVLSWMDRETRALADSHFR
Sbjct: 1 MRAGPEPQALAGQKRGALRLLVPRLVLTVSAPAEVRRRVLRPVLSWMDRETRALADSHFR 60
Query: 61 GLGVDVPGVGQAPGRVAFVSEPGAFSYADFVRGFLLPNLPCVFSSAFTQGWGSRRRWVTP 120
GLGVDVPGVGQAPGRVAFVSEPGAFSYADFVRGFLLPNLPCVFSSAFTQGWGSRRRWVTP
Sbjct: 61 GLGVDVPGVGQAPGRVAFVSEPGAFSYADFVRGFLLPNLPCVFSSAFTQGWGSRRRWVTP 120
Query: 121 AGRPDFDHLLRTYGDVVVPVANCGVQEYNSNPKEHMTLRDYITYWKEYIQAGYSSPRGCL 180
AGRPDFDHLLRTYGDVVVPVANCGVQEYNSNPKEHMTLRDYITYWKEYIQAGYSSPRGCL
Sbjct: 121 AGRPDFDHLLRTYGDVVVPVANCGVQEYNSNPKEHMTLRDYITYWKEYIQAGYSSPRGCL 180
Query: 181 YLKDWHLCRDFPVEDVFTLPVYFSSDWLNEFWDALDVDDYRFVYAGPAGSWSPFHADIFR 240
YLKDWHLCRDFPVEDVFTLPVYFSSDWLNEFWDALDVDDYRFVYAGPAGSWSPFHADIFR
Sbjct: 181 YLKDWHLCRDFPVEDVFTLPVYFSSDWLNEFWDALDVDDYRFVYAGPAGSWSPFHADIFR 240
Query: 241 SFSWSVNVCGRKKWLLFPPGQEEALRDRHGNLPYDVTSPALCDTHLHPRNQLAGPPLEIT 300
SFSWSVNVCGRKKWLLFPPGQEEALRDRHGNLPYDVTSPALCDTHLHPRNQLAGPPLEIT
Sbjct: 241 SFSWSVNVCGRKKWLLFPPGQEEALRDRHGNLPYDVTSPALCDTHLHPRNQLAGPPLEIT 300
Query: 301 QEAGEMVFVPSGWHHQVHNLDDTISINHNWVNGFNLANMWRFLQQELCAVQEEVSEWRDS 360
QEAGEMVFVPSGWHHQVHNLDDTISINHNWVNGFNLANMWRFLQQELCAVQEEVSEWRDS
Sbjct: 301 QEAGEMVFVPSGWHHQVHNLDDTISINHNWVNGFNLANMWRFLQQELCAVQEEVSEWRDS 360
Query: 361 MPDWHHHCQVIMRSCSGINFEEFYHFLKVIAEKRLLVLREAAAEDGAGLGFEQAAFDVGR 420
MPDWHHHCQVIMRSCSGINFEEFYHFLKVIAEKRLLVLREAAAEDGAGLGFEQAAFDVGR
Sbjct: 361 MPDWHHHCQVIMRSCSGINFEEFYHFLKVIAEKRLLVLREAAAEDGAGLGFEQAAFDVGR 420
Query: 421 ITEVLASLVAHPDFQRVDTSAFSPQPKELLQQLREAVDAAAAP 463
ITEVLASLVAHPDFQRVDTSAFSPQPKELLQQLREAVDAAAAP
Sbjct: 421 ITEVLASLVAHPDFQRVDTSAFSPQPKELLQQLREAVDAAAAP 463
>gi|239788849 jumonji domain containing 4 isoform 2 [Homo sapiens]
Length = 447
Score = 924 bits (2387), Expect = 0.0
Identities = 447/463 (96%), Positives = 447/463 (96%), Gaps = 16/463 (3%)
Query: 1 MRAGPEPQALAGQKRGALRLLVPRLVLTVSAPAEVRRRVLRPVLSWMDRETRALADSHFR 60
MRAGPEPQALAGQKRGALRLLVPRLVLTVSAPAEVRRRVLRPVLSWMDRETRALADSHFR
Sbjct: 1 MRAGPEPQALAGQKRGALRLLVPRLVLTVSAPAEVRRRVLRPVLSWMDRETRALADSHFR 60
Query: 61 GLGVDVPGVGQAPGRVAFVSEPGAFSYADFVRGFLLPNLPCVFSSAFTQGWGSRRRWVTP 120
GLGVDVPGVGQAPGRVAFVSEPGAFSYADFVRGFLLPNLPCVFSSAFTQGWGSRRRWVTP
Sbjct: 61 GLGVDVPGVGQAPGRVAFVSEPGAFSYADFVRGFLLPNLPCVFSSAFTQGWGSRRRWVTP 120
Query: 121 AGRPDFDHLLRTYGDVVVPVANCGVQEYNSNPKEHMTLRDYITYWKEYIQAGYSSPRGCL 180
AGRPDFDHLLRTYGDVVVPVANCGVQEYNSNPKEHMTLRDYITYWKEYIQAGYSSPRGCL
Sbjct: 121 AGRPDFDHLLRTYGDVVVPVANCGVQEYNSNPKEHMTLRDYITYWKEYIQAGYSSPRGCL 180
Query: 181 YLKDWHLCRDFPVEDVFTLPVYFSSDWLNEFWDALDVDDYRFVYAGPAGSWSPFHADIFR 240
YLKDWHLCRDFPVEDVFTLPVYFSSDWLNEFWDALDVDDYRFVYAGPAGSWSPFHADIFR
Sbjct: 181 YLKDWHLCRDFPVEDVFTLPVYFSSDWLNEFWDALDVDDYRFVYAGPAGSWSPFHADIFR 240
Query: 241 SFSWSVNVCGRKKWLLFPPGQEEALRDRHGNLPYDVTSPALCDTHLHPRNQLAGPPLEIT 300
SFSWSVNVCGRKKWLLFPPGQEEALRDRHGNLPYDVTSPALCDTHLHPRNQLAGPPLEIT
Sbjct: 241 SFSWSVNVCGRKKWLLFPPGQEEALRDRHGNLPYDVTSPALCDTHLHPRNQLAGPPLEIT 300
Query: 301 QEAGEMVFVPSGWHHQVHNLDDTISINHNWVNGFNLANMWRFLQQELCAVQEEVSEWRDS 360
QEAGEMVFVPSGWHHQVHNLDDTISINHNWVNGFNLANMWRFLQQELCAVQEE
Sbjct: 301 QEAGEMVFVPSGWHHQVHNLDDTISINHNWVNGFNLANMWRFLQQELCAVQEE------- 353
Query: 361 MPDWHHHCQVIMRSCSGINFEEFYHFLKVIAEKRLLVLREAAAEDGAGLGFEQAAFDVGR 420
VIMRSCSGINFEEFYHFLKVIAEKRLLVLREAAAEDGAGLGFEQAAFDVGR
Sbjct: 354 ---------VIMRSCSGINFEEFYHFLKVIAEKRLLVLREAAAEDGAGLGFEQAAFDVGR 404
Query: 421 ITEVLASLVAHPDFQRVDTSAFSPQPKELLQQLREAVDAAAAP 463
ITEVLASLVAHPDFQRVDTSAFSPQPKELLQQLREAVDAAAAP
Sbjct: 405 ITEVLASLVAHPDFQRVDTSAFSPQPKELLQQLREAVDAAAAP 447
>gi|125988395 jumonji domain containing 6 isoform 1 [Homo sapiens]
Length = 414
Score = 89.0 bits (219), Expect = 8e-18
Identities = 82/268 (30%), Positives = 117/268 (43%), Gaps = 37/268 (13%)
Query: 86 SYADFVRGFLLPNLPCVFSSAFTQGWGSRRRWVTPAGRPDFDHLLRTYGDVVVPVANCGV 145
S +FV + P P V +A +GW ++ +W + L R Y + CG
Sbjct: 55 SVEEFVERYERPYKPVVLLNA-QEGWSAQEKWT-------LERLKRKYRNQKF---KCG- 102
Query: 146 QEYNSNPKEHMTLRDYITYWKEYIQAGYSSPRGCLYLKDW----HLCRDFPVEDVFTLPV 201
E N M ++ YI Y + SP LY+ D H R +ED + +P
Sbjct: 103 -EDNDGYSVKMKMKYYIEYMESTRD---DSP---LYIFDSSYGEHPKRRKLLED-YKVPK 154
Query: 202 YFSSDWLNEFWDALDVDDYRFVYAGPAGSWSPFHADIFRSFSWSVNVCGRKKWLLFPPGQ 261
+F+ D L ++ YR+ GP S + H D + +W+ V G K+W LFP
Sbjct: 155 FFTDD-LFQYAGEKRRPPYRWFVMGPPRSGTGIHIDPLGTSAWNALVQGHKRWCLFPTST 213
Query: 262 EEAL----RDRHGNLPYDVTSPALCDTHLHPRNQLAG-----PPLEITQEAGEMVFVPSG 312
L RD GN + + ++PR QL PLEI Q+ GE VFVP G
Sbjct: 214 PRELIKVTRDEGGNQQDEAIT---WFNVIYPRTQLPTWPPEFKPLEILQKPGETVFVPGG 270
Query: 313 WHHQVHNLDDTISINHNWVNGFNLANMW 340
W H V NLD TI+I N+ + N +W
Sbjct: 271 WWHVVLNLDTTIAITQNFASSTNFPVVW 298
>gi|125988389 jumonji domain containing 6 isoform 2 [Homo sapiens]
Length = 403
Score = 89.0 bits (219), Expect = 8e-18
Identities = 82/268 (30%), Positives = 117/268 (43%), Gaps = 37/268 (13%)
Query: 86 SYADFVRGFLLPNLPCVFSSAFTQGWGSRRRWVTPAGRPDFDHLLRTYGDVVVPVANCGV 145
S +FV + P P V +A +GW ++ +W + L R Y + CG
Sbjct: 55 SVEEFVERYERPYKPVVLLNA-QEGWSAQEKWT-------LERLKRKYRNQKF---KCG- 102
Query: 146 QEYNSNPKEHMTLRDYITYWKEYIQAGYSSPRGCLYLKDW----HLCRDFPVEDVFTLPV 201
E N M ++ YI Y + SP LY+ D H R +ED + +P
Sbjct: 103 -EDNDGYSVKMKMKYYIEYMESTRD---DSP---LYIFDSSYGEHPKRRKLLED-YKVPK 154
Query: 202 YFSSDWLNEFWDALDVDDYRFVYAGPAGSWSPFHADIFRSFSWSVNVCGRKKWLLFPPGQ 261
+F+ D L ++ YR+ GP S + H D + +W+ V G K+W LFP
Sbjct: 155 FFTDD-LFQYAGEKRRPPYRWFVMGPPRSGTGIHIDPLGTSAWNALVQGHKRWCLFPTST 213
Query: 262 EEAL----RDRHGNLPYDVTSPALCDTHLHPRNQLAG-----PPLEITQEAGEMVFVPSG 312
L RD GN + + ++PR QL PLEI Q+ GE VFVP G
Sbjct: 214 PRELIKVTRDEGGNQQDEAIT---WFNVIYPRTQLPTWPPEFKPLEILQKPGETVFVPGG 270
Query: 313 WHHQVHNLDDTISINHNWVNGFNLANMW 340
W H V NLD TI+I N+ + N +W
Sbjct: 271 WWHVVLNLDTTIAITQNFASSTNFPVVW 298
>gi|56090146 jumonji domain containing 8 [Homo sapiens]
Length = 285
Score = 54.7 bits (130), Expect = 2e-07
Identities = 40/108 (37%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
Query: 220 YRFVYAGPAGSWSPFHADIFRSFSWSVNVCGRKKWLLFPPGQEEALRDRHGNLPYDVTSP 279
Y F AG AGS PFH + +S + GRK+W L+PP E + H P T
Sbjct: 186 YSFGIAG-AGSGVPFH---WHGPGYSEVIYGRKRWFLYPP---EKTPEFH---PNKTTLA 235
Query: 280 ALCDTHLHPRNQLAGPPLEITQEAGEMVFVPSGWHHQVHNLDDTISIN 327
L DT+ P + PLE T AGE+++ P W H NLD ++ I+
Sbjct: 236 WLRDTY--PALPPSARPLECTIRAGEVLYFPDRWWHATLNLDTSVFIS 281
>gi|223942018 jumonji domain containing 5 isoform 1 [Homo sapiens]
Length = 454
Score = 49.7 bits (117), Expect = 6e-06
Identities = 63/251 (25%), Positives = 98/251 (39%), Gaps = 32/251 (12%)
Query: 86 SYADFVRGFLLPNLPCVFSSAFTQGWGSRRRWVTPAGRPDFDHLLRTYGDVVVPVANCGV 145
S F FL+P P + W ++W +++ G VPV
Sbjct: 229 SLQHFREQFLVPGRPVILKGV-ADHWPCMQKW-------SLEYIQEIAGCRTVPVEVGSR 280
Query: 146 QEYNSNPKEHMTLRDYITYWKEYIQAGYSSPRGCLYLKDWHLCRDFP-VEDVFTLPVYFS 204
+ MT+ ++I+ +YI + PR YL L P ++ ++P Y S
Sbjct: 281 YTDEEWSQTLMTVNEFIS---KYI---VNEPRDVGYLAQHQLFDQIPELKQDISIPDYCS 334
Query: 205 SDWLNEFWDALDVDDYRFVYAGPAGSWSPFHADIFRSFSWSVNVCGRKKWLLFPPGQEEA 264
D + + + GP G+ SP H D ++F V V GRK L+ P + A
Sbjct: 335 ------LGDGEEEEITINAWFGPQGTISPLHQDPQQNFL--VQVMGRKYIRLYSPQESGA 386
Query: 265 LRDR-----HGNLPYDVTSPALCDTHLHPRNQLAGPPLEITQEAGEMVFVPSGWHHQVHN 319
L H DV +P D P+ A P L GE++F+P + H V
Sbjct: 387 LYPHDTHLLHNTSQVDVENP---DLEKFPKFAKA-PFLSCILSPGEILFIPVKYWHYVRA 442
Query: 320 LDDTISINHNW 330
LD + S++ W
Sbjct: 443 LDLSFSVSFWW 453
>gi|223942014 jumonji domain containing 5 isoform 2 [Homo sapiens]
Length = 416
Score = 49.7 bits (117), Expect = 6e-06
Identities = 63/251 (25%), Positives = 98/251 (39%), Gaps = 32/251 (12%)
Query: 86 SYADFVRGFLLPNLPCVFSSAFTQGWGSRRRWVTPAGRPDFDHLLRTYGDVVVPVANCGV 145
S F FL+P P + W ++W +++ G VPV
Sbjct: 191 SLQHFREQFLVPGRPVILKGV-ADHWPCMQKW-------SLEYIQEIAGCRTVPVEVGSR 242
Query: 146 QEYNSNPKEHMTLRDYITYWKEYIQAGYSSPRGCLYLKDWHLCRDFP-VEDVFTLPVYFS 204
+ MT+ ++I+ +YI + PR YL L P ++ ++P Y S
Sbjct: 243 YTDEEWSQTLMTVNEFIS---KYI---VNEPRDVGYLAQHQLFDQIPELKQDISIPDYCS 296
Query: 205 SDWLNEFWDALDVDDYRFVYAGPAGSWSPFHADIFRSFSWSVNVCGRKKWLLFPPGQEEA 264
D + + + GP G+ SP H D ++F V V GRK L+ P + A
Sbjct: 297 ------LGDGEEEEITINAWFGPQGTISPLHQDPQQNFL--VQVMGRKYIRLYSPQESGA 348
Query: 265 LRDR-----HGNLPYDVTSPALCDTHLHPRNQLAGPPLEITQEAGEMVFVPSGWHHQVHN 319
L H DV +P D P+ A P L GE++F+P + H V
Sbjct: 349 LYPHDTHLLHNTSQVDVENP---DLEKFPKFAKA-PFLSCILSPGEILFIPVKYWHYVRA 404
Query: 320 LDDTISINHNW 330
LD + S++ W
Sbjct: 405 LDLSFSVSFWW 415
>gi|21314714 Hspb associated protein 1 [Homo sapiens]
Length = 488
Score = 45.1 bits (105), Expect = 1e-04
Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 24/122 (19%)
Query: 223 VYAGPAGSWSPFHADIFRSFSWSVNVCGRKKWLLFPPGQEEALRDRHGNLPYDVTSPALC 282
++ G G+ +P H D + + V GRK+W LFPP L +PY+ +S
Sbjct: 163 LWIGSLGAHTPCHLDSY-GCNLVFQVQGRKRWHLFPPEDTPFLYPTR--IPYEESS---- 215
Query: 283 DTHLHPRNQLAGPPLE------------ITQEAGEMVFVPSGWHHQVHNLDD-TISINHN 329
+ + + P L+ +T G+++FVP W H V ++D T+SIN +
Sbjct: 216 ---VFSKINVVNPDLKRFPQFRKAQRHAVTLSPGQVLFVPRHWWHYVESIDPVTVSIN-S 271
Query: 330 WV 331
W+
Sbjct: 272 WI 273
>gi|167860114 jumonji domain containing 7 [Homo sapiens]
Length = 316
Score = 43.1 bits (100), Expect = 5e-04
Identities = 62/271 (22%), Positives = 104/271 (38%), Gaps = 55/271 (20%)
Query: 90 FVRGFLLPNLPCVFSSAFTQGWGSRRRWVTPAGRPDFDHLLRTYGDVVVPVANCGVQEYN 149
F R ++ PN PC+ +A Q W + ++W P R +V V V G +
Sbjct: 41 FYRDWVCPNRPCIIRNAL-QHWPALQKWSLPYFRATVGST-----EVSVAVTPDGYADAV 94
Query: 150 SNPKEHMTL--RDYITYWKEYIQAGYSSPRGCLYLKDWHLCRDFPVEDVFTLP-----VY 202
+ M R +++ + ++ P G LY++ C + P E LP V
Sbjct: 95 RGDRFMMPAERRLPLSFVLDVLEGRAQHP-GVLYVQKQ--CSNLPSELPQLLPDLESHVP 151
Query: 203 FSSDWLNEFWDALDVDDYRFVYAGPAGSWSPFHADIFRSFSWSVNVCGRKKWLLFPPGQ- 261
++S+ L + DA++ + G A + + H D + + V+ G K +L PP
Sbjct: 152 WASEALGKMPDAVNF------WLGEAAAVTSLHKDHYENLYCVVS--GEKHFLFHPPSDR 203
Query: 262 -------------------------EEALRDRHGNLPYDVTSPALCDTHLHPRNQLAGPP 296
EEA+ +P+ P D +P A
Sbjct: 204 PFIPYELYTPATYQLTEEGTFKVVDEEAME----KVPWIPLDPLAPDLARYPSYSQA-QA 258
Query: 297 LEITQEAGEMVFVPSGWHHQVHNLDDTISIN 327
L T AGEM+++P+ W H V I++N
Sbjct: 259 LRCTVRAGEMLYLPALWFHHVQQSQGCIAVN 289
>gi|90093355 jumonji C domain containing histone demethylase 1
homolog D [Homo sapiens]
Length = 941
Score = 40.4 bits (93), Expect = 0.003
Identities = 32/144 (22%), Positives = 58/144 (40%), Gaps = 12/144 (8%)
Query: 207 WLNEFWDALDVDDYRFVYA----GPAGSWSPFHADIFRSFSWSVNVCGRKKWLLFPPGQE 262
W+ +W V FV G S++ FH D + W + G K + L P E
Sbjct: 250 WVENYWPDDSVFPKPFVQKYCLMGVQDSYTDFHIDFGGTSVWYHVLWGEKIFYLIKPTDE 309
Query: 263 EALRDRHGNLPYDVTSPALCDTHLHPRNQLAGPPLEITQEAGEMVFVPSGWHHQVHNLDD 322
R Y+ S ++ + + +++ + + G +FVP+GW H V D
Sbjct: 310 NLAR-------YESWSSSVTQSEVFFGDKV-DKCYKCVVKQGHTLFVPTGWIHAVLTSQD 361
Query: 323 TISINHNWVNGFNLANMWRFLQQE 346
++ N+++ N+ R + E
Sbjct: 362 CMAFGGNFLHNLNIGMQLRCYEME 385
>gi|38372909 jumonji domain containing 1B [Homo sapiens]
Length = 1761
Score = 37.4 bits (85), Expect = 0.029
Identities = 17/47 (36%), Positives = 29/47 (61%)
Query: 299 ITQEAGEMVFVPSGWHHQVHNLDDTISINHNWVNGFNLANMWRFLQQ 345
I Q G+ VF+P+G HQVHNL I + ++V+ ++ + +R Q+
Sbjct: 1673 IVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFRLTQE 1719
>gi|148596936 hypoxia-inducible factor 1, alpha subunit inhibitor
[Homo sapiens]
Length = 349
Score = 36.6 bits (83), Expect = 0.049
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 16/141 (11%)
Query: 203 FSSDWLNEF-----WDALDVDDYRFVYAGPAGSWSPFHADIFRSFSWSVNVCGRKKWLLF 257
F+ +W+N+ W L + + G G+ +P H D ++F + G K+ +LF
Sbjct: 165 FNWNWINKQQGKRGWGQLTSN---LLLIGMEGNVTPAHYDEQQNFFAQIK--GYKRCILF 219
Query: 258 PPGQEEALRDRHGNLPYDVTSPALCDTHLHPR--NQLAGPPLEITQEAGEMVFVPSGWHH 315
PP Q E L + P D S D + R N E G+++++P W H
Sbjct: 220 PPDQFECLYPYPVHHPCDRQSQVDFDNPDYERFPNFQNVVGYETVVGPGDVLYIPMYWWH 279
Query: 316 QVHNLDD---TISINHNWVNG 333
+ +L + TI++N W G
Sbjct: 280 HIESLLNGGITITVNF-WYKG 299
>gi|226442779 jumonji domain containing 1A [Homo sapiens]
Length = 1321
Score = 36.2 bits (82), Expect = 0.065
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 6/53 (11%)
Query: 299 ITQEAGEMVFVPSGWHHQVHNLDDTISINHNWVNG------FNLANMWRFLQQ 345
I Q G++VF+P+G HQVHNL I + ++V+ F L +R+L Q
Sbjct: 1233 IVQFLGDVVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFWLTQEFRYLSQ 1285
>gi|20357522 jumonji domain containing 1A [Homo sapiens]
Length = 1321
Score = 36.2 bits (82), Expect = 0.065
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 6/53 (11%)
Query: 299 ITQEAGEMVFVPSGWHHQVHNLDDTISINHNWVNG------FNLANMWRFLQQ 345
I Q G++VF+P+G HQVHNL I + ++V+ F L +R+L Q
Sbjct: 1233 IVQFLGDVVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFWLTQEFRYLSQ 1285
>gi|54112382 F-box and leucine-rich repeat protein 10 isoform a
[Homo sapiens]
Length = 1336
Score = 34.3 bits (77), Expect = 0.25
Identities = 32/120 (26%), Positives = 47/120 (39%), Gaps = 12/120 (10%)
Query: 229 GSWSPFHADIFRSFSWSVNVCGRKKWLLFPPGQEEALRDRHGNLPYD--VTSPALCDTHL 286
G ++ FH D + W G K + L PP H Y+ V S D L
Sbjct: 236 GCFTDFHIDFGGTSVWYHVFRGGKIFWLIPP-------TLHNLALYEEWVLSGKQSDIFL 288
Query: 287 HPRNQLAGPPLEITQEAGEMVFVPSGWHHQVHNLDDTISINHNWVNGFNLANMWRFLQQE 346
R + I + G F+PSGW H V+ D++ N ++ FN+ R + E
Sbjct: 289 GDRVERCQ---RIELKQGYTFFIPSGWIHAVYTPVDSLVFGGNILHSFNVPMQLRIYEIE 345
>gi|54112380 F-box and leucine-rich repeat protein 10 isoform b
[Homo sapiens]
Length = 1265
Score = 34.3 bits (77), Expect = 0.25
Identities = 32/120 (26%), Positives = 47/120 (39%), Gaps = 12/120 (10%)
Query: 229 GSWSPFHADIFRSFSWSVNVCGRKKWLLFPPGQEEALRDRHGNLPYD--VTSPALCDTHL 286
G ++ FH D + W G K + L PP H Y+ V S D L
Sbjct: 205 GCFTDFHIDFGGTSVWYHVFRGGKIFWLIPP-------TLHNLALYEEWVLSGKQSDIFL 257
Query: 287 HPRNQLAGPPLEITQEAGEMVFVPSGWHHQVHNLDDTISINHNWVNGFNLANMWRFLQQE 346
R + I + G F+PSGW H V+ D++ N ++ FN+ R + E
Sbjct: 258 GDRVERCQ---RIELKQGYTFFIPSGWIHAVYTPVDSLVFGGNILHSFNVPMQLRIYEIE 314
>gi|16306580 F-box and leucine-rich repeat protein 11 [Homo sapiens]
Length = 1162
Score = 33.9 bits (76), Expect = 0.32
Identities = 27/109 (24%), Positives = 44/109 (40%), Gaps = 10/109 (9%)
Query: 229 GSWSPFHADIFRSFSW-SVNVCGRKKWLLFPPGQEEALRDRHGNLPYDVTSPALCDTHLH 287
G ++ FH D + W ++ G+ WL+ P L + + S D L
Sbjct: 206 GCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHNLELYENW------LLSGKQGDIFLG 259
Query: 288 PRNQLAGPPLEITQEAGEMVFVPSGWHHQVHNLDDTISINHNWVNGFNL 336
R I + G +PSGW H V+ DT+ N+++ FN+
Sbjct: 260 DR---VSDCQRIELKQGYTFVIPSGWIHAVYTPTDTLVFGGNFLHSFNI 305
>gi|4826914 JMJD7-PLA2G4B protein [Homo sapiens]
Length = 1012
Score = 33.9 bits (76), Expect = 0.32
Identities = 46/198 (23%), Positives = 82/198 (41%), Gaps = 31/198 (15%)
Query: 90 FVRGFLLPNLPCVFSSAFTQGWGSRRRWVTPAGRPDFDHLLRTYGDVVVPVANCGVQEYN 149
F R ++ PN PC+ +A Q W + ++W P R +V V V G +
Sbjct: 41 FYRDWVCPNRPCIIRNAL-QHWPALQKWSLPYFRATVGST-----EVSVAVTPDGYADAV 94
Query: 150 SNPKEHMTL--RDYITYWKEYIQAGYSSPRGCLYLKDWHLCRDFPVEDVFTLP-----VY 202
+ M R +++ + ++ P G LY++ C + P E LP V
Sbjct: 95 RGDRFMMPAERRLPLSFVLDVLEGRAQHP-GVLYVQ--KQCSNLPSELPQLLPDLESHVP 151
Query: 203 FSSDWLNEFWDALDVDDYRFVYAGPAGSWSPFHADIFRSFSWSVNVCGRKKWLLFPPGQE 262
++S+ L + DA++ + G A + + H D + + V+ G K +L PP
Sbjct: 152 WASEALGKMPDAVN------FWLGEAAAVTSLHKDHYENLYCVVS--GEKHFLFHPPSDR 203
Query: 263 EALRDRHGNLPYDVTSPA 280
+PY++ +PA
Sbjct: 204 PF-------IPYELYTPA 214
>gi|118600981 jumonji domain containing 1C isoform a [Homo sapiens]
Length = 2540
Score = 32.3 bits (72), Expect = 0.93
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 299 ITQEAGEMVFVPSGWHHQVHNLDDTISINHNWVNGFNLANMWRFLQQELCAVQEEVS 355
+ Q G+ + +P+G HQV N I + ++V+ +L + L QEL ++EE++
Sbjct: 2450 LIQFLGDAIVLPAGALHQVQNFHSCIQVTEDFVSPEHLVESFH-LTQELRLLKEEIN 2505
>gi|68342036 jumonji domain containing 1C isoform b [Homo sapiens]
Length = 2303
Score = 32.3 bits (72), Expect = 0.93
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 299 ITQEAGEMVFVPSGWHHQVHNLDDTISINHNWVNGFNLANMWRFLQQELCAVQEEVS 355
+ Q G+ + +P+G HQV N I + ++V+ +L + L QEL ++EE++
Sbjct: 2213 LIQFLGDAIVLPAGALHQVQNFHSCIQVTEDFVSPEHLVESFH-LTQELRLLKEEIN 2268
>gi|89242134 hypothetical protein LOC129450 [Homo sapiens]
Length = 315
Score = 32.0 bits (71), Expect = 1.2
Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Query: 246 VNVCGRKKWLLFPPGQEEALRDRHGNLPY-DVTSPALCDTHLHPRNQLAGPPLEITQEAG 304
+ V G+K+ +LF P + L + ++ +P L L + + E + EAG
Sbjct: 169 IQVTGKKRVVLFSPRDAQYLYLKGTKSEVLNIDNPDLAKYPLFSKARR----YECSLEAG 224
Query: 305 EMVFVPSGWHHQVHNLDDTISINHNW 330
+++F+P+ W H V + + + +N W
Sbjct: 225 DVLFIPALWFHNVISEEFGVGVNIFW 250
>gi|22547204 hairless protein isoform a [Homo sapiens]
Length = 1189
Score = 30.8 bits (68), Expect = 2.7
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 299 ITQEAGEMVFVPSGWHHQVHNLDDTISINHNWVN 332
+ Q GE V VP+G HQV L T+S+ ++++
Sbjct: 1109 LLQAPGEAVLVPAGAPHQVQGLVSTVSVTQHFLS 1142
>gi|106879206 chromosome 14 open reading frame 169 [Homo sapiens]
Length = 641
Score = 30.8 bits (68), Expect = 2.7
Identities = 36/146 (24%), Positives = 63/146 (43%), Gaps = 23/146 (15%)
Query: 223 VYAGPAGS--WSPFHADIFRSFSWSVNVCGRKKWLLFPPGQEEALRDRHGNLPYDVTSPA 280
VY P S ++P + DI ++ + + GRK W ++ P +P + A
Sbjct: 327 VYLTPPNSQGFAPHYDDIE---AFVLQLEGRKLWRVYRP-----------RVPTEEL--A 370
Query: 281 LCDTHLHPRNQLAGPPLEITQEAGEMVFVPSGWHHQVHNLDDTISINHNWVNGFNLANMW 340
L + ++ L P L+ E G++++ P G+ HQ D S+ H ++ +
Sbjct: 371 LTSSPNFSQDDLGEPVLQTVLEPGDLLYFPRGFIHQAECQDGVHSL-HLTLSTYQRNTWG 429
Query: 341 RFLQQEL----CAVQEEVSEWRDSMP 362
FL+ L A EE E+R +P
Sbjct: 430 DFLEAILPLAVQAAMEENVEFRRGLP 455
>gi|222352183 neural precursor cell expressed, developmentally
down-regulated 4-like isoform 2 [Homo sapiens]
Length = 854
Score = 30.0 bits (66), Expect = 4.6
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 12/70 (17%)
Query: 260 GQEEALRDRHGNLPYDVTSPALCDTHLHPRNQLAGPPLEITQEAGEMVFVPSGWHHQVHN 319
GQ+E D+ ++ + D+ + +L PPL P GW +V N
Sbjct: 37 GQDEENSDQRDDMEHGWEVVDSNDSASQHQEELPPPPL------------PPGWEEKVDN 84
Query: 320 LDDTISINHN 329
L T +NHN
Sbjct: 85 LGRTYYVNHN 94
>gi|21361472 neural precursor cell expressed, developmentally
down-regulated 4-like isoform 3 [Homo sapiens]
Length = 955
Score = 30.0 bits (66), Expect = 4.6
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 12/70 (17%)
Query: 260 GQEEALRDRHGNLPYDVTSPALCDTHLHPRNQLAGPPLEITQEAGEMVFVPSGWHHQVHN 319
GQ+E D+ ++ + D+ + +L PPL P GW +V N
Sbjct: 158 GQDEENSDQRDDMEHGWEVVDSNDSASQHQEELPPPPL------------PPGWEEKVDN 205
Query: 320 LDDTISINHN 329
L T +NHN
Sbjct: 206 LGRTYYVNHN 215
>gi|222352094 neural precursor cell expressed, developmentally
down-regulated 4-like isoform 6 [Homo sapiens]
Length = 834
Score = 30.0 bits (66), Expect = 4.6
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 12/70 (17%)
Query: 260 GQEEALRDRHGNLPYDVTSPALCDTHLHPRNQLAGPPLEITQEAGEMVFVPSGWHHQVHN 319
GQ+E D+ ++ + D+ + +L PPL P GW +V N
Sbjct: 37 GQDEENSDQRDDMEHGWEVVDSNDSASQHQEELPPPPL------------PPGWEEKVDN 84
Query: 320 LDDTISINHN 329
L T +NHN
Sbjct: 85 LGRTYYVNHN 94
>gi|222352092 neural precursor cell expressed, developmentally
down-regulated 4-like isoform 6 [Homo sapiens]
Length = 834
Score = 30.0 bits (66), Expect = 4.6
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 12/70 (17%)
Query: 260 GQEEALRDRHGNLPYDVTSPALCDTHLHPRNQLAGPPLEITQEAGEMVFVPSGWHHQVHN 319
GQ+E D+ ++ + D+ + +L PPL P GW +V N
Sbjct: 37 GQDEENSDQRDDMEHGWEVVDSNDSASQHQEELPPPPL------------PPGWEEKVDN 84
Query: 320 LDDTISINHN 329
L T +NHN
Sbjct: 85 LGRTYYVNHN 94
>gi|222352090 neural precursor cell expressed, developmentally
down-regulated 4-like isoform 5 [Homo sapiens]
Length = 947
Score = 30.0 bits (66), Expect = 4.6
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 12/70 (17%)
Query: 260 GQEEALRDRHGNLPYDVTSPALCDTHLHPRNQLAGPPLEITQEAGEMVFVPSGWHHQVHN 319
GQ+E D+ ++ + D+ + +L PPL P GW +V N
Sbjct: 150 GQDEENSDQRDDMEHGWEVVDSNDSASQHQEELPPPPL------------PPGWEEKVDN 197
Query: 320 LDDTISINHN 329
L T +NHN
Sbjct: 198 LGRTYYVNHN 207
>gi|222352088 neural precursor cell expressed, developmentally
down-regulated 4-like isoform 4 [Homo sapiens]
Length = 967
Score = 30.0 bits (66), Expect = 4.6
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 12/70 (17%)
Query: 260 GQEEALRDRHGNLPYDVTSPALCDTHLHPRNQLAGPPLEITQEAGEMVFVPSGWHHQVHN 319
GQ+E D+ ++ + D+ + +L PPL P GW +V N
Sbjct: 150 GQDEENSDQRDDMEHGWEVVDSNDSASQHQEELPPPPL------------PPGWEEKVDN 197
Query: 320 LDDTISINHN 329
L T +NHN
Sbjct: 198 LGRTYYVNHN 207
>gi|222352086 neural precursor cell expressed, developmentally
down-regulated 4-like isoform 1 [Homo sapiens]
Length = 975
Score = 30.0 bits (66), Expect = 4.6
Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 12/70 (17%)
Query: 260 GQEEALRDRHGNLPYDVTSPALCDTHLHPRNQLAGPPLEITQEAGEMVFVPSGWHHQVHN 319
GQ+E D+ ++ + D+ + +L PPL P GW +V N
Sbjct: 158 GQDEENSDQRDDMEHGWEVVDSNDSASQHQEELPPPPL------------PPGWEEKVDN 205
Query: 320 LDDTISINHN 329
L T +NHN
Sbjct: 206 LGRTYYVNHN 215
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.138 0.455
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,488,617
Number of Sequences: 37866
Number of extensions: 1014421
Number of successful extensions: 2032
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 1983
Number of HSP's gapped (non-prelim): 58
length of query: 463
length of database: 18,247,518
effective HSP length: 106
effective length of query: 357
effective length of database: 14,233,722
effective search space: 5081438754
effective search space used: 5081438754
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.