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Search of human proteins with 239758126
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239758126 PREDICTED: similar to hCG2003752 [Homo sapiens]
(143 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239758126 PREDICTED: similar to hCG2003752 [Homo sapiens] 309 4e-85
gi|239750051 PREDICTED: hypothetical protein XP_002347266 [Homo ... 204 3e-53
gi|239755488 PREDICTED: similar to ring finger protein 18 isofor... 197 3e-51
gi|239755642 PREDICTED: similar to tripartite motif protein 39 [... 196 4e-51
gi|239750141 PREDICTED: similar to tripartite motif protein 39 [... 193 5e-50
gi|88953346 PREDICTED: Tripartite motif-containing protein 43-li... 169 6e-43
gi|20270353 tripartite motif-containing 43 [Homo sapiens] 169 6e-43
gi|210147600 tripartite motif-containing 64 [Homo sapiens] 108 2e-24
gi|239755644 PREDICTED: tripartite motif-containing 77 [Homo sap... 106 6e-24
gi|239750143 PREDICTED: tripartite motif-containing 77 [Homo sap... 106 6e-24
gi|169202375 PREDICTED: tripartite motif-containing protein 64B-... 106 6e-24
gi|239744448 PREDICTED: hypothetical protein XP_002343148 [Homo ... 106 6e-24
gi|225903455 tripartite motif-containing 77 [Homo sapiens] 106 6e-24
gi|239755486 PREDICTED: tripartite motif-containing protein 64C-... 103 5e-23
gi|239755484 PREDICTED: tripartite motif-containing protein 64C-... 103 5e-23
gi|239750044 PREDICTED: tripartite motif-containing protein 64C-... 103 5e-23
gi|239750042 PREDICTED: tripartite motif-containing protein 64C-... 103 5e-23
gi|239744355 PREDICTED: tripartite motif-containing protein 64C-... 103 5e-23
gi|239744353 PREDICTED: tripartite motif-containing protein 64C-... 103 5e-23
gi|89034201 PREDICTED: similar to ring finger protein 18 [Homo s... 101 2e-22
gi|27484954 PREDICTED: similar to ring finger protein 18 [Homo s... 101 2e-22
gi|9966829 ring finger protein 18 [Homo sapiens] 101 2e-22
gi|169202726 PREDICTED: similar to ring finger protein 18 isofor... 100 4e-22
gi|169203362 PREDICTED: similar to ring finger protein 18 [Homo ... 100 4e-22
gi|157502227 hypothetical protein LOC729384 [Homo sapiens] 97 5e-21
gi|169203039 PREDICTED: similar to ring finger protein 18 isofor... 97 5e-21
gi|239755646 PREDICTED: similar to ring finger protein 18 [Homo ... 97 5e-21
gi|169203034 PREDICTED: similar to ring finger protein 18 [Homo ... 97 5e-21
gi|89034196 PREDICTED: similar to ring finger protein 18 [Homo s... 97 5e-21
gi|209862805 SPRY domain containing 5 [Homo sapiens] 96 1e-20
>gi|239758126 PREDICTED: similar to hCG2003752 [Homo sapiens]
Length = 143
Score = 309 bits (792), Expect = 4e-85
Identities = 143/143 (100%), Positives = 143/143 (100%)
Query: 1 MPQPVNPELTTGRITGPVDRLNHFQVEISFTWEVTNYNIRLFEDARSLMLRRESLRSDRS 60
MPQPVNPELTTGRITGPVDRLNHFQVEISFTWEVTNYNIRLFEDARSLMLRRESLRSDRS
Sbjct: 1 MPQPVNPELTTGRITGPVDRLNHFQVEISFTWEVTNYNIRLFEDARSLMLRRESLRSDRS 60
Query: 61 DYFAAWGDWVFSSGKHYWELDVENSWDWALGVCYWCHLKTSSPLLSQYTERPLGQMGVFL 120
DYFAAWGDWVFSSGKHYWELDVENSWDWALGVCYWCHLKTSSPLLSQYTERPLGQMGVFL
Sbjct: 61 DYFAAWGDWVFSSGKHYWELDVENSWDWALGVCYWCHLKTSSPLLSQYTERPLGQMGVFL 120
Query: 121 DYECGMNQREVSNVTKGIRNTNF 143
DYECGMNQREVSNVTKGIRNTNF
Sbjct: 121 DYECGMNQREVSNVTKGIRNTNF 143
>gi|239750051 PREDICTED: hypothetical protein XP_002347266 [Homo
sapiens]
Length = 136
Score = 204 bits (518), Expect = 3e-53
Identities = 94/105 (89%), Positives = 99/105 (94%)
Query: 1 MPQPVNPELTTGRITGPVDRLNHFQVEISFTWEVTNYNIRLFEDARSLMLRRESLRSDRS 60
MPQPVNPELTTGRITGPVDRLNHFQVEISFTWEVTNYNIRLFEDARSLMLRRESLRSDRS
Sbjct: 12 MPQPVNPELTTGRITGPVDRLNHFQVEISFTWEVTNYNIRLFEDARSLMLRRESLRSDRS 71
Query: 61 DYFAAWGDWVFSSGKHYWELDVENSWDWALGVCYWCHLKTSSPLL 105
DYFAAWGDWVFSSGKHYWELDVENSWDWALGVC ++ +S ++
Sbjct: 72 DYFAAWGDWVFSSGKHYWELDVENSWDWALGVCKDSWIRKNSTMV 116
>gi|239755488 PREDICTED: similar to ring finger protein 18 isoform 2
[Homo sapiens]
Length = 446
Score = 197 bits (500), Expect = 3e-51
Identities = 102/162 (62%), Positives = 110/162 (67%), Gaps = 28/162 (17%)
Query: 1 MPQPVNPELTTGRITGPVDRLNHFQVEISFTWEVTNYNIRLFEDARSLMLRRESLRSDRS 60
MPQPVNPELT G ITGPVDRLNHF+VE SFTWEVTNYNIRLFED RSLM R SL SDRS
Sbjct: 262 MPQPVNPELTIGPITGPVDRLNHFRVETSFTWEVTNYNIRLFEDVRSLMFRCGSLNSDRS 321
Query: 61 DYFAAWGDWVFSSGKHYWELDVENSWDWALGVC--YWCH--------------------- 97
D FAAWG WVFSSGKHYWELDV+NSWDWALGVC W
Sbjct: 322 DNFAAWGAWVFSSGKHYWELDVDNSWDWALGVCKDSWIRKNSTMVKSKDIFLLLCVKVDN 381
Query: 98 ---LKTSSPLLSQYTERPLGQMGVFLDYECGMNQREVSNVTK 136
L T+SP+ Y E+PLG++GVFLD+E G NVTK
Sbjct: 382 HFSLLTTSPMFPDYVEKPLGRVGVFLDFESG--SVSFLNVTK 421
>gi|239755642 PREDICTED: similar to tripartite motif protein 39
[Homo sapiens]
Length = 229
Score = 196 bits (499), Expect = 4e-51
Identities = 101/162 (62%), Positives = 110/162 (67%), Gaps = 28/162 (17%)
Query: 1 MPQPVNPELTTGRITGPVDRLNHFQVEISFTWEVTNYNIRLFEDARSLMLRRESLRSDRS 60
MPQPVNPE TG ITGPVDRLNHF+VEISFTWE TNYNI LFED RSLM RR SL SDRS
Sbjct: 45 MPQPVNPEFPTGPITGPVDRLNHFRVEISFTWEGTNYNIGLFEDVRSLMFRRGSLNSDRS 104
Query: 61 DYFAAWGDWVFSSGKHYWELDVENSWDWALGVC--YWCH--------------------- 97
DYFAAWG WVFSSGKHYWELDV+NSWDWALGVC W
Sbjct: 105 DYFAAWGAWVFSSGKHYWELDVDNSWDWALGVCKDSWIRKNSTMFKSKDIFLLLCVKVDN 164
Query: 98 ---LKTSSPLLSQYTERPLGQMGVFLDYECGMNQREVSNVTK 136
L T+SP+ Y E+PLG++GVFL++E G NVTK
Sbjct: 165 HFSLLTTSPMFPHYVEKPLGRVGVFLNFESG--SVSFLNVTK 204
>gi|239750141 PREDICTED: similar to tripartite motif protein 39
[Homo sapiens]
Length = 229
Score = 193 bits (490), Expect = 5e-50
Identities = 100/162 (61%), Positives = 109/162 (67%), Gaps = 28/162 (17%)
Query: 1 MPQPVNPELTTGRITGPVDRLNHFQVEISFTWEVTNYNIRLFEDARSLMLRRESLRSDRS 60
MPQPVNPE TG ITGPVDRLNHF+VEISFTWE TNYNI LFED RSLM RR SL SDRS
Sbjct: 45 MPQPVNPEFPTGPITGPVDRLNHFRVEISFTWEGTNYNIGLFEDVRSLMFRRGSLNSDRS 104
Query: 61 DYFAAWGDWVFSSGKHYWELDVENSWDWALGVC--YWCH--------------------- 97
DYFAAWG WVFSSGKHYWELDV+NSWDWALGVC W
Sbjct: 105 DYFAAWGAWVFSSGKHYWELDVDNSWDWALGVCKDSWIRKNSTMFNSKDIFLLLCVKVDN 164
Query: 98 ---LKTSSPLLSQYTERPLGQMGVFLDYECGMNQREVSNVTK 136
L T+SP+ Y E+PL ++GVFL++E G NVTK
Sbjct: 165 HFSLLTTSPMFPHYVEKPLVRVGVFLNFESG--SVSFLNVTK 204
>gi|88953346 PREDICTED: Tripartite motif-containing protein 43-like
protein 1 [Homo sapiens]
Length = 446
Score = 169 bits (429), Expect = 6e-43
Identities = 94/162 (58%), Positives = 105/162 (64%), Gaps = 28/162 (17%)
Query: 1 MPQPVNPELTTGRITGPVDRLNHFQVEISFTWEVTNYNIRLFEDARSLMLRRESLRSDRS 60
MPQPVNPELT G ITG V RLN F+VEISF +EVTN+NIRLFED RS M RR L SDRS
Sbjct: 262 MPQPVNPELTAGPITGLVYRLNRFRVEISFHFEVTNHNIRLFEDVRSWMFRRGPLNSDRS 321
Query: 61 DYFAAWGDWVFSSGKHYWELDVENSWDWALGVC--YWC---------------------- 96
DYFAAWG VFS GKHYWELDV+NS DWALGVC W
Sbjct: 322 DYFAAWGARVFSFGKHYWELDVDNSCDWALGVCNNSWIRKNSTMVNSEDIFLLLCLKVDN 381
Query: 97 --HLKTSSPLLSQYTERPLGQMGVFLDYECGMNQREVSNVTK 136
+L T+SP+ Y E+PLG++GVFLD+E G NVTK
Sbjct: 382 HFNLLTTSPVFPHYIEKPLGRVGVFLDFESG--SVSFLNVTK 421
>gi|20270353 tripartite motif-containing 43 [Homo sapiens]
Length = 446
Score = 169 bits (429), Expect = 6e-43
Identities = 94/162 (58%), Positives = 105/162 (64%), Gaps = 28/162 (17%)
Query: 1 MPQPVNPELTTGRITGPVDRLNHFQVEISFTWEVTNYNIRLFEDARSLMLRRESLRSDRS 60
MPQPVNPELT G ITG V RLN F+VEISF +EVTN+NIRLFED RS M RR L SDRS
Sbjct: 262 MPQPVNPELTAGPITGLVYRLNRFRVEISFHFEVTNHNIRLFEDVRSWMFRRGPLNSDRS 321
Query: 61 DYFAAWGDWVFSSGKHYWELDVENSWDWALGVC--YWC---------------------- 96
DYFAAWG VFS GKHYWELDV+NS DWALGVC W
Sbjct: 322 DYFAAWGARVFSFGKHYWELDVDNSCDWALGVCNNSWIRKNSTMVNSEDIFLLLCLKVDN 381
Query: 97 --HLKTSSPLLSQYTERPLGQMGVFLDYECGMNQREVSNVTK 136
+L T+SP+ Y E+PLG++GVFLD+E G NVTK
Sbjct: 382 HFNLLTTSPVFPHYIEKPLGRVGVFLDFESG--SVSFLNVTK 421
>gi|210147600 tripartite motif-containing 64 [Homo sapiens]
Length = 449
Score = 108 bits (270), Expect = 2e-24
Identities = 64/154 (41%), Positives = 83/154 (53%), Gaps = 30/154 (19%)
Query: 2 PQPVNPELTTGRITGPVDRLNHFQVEISFTWEVTNYNIRLFEDARSLMLRRESLRSDRS- 60
PQPVNPELT+ ITG +D LN+F+V+ + + E+ I L ED R ++ + L +
Sbjct: 262 PQPVNPELTSWCITGVLDMLNNFRVDSALSTEMIPCYISLSEDVRYVIFGDDHLSAPTDP 321
Query: 61 ---DYFAAWGDWVFSSGKHYWELDVENSWDWALGVCY----------------------- 94
D FA WG F+SGKHYWE+DV S +W LGVC
Sbjct: 322 QGVDSFAVWGAQAFTSGKHYWEVDVTLSSNWILGVCQDSRTADANFVIDSDERFFLISSK 381
Query: 95 ---WCHLKTSSPLLSQYTERPLGQMGVFLDYECG 125
L T+SP L QY +RPLGQ+GVFLDY+ G
Sbjct: 382 RSNHYSLSTNSPPLIQYVQRPLGQVGVFLDYDNG 415
>gi|239755644 PREDICTED: tripartite motif-containing 77 [Homo
sapiens]
Length = 455
Score = 106 bits (265), Expect = 6e-24
Identities = 60/156 (38%), Positives = 84/156 (53%), Gaps = 30/156 (19%)
Query: 1 MPQPVNPELTTGRITGPVDRLNHFQVEISFTWEVTNYNIRLFEDARSLMLRRE----SLR 56
MPQPVNP+L+ ITG +RLN F+V I+ ++ + + LFED R L + S
Sbjct: 267 MPQPVNPQLSAWTITGVSERLNFFRVYITLDRKICSNHKLLFEDLRHLQCSLDDTDMSCN 326
Query: 57 SDRSDYFAAWGDWVFSSGKHYWELDVENSWDWALGVC--YWC------------------ 96
+ Y ++WG + SSGKHYWE+DV++S +W +G+C W
Sbjct: 327 PTSTQYTSSWGAQILSSGKHYWEVDVKDSCNWVIGLCREAWTKRNDMRLDSEGIFLLLCL 386
Query: 97 ------HLKTSSPLLSQYTERPLGQMGVFLDYECGM 126
L ++SPLL Y RP G +GVFLDYECG+
Sbjct: 387 KVDDHFSLFSTSPLLPHYIPRPQGWLGVFLDYECGI 422
>gi|239750143 PREDICTED: tripartite motif-containing 77 [Homo
sapiens]
Length = 455
Score = 106 bits (265), Expect = 6e-24
Identities = 60/156 (38%), Positives = 84/156 (53%), Gaps = 30/156 (19%)
Query: 1 MPQPVNPELTTGRITGPVDRLNHFQVEISFTWEVTNYNIRLFEDARSLMLRRE----SLR 56
MPQPVNP+L+ ITG +RLN F+V I+ ++ + + LFED R L + S
Sbjct: 267 MPQPVNPQLSAWTITGVSERLNFFRVYITLDRKICSNHKLLFEDLRHLQCSLDDTDMSCN 326
Query: 57 SDRSDYFAAWGDWVFSSGKHYWELDVENSWDWALGVC--YWC------------------ 96
+ Y ++WG + SSGKHYWE+DV++S +W +G+C W
Sbjct: 327 PTSTQYTSSWGAQILSSGKHYWEVDVKDSCNWVIGLCREAWTKRNDMRLDSEGIFLLLCL 386
Query: 97 ------HLKTSSPLLSQYTERPLGQMGVFLDYECGM 126
L ++SPLL Y RP G +GVFLDYECG+
Sbjct: 387 KVDDHFSLFSTSPLLPHYIPRPQGWLGVFLDYECGI 422
>gi|169202375 PREDICTED: tripartite motif-containing protein
64B-like [Homo sapiens]
Length = 449
Score = 106 bits (265), Expect = 6e-24
Identities = 63/154 (40%), Positives = 83/154 (53%), Gaps = 30/154 (19%)
Query: 2 PQPVNPELTTGRITGPVDRLNHFQVEISFTWEVTNYNIRLFEDARSLMLRRESLRSDRS- 60
PQPVNPELT+ ITG +D LN+F+V+ + + E+ I L ED R ++ + L +
Sbjct: 262 PQPVNPELTSWCITGVLDMLNNFRVDSALSTEMIPCYISLSEDVRYVIFGDDHLSAPTDP 321
Query: 61 ---DYFAAWGDWVFSSGKHYWELDVENSWDWALGVC------------------------ 93
D FA WG F+SGKHYWE+DV S +W LGVC
Sbjct: 322 QGVDSFAVWGAQAFTSGKHYWEVDVTLSSNWILGVCRDSRTADANFVIDSDERFFLISSK 381
Query: 94 --YWCHLKTSSPLLSQYTERPLGQMGVFLDYECG 125
L T+SP L QY +RPLG++GVFLDY+ G
Sbjct: 382 RSNHYSLSTNSPPLIQYVQRPLGRVGVFLDYDNG 415
>gi|239744448 PREDICTED: hypothetical protein XP_002343148 [Homo
sapiens]
Length = 450
Score = 106 bits (265), Expect = 6e-24
Identities = 60/156 (38%), Positives = 84/156 (53%), Gaps = 30/156 (19%)
Query: 1 MPQPVNPELTTGRITGPVDRLNHFQVEISFTWEVTNYNIRLFEDARSLMLRRE----SLR 56
MPQPVNP+L+ ITG +RLN F+V I+ ++ + + LFED R L + S
Sbjct: 262 MPQPVNPQLSAWTITGVSERLNFFRVYITLDRKICSNHKLLFEDLRHLQCSLDDTDMSCN 321
Query: 57 SDRSDYFAAWGDWVFSSGKHYWELDVENSWDWALGVC--YWC------------------ 96
+ Y ++WG + SSGKHYWE+DV++S +W +G+C W
Sbjct: 322 PTSTQYTSSWGAQILSSGKHYWEVDVKDSCNWVIGLCREAWTKRNDMRLDSEGIFLLLCL 381
Query: 97 ------HLKTSSPLLSQYTERPLGQMGVFLDYECGM 126
L ++SPLL Y RP G +GVFLDYECG+
Sbjct: 382 KVDDHFSLFSTSPLLPHYIPRPQGWLGVFLDYECGI 417
>gi|225903455 tripartite motif-containing 77 [Homo sapiens]
Length = 450
Score = 106 bits (265), Expect = 6e-24
Identities = 60/156 (38%), Positives = 84/156 (53%), Gaps = 30/156 (19%)
Query: 1 MPQPVNPELTTGRITGPVDRLNHFQVEISFTWEVTNYNIRLFEDARSLMLRRE----SLR 56
MPQPVNP+L+ ITG +RLN F+V I+ ++ + + LFED R L + S
Sbjct: 262 MPQPVNPQLSAWTITGVSERLNFFRVYITLDRKICSNHKLLFEDLRHLQCSLDDTDMSCN 321
Query: 57 SDRSDYFAAWGDWVFSSGKHYWELDVENSWDWALGVC--YWC------------------ 96
+ Y ++WG + SSGKHYWE+DV++S +W +G+C W
Sbjct: 322 PTSTQYTSSWGAQILSSGKHYWEVDVKDSCNWVIGLCREAWTKRNDMRLDSEGIFLLLCL 381
Query: 97 ------HLKTSSPLLSQYTERPLGQMGVFLDYECGM 126
L ++SPLL Y RP G +GVFLDYECG+
Sbjct: 382 KVDDHFSLFSTSPLLPHYIPRPQGWLGVFLDYECGI 417
>gi|239755486 PREDICTED: tripartite motif-containing protein
64C-like isoform 2 [Homo sapiens]
Length = 447
Score = 103 bits (257), Expect = 5e-23
Identities = 62/154 (40%), Positives = 82/154 (53%), Gaps = 30/154 (19%)
Query: 2 PQPVNPELTTGRITGPVDRLNHFQVEISFTWEVTNYNIRLFEDARSLML----RRESLRS 57
PQPVNPELT+ ITG +D LN+F+V+ + + E+T I L ED R ++ R +
Sbjct: 260 PQPVNPELTSWCITGVLDMLNNFRVDNALSTEMTPCYISLSEDVRRVIFGDDHRSAPMDP 319
Query: 58 DRSDYFAAWGDWVFSSGKHYWELDVENSWDWALGVC------------------------ 93
+ FA W F+SGKHYWE+DV +S +W LGVC
Sbjct: 320 QGVESFAVWCAQAFTSGKHYWEVDVTHSSNWILGVCRDSRTADTNIVIDSDKTFFSISSK 379
Query: 94 --YWCHLKTSSPLLSQYTERPLGQMGVFLDYECG 125
L T+SP L QY +RPLG +GVFLDY+ G
Sbjct: 380 TSNHYSLSTNSPPLIQYVQRPLGWVGVFLDYDNG 413
>gi|239755484 PREDICTED: tripartite motif-containing protein
64C-like isoform 1 [Homo sapiens]
Length = 450
Score = 103 bits (257), Expect = 5e-23
Identities = 62/154 (40%), Positives = 82/154 (53%), Gaps = 30/154 (19%)
Query: 2 PQPVNPELTTGRITGPVDRLNHFQVEISFTWEVTNYNIRLFEDARSLML----RRESLRS 57
PQPVNPELT+ ITG +D LN+F+V+ + + E+T I L ED R ++ R +
Sbjct: 263 PQPVNPELTSWCITGVLDMLNNFRVDNALSTEMTPCYISLSEDVRRVIFGDDHRSAPMDP 322
Query: 58 DRSDYFAAWGDWVFSSGKHYWELDVENSWDWALGVC------------------------ 93
+ FA W F+SGKHYWE+DV +S +W LGVC
Sbjct: 323 QGVESFAVWCAQAFTSGKHYWEVDVTHSSNWILGVCRDSRTADTNIVIDSDKTFFSISSK 382
Query: 94 --YWCHLKTSSPLLSQYTERPLGQMGVFLDYECG 125
L T+SP L QY +RPLG +GVFLDY+ G
Sbjct: 383 TSNHYSLSTNSPPLIQYVQRPLGWVGVFLDYDNG 416
>gi|239750044 PREDICTED: tripartite motif-containing protein
64C-like isoform 2 [Homo sapiens]
Length = 447
Score = 103 bits (257), Expect = 5e-23
Identities = 62/154 (40%), Positives = 82/154 (53%), Gaps = 30/154 (19%)
Query: 2 PQPVNPELTTGRITGPVDRLNHFQVEISFTWEVTNYNIRLFEDARSLML----RRESLRS 57
PQPVNPELT+ ITG +D LN+F+V+ + + E+T I L ED R ++ R +
Sbjct: 260 PQPVNPELTSWCITGVLDMLNNFRVDNALSTEMTPCYISLSEDVRRVIFGDDHRSAPMDP 319
Query: 58 DRSDYFAAWGDWVFSSGKHYWELDVENSWDWALGVC------------------------ 93
+ FA W F+SGKHYWE+DV +S +W LGVC
Sbjct: 320 QGVESFAVWCAQAFTSGKHYWEVDVTHSSNWILGVCRDSRTADTNIVIDSDKTFFSISSK 379
Query: 94 --YWCHLKTSSPLLSQYTERPLGQMGVFLDYECG 125
L T+SP L QY +RPLG +GVFLDY+ G
Sbjct: 380 TSNHYSLSTNSPPLIQYVQRPLGWVGVFLDYDNG 413
>gi|239750042 PREDICTED: tripartite motif-containing protein
64C-like isoform 1 [Homo sapiens]
Length = 450
Score = 103 bits (257), Expect = 5e-23
Identities = 62/154 (40%), Positives = 82/154 (53%), Gaps = 30/154 (19%)
Query: 2 PQPVNPELTTGRITGPVDRLNHFQVEISFTWEVTNYNIRLFEDARSLML----RRESLRS 57
PQPVNPELT+ ITG +D LN+F+V+ + + E+T I L ED R ++ R +
Sbjct: 263 PQPVNPELTSWCITGVLDMLNNFRVDNALSTEMTPCYISLSEDVRRVIFGDDHRSAPMDP 322
Query: 58 DRSDYFAAWGDWVFSSGKHYWELDVENSWDWALGVC------------------------ 93
+ FA W F+SGKHYWE+DV +S +W LGVC
Sbjct: 323 QGVESFAVWCAQAFTSGKHYWEVDVTHSSNWILGVCRDSRTADTNIVIDSDKTFFSISSK 382
Query: 94 --YWCHLKTSSPLLSQYTERPLGQMGVFLDYECG 125
L T+SP L QY +RPLG +GVFLDY+ G
Sbjct: 383 TSNHYSLSTNSPPLIQYVQRPLGWVGVFLDYDNG 416
>gi|239744355 PREDICTED: tripartite motif-containing protein
64C-like isoform 1 [Homo sapiens]
Length = 447
Score = 103 bits (257), Expect = 5e-23
Identities = 62/154 (40%), Positives = 82/154 (53%), Gaps = 30/154 (19%)
Query: 2 PQPVNPELTTGRITGPVDRLNHFQVEISFTWEVTNYNIRLFEDARSLML----RRESLRS 57
PQPVNPELT+ ITG +D LN+F+V+ + + E+T I L ED R ++ R +
Sbjct: 260 PQPVNPELTSWCITGVLDMLNNFRVDNALSTEMTPCYISLSEDVRRVIFGDDHRSAPMDP 319
Query: 58 DRSDYFAAWGDWVFSSGKHYWELDVENSWDWALGVC------------------------ 93
+ FA W F+SGKHYWE+DV +S +W LGVC
Sbjct: 320 QGVESFAVWCAQAFTSGKHYWEVDVTHSSNWILGVCRDSRTADTNIVIDSDKTFFSISSK 379
Query: 94 --YWCHLKTSSPLLSQYTERPLGQMGVFLDYECG 125
L T+SP L QY +RPLG +GVFLDY+ G
Sbjct: 380 TSNHYSLSTNSPPLIQYVQRPLGWVGVFLDYDNG 413
>gi|239744353 PREDICTED: tripartite motif-containing protein
64C-like isoform 2 [Homo sapiens]
Length = 450
Score = 103 bits (257), Expect = 5e-23
Identities = 62/154 (40%), Positives = 82/154 (53%), Gaps = 30/154 (19%)
Query: 2 PQPVNPELTTGRITGPVDRLNHFQVEISFTWEVTNYNIRLFEDARSLML----RRESLRS 57
PQPVNPELT+ ITG +D LN+F+V+ + + E+T I L ED R ++ R +
Sbjct: 263 PQPVNPELTSWCITGVLDMLNNFRVDNALSTEMTPCYISLSEDVRRVIFGDDHRSAPMDP 322
Query: 58 DRSDYFAAWGDWVFSSGKHYWELDVENSWDWALGVC------------------------ 93
+ FA W F+SGKHYWE+DV +S +W LGVC
Sbjct: 323 QGVESFAVWCAQAFTSGKHYWEVDVTHSSNWILGVCRDSRTADTNIVIDSDKTFFSISSK 382
Query: 94 --YWCHLKTSSPLLSQYTERPLGQMGVFLDYECG 125
L T+SP L QY +RPLG +GVFLDY+ G
Sbjct: 383 TSNHYSLSTNSPPLIQYVQRPLGWVGVFLDYDNG 416
>gi|89034201 PREDICTED: similar to ring finger protein 18 [Homo
sapiens]
Length = 452
Score = 101 bits (251), Expect = 2e-22
Identities = 61/157 (38%), Positives = 82/157 (52%), Gaps = 36/157 (22%)
Query: 1 MPQPVNPELTTGRITGPVDRLNHFQVEISFTWEVTNYNIRLFEDARSLMLRRES------ 54
MPQP+NPEL+ G ITG DRLN F+V I+ E N +I L+E RS+ + +
Sbjct: 262 MPQPLNPELSAGPITGLRDRLNQFRVHITLHHEEANSDIFLYEILRSMCIGCDHQDVPYF 321
Query: 55 LRSDRSDYFAAWGDWVFSSGKHYWELDVENSWDWALGVC--------------------- 93
+ RS F AWG F+SGK+YWE+ V +SW+WA GVC
Sbjct: 322 TATPRS--FLAWGVQTFTSGKYYWEVHVGDSWNWAFGVCNMYRKEKNQNEKIDGKEGLFL 379
Query: 94 -------YWCHLKTSSPLLSQYTERPLGQMGVFLDYE 123
C L T+SPL+ QY +P ++G+FLD E
Sbjct: 380 LGCIKNDIQCSLFTTSPLMLQYIPKPTSRVGLFLDCE 416
>gi|27484954 PREDICTED: similar to ring finger protein 18 [Homo
sapiens]
Length = 452
Score = 101 bits (251), Expect = 2e-22
Identities = 65/157 (41%), Positives = 83/157 (52%), Gaps = 36/157 (22%)
Query: 1 MPQPVNPELTTGRITGPVDRLNHFQVEISFTWEVTNYNIRLFEDARSLMLRRES------ 54
MPQP+NPEL+ G ITG DRLN F+V I+ E N +I L E RS+ + +
Sbjct: 262 MPQPLNPELSAGPITGLRDRLNQFRVHITLHHEEANSDIFLCEILRSMCIGCDHQDVPYF 321
Query: 55 LRSDRSDYFAAWGDWVFSSGKHYWELDVENSWDWALGVC--YW----------------- 95
+ RS F AWG F+SGK+YWE+ V +SW+WA GVC YW
Sbjct: 322 TATPRS--FLAWGAQTFTSGKYYWEVHVGDSWNWAFGVCNMYWKEKNQNEKIDGEDGLFL 379
Query: 96 --C-------HLKTSSPLLSQYTERPLGQMGVFLDYE 123
C L T+SPLL QY RP ++G+FLD E
Sbjct: 380 LGCVKNDIQRSLFTTSPLLLQYIPRPTSRVGLFLDCE 416
>gi|9966829 ring finger protein 18 [Homo sapiens]
Length = 452
Score = 101 bits (251), Expect = 2e-22
Identities = 61/157 (38%), Positives = 82/157 (52%), Gaps = 36/157 (22%)
Query: 1 MPQPVNPELTTGRITGPVDRLNHFQVEISFTWEVTNYNIRLFEDARSLMLRRES------ 54
MPQP+NPEL+ G ITG DRLN F+V I+ E N +I L+E RS+ + +
Sbjct: 262 MPQPLNPELSAGPITGLRDRLNQFRVHITLHHEEANNDIFLYEILRSMCIGCDHQDVPYF 321
Query: 55 LRSDRSDYFAAWGDWVFSSGKHYWELDVENSWDWALGVC--------------------- 93
+ RS F AWG F+SGK+YWE+ V +SW+WA GVC
Sbjct: 322 TATPRS--FLAWGVQTFTSGKYYWEVHVGDSWNWAFGVCNMYRKEKNQNEKIDGKAGLFL 379
Query: 94 -------YWCHLKTSSPLLSQYTERPLGQMGVFLDYE 123
C L T+SPL+ QY +P ++G+FLD E
Sbjct: 380 LGCVKNDIQCSLFTTSPLMLQYIPKPTSRVGLFLDCE 416
>gi|169202726 PREDICTED: similar to ring finger protein 18 isoform 1
[Homo sapiens]
Length = 452
Score = 100 bits (249), Expect = 4e-22
Identities = 64/157 (40%), Positives = 83/157 (52%), Gaps = 36/157 (22%)
Query: 1 MPQPVNPELTTGRITGPVDRLNHFQVEISFTWEVTNYNIRLFEDARSLMLRRES------ 54
MPQP+NPEL+ G ITG DRLN F+V I+ E N +I L E RS+ + +
Sbjct: 262 MPQPLNPELSAGPITGLRDRLNQFRVHITLHHEEANSDIFLCEILRSMCIGCDHQDVPYF 321
Query: 55 LRSDRSDYFAAWGDWVFSSGKHYWELDVENSWDWALGVC--YW----------------- 95
+ RS F AWG F+SGK+YWE+ V +SW+WA GVC YW
Sbjct: 322 TATPRS--FLAWGAQTFTSGKYYWEVHVGDSWNWAFGVCNMYWKEKNQNEKIDGEDGLFL 379
Query: 96 --C-------HLKTSSPLLSQYTERPLGQMGVFLDYE 123
C L T+SPL+ QY RP ++G+FLD E
Sbjct: 380 LGCVKNDIQRSLFTTSPLMLQYIPRPTSRVGLFLDCE 416
>gi|169203362 PREDICTED: similar to ring finger protein 18 [Homo
sapiens]
Length = 452
Score = 100 bits (249), Expect = 4e-22
Identities = 64/157 (40%), Positives = 83/157 (52%), Gaps = 36/157 (22%)
Query: 1 MPQPVNPELTTGRITGPVDRLNHFQVEISFTWEVTNYNIRLFEDARSLMLRRES------ 54
MPQP+NPEL+ G ITG DRLN F+V I+ E N +I L E RS+ + +
Sbjct: 262 MPQPLNPELSAGPITGLRDRLNQFRVHITLHHEEANSDIFLCEILRSMCIGCDHQDVPYF 321
Query: 55 LRSDRSDYFAAWGDWVFSSGKHYWELDVENSWDWALGVC--YW----------------- 95
+ RS F AWG F+SGK+YWE+ V +SW+WA GVC YW
Sbjct: 322 TATPRS--FLAWGAQTFTSGKYYWEVHVGDSWNWAFGVCNMYWKEKNQNEKIDGEDGLFL 379
Query: 96 --C-------HLKTSSPLLSQYTERPLGQMGVFLDYE 123
C L T+SPL+ QY RP ++G+FLD E
Sbjct: 380 LGCVKNDIQRSLFTTSPLMLQYIPRPTSRVGLFLDCE 416
>gi|157502227 hypothetical protein LOC729384 [Homo sapiens]
Length = 452
Score = 97.1 bits (240), Expect = 5e-21
Identities = 59/155 (38%), Positives = 76/155 (49%), Gaps = 32/155 (20%)
Query: 1 MPQPVNPELTTGRITGPVDRLNHFQVEISFTWEVTNYNIRLFEDARSLMLRRESLRSDR- 59
MPQP+N EL G ITG DRLN F+V+I+ N +I D RS+ + + +
Sbjct: 262 MPQPLNLELRAGPITGLRDRLNQFRVDITLPHNEANSHIFRRGDLRSICIGCDRQNAPHI 321
Query: 60 ---SDYFAAWGDWVFSSGKHYWELDVENSWDWALGVC--YW------------------- 95
F AWG F+SGK+YWE+ V +SW+WA GVC YW
Sbjct: 322 TATPTSFLAWGAQTFTSGKYYWEVHVGDSWNWAFGVCNKYWKGTNQNGNIHGEEGLFSLG 381
Query: 96 -------CHLKTSSPLLSQYTERPLGQMGVFLDYE 123
C L T+SPL QY RP +G+FLD E
Sbjct: 382 CVKNDIQCSLFTTSPLTLQYVPRPTNHVGLFLDCE 416
>gi|169203039 PREDICTED: similar to ring finger protein 18 isoform 1
[Homo sapiens]
Length = 452
Score = 97.1 bits (240), Expect = 5e-21
Identities = 59/155 (38%), Positives = 76/155 (49%), Gaps = 32/155 (20%)
Query: 1 MPQPVNPELTTGRITGPVDRLNHFQVEISFTWEVTNYNIRLFEDARSLMLRRESLRSDR- 59
MPQP+N EL G ITG DRLN F+V+I+ N +I D RS+ + + +
Sbjct: 262 MPQPLNLELRAGPITGLRDRLNQFRVDITLPHNEANSHIFRRGDLRSICIGCDRQNAPHI 321
Query: 60 ---SDYFAAWGDWVFSSGKHYWELDVENSWDWALGVC--YW------------------- 95
F AWG F+SGK+YWE+ V +SW+WA GVC YW
Sbjct: 322 TATPTSFLAWGAQTFTSGKYYWEVHVGDSWNWAFGVCNKYWKGTNQNGNIHGEEGLFSLG 381
Query: 96 -------CHLKTSSPLLSQYTERPLGQMGVFLDYE 123
C L T+SPL QY RP +G+FLD E
Sbjct: 382 CVKNDIQCSLFTTSPLTLQYVPRPTNHVGLFLDCE 416
>gi|239755646 PREDICTED: similar to ring finger protein 18 [Homo
sapiens]
Length = 452
Score = 97.1 bits (240), Expect = 5e-21
Identities = 59/155 (38%), Positives = 76/155 (49%), Gaps = 32/155 (20%)
Query: 1 MPQPVNPELTTGRITGPVDRLNHFQVEISFTWEVTNYNIRLFEDARSLMLRRESLRSDR- 59
MPQP+N EL G ITG DRLN F+V+I+ N +I D RS+ + + +
Sbjct: 262 MPQPLNLELRAGPITGLRDRLNQFRVDITLPHNEANSHIFRRGDLRSICIGCDRQNAPHI 321
Query: 60 ---SDYFAAWGDWVFSSGKHYWELDVENSWDWALGVC--YW------------------- 95
F AWG F+SGK+YWE+ V +SW+WA GVC YW
Sbjct: 322 TATPTSFLAWGAQTFTSGKYYWEVHVGDSWNWAFGVCNKYWKGTNQNGNIHGEEGLFSLG 381
Query: 96 -------CHLKTSSPLLSQYTERPLGQMGVFLDYE 123
C L T+SPL QY RP +G+FLD E
Sbjct: 382 CVKNDIQCSLFTTSPLTLQYVPRPTNHVGLFLDCE 416
>gi|169203034 PREDICTED: similar to ring finger protein 18 [Homo
sapiens]
Length = 452
Score = 97.1 bits (240), Expect = 5e-21
Identities = 59/155 (38%), Positives = 76/155 (49%), Gaps = 32/155 (20%)
Query: 1 MPQPVNPELTTGRITGPVDRLNHFQVEISFTWEVTNYNIRLFEDARSLMLRRESLRSDR- 59
MPQP+N EL G ITG DRLN F+V+I+ N +I D RS+ + + +
Sbjct: 262 MPQPLNLELRAGPITGLRDRLNQFRVDITLPHNEANSHIFRRGDLRSICIGCDRQNAPHI 321
Query: 60 ---SDYFAAWGDWVFSSGKHYWELDVENSWDWALGVC--YW------------------- 95
F AWG F+SGK+YWE+ V +SW+WA GVC YW
Sbjct: 322 TATPTSFLAWGAQTFTSGKYYWEVHVGDSWNWAFGVCNKYWKGTNQNGNIHGEEGLFSLG 381
Query: 96 -------CHLKTSSPLLSQYTERPLGQMGVFLDYE 123
C L T+SPL QY RP +G+FLD E
Sbjct: 382 CVKNDIQCSLFTTSPLTLQYVPRPTNHVGLFLDCE 416
>gi|89034196 PREDICTED: similar to ring finger protein 18 [Homo
sapiens]
Length = 452
Score = 97.1 bits (240), Expect = 5e-21
Identities = 59/155 (38%), Positives = 76/155 (49%), Gaps = 32/155 (20%)
Query: 1 MPQPVNPELTTGRITGPVDRLNHFQVEISFTWEVTNYNIRLFEDARSLMLRRESLRSDR- 59
MPQP+N EL G ITG DRLN F+V+I+ N +I D RS+ + + +
Sbjct: 262 MPQPLNLELRAGPITGLRDRLNQFRVDITLPHNEANSHIFRRGDLRSICIGCDRQNAPHI 321
Query: 60 ---SDYFAAWGDWVFSSGKHYWELDVENSWDWALGVC--YW------------------- 95
F AWG F+SGK+YWE+ V +SW+WA GVC YW
Sbjct: 322 TATPTSFLAWGAQTFTSGKYYWEVHVGDSWNWAFGVCNKYWKGTNQNGNIHGEEGLFSLG 381
Query: 96 -------CHLKTSSPLLSQYTERPLGQMGVFLDYE 123
C L T+SPL QY RP +G+FLD E
Sbjct: 382 CVKNDIQCSLFTTSPLTLQYVPRPTNHVGLFLDCE 416
>gi|209862805 SPRY domain containing 5 [Homo sapiens]
Length = 452
Score = 95.9 bits (237), Expect = 1e-20
Identities = 56/153 (36%), Positives = 81/153 (52%), Gaps = 32/153 (20%)
Query: 3 QPVNPELTTGRITGPVDRLNHFQVEISFTWEVTNYNIRLFEDARSLML----RRESLRSD 58
+PVNPEL+ G ITG +D L+ F+V+ + E N +I L D RS+ + + + +
Sbjct: 264 EPVNPELSAGPITGLLDSLSGFRVDFTLQPERANSHIFLCGDLRSMNVGCDPQDDPDITG 323
Query: 59 RSDYFAAWGDWVFSSGKHYWELDVENSWDWALGVC--YW--------------------- 95
+S+ F WG F+SGK+YWE+ + +SW+WA GVC YW
Sbjct: 324 KSECFLVWGAQAFTSGKYYWEVHMGDSWNWAFGVCNNYWKEKRQNDKIDGEEGLFLLGCV 383
Query: 96 -----CHLKTSSPLLSQYTERPLGQMGVFLDYE 123
C L T+SPL+ QY RP +G+FLD E
Sbjct: 384 KEDTHCSLFTTSPLVVQYVPRPTSTVGLFLDCE 416
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.136 0.452
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,516,212
Number of Sequences: 37866
Number of extensions: 217595
Number of successful extensions: 667
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 126
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 440
Number of HSP's gapped (non-prelim): 158
length of query: 143
length of database: 18,247,518
effective HSP length: 92
effective length of query: 51
effective length of database: 14,763,846
effective search space: 752956146
effective search space used: 752956146
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.