Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239757896
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239757896 PREDICTED: similar to hCG1793821 [Homo sapiens]
(131 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239757896 PREDICTED: similar to hCG1793821 [Homo sapiens] 267 2e-72
gi|239752409 PREDICTED: similar to hCG1793821 [Homo sapiens] 267 2e-72
gi|239746926 PREDICTED: similar to hCG1793821 [Homo sapiens] 265 8e-72
gi|4507669 tumor protein, translationally-controlled 1 [Homo sap... 151 1e-37
gi|46409468 hypothetical protein LOC392490 [Homo sapiens] 108 1e-24
gi|169178083 PREDICTED: similar to tumor protein, translationall... 108 2e-24
gi|169179309 PREDICTED: similar to tumor protein, translationall... 108 2e-24
gi|169181065 PREDICTED: similar to tumor protein, translationall... 106 6e-24
gi|117414135 apoptosis inhibitor [Homo sapiens] 85 2e-17
gi|162951881 tousled-like kinase 2 isoform B [Homo sapiens] 29 1.2
gi|45643117 tousled-like kinase 2 isoform A [Homo sapiens] 29 1.2
gi|150010639 ubiquitin thiolesterase 22 [Homo sapiens] 28 1.6
gi|41152235 ubiquitin specific protease 51 [Homo sapiens] 28 1.6
gi|211971038 tousled-like kinase 1 isoform 3 [Homo sapiens] 28 2.7
gi|211971036 tousled-like kinase 1 isoform 2 [Homo sapiens] 28 2.7
gi|33636698 tousled-like kinase 1 isoform 1 [Homo sapiens] 28 2.7
gi|223005906 X-linked ubiquitin thioesterase 27 [Homo sapiens] 27 3.5
gi|162287219 prune homolog 2 [Homo sapiens] 27 3.5
gi|124494247 myosin IC isoform b [Homo sapiens] 27 4.6
gi|124494238 myosin IC isoform a [Homo sapiens] 27 4.6
gi|124494240 myosin IC isoform c [Homo sapiens] 27 4.6
gi|239756943 PREDICTED: hypothetical protein [Homo sapiens] 27 4.6
gi|239751443 PREDICTED: hypothetical protein [Homo sapiens] 27 4.6
gi|239745948 PREDICTED: hypothetical protein XP_002343622 [Homo ... 27 4.6
gi|38788445 ornithine carbamoyltransferase precursor [Homo sapiens] 27 6.0
gi|40354216 sine oculis homeobox homolog 5 [Homo sapiens] 27 6.0
gi|56606114 trichohyalin-like 1 [Homo sapiens] 27 6.0
gi|146261165 phospholipase inhibitor [Homo sapiens] 26 7.8
>gi|239757896 PREDICTED: similar to hCG1793821 [Homo sapiens]
Length = 131
Score = 267 bits (682), Expect = 2e-72
Identities = 131/131 (100%), Positives = 131/131 (100%)
Query: 1 MIIYPDLISHSEIYKNQEITKGPCLEVEGKIVSRTEDNIDGSLIGRNASTEVPEGEETQS 60
MIIYPDLISHSEIYKNQEITKGPCLEVEGKIVSRTEDNIDGSLIGRNASTEVPEGEETQS
Sbjct: 1 MIIYPDLISHSEIYKNQEITKGPCLEVEGKIVSRTEDNIDGSLIGRNASTEVPEGEETQS 60
Query: 61 TVITGVDVMHYHLQETSFTKEASHPCNFKIYQFFIGENKNLDSVVALLDYCEDTVILHML 120
TVITGVDVMHYHLQETSFTKEASHPCNFKIYQFFIGENKNLDSVVALLDYCEDTVILHML
Sbjct: 61 TVITGVDVMHYHLQETSFTKEASHPCNFKIYQFFIGENKNLDSVVALLDYCEDTVILHML 120
Query: 121 FFXDDLEMKNY 131
FF DDLEMKNY
Sbjct: 121 FFXDDLEMKNY 131
>gi|239752409 PREDICTED: similar to hCG1793821 [Homo sapiens]
Length = 131
Score = 267 bits (682), Expect = 2e-72
Identities = 130/131 (99%), Positives = 130/131 (99%)
Query: 1 MIIYPDLISHSEIYKNQEITKGPCLEVEGKIVSRTEDNIDGSLIGRNASTEVPEGEETQS 60
MIIYPDLISHSEIYKNQEITKGPCLEVEGKIVSRTEDNIDGSLIGRNASTEVPEGEETQS
Sbjct: 1 MIIYPDLISHSEIYKNQEITKGPCLEVEGKIVSRTEDNIDGSLIGRNASTEVPEGEETQS 60
Query: 61 TVITGVDVMHYHLQETSFTKEASHPCNFKIYQFFIGENKNLDSVVALLDYCEDTVILHML 120
TVITGVDVMHYHLQETSFTKEASHPCNFKIYQFFIGENKNLDSVVALLDYCEDTVILHML
Sbjct: 61 TVITGVDVMHYHLQETSFTKEASHPCNFKIYQFFIGENKNLDSVVALLDYCEDTVILHML 120
Query: 121 FFXDDLEMKNY 131
FF DDLEMKNY
Sbjct: 121 FFKDDLEMKNY 131
>gi|239746926 PREDICTED: similar to hCG1793821 [Homo sapiens]
Length = 131
Score = 265 bits (677), Expect = 8e-72
Identities = 129/131 (98%), Positives = 129/131 (98%)
Query: 1 MIIYPDLISHSEIYKNQEITKGPCLEVEGKIVSRTEDNIDGSLIGRNASTEVPEGEETQS 60
MIIYPDLISHSEIYKNQEITKGPCLEVEGKIVSRTEDN DGSLIGRNASTEVPEGEETQS
Sbjct: 1 MIIYPDLISHSEIYKNQEITKGPCLEVEGKIVSRTEDNTDGSLIGRNASTEVPEGEETQS 60
Query: 61 TVITGVDVMHYHLQETSFTKEASHPCNFKIYQFFIGENKNLDSVVALLDYCEDTVILHML 120
TVITGVDVMHYHLQETSFTKEASHPCNFKIYQFFIGENKNLDSVVALLDYCEDTVILHML
Sbjct: 61 TVITGVDVMHYHLQETSFTKEASHPCNFKIYQFFIGENKNLDSVVALLDYCEDTVILHML 120
Query: 121 FFXDDLEMKNY 131
FF DDLEMKNY
Sbjct: 121 FFKDDLEMKNY 131
>gi|4507669 tumor protein, translationally-controlled 1 [Homo
sapiens]
Length = 172
Score = 151 bits (382), Expect = 1e-37
Identities = 94/170 (55%), Positives = 104/170 (61%), Gaps = 41/170 (24%)
Query: 1 MIIYPDLISH----SEIYKNQEITKGPCLEVEGKIVSRTEDNIDGSLIGRNASTEVPEGE 56
MIIY DLISH S+IYK +EI G CLEVEGK+VSRTE NID SLIG NAS E PEGE
Sbjct: 1 MIIYRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGE 60
Query: 57 ETQSTVITGVD-VMHYHLQETSFTKEASHP------------------------------ 85
T+STVITGVD VM++HLQETSFTKEA
Sbjct: 61 GTESTVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAE 120
Query: 86 ------CNFKIYQFFIGENKNLDSVVALLDYCEDTVILHMLFFXDDLEMK 129
NFK YQFFIGEN N D +VALLDY ED V +M+FF D LEM+
Sbjct: 121 QIKHILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEME 170
>gi|46409468 hypothetical protein LOC392490 [Homo sapiens]
Length = 140
Score = 108 bits (270), Expect = 1e-24
Identities = 63/91 (69%), Positives = 70/91 (76%), Gaps = 5/91 (5%)
Query: 1 MIIYPDLISHSEI----YKNQEITKGPCLEVEGKIVSRTEDNIDGSLIGRNASTEVPEGE 56
MI Y DLISHSE+ Y +QEI G LEVEGKIVSRTE NI SLIG NAS E PEG+
Sbjct: 6 MITYWDLISHSEMFSDSYMSQEIADGLRLEVEGKIVSRTEGNIFDSLIGGNASAEGPEGK 65
Query: 57 ETQSTVITGVD-VMHYHLQETSFTKEASHPC 86
T+STVITGVD VM++HLQETSFTKEA + C
Sbjct: 66 GTESTVITGVDSVMNHHLQETSFTKEAYNKC 96
>gi|169178083 PREDICTED: similar to tumor protein,
translationally-controlled 1 [Homo sapiens]
Length = 138
Score = 108 bits (269), Expect = 2e-24
Identities = 68/134 (50%), Positives = 75/134 (55%), Gaps = 37/134 (27%)
Query: 31 IVSRTEDNIDGSLIGRNASTEVPEGEETQSTVITGVD-VMHYHLQETSFTKEASHP---- 85
+VSRTE NID SLIG N S E PEGE T+STVIT VD VM++HLQETSFTKEA
Sbjct: 1 MVSRTEGNIDDSLIGGNVSAEGPEGEGTESTVITAVDVVMNHHLQETSFTKEAHKKYIKD 60
Query: 86 --------------------------------CNFKIYQFFIGENKNLDSVVALLDYCED 113
NFK YQFFIGEN N D +VALLDY ED
Sbjct: 61 YMKSIKGKLEELRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDYGED 120
Query: 114 TVILHMLFFXDDLE 127
V +M+FF D LE
Sbjct: 121 GVTPYMIFFRDGLE 134
>gi|169179309 PREDICTED: similar to tumor protein,
translationally-controlled 1 [Homo sapiens]
Length = 138
Score = 108 bits (269), Expect = 2e-24
Identities = 68/134 (50%), Positives = 75/134 (55%), Gaps = 37/134 (27%)
Query: 31 IVSRTEDNIDGSLIGRNASTEVPEGEETQSTVITGVD-VMHYHLQETSFTKEASHP---- 85
+VSRTE NID SLIG N S E PEGE T+STVIT VD VM++HLQETSFTKEA
Sbjct: 1 MVSRTEGNIDDSLIGGNVSAEGPEGEGTESTVITAVDVVMNHHLQETSFTKEAHKKYIKD 60
Query: 86 --------------------------------CNFKIYQFFIGENKNLDSVVALLDYCED 113
NFK YQFFIGEN N D +VALLDY ED
Sbjct: 61 YMKSIKGKLEELRPERVKPFMTGAAEQIKHILANFKNYQFFIGENMNPDGMVALLDYGED 120
Query: 114 TVILHMLFFXDDLE 127
V +M+FF D LE
Sbjct: 121 GVTPYMIFFRDGLE 134
>gi|169181065 PREDICTED: similar to tumor protein,
translationally-controlled 1 [Homo sapiens]
Length = 138
Score = 106 bits (264), Expect = 6e-24
Identities = 67/134 (50%), Positives = 74/134 (55%), Gaps = 37/134 (27%)
Query: 31 IVSRTEDNIDGSLIGRNASTEVPEGEETQSTVITGVD-VMHYHLQETSFTKEASHP---- 85
+VSRTE NID SLIG N S E PEGE T+STVIT VD VM++HLQETSFTKEA
Sbjct: 1 MVSRTEGNIDDSLIGGNVSAEGPEGEGTESTVITAVDVVMNHHLQETSFTKEAHKKYIKD 60
Query: 86 --------------------------------CNFKIYQFFIGENKNLDSVVALLDYCED 113
NFK Y FFIGEN N D +VALLDY ED
Sbjct: 61 YMKSIKGKLEELRPERVKPFMTGAAEQIKHILANFKNYHFFIGENMNPDGMVALLDYGED 120
Query: 114 TVILHMLFFXDDLE 127
V +M+FF D LE
Sbjct: 121 GVTPYMIFFRDGLE 134
>gi|117414135 apoptosis inhibitor [Homo sapiens]
Length = 127
Score = 84.7 bits (208), Expect = 2e-17
Identities = 44/73 (60%), Positives = 57/73 (78%), Gaps = 1/73 (1%)
Query: 11 SEIYKNQEITKGPCLEVEGKIVSRTEDNIDGSLIGRNASTEVPEGEETQSTVITGVDVM- 69
S+IYK EIT G CLEVE K++S+T N D SLIGRN+S+E E E T+ST+IT VD++
Sbjct: 3 SDIYKIWEITNGLCLEVEQKMLSKTTGNTDDSLIGRNSSSESTEDEVTESTIITSVDIVT 62
Query: 70 HYHLQETSFTKEA 82
++HLQE+ FTKEA
Sbjct: 63 NHHLQESIFTKEA 75
>gi|162951881 tousled-like kinase 2 isoform B [Homo sapiens]
Length = 718
Score = 28.9 bits (63), Expect = 1.2
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 70 HYHL-QETSFTKEASHPCNFKIYQFFIGENKNLDSVVALLDYCE 112
H H +E KE HP K+Y +F + + DS +L+YCE
Sbjct: 454 HKHACREYRIHKELDHPRIVKLYDYF---SLDTDSFCTVLEYCE 494
>gi|45643117 tousled-like kinase 2 isoform A [Homo sapiens]
Length = 750
Score = 28.9 bits (63), Expect = 1.2
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 70 HYHL-QETSFTKEASHPCNFKIYQFFIGENKNLDSVVALLDYCE 112
H H +E KE HP K+Y +F + + DS +L+YCE
Sbjct: 486 HKHACREYRIHKELDHPRIVKLYDYF---SLDTDSFCTVLEYCE 526
>gi|150010639 ubiquitin thiolesterase 22 [Homo sapiens]
Length = 525
Score = 28.5 bits (62), Expect = 1.6
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 54 EGEETQSTVITGVDVMHYHLQETSFTKEASHP--CNFKIYQFFIG 96
E ++ +I +DV+H H + K+A++P CN I Q F G
Sbjct: 259 EQQDAHEFLIAALDVLHRHCKGDDNGKKANNPNHCNCIIDQIFTG 303
>gi|41152235 ubiquitin specific protease 51 [Homo sapiens]
Length = 711
Score = 28.5 bits (62), Expect = 1.6
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 56 EETQSTVITGVDVMHYHLQETSFTKEASHP--CNFKIYQFFIG 96
++ +I +DV+H H ++ S +EA++P CN I Q F G
Sbjct: 448 QDAHEFLIAILDVLHRHSKDDSGGQEANNPNCCNCIIDQIFTG 490
>gi|211971038 tousled-like kinase 1 isoform 3 [Homo sapiens]
Length = 670
Score = 27.7 bits (60), Expect = 2.7
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 70 HYHL-QETSFTKEASHPCNFKIYQFFIGENKNLDSVVALLDYCE 112
H H +E KE HP K+Y +F + + D+ +L+YCE
Sbjct: 406 HKHACREYRIHKELDHPRIVKLYDYF---SLDTDTFCTVLEYCE 446
>gi|211971036 tousled-like kinase 1 isoform 2 [Homo sapiens]
Length = 718
Score = 27.7 bits (60), Expect = 2.7
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 70 HYHL-QETSFTKEASHPCNFKIYQFFIGENKNLDSVVALLDYCE 112
H H +E KE HP K+Y +F + + D+ +L+YCE
Sbjct: 454 HKHACREYRIHKELDHPRIVKLYDYF---SLDTDTFCTVLEYCE 494
>gi|33636698 tousled-like kinase 1 isoform 1 [Homo sapiens]
Length = 766
Score = 27.7 bits (60), Expect = 2.7
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 70 HYHL-QETSFTKEASHPCNFKIYQFFIGENKNLDSVVALLDYCE 112
H H +E KE HP K+Y +F + + D+ +L+YCE
Sbjct: 502 HKHACREYRIHKELDHPRIVKLYDYF---SLDTDTFCTVLEYCE 542
>gi|223005906 X-linked ubiquitin thioesterase 27 [Homo sapiens]
Length = 438
Score = 27.3 bits (59), Expect = 3.5
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Query: 56 EETQSTVITGVDVMHYHLQETSFTKEASHP--CNFKIYQFFIG 96
++ +I +DV+H H + K A++P CN I Q F G
Sbjct: 163 QDAHEFLIAALDVLHRHCKGDDVGKAANNPNHCNCIIDQIFTG 205
>gi|162287219 prune homolog 2 [Homo sapiens]
Length = 3088
Score = 27.3 bits (59), Expect = 3.5
Identities = 23/82 (28%), Positives = 31/82 (37%), Gaps = 2/82 (2%)
Query: 5 PDLISHSEIYKNQEITKGPCL--EVEGKIVSRTEDNIDGSLIGRNASTEVPEGEETQSTV 62
PD+ SE + E C+ EVE + TE ID I VP E S
Sbjct: 2105 PDICHDSEAKQETEKHLSACMGPEVESSELCLTEPEIDEEPIYEPGREFVPSNAELDSEN 2164
Query: 63 ITGVDVMHYHLQETSFTKEASH 84
T + + Y ++ ASH
Sbjct: 2165 ATVLPPIGYQADIKGSSQPASH 2186
>gi|124494247 myosin IC isoform b [Homo sapiens]
Length = 1044
Score = 26.9 bits (58), Expect = 4.6
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 31 IVSRTEDNIDGSLIGRNASTEVPEGEETQSTVITGVDVMHYHL-QETSFTKEASHPCNFK 89
+ SRT + G + AS +V +TV+ +D+ + + Q SF + + CN K
Sbjct: 366 VYSRTFTWLVGKINRSLASKDVESPSWRSTTVLGLLDIYGFEVFQHNSFEQFCINYCNEK 425
Query: 90 IYQFFI 95
+ Q FI
Sbjct: 426 LQQLFI 431
>gi|124494238 myosin IC isoform a [Homo sapiens]
Length = 1063
Score = 26.9 bits (58), Expect = 4.6
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 31 IVSRTEDNIDGSLIGRNASTEVPEGEETQSTVITGVDVMHYHL-QETSFTKEASHPCNFK 89
+ SRT + G + AS +V +TV+ +D+ + + Q SF + + CN K
Sbjct: 385 VYSRTFTWLVGKINRSLASKDVESPSWRSTTVLGLLDIYGFEVFQHNSFEQFCINYCNEK 444
Query: 90 IYQFFI 95
+ Q FI
Sbjct: 445 LQQLFI 450
>gi|124494240 myosin IC isoform c [Homo sapiens]
Length = 1028
Score = 26.9 bits (58), Expect = 4.6
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 31 IVSRTEDNIDGSLIGRNASTEVPEGEETQSTVITGVDVMHYHL-QETSFTKEASHPCNFK 89
+ SRT + G + AS +V +TV+ +D+ + + Q SF + + CN K
Sbjct: 350 VYSRTFTWLVGKINRSLASKDVESPSWRSTTVLGLLDIYGFEVFQHNSFEQFCINYCNEK 409
Query: 90 IYQFFI 95
+ Q FI
Sbjct: 410 LQQLFI 415
>gi|239756943 PREDICTED: hypothetical protein [Homo sapiens]
Length = 783
Score = 26.9 bits (58), Expect = 4.6
Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Query: 9 SHSEIYKNQEITKGPCLEVEGKIVSRTEDNIDGSLIGRNASTEVPEG 55
SHSE + P EVEGK VSR DG +N E P G
Sbjct: 322 SHSEDHPAPGPVVLPGQEVEGKDVSRQTREADGE---QNPKEEAPRG 365
>gi|239751443 PREDICTED: hypothetical protein [Homo sapiens]
Length = 783
Score = 26.9 bits (58), Expect = 4.6
Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Query: 9 SHSEIYKNQEITKGPCLEVEGKIVSRTEDNIDGSLIGRNASTEVPEG 55
SHSE + P EVEGK VSR DG +N E P G
Sbjct: 322 SHSEDHPAPGPVVLPGQEVEGKDVSRQTREADGE---QNPKEEAPRG 365
>gi|239745948 PREDICTED: hypothetical protein XP_002343622 [Homo
sapiens]
Length = 791
Score = 26.9 bits (58), Expect = 4.6
Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Query: 9 SHSEIYKNQEITKGPCLEVEGKIVSRTEDNIDGSLIGRNASTEVPEG 55
SHSE + P EVEGK VSR DG +N E P G
Sbjct: 330 SHSEDHPAPGPVVLPGQEVEGKDVSRQTREADGE---QNPKEEAPRG 373
>gi|38788445 ornithine carbamoyltransferase precursor [Homo sapiens]
Length = 354
Score = 26.6 bits (57), Expect = 6.0
Identities = 12/42 (28%), Positives = 17/42 (40%)
Query: 75 ETSFTKEASHPCNFKIYQFFIGENKNLDSVVALLDYCEDTVI 116
ET F HPC +G N++L +L D V+
Sbjct: 98 ETGFALLGGHPCFLTTQDIHLGVNESLTDTARVLSSMADAVL 139
>gi|40354216 sine oculis homeobox homolog 5 [Homo sapiens]
Length = 739
Score = 26.6 bits (57), Expect = 6.0
Identities = 14/47 (29%), Positives = 24/47 (51%)
Query: 18 EITKGPCLEVEGKIVSRTEDNIDGSLIGRNASTEVPEGEETQSTVIT 64
E KG + ++ + + +G L+G A EV EG E ++ V+T
Sbjct: 680 EAEKGLGTQAPHTVLRLPDPDPEGLLLGATAGGEVDEGLEAEAKVLT 726
>gi|56606114 trichohyalin-like 1 [Homo sapiens]
Length = 904
Score = 26.6 bits (57), Expect = 6.0
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 33 SRTEDNIDGSLIGRNASTEVPEGEETQSTVITGVDVMHYHLQETSFT-KEASH 84
++T+D L G + S + +G ETQ G D H L+ T+ + +EA H
Sbjct: 419 TQTQDGKYQELQGLSKSKDAEKGSETQYLSSEGGDQTHPELEGTAVSGEEAEH 471
>gi|146261165 phospholipase inhibitor [Homo sapiens]
Length = 237
Score = 26.2 bits (56), Expect = 7.8
Identities = 25/93 (26%), Positives = 35/93 (37%), Gaps = 16/93 (17%)
Query: 28 EGKIVSRTEDNIDGSLIGRNASTEVPEGEETQSTVITGVDVMHYHLQETSF--------- 78
+GK S T D +D L +++ E P E+ T G Y ++ F
Sbjct: 101 QGKECSNTSDALDPPLKNVSSNAECPACYESNGTSCRGKPWKCYEEEQCVFLVAELKNDI 160
Query: 79 ------TKEASHPCNFKIYQFFIGENKNLDSVV 105
K S+ N QF GENK L V+
Sbjct: 161 ESKSLVLKGCSNVSN-ATCQFLSGENKTLGGVI 192
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.136 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,579,807
Number of Sequences: 37866
Number of extensions: 170427
Number of successful extensions: 455
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 430
Number of HSP's gapped (non-prelim): 33
length of query: 131
length of database: 18,247,518
effective HSP length: 91
effective length of query: 40
effective length of database: 14,801,712
effective search space: 592068480
effective search space used: 592068480
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.