Guide to the Human Genome
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Name: FLJ44635 Sequence: fasta or formatted (140aa) NCBI GI: 46409468
Description:

hypothetical protein LOC392490

Referenced in:

Histamine

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0          7           2
 C cysteine            0.7          1           1
 D aspartate           4.3          6           1
 E glutamate          10.0         14           2
 F phenylalanine       3.6          5           1
 G glycine             7.9         11           2
 H histidine           2.9          4           2
 I isoleucine          8.6         12           1
 K lysine              9.3         13           1
 L leucine             5.0          7           1
 M methionine          5.0          7           1
 N asparagine          4.3          6           1
 P proline             2.1          3           1
 Q glutamine           3.6          5           1
 R arginine            2.9          4           1
 S serine              8.6         12           1
 T threonine           7.1         10           1
 V valine              5.0          7           1
 W tryptophan          0.7          1           1
 Y tyrosine            3.6          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC392490 
TPT1                  0.805   tumor protein, translationally-controlled 1 
LOC389787             0.588   PREDICTED: similar to tumor protein, translationall...
LOC389787             0.588   PREDICTED: similar to tumor protein, translationall...
LOC389787             0.580   PREDICTED: similar to tumor protein, translationall...
FKSG2                 0.428   apoptosis inhibitor 
LOC643421             0.323   PREDICTED: similar to hCG1793821 
LOC643421             0.323   PREDICTED: similar to hCG1793821 
LOC643421             0.315   PREDICTED: similar to hCG1793821 
HIP1R                 0.027   huntingtin interacting protein-1-related 
LOC100294412          0.027   PREDICTED: similar to KIAA0655 protein 
KIF3C                 0.016   kinesin family member 3C 
DYX1C1                0.012   dyslexia susceptibility 1 candidate 1 isoform c [Hom...
DYX1C1                0.012   dyslexia susceptibility 1 candidate 1 isoform b [Hom...
DYX1C1                0.012   dyslexia susceptibility 1 candidate 1 isoform a [Hom...
PIK3CG                0.012   phosphoinositide-3-kinase, catalytic, gamma polypept...
OXSM                  0.004   3-oxoacyl-ACP synthase, mitochondrial isoform 1 precu...
DAAM1                 0.004   dishevelled-associated activator of morphogenesis 1 ...
ZNF556                0.004   zinc finger protein 556 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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