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Search of human proteins with 239757751
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239757751 PREDICTED: hypothetical protein [Homo sapiens]
(327 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239757751 PREDICTED: hypothetical protein [Homo sapiens] 685 0.0
gi|239752261 PREDICTED: hypothetical protein XP_002348184 [Homo ... 494 e-140
gi|239746774 PREDICTED: hypothetical protein XP_002343845 [Homo ... 494 e-140
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo... 51 2e-06
gi|239757987 PREDICTED: hypothetical protein [Homo sapiens] 43 3e-04
gi|209413756 synapsin III isoform IIIg [Homo sapiens] 41 0.001
gi|209413752 synapsin III isoform IIIa [Homo sapiens] 41 0.001
gi|119395716 forkhead box C1 [Homo sapiens] 40 0.003
gi|224994221 SH3-domain binding protein 2 isoform b [Homo sapiens] 40 0.004
gi|224994219 SH3-domain binding protein 2 isoform c [Homo sapiens] 40 0.004
gi|170014705 SH3-domain binding protein 2 isoform a [Homo sapiens] 40 0.004
gi|170014703 SH3-domain binding protein 2 isoform a [Homo sapiens] 40 0.004
gi|56243590 WD repeat domain 33 isoform 1 [Homo sapiens] 39 0.005
gi|239746104 PREDICTED: hypothetical protein XP_002344198 [Homo ... 39 0.006
gi|54860079 nadrin isoform 1 [Homo sapiens] 39 0.006
gi|54860105 nadrin isoform 2 [Homo sapiens] 39 0.006
gi|14602439 Williams Beuren syndrome chromosome region 14 isofor... 39 0.008
gi|14602437 Williams Beuren syndrome chromosome region 14 isofor... 39 0.008
gi|14602435 Williams Beuren syndrome chromosome region 14 isofor... 39 0.008
gi|14602433 Williams Beuren syndrome chromosome region 14 isofor... 39 0.008
gi|210031233 PR domain containing 6 [Homo sapiens] 39 0.008
gi|38327037 hyperpolarization activated cyclic nucleotide-gated ... 39 0.008
gi|165905613 ring finger and KH domain containing 1 [Homo sapiens] 38 0.011
gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo ... 38 0.014
gi|169207312 PREDICTED: hypothetical protein [Homo sapiens] 38 0.014
gi|239750650 PREDICTED: hypothetical protein [Homo sapiens] 38 0.014
gi|89037350 PREDICTED: hypothetical protein [Homo sapiens] 38 0.014
gi|41281683 disabled homolog 2 interacting protein isoform 2 [Ho... 38 0.014
gi|94967023 disabled homolog 2 interacting protein isoform 1 [Ho... 38 0.014
gi|4885407 hyperpolarization activated cyclic nucleotide-gated p... 37 0.024
>gi|239757751 PREDICTED: hypothetical protein [Homo sapiens]
Length = 327
Score = 685 bits (1768), Expect = 0.0
Identities = 327/327 (100%), Positives = 327/327 (100%)
Query: 1 MTGPVISESDLHWGWEREGIQIQDEELRGEDAMSREQGTISGKMRVPWEDVVYGGVPHTP 60
MTGPVISESDLHWGWEREGIQIQDEELRGEDAMSREQGTISGKMRVPWEDVVYGGVPHTP
Sbjct: 1 MTGPVISESDLHWGWEREGIQIQDEELRGEDAMSREQGTISGKMRVPWEDVVYGGVPHTP 60
Query: 61 GTRELNTRCLKFEISARGRWAVFHHQPSTPKGRCVWRRAGAGIVRSGPGLHGALGPDTGG 120
GTRELNTRCLKFEISARGRWAVFHHQPSTPKGRCVWRRAGAGIVRSGPGLHGALGPDTGG
Sbjct: 61 GTRELNTRCLKFEISARGRWAVFHHQPSTPKGRCVWRRAGAGIVRSGPGLHGALGPDTGG 120
Query: 121 AKLRVRPRRTPPRDPSLPVLGGAKEPGQVEGQEEEGVVRLLEPTPQPPPPSPPRGLADRA 180
AKLRVRPRRTPPRDPSLPVLGGAKEPGQVEGQEEEGVVRLLEPTPQPPPPSPPRGLADRA
Sbjct: 121 AKLRVRPRRTPPRDPSLPVLGGAKEPGQVEGQEEEGVVRLLEPTPQPPPPSPPRGLADRA 180
Query: 181 PRRLNTPPDTLAPRRGVLSGHRLGLQIPRDPDQGSGSLSSQLPTFPLLRKSGQFRDGSQG 240
PRRLNTPPDTLAPRRGVLSGHRLGLQIPRDPDQGSGSLSSQLPTFPLLRKSGQFRDGSQG
Sbjct: 181 PRRLNTPPDTLAPRRGVLSGHRLGLQIPRDPDQGSGSLSSQLPTFPLLRKSGQFRDGSQG 240
Query: 241 GSCKPPRAPLKGSDYTQRLRKKQNHQLYPPSAACLTLPTRLETHTHGKGVHGARSPVYRS 300
GSCKPPRAPLKGSDYTQRLRKKQNHQLYPPSAACLTLPTRLETHTHGKGVHGARSPVYRS
Sbjct: 241 GSCKPPRAPLKGSDYTQRLRKKQNHQLYPPSAACLTLPTRLETHTHGKGVHGARSPVYRS 300
Query: 301 SPELPSFHLHAGSPARLDRSLAKPSQV 327
SPELPSFHLHAGSPARLDRSLAKPSQV
Sbjct: 301 SPELPSFHLHAGSPARLDRSLAKPSQV 327
>gi|239752261 PREDICTED: hypothetical protein XP_002348184 [Homo
sapiens]
Length = 264
Score = 494 bits (1271), Expect = e-140
Identities = 237/237 (100%), Positives = 237/237 (100%)
Query: 91 KGRCVWRRAGAGIVRSGPGLHGALGPDTGGAKLRVRPRRTPPRDPSLPVLGGAKEPGQVE 150
KGRCVWRRAGAGIVRSGPGLHGALGPDTGGAKLRVRPRRTPPRDPSLPVLGGAKEPGQVE
Sbjct: 28 KGRCVWRRAGAGIVRSGPGLHGALGPDTGGAKLRVRPRRTPPRDPSLPVLGGAKEPGQVE 87
Query: 151 GQEEEGVVRLLEPTPQPPPPSPPRGLADRAPRRLNTPPDTLAPRRGVLSGHRLGLQIPRD 210
GQEEEGVVRLLEPTPQPPPPSPPRGLADRAPRRLNTPPDTLAPRRGVLSGHRLGLQIPRD
Sbjct: 88 GQEEEGVVRLLEPTPQPPPPSPPRGLADRAPRRLNTPPDTLAPRRGVLSGHRLGLQIPRD 147
Query: 211 PDQGSGSLSSQLPTFPLLRKSGQFRDGSQGGSCKPPRAPLKGSDYTQRLRKKQNHQLYPP 270
PDQGSGSLSSQLPTFPLLRKSGQFRDGSQGGSCKPPRAPLKGSDYTQRLRKKQNHQLYPP
Sbjct: 148 PDQGSGSLSSQLPTFPLLRKSGQFRDGSQGGSCKPPRAPLKGSDYTQRLRKKQNHQLYPP 207
Query: 271 SAACLTLPTRLETHTHGKGVHGARSPVYRSSPELPSFHLHAGSPARLDRSLAKPSQV 327
SAACLTLPTRLETHTHGKGVHGARSPVYRSSPELPSFHLHAGSPARLDRSLAKPSQV
Sbjct: 208 SAACLTLPTRLETHTHGKGVHGARSPVYRSSPELPSFHLHAGSPARLDRSLAKPSQV 264
>gi|239746774 PREDICTED: hypothetical protein XP_002343845 [Homo
sapiens]
Length = 264
Score = 494 bits (1271), Expect = e-140
Identities = 237/237 (100%), Positives = 237/237 (100%)
Query: 91 KGRCVWRRAGAGIVRSGPGLHGALGPDTGGAKLRVRPRRTPPRDPSLPVLGGAKEPGQVE 150
KGRCVWRRAGAGIVRSGPGLHGALGPDTGGAKLRVRPRRTPPRDPSLPVLGGAKEPGQVE
Sbjct: 28 KGRCVWRRAGAGIVRSGPGLHGALGPDTGGAKLRVRPRRTPPRDPSLPVLGGAKEPGQVE 87
Query: 151 GQEEEGVVRLLEPTPQPPPPSPPRGLADRAPRRLNTPPDTLAPRRGVLSGHRLGLQIPRD 210
GQEEEGVVRLLEPTPQPPPPSPPRGLADRAPRRLNTPPDTLAPRRGVLSGHRLGLQIPRD
Sbjct: 88 GQEEEGVVRLLEPTPQPPPPSPPRGLADRAPRRLNTPPDTLAPRRGVLSGHRLGLQIPRD 147
Query: 211 PDQGSGSLSSQLPTFPLLRKSGQFRDGSQGGSCKPPRAPLKGSDYTQRLRKKQNHQLYPP 270
PDQGSGSLSSQLPTFPLLRKSGQFRDGSQGGSCKPPRAPLKGSDYTQRLRKKQNHQLYPP
Sbjct: 148 PDQGSGSLSSQLPTFPLLRKSGQFRDGSQGGSCKPPRAPLKGSDYTQRLRKKQNHQLYPP 207
Query: 271 SAACLTLPTRLETHTHGKGVHGARSPVYRSSPELPSFHLHAGSPARLDRSLAKPSQV 327
SAACLTLPTRLETHTHGKGVHGARSPVYRSSPELPSFHLHAGSPARLDRSLAKPSQV
Sbjct: 208 SAACLTLPTRLETHTHGKGVHGARSPVYRSSPELPSFHLHAGSPARLDRSLAKPSQV 264
>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
sapiens]
Length = 483
Score = 50.8 bits (120), Expect = 2e-06
Identities = 48/161 (29%), Positives = 66/161 (40%), Gaps = 19/161 (11%)
Query: 122 KLRVRPRRTPPRDPSLPVLGGAKEPGQVEGQEEEGVVRLLEPTPQPPPPSPPRGLADRAP 181
K ++ P PP P LP+L PG ++ + EP P PPPP PP A +P
Sbjct: 249 KPQLAPLHLPPIPPPLPLLPPCGYPG-LKAEPASPAQDAQEP-PAPPPPLPP--YASCSP 304
Query: 182 RRLNTPPDTLAPRRGVLSGHRLGLQIP------RDPDQGSGSLSSQLP-----TFPLLRK 230
R P P GV S +P + P Q +G+ + P + P L+K
Sbjct: 305 RASLPAP----PLPGVNSSSETPPPLPPKSPSFQAPPQKAGAQALPAPPAPPGSQPFLQK 360
Query: 231 SGQFRDGSQGGSCKPPRAPLKGSDYTQRLRKKQNHQLYPPS 271
R G+ GG PP AP S T+ K Q + P+
Sbjct: 361 KRHGRPGAGGGKLNPPPAPPARSPTTELSSKSQQATAWTPT 401
Score = 29.3 bits (64), Expect = 5.0
Identities = 24/74 (32%), Positives = 27/74 (36%), Gaps = 8/74 (10%)
Query: 108 PGLHGALGPDTGGAKLRVRP--RRTPPRDPSLPVLGGAKEPGQVE---GQEEEGVVRLLE 162
P L A D G K P R PR P+ + G P E G R
Sbjct: 107 PVLRPAGQRDVAGGKTGQGPGSRAPSPRLPNKTISGPLIPPASPRLGNTSEAHGAARTAP 166
Query: 163 PTPQ---PPPPSPP 173
P P PPPP+PP
Sbjct: 167 PRPNVPAPPPPTPP 180
>gi|239757987 PREDICTED: hypothetical protein [Homo sapiens]
Length = 445
Score = 43.1 bits (100), Expect = 3e-04
Identities = 40/119 (33%), Positives = 48/119 (40%), Gaps = 16/119 (13%)
Query: 86 QPSTPKGRCVWRRAGAGIVRSGPGLHGALGPDTGGAKLRVR-----PRRTPPRDPSLPVL 140
+P TP GR +G VRSG G A GA VR P R PP P P+
Sbjct: 185 EPKTPPGRS----GPSGGVRSGAGHRAATAEHQLGAGFSVRNGPGPPARLPPAPPGPPL- 239
Query: 141 GGAKEPGQVEGQEEEGVVRLLEPTPQPPPPSPPRGLADRAPRRLNTPPDTLAPRRGVLS 199
P + G RLL T +PP P L R + PP T+ PR VL+
Sbjct: 240 ----RPARPHNPTSRGPGRLL--TCEPPSRKLPPPLPLCRSRWVLAPPPTVRPRLRVLT 292
>gi|209413756 synapsin III isoform IIIg [Homo sapiens]
Length = 579
Score = 41.2 bits (95), Expect = 0.001
Identities = 34/132 (25%), Positives = 50/132 (37%), Gaps = 20/132 (15%)
Query: 132 PRDPSLPVLGGAKEPGQVEGQEEEGVVRLLEPTPQPPPPSPPRGLADRAPRRLNTPPDTL 191
P P P + AK PGQ + + G +P P+PPP PR P+R +P
Sbjct: 405 PLRPWAPQIKSAKSPGQAQLGPQLG-----QPQPRPPPQGGPRQAQSPQPQRSGSPSQQR 459
Query: 192 APRRGVLSGHRLGLQIPRDPDQGSGSLSSQLPTFPLLRKSGQFRDGSQGGS-----CKPP 246
+G Q P P GS + P P L ++ +Q P
Sbjct: 460 LSPQG---------QQPLSPQSGSPQ-QQRSPGSPQLSRASSGSSPNQASKPGATLASQP 509
Query: 247 RAPLKGSDYTQR 258
R P++G +Q+
Sbjct: 510 RPPVQGRSTSQQ 521
>gi|209413752 synapsin III isoform IIIa [Homo sapiens]
Length = 580
Score = 41.2 bits (95), Expect = 0.001
Identities = 34/132 (25%), Positives = 50/132 (37%), Gaps = 20/132 (15%)
Query: 132 PRDPSLPVLGGAKEPGQVEGQEEEGVVRLLEPTPQPPPPSPPRGLADRAPRRLNTPPDTL 191
P P P + AK PGQ + + G +P P+PPP PR P+R +P
Sbjct: 406 PLRPWAPQIKSAKSPGQAQLGPQLG-----QPQPRPPPQGGPRQAQSPQPQRSGSPSQQR 460
Query: 192 APRRGVLSGHRLGLQIPRDPDQGSGSLSSQLPTFPLLRKSGQFRDGSQGGS-----CKPP 246
+G Q P P GS + P P L ++ +Q P
Sbjct: 461 LSPQG---------QQPLSPQSGSPQ-QQRSPGSPQLSRASSGSSPNQASKPGATLASQP 510
Query: 247 RAPLKGSDYTQR 258
R P++G +Q+
Sbjct: 511 RPPVQGRSTSQQ 522
>gi|119395716 forkhead box C1 [Homo sapiens]
Length = 553
Score = 40.0 bits (92), Expect = 0.003
Identities = 47/169 (27%), Positives = 63/169 (37%), Gaps = 40/169 (23%)
Query: 105 RSGPGLHGALGPDT-----GGAKLRVRPRRTPPRDPSLPVLGGAKEPGQVEGQEEEGVVR 159
+ G G + L PD+ G+ LR R R K+ V+ +EE+ +
Sbjct: 145 KPGKGSYWTLDPDSYNMFENGSFLRRRRR--------------FKKKDAVKDKEEKDRLH 190
Query: 160 LLEPTP--QPPPPSPPRGLADRAPR----------------RLNTPPDTLAPRRGVLSGH 201
L EP P + PPP+PP AP +PP L+P + SG
Sbjct: 191 LKEPPPPGRQPPPAPPEQADGNAPGPQPPPVRIQDIKTENGTCPSPPQPLSPAAALGSGS 250
Query: 202 RLGLQIPRDPDQGSGSLSS-QLPTFPLLRKSGQFRDGSQGGSCKPPRAP 249
+ PD S SLSS P L DG+ S PP AP
Sbjct: 251 AAAVPKIESPDSSSSSLSSGSSPPGSLPSARPLSLDGAD--SAPPPPAP 297
>gi|224994221 SH3-domain binding protein 2 isoform b [Homo sapiens]
Length = 618
Score = 39.7 bits (91), Expect = 0.004
Identities = 32/116 (27%), Positives = 47/116 (40%), Gaps = 14/116 (12%)
Query: 163 PTPQPPPPSPPRGLADRAPRRLNTPPDTLAPRRGVLSGHRLGLQIPRDPDQGSGSLSSQL 222
P P PPP P GL D ++ D L PRR ++P P + S S +
Sbjct: 288 PGPLLPPPPPKHGLPDVGLAAEDSKRDPLCPRRAEPCP-----RVPATPRRMSDPPLSTM 342
Query: 223 PTFPLLRKSGQFRDGSQ---------GGSCKPPRAPLKGSDYTQRLRKKQNHQLYP 269
PT P LRK FR+ + G+C A + + ++ K ++ L P
Sbjct: 343 PTAPGLRKPPCFRESASPSPEPWTPGHGACSTSSAAIMATATSRNCDKLKSFHLSP 398
>gi|224994219 SH3-domain binding protein 2 isoform c [Homo sapiens]
Length = 589
Score = 39.7 bits (91), Expect = 0.004
Identities = 32/116 (27%), Positives = 47/116 (40%), Gaps = 14/116 (12%)
Query: 163 PTPQPPPPSPPRGLADRAPRRLNTPPDTLAPRRGVLSGHRLGLQIPRDPDQGSGSLSSQL 222
P P PPP P GL D ++ D L PRR ++P P + S S +
Sbjct: 259 PGPLLPPPPPKHGLPDVGLAAEDSKRDPLCPRRAEPCP-----RVPATPRRMSDPPLSTM 313
Query: 223 PTFPLLRKSGQFRDGSQ---------GGSCKPPRAPLKGSDYTQRLRKKQNHQLYP 269
PT P LRK FR+ + G+C A + + ++ K ++ L P
Sbjct: 314 PTAPGLRKPPCFRESASPSPEPWTPGHGACSTSSAAIMATATSRNCDKLKSFHLSP 369
>gi|170014705 SH3-domain binding protein 2 isoform a [Homo sapiens]
Length = 561
Score = 39.7 bits (91), Expect = 0.004
Identities = 32/116 (27%), Positives = 47/116 (40%), Gaps = 14/116 (12%)
Query: 163 PTPQPPPPSPPRGLADRAPRRLNTPPDTLAPRRGVLSGHRLGLQIPRDPDQGSGSLSSQL 222
P P PPP P GL D ++ D L PRR ++P P + S S +
Sbjct: 231 PGPLLPPPPPKHGLPDVGLAAEDSKRDPLCPRRAEPCP-----RVPATPRRMSDPPLSTM 285
Query: 223 PTFPLLRKSGQFRDGSQ---------GGSCKPPRAPLKGSDYTQRLRKKQNHQLYP 269
PT P LRK FR+ + G+C A + + ++ K ++ L P
Sbjct: 286 PTAPGLRKPPCFRESASPSPEPWTPGHGACSTSSAAIMATATSRNCDKLKSFHLSP 341
>gi|170014703 SH3-domain binding protein 2 isoform a [Homo sapiens]
Length = 561
Score = 39.7 bits (91), Expect = 0.004
Identities = 32/116 (27%), Positives = 47/116 (40%), Gaps = 14/116 (12%)
Query: 163 PTPQPPPPSPPRGLADRAPRRLNTPPDTLAPRRGVLSGHRLGLQIPRDPDQGSGSLSSQL 222
P P PPP P GL D ++ D L PRR ++P P + S S +
Sbjct: 231 PGPLLPPPPPKHGLPDVGLAAEDSKRDPLCPRRAEPCP-----RVPATPRRMSDPPLSTM 285
Query: 223 PTFPLLRKSGQFRDGSQ---------GGSCKPPRAPLKGSDYTQRLRKKQNHQLYP 269
PT P LRK FR+ + G+C A + + ++ K ++ L P
Sbjct: 286 PTAPGLRKPPCFRESASPSPEPWTPGHGACSTSSAAIMATATSRNCDKLKSFHLSP 341
>gi|56243590 WD repeat domain 33 isoform 1 [Homo sapiens]
Length = 1336
Score = 39.3 bits (90), Expect = 0.005
Identities = 36/143 (25%), Positives = 55/143 (38%), Gaps = 19/143 (13%)
Query: 104 VRSGPGLHGALGPDTGGAKLRVRPRRTPPRDPSLPVLGGAKEPGQVEGQEEEGVVRLLEP 163
++ GPG G GP + G + + PR + G P + +G +G++ + P
Sbjct: 758 IQGGPGSQGIQGPVSQGPLMGLNPRG----------MQGPPGPRENQGPAPQGMI-MGHP 806
Query: 164 TPQPPPPSPPRGLADRAPRRLNTPPDTLAPRRGVLSGHRLGLQIPRDPDQGSGSLSSQLP 223
+ P PP GL P+ + P + + G LG P++ GS S Q P
Sbjct: 807 PQEMRGPHPPGGLLGHGPQEMRGPQEIRGMQGPPPQGSMLG--PPQELRGPPGSQSQQGP 864
Query: 224 TFPLLRKSGQFRDGSQGGSCKPP 246
G QGG PP
Sbjct: 865 ------PQGSLGPPPQGGMQGPP 881
>gi|239746104 PREDICTED: hypothetical protein XP_002344198 [Homo
sapiens]
Length = 398
Score = 38.9 bits (89), Expect = 0.006
Identities = 54/179 (30%), Positives = 68/179 (37%), Gaps = 24/179 (13%)
Query: 86 QPSTPKGRCVWRRAGAGIVRSGPGLHGALGPDTGGAKLRVR-----PRRTPPRDPSLPVL 140
+P TP GR +G VRSG G A GA VR P R PP P P+L
Sbjct: 138 EPKTPPGRS----GPSGGVRSGAGHRAAAAEHQLGAGFSVRNGPGPPARLPPAPPG-PLL 192
Query: 141 GGAKEPGQVEGQEEEGVVRLLEPTPQPPPPSPPRGLADRAPRRLNTPPDTLAPRRGVLSG 200
A+ P + PT +PP P L R + PP + PR VL+
Sbjct: 193 RPARPPRPYFPRPRT------PPTCEPPSRKLPPPLPLCRSRWVLAPPPPVRPRLRVLTP 246
Query: 201 H-RLGLQIP----RDPDQGSGSLSSQ---LPTFPLLRKSGQFRDGSQGGSCKPPRAPLK 251
L +P R P S LS + L T L S + GS S + AP +
Sbjct: 247 PLALRCALPERGSRTPSTRSAVLSGRVAGLGTELTLTPSSRRAHGSHALSSERQAAPTR 305
>gi|54860079 nadrin isoform 1 [Homo sapiens]
Length = 881
Score = 38.9 bits (89), Expect = 0.006
Identities = 57/208 (27%), Positives = 76/208 (36%), Gaps = 29/208 (13%)
Query: 111 HGALGPDTGGAKLRVR-PRRTPPRDPSLPVLGGAKEPGQVEGQEEEGVVR---LLEPTPQ 166
H A GP + V+ P PP+ + P PG GQ G + L P P
Sbjct: 619 HNAAGPSPHTLRRAVKKPAPAPPKPGNPP-------PGHPGGQSSSGTSQHPPSLSPKPP 671
Query: 167 PPPPSPPRGLADRAPRRLNTPPDTLAPRRGVLSGHRLGLQI-----PRDPDQGSGSL--- 218
PSPP + P + + P APRR S +Q P+ P Q + +
Sbjct: 672 TRSPSPPTQHTGQPPGQPSAPSQLSAPRR--YSSSLSPIQAPNHPPPQPPTQATPLMHTK 729
Query: 219 -SSQLPTFPLLRKSGQFRDGSQGGSCKPPRAPLKGSDYTQRLRKKQNHQLYPPSAACLTL 277
+SQ P P+ S G + S PP+ P S T L KQN L P
Sbjct: 730 PNSQGPPNPMALPS---EHGLEQPSHTPPQTPTPPS--TPPL-GKQNPSLPAPQTLAGGN 783
Query: 278 PTRLETHTHGKGVHGARSPVYRSSPELP 305
P + H G P R+ P +P
Sbjct: 784 PETAQPHA-GTLPRPRPVPKPRNRPSVP 810
>gi|54860105 nadrin isoform 2 [Homo sapiens]
Length = 803
Score = 38.9 bits (89), Expect = 0.006
Identities = 57/208 (27%), Positives = 76/208 (36%), Gaps = 29/208 (13%)
Query: 111 HGALGPDTGGAKLRVR-PRRTPPRDPSLPVLGGAKEPGQVEGQEEEGVVR---LLEPTPQ 166
H A GP + V+ P PP+ + P PG GQ G + L P P
Sbjct: 541 HNAAGPSPHTLRRAVKKPAPAPPKPGNPP-------PGHPGGQSSSGTSQHPPSLSPKPP 593
Query: 167 PPPPSPPRGLADRAPRRLNTPPDTLAPRRGVLSGHRLGLQI-----PRDPDQGSGSL--- 218
PSPP + P + + P APRR S +Q P+ P Q + +
Sbjct: 594 TRSPSPPTQHTGQPPGQPSAPSQLSAPRR--YSSSLSPIQAPNHPPPQPPTQATPLMHTK 651
Query: 219 -SSQLPTFPLLRKSGQFRDGSQGGSCKPPRAPLKGSDYTQRLRKKQNHQLYPPSAACLTL 277
+SQ P P+ S G + S PP+ P S T L KQN L P
Sbjct: 652 PNSQGPPNPMALPS---EHGLEQPSHTPPQTPTPPS--TPPL-GKQNPSLPAPQTLAGGN 705
Query: 278 PTRLETHTHGKGVHGARSPVYRSSPELP 305
P + H G P R+ P +P
Sbjct: 706 PETAQPHA-GTLPRPRPVPKPRNRPSVP 732
>gi|14602439 Williams Beuren syndrome chromosome region 14 isoform
delta [Homo sapiens]
Length = 831
Score = 38.5 bits (88), Expect = 0.008
Identities = 31/90 (34%), Positives = 41/90 (45%), Gaps = 5/90 (5%)
Query: 144 KEPGQVEGQEEEGVVRLLEPTPQPPPPSPPRGLADRAPRR--LNTPPDTLAPRRGVLSGH 201
+ PG + E L PTP P PP PP G A AP R L + L+P S
Sbjct: 552 RSPGSPQETVPEFPCTFLPPTPAPTPPRPPPGPATLAPSRPLLVPKAERLSPPAPSGSER 611
Query: 202 RLGLQIPRDPDQGSGSLSSQL-PTFPLLRK 230
RL + P G G+LS ++ P P+L +
Sbjct: 612 RLSGDLSSMP--GPGTLSVRVSPPQPILSR 639
>gi|14602437 Williams Beuren syndrome chromosome region 14 isoform
gamma [Homo sapiens]
Length = 850
Score = 38.5 bits (88), Expect = 0.008
Identities = 31/90 (34%), Positives = 41/90 (45%), Gaps = 5/90 (5%)
Query: 144 KEPGQVEGQEEEGVVRLLEPTPQPPPPSPPRGLADRAPRR--LNTPPDTLAPRRGVLSGH 201
+ PG + E L PTP P PP PP G A AP R L + L+P S
Sbjct: 552 RSPGSPQETVPEFPCTFLPPTPAPTPPRPPPGPATLAPSRPLLVPKAERLSPPAPSGSER 611
Query: 202 RLGLQIPRDPDQGSGSLSSQL-PTFPLLRK 230
RL + P G G+LS ++ P P+L +
Sbjct: 612 RLSGDLSSMP--GPGTLSVRVSPPQPILSR 639
>gi|14602435 Williams Beuren syndrome chromosome region 14 isoform
beta [Homo sapiens]
Length = 833
Score = 38.5 bits (88), Expect = 0.008
Identities = 31/90 (34%), Positives = 41/90 (45%), Gaps = 5/90 (5%)
Query: 144 KEPGQVEGQEEEGVVRLLEPTPQPPPPSPPRGLADRAPRR--LNTPPDTLAPRRGVLSGH 201
+ PG + E L PTP P PP PP G A AP R L + L+P S
Sbjct: 552 RSPGSPQETVPEFPCTFLPPTPAPTPPRPPPGPATLAPSRPLLVPKAERLSPPAPSGSER 611
Query: 202 RLGLQIPRDPDQGSGSLSSQL-PTFPLLRK 230
RL + P G G+LS ++ P P+L +
Sbjct: 612 RLSGDLSSMP--GPGTLSVRVSPPQPILSR 639
>gi|14602433 Williams Beuren syndrome chromosome region 14 isoform
alpha [Homo sapiens]
Length = 852
Score = 38.5 bits (88), Expect = 0.008
Identities = 31/90 (34%), Positives = 41/90 (45%), Gaps = 5/90 (5%)
Query: 144 KEPGQVEGQEEEGVVRLLEPTPQPPPPSPPRGLADRAPRR--LNTPPDTLAPRRGVLSGH 201
+ PG + E L PTP P PP PP G A AP R L + L+P S
Sbjct: 552 RSPGSPQETVPEFPCTFLPPTPAPTPPRPPPGPATLAPSRPLLVPKAERLSPPAPSGSER 611
Query: 202 RLGLQIPRDPDQGSGSLSSQL-PTFPLLRK 230
RL + P G G+LS ++ P P+L +
Sbjct: 612 RLSGDLSSMP--GPGTLSVRVSPPQPILSR 639
>gi|210031233 PR domain containing 6 [Homo sapiens]
Length = 595
Score = 38.5 bits (88), Expect = 0.008
Identities = 29/85 (34%), Positives = 36/85 (42%), Gaps = 12/85 (14%)
Query: 115 GPDTGGAKLRVRPRRTPPRDPSLPVLGGAKEPGQVEGQEEEGVVRLLEPTPQPPPPSPPR 174
G G A L+V P P GGA G ++G G++ +P PPPP P
Sbjct: 5 GDPGGSAFLKVDPAYLQHWQQLFPH-GGA---GPLKGSGAAGLLSAPQPLQPPPPPPP-- 58
Query: 175 GLADRAPRRLNTPPDTLAPRRGVLS 199
P R PPD+L PR LS
Sbjct: 59 ------PERAEPPPDSLRPRPASLS 77
>gi|38327037 hyperpolarization activated cyclic nucleotide-gated
potassium channel 3 [Homo sapiens]
Length = 774
Score = 38.5 bits (88), Expect = 0.008
Identities = 38/111 (34%), Positives = 45/111 (40%), Gaps = 17/111 (15%)
Query: 78 GRWAVFHHQPSTPKGRCVWRRAGAGIVRSGPGLHGALGPDTGGAKLRVRPRRTP--PRDP 135
G WA P+ P R A + R+G LGP GG R+ PR P P
Sbjct: 663 GPWASTSRLPAPPA-----RTLHASLSRAGRSQVSLLGPPPGGGGRRLGPRGRPLSASQP 717
Query: 136 SLPVLG-GAKEPGQVEGQEE----EGVVRLLEPTPQPP-PPSP----PRGL 176
SLP G PG+ E G++ T QPP PP P PRGL
Sbjct: 718 SLPQRATGDGSPGRKGSGSERLPPSGLLAKPPRTAQPPRPPVPEPATPRGL 768
>gi|165905613 ring finger and KH domain containing 1 [Homo sapiens]
Length = 651
Score = 38.1 bits (87), Expect = 0.011
Identities = 30/90 (33%), Positives = 34/90 (37%), Gaps = 27/90 (30%)
Query: 106 SGPGLHGALGPDTGGAKLRVRPRRTPPRDPSL---PVLGGAKEPGQVEGQEEEGVVRLLE 162
+G G A G D G A P PP P P L A PG + LL+
Sbjct: 83 AGDGAAAAGGADGGAA-----PEPVPPDGPEAGAPPTLAPAVAPGSLP---------LLD 128
Query: 163 PTPQPPPPSPPRGLADRAPRRLNTPPDTLA 192
P PPPP PPR +PPD A
Sbjct: 129 PNASPPPPPPPR----------PSPPDVFA 148
>gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo
sapiens]
Length = 316
Score = 37.7 bits (86), Expect = 0.014
Identities = 45/183 (24%), Positives = 63/183 (34%), Gaps = 26/183 (14%)
Query: 22 IQDEELRGEDAMSR--EQGTISGKMRVPWEDVVYGGVPHTPGTRELNTRCLKFEISARGR 79
+ D LR M R +GT +R ++G V H +REL R + + R
Sbjct: 1 MSDASLRSTSTMERLVARGTFPVLVRTSACRSLFGPVDHEELSRELQARLAELNAEDQNR 60
Query: 80 WAVFHHQ--PSTPKGRCVWRRAGAGIVRSGPGLHGALGPDTGGAKLRVRPRR-------T 130
W Q P GR W + V P + G +L + PR +
Sbjct: 61 WDYDFQQDMPLRGPGRLQWTEVDSDSV---PAFYRET-VQVGRCRLLLAPRPVAVAVAVS 116
Query: 131 PPRDPSLPVLGGAKEPGQVEGQEEEGVVRLLEPTPQPPPPSPPRGLADRAPRRLNTPPDT 190
PP +P+ L G +E + L P P P S P + AP P
Sbjct: 117 PPLEPAAESLDGLEEAPE-----------QLPSVPVPAPASTPPPVPVLAPAPAPAPAPV 165
Query: 191 LAP 193
AP
Sbjct: 166 AAP 168
>gi|169207312 PREDICTED: hypothetical protein [Homo sapiens]
Length = 414
Score = 37.7 bits (86), Expect = 0.014
Identities = 67/261 (25%), Positives = 94/261 (36%), Gaps = 48/261 (18%)
Query: 85 HQPSTPKGRCVWRRAGA------GIVRSGPGLHGALGPDTGGAKLRVRPR-----RTPPR 133
H P +G WRR A + L A G A+ PR R PPR
Sbjct: 63 HSPDPGEGCEAWRRLSADRWPRPASLSPRAALASAPGQKPQPARQAQLPRPVSGVRPPPR 122
Query: 134 DPSLPVLGGAKEPGQVEGQEEEGV-VRLLEPT-PQPPPPSP-----PRGLADRAPRRLNT 186
+G ++ PG+ G +RL+ P+ P+PP P P GL R P T
Sbjct: 123 GR----VGLSQAPGRPLGACARAKGIRLVNPSPPRPPEPIPASAAVTSGLTARGPNTSAT 178
Query: 187 PPDTLAPRRGVLSGHRLGLQIPRDPDQGSGSLSSQLPTFPLLRKSGQFRDGSQGGSCKPP 246
P P++G S R IP+D + + + P P R GS G S P
Sbjct: 179 P----GPQKGRGSAERTN-HIPKDKQRVAAPPPPERPRVPFCR-------GSSGLSVPTP 226
Query: 247 RAPLKGSDYTQRLRKKQNHQLYPPSAACL-----TLPTRLETHTHGKGV----HGARSPV 297
G R +K + P +++ L T P + +H + R+P
Sbjct: 227 PEHAGG-----RRKKFTRTRPLPRTSSFLSEVPSTRPLCATSSSHSAPLPFFWSPLRNPS 281
Query: 298 YRSSPELPSFHLHAGSPARLD 318
R +P L SP R D
Sbjct: 282 PRPAPACGELRLGRLSPPRAD 302
>gi|239750650 PREDICTED: hypothetical protein [Homo sapiens]
Length = 414
Score = 37.7 bits (86), Expect = 0.014
Identities = 67/261 (25%), Positives = 94/261 (36%), Gaps = 48/261 (18%)
Query: 85 HQPSTPKGRCVWRRAGA------GIVRSGPGLHGALGPDTGGAKLRVRPR-----RTPPR 133
H P +G WRR A + L A G A+ PR R PPR
Sbjct: 63 HSPDPGEGCEAWRRLSADRWPRPASLSPRAALASAPGQKPQPARQAQLPRPVSGVRPPPR 122
Query: 134 DPSLPVLGGAKEPGQVEGQEEEGV-VRLLEPT-PQPPPPSP-----PRGLADRAPRRLNT 186
+G ++ PG+ G +RL+ P+ P+PP P P GL R P T
Sbjct: 123 GR----VGLSQAPGRPLGACARAKGIRLVNPSPPRPPEPIPASAAVTSGLTARGPNTSAT 178
Query: 187 PPDTLAPRRGVLSGHRLGLQIPRDPDQGSGSLSSQLPTFPLLRKSGQFRDGSQGGSCKPP 246
P P++G S R IP+D + + + P P R GS G S P
Sbjct: 179 P----GPQKGRGSAERTN-HIPKDKQRVAAPPPPERPRVPFCR-------GSSGLSVPTP 226
Query: 247 RAPLKGSDYTQRLRKKQNHQLYPPSAACL-----TLPTRLETHTHGKGV----HGARSPV 297
G R +K + P +++ L T P + +H + R+P
Sbjct: 227 PEHAGG-----RRKKFTRTRPLPRTSSFLSEVPSTRPLCATSSSHSAPLPFFWSPLRNPS 281
Query: 298 YRSSPELPSFHLHAGSPARLD 318
R +P L SP R D
Sbjct: 282 PRPAPACGELRLGRLSPPRAD 302
>gi|89037350 PREDICTED: hypothetical protein [Homo sapiens]
Length = 414
Score = 37.7 bits (86), Expect = 0.014
Identities = 67/261 (25%), Positives = 94/261 (36%), Gaps = 48/261 (18%)
Query: 85 HQPSTPKGRCVWRRAGA------GIVRSGPGLHGALGPDTGGAKLRVRPR-----RTPPR 133
H P +G WRR A + L A G A+ PR R PPR
Sbjct: 63 HSPDPGEGCEAWRRLSADRWPRPASLSPRAALASAPGQKPQPARQAQLPRPVSGVRPPPR 122
Query: 134 DPSLPVLGGAKEPGQVEGQEEEGV-VRLLEPT-PQPPPPSP-----PRGLADRAPRRLNT 186
+G ++ PG+ G +RL+ P+ P+PP P P GL R P T
Sbjct: 123 GR----VGLSQAPGRPLGACARAKGIRLVNPSPPRPPEPIPASAAVTSGLTARGPNTSAT 178
Query: 187 PPDTLAPRRGVLSGHRLGLQIPRDPDQGSGSLSSQLPTFPLLRKSGQFRDGSQGGSCKPP 246
P P++G S R IP+D + + + P P R GS G S P
Sbjct: 179 P----GPQKGRGSAERTN-HIPKDKQRVAAPPPPERPRVPFCR-------GSSGLSVPTP 226
Query: 247 RAPLKGSDYTQRLRKKQNHQLYPPSAACL-----TLPTRLETHTHGKGV----HGARSPV 297
G R +K + P +++ L T P + +H + R+P
Sbjct: 227 PEHAGG-----RRKKFTRTRPLPRTSSFLSEVPSTRPLCATSSSHSAPLPFFWSPLRNPS 281
Query: 298 YRSSPELPSFHLHAGSPARLD 318
R +P L SP R D
Sbjct: 282 PRPAPACGELRLGRLSPPRAD 302
>gi|41281683 disabled homolog 2 interacting protein isoform 2 [Homo
sapiens]
Length = 1065
Score = 37.7 bits (86), Expect = 0.014
Identities = 36/106 (33%), Positives = 43/106 (40%), Gaps = 24/106 (22%)
Query: 118 TGGAKLRVRPRRTPPRDPSLPVLGGAKEPGQVEGQEEEGVVRLLEPTPQPPPPSPPRGLA 177
T +L RP R SL GG V Q G R ++ P PPPP PP
Sbjct: 753 TAAEELARRPGELARRQMSLTEKGGQPT---VPRQNSAGPQRRIDQPPPPPPPPPP---- 805
Query: 178 DRAPRRLNTPPDTLAPRRGVLSGHRLGLQIPRDPDQGSGSLSSQLP 223
APR TPP+ L+ LQ PR SG+L+S P
Sbjct: 806 --APRG-RTPPNLLST-----------LQYPR---PSSGTLASASP 834
>gi|94967023 disabled homolog 2 interacting protein isoform 1 [Homo
sapiens]
Length = 1132
Score = 37.7 bits (86), Expect = 0.014
Identities = 36/106 (33%), Positives = 43/106 (40%), Gaps = 24/106 (22%)
Query: 118 TGGAKLRVRPRRTPPRDPSLPVLGGAKEPGQVEGQEEEGVVRLLEPTPQPPPPSPPRGLA 177
T +L RP R SL GG V Q G R ++ P PPPP PP
Sbjct: 849 TAAEELARRPGELARRQMSLTEKGGQPT---VPRQNSAGPQRRIDQPPPPPPPPPP---- 901
Query: 178 DRAPRRLNTPPDTLAPRRGVLSGHRLGLQIPRDPDQGSGSLSSQLP 223
APR TPP+ L+ LQ PR SG+L+S P
Sbjct: 902 --APRG-RTPPNLLST-----------LQYPR---PSSGTLASASP 930
>gi|4885407 hyperpolarization activated cyclic nucleotide-gated
potassium channel 4 [Homo sapiens]
Length = 1203
Score = 37.0 bits (84), Expect = 0.024
Identities = 48/180 (26%), Positives = 58/180 (32%), Gaps = 50/180 (27%)
Query: 130 TPPRDPSLPVL----------------GGAKEPGQVEGQEE------------EGVVRLL 161
TPPR P P L GG PG G G + LL
Sbjct: 996 TPPRQPEPPSLVAGASGGASPVGFTPRGGLSPPGHSPGPPRTFPSAPPRASGSHGSL-LL 1054
Query: 162 EPTPQPPPPSPPRGLADRAPRRLNTPPDTLAPRRGVLSGHRLGLQIPRDPDQGSGSLSSQ 221
P PPPP + P+R TPP L P R + P P G+ +L
Sbjct: 1055 PPASSPPPP--------QVPQRRGTPP--LTPGRLTQDLKLISASQPALPQDGAQTLRRA 1104
Query: 222 LP--------TFPLLRKSGQFRDGS-QGGSCKPPRAPLKG--SDYTQRLRKKQNHQLYPP 270
P FPL ++G GS G PP P + RK + L PP
Sbjct: 1105 SPHSSGESMAAFPLFPRAGGGSGGSGSSGGLGPPGRPYGAIPGQHVTLPRKTSSGSLPPP 1164
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.137 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,145,759
Number of Sequences: 37866
Number of extensions: 1187295
Number of successful extensions: 8911
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 119
Number of HSP's successfully gapped in prelim test: 564
Number of HSP's that attempted gapping in prelim test: 6572
Number of HSP's gapped (non-prelim): 2104
length of query: 327
length of database: 18,247,518
effective HSP length: 103
effective length of query: 224
effective length of database: 14,347,320
effective search space: 3213799680
effective search space used: 3213799680
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.