Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239757214
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239757214 PREDICTED: hypothetical protein [Homo sapiens]
(165 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239757214 PREDICTED: hypothetical protein [Homo sapiens] 341 1e-94
gi|169214271 PREDICTED: hypothetical protein [Homo sapiens] 341 1e-94
gi|169213616 PREDICTED: hypothetical protein [Homo sapiens] 341 1e-94
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 44 8e-05
gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens] 42 2e-04
gi|61743942 abl-interactor 1 isoform a [Homo sapiens] 38 0.003
gi|209413756 synapsin III isoform IIIg [Homo sapiens] 37 0.010
gi|209413752 synapsin III isoform IIIa [Homo sapiens] 37 0.010
gi|24497501 forkhead box A1 [Homo sapiens] 36 0.013
gi|20162554 Kruppel-like factor 14 [Homo sapiens] 36 0.013
gi|6912492 mitogen-activated protein kinase 8 interacting protei... 35 0.030
gi|7706537 mitogen-activated protein kinase 8 interacting protei... 35 0.030
gi|28559039 mediator complex subunit 1 [Homo sapiens] 35 0.039
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 35 0.039
gi|219804203 rabphilin 3A homolog isoform 1 [Homo sapiens] 35 0.039
gi|45267837 rabphilin 3A homolog isoform 2 [Homo sapiens] 35 0.039
gi|154146231 DMRT-like family A2 [Homo sapiens] 35 0.039
gi|197927236 hypothetical protein LOC729627 [Homo sapiens] 35 0.039
gi|38569493 potassium voltage-gated channel, subfamily H (eag-re... 34 0.050
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 34 0.050
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 34 0.050
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 34 0.050
gi|238776840 patatin-like phospholipase domain containing 1 isof... 34 0.066
gi|224589138 patatin-like phospholipase domain containing 1 isof... 34 0.066
gi|224593249 patatin-like phospholipase domain containing 1 isof... 34 0.066
gi|239756116 PREDICTED: hypothetical protein [Homo sapiens] 33 0.086
gi|239750586 PREDICTED: hypothetical protein XP_002347439 [Homo ... 33 0.086
gi|239744954 PREDICTED: hypothetical protein XP_002343343 [Homo ... 33 0.086
gi|239744883 PREDICTED: hypothetical protein XP_002344274 [Homo ... 33 0.086
gi|25121980 dispatched B [Homo sapiens] 33 0.086
>gi|239757214 PREDICTED: hypothetical protein [Homo sapiens]
Length = 165
Score = 341 bits (875), Expect = 1e-94
Identities = 165/165 (100%), Positives = 165/165 (100%)
Query: 1 MRKIQAVKFSFPRSLSCPLVDEKDDRERRRGQAAARPGGCEASQGKLSRQLLPRPLWEEG 60
MRKIQAVKFSFPRSLSCPLVDEKDDRERRRGQAAARPGGCEASQGKLSRQLLPRPLWEEG
Sbjct: 1 MRKIQAVKFSFPRSLSCPLVDEKDDRERRRGQAAARPGGCEASQGKLSRQLLPRPLWEEG 60
Query: 61 RGRPLQRDGSGGAAGSRDNGSSFTGGPERQLTDSCPGPSCATEPPDLGASEPRAQELDPV 120
RGRPLQRDGSGGAAGSRDNGSSFTGGPERQLTDSCPGPSCATEPPDLGASEPRAQELDPV
Sbjct: 61 RGRPLQRDGSGGAAGSRDNGSSFTGGPERQLTDSCPGPSCATEPPDLGASEPRAQELDPV 120
Query: 121 PGSPASQLLLPHPTAPLSSQSGRGSHQAFPSDPLQMNQDLSEGTK 165
PGSPASQLLLPHPTAPLSSQSGRGSHQAFPSDPLQMNQDLSEGTK
Sbjct: 121 PGSPASQLLLPHPTAPLSSQSGRGSHQAFPSDPLQMNQDLSEGTK 165
>gi|169214271 PREDICTED: hypothetical protein [Homo sapiens]
Length = 165
Score = 341 bits (875), Expect = 1e-94
Identities = 165/165 (100%), Positives = 165/165 (100%)
Query: 1 MRKIQAVKFSFPRSLSCPLVDEKDDRERRRGQAAARPGGCEASQGKLSRQLLPRPLWEEG 60
MRKIQAVKFSFPRSLSCPLVDEKDDRERRRGQAAARPGGCEASQGKLSRQLLPRPLWEEG
Sbjct: 1 MRKIQAVKFSFPRSLSCPLVDEKDDRERRRGQAAARPGGCEASQGKLSRQLLPRPLWEEG 60
Query: 61 RGRPLQRDGSGGAAGSRDNGSSFTGGPERQLTDSCPGPSCATEPPDLGASEPRAQELDPV 120
RGRPLQRDGSGGAAGSRDNGSSFTGGPERQLTDSCPGPSCATEPPDLGASEPRAQELDPV
Sbjct: 61 RGRPLQRDGSGGAAGSRDNGSSFTGGPERQLTDSCPGPSCATEPPDLGASEPRAQELDPV 120
Query: 121 PGSPASQLLLPHPTAPLSSQSGRGSHQAFPSDPLQMNQDLSEGTK 165
PGSPASQLLLPHPTAPLSSQSGRGSHQAFPSDPLQMNQDLSEGTK
Sbjct: 121 PGSPASQLLLPHPTAPLSSQSGRGSHQAFPSDPLQMNQDLSEGTK 165
>gi|169213616 PREDICTED: hypothetical protein [Homo sapiens]
Length = 165
Score = 341 bits (875), Expect = 1e-94
Identities = 165/165 (100%), Positives = 165/165 (100%)
Query: 1 MRKIQAVKFSFPRSLSCPLVDEKDDRERRRGQAAARPGGCEASQGKLSRQLLPRPLWEEG 60
MRKIQAVKFSFPRSLSCPLVDEKDDRERRRGQAAARPGGCEASQGKLSRQLLPRPLWEEG
Sbjct: 1 MRKIQAVKFSFPRSLSCPLVDEKDDRERRRGQAAARPGGCEASQGKLSRQLLPRPLWEEG 60
Query: 61 RGRPLQRDGSGGAAGSRDNGSSFTGGPERQLTDSCPGPSCATEPPDLGASEPRAQELDPV 120
RGRPLQRDGSGGAAGSRDNGSSFTGGPERQLTDSCPGPSCATEPPDLGASEPRAQELDPV
Sbjct: 61 RGRPLQRDGSGGAAGSRDNGSSFTGGPERQLTDSCPGPSCATEPPDLGASEPRAQELDPV 120
Query: 121 PGSPASQLLLPHPTAPLSSQSGRGSHQAFPSDPLQMNQDLSEGTK 165
PGSPASQLLLPHPTAPLSSQSGRGSHQAFPSDPLQMNQDLSEGTK
Sbjct: 121 PGSPASQLLLPHPTAPLSSQSGRGSHQAFPSDPLQMNQDLSEGTK 165
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 43.5 bits (101), Expect = 8e-05
Identities = 41/141 (29%), Positives = 54/141 (38%), Gaps = 20/141 (14%)
Query: 12 PRSLSCPLVDEKDDRERRRGQAAARPG---GCEASQGKLSRQLLPRPLWEEGRGRPLQRD 68
PR S L + + G+ A PG G E G ++ RP R RP
Sbjct: 416 PRGSSRSLSRARSSSDSGSGRGAPGPGPEPGSERGHGGHGKRAKERP----PRARPASTS 471
Query: 69 GSGGAAGSRDNGSSFTGGPERQLTDSCPGPSCATEPPDLGASEPRAQELDPVPGSPASQL 128
S GA G R GGPE + + PGP + S+ R++ + P SP+
Sbjct: 472 PSPGAHGRR-------GGPEGKSSSRSPGPHPRSWSSSRSPSKSRSRSAEKRPHSPSRS- 523
Query: 129 LLPHPTAPLSSQ---SGRGSH 146
P P PLS GR H
Sbjct: 524 --PSPKKPLSRDKDGEGRARH 542
Score = 31.2 bits (69), Expect = 0.43
Identities = 37/128 (28%), Positives = 46/128 (35%), Gaps = 21/128 (16%)
Query: 24 DDRERRRGQAAARPGGCEASQGKLSRQLLPRPLWEEGRGRPLQRDGSGGAAGSRDNGSSF 83
D R R R G + + S P P G G P + GSG +G+
Sbjct: 271 DSRSPSRLSPKHRDEGRKTGSQRSSGSRSPSPSGGSGWGSPQRNGGSGQRSGAH------ 324
Query: 84 TGGPERQLTDSCPGPSCATEPPDLGAS-EPRAQE--LDPVPGSPASQLLLPHPTAPLSSQ 140
GG P A PPD +S PR ++ P PA P P + SSQ
Sbjct: 325 -GG----------RPGSAHSPPDKPSSPSPRVRDKAAAAAPTPPARGKESPSPRSAPSSQ 373
Query: 141 SGRGSHQA 148
GRG A
Sbjct: 374 -GRGGRAA 380
>gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens]
Length = 2944
Score = 42.0 bits (97), Expect = 2e-04
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 55 PLWEEG-RGRPLQ--RDGSGGAAGSR-DNGSSFTGGPERQLTDSCPGPSCATEPPDLGAS 110
P+ E+G +G P + R+GS G++G + D G GP +L D+ PG EP D G
Sbjct: 1668 PVGEKGDQGDPGEDGRNGSPGSSGPKGDRGEPGPPGPPGRLVDTGPGAREKGEPGDRGQE 1727
Query: 111 EPRAQELDP-VPGSPASQ 127
PR + DP +PG+P +
Sbjct: 1728 GPRGPKGDPGLPGAPGER 1745
Score = 28.1 bits (61), Expect = 3.6
Identities = 39/143 (27%), Positives = 50/143 (34%), Gaps = 25/143 (17%)
Query: 37 PGGCEASQGKLSRQLLPRPLWEEGRGRPLQRDGSGGAAGSRDN----GSSFTGGPERQLT 92
P G QG LP + E G+ RDG+ G G R + GS GP
Sbjct: 2234 PSGLVGPQGSPG---LPGQVGETGKPGAPGRDGASGKDGDRGSPGVPGSPGLPGPVGPKG 2290
Query: 93 DSCPGPSCATEPPDLGASEPRAQELDPVPGSPASQLL----------LPHPTAPLSSQSG 142
+ PGP+ A P P A+ PG A L+ LP P + G
Sbjct: 2291 E--PGPTGA--PGQAVVGLPGAKGEKGAPGGLAGDLVGEPGAKGDRGLPGP----RGEKG 2342
Query: 143 RGSHQAFPSDPLQMNQDLSEGTK 165
P DP + Q + G K
Sbjct: 2343 EAGRAGEPGDPGEDGQKGAPGPK 2365
>gi|61743942 abl-interactor 1 isoform a [Homo sapiens]
Length = 508
Score = 38.1 bits (87), Expect = 0.003
Identities = 35/88 (39%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 63 RPLQRDGSGGAAGSRDN-GSSFTGGPERQLTDSCP--GPSCATEPPDLGASEPRAQELDP 119
RP GS G +GSR+N GSS G P T S P GP + PP GA P A L P
Sbjct: 235 RPRTHSGSSGGSGSRENSGSSSIGIPIAVPTPSPPTIGPENISVPPPSGA--PPAPPLAP 292
Query: 120 VPGSPASQLLLPHPTAPLSSQSGRGSHQ 147
+ P S ++ +AP SQ G + Q
Sbjct: 293 L--LPVSTVIAAPGSAP-GSQYGTMTRQ 317
>gi|209413756 synapsin III isoform IIIg [Homo sapiens]
Length = 579
Score = 36.6 bits (83), Expect = 0.010
Identities = 26/70 (37%), Positives = 28/70 (40%), Gaps = 10/70 (14%)
Query: 94 SCPGPSCATEPPDLGASEPRA-------QELDPVP---GSPASQLLLPHPTAPLSSQSGR 143
S P A P LG +PR Q P P GSP+ Q L P PLS QSG
Sbjct: 415 SAKSPGQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQRSGSPSQQRLSPQGQQPLSPQSGS 474
Query: 144 GSHQAFPSDP 153
Q P P
Sbjct: 475 PQQQRSPGSP 484
>gi|209413752 synapsin III isoform IIIa [Homo sapiens]
Length = 580
Score = 36.6 bits (83), Expect = 0.010
Identities = 26/70 (37%), Positives = 28/70 (40%), Gaps = 10/70 (14%)
Query: 94 SCPGPSCATEPPDLGASEPRA-------QELDPVP---GSPASQLLLPHPTAPLSSQSGR 143
S P A P LG +PR Q P P GSP+ Q L P PLS QSG
Sbjct: 416 SAKSPGQAQLGPQLGQPQPRPPPQGGPRQAQSPQPQRSGSPSQQRLSPQGQQPLSPQSGS 475
Query: 144 GSHQAFPSDP 153
Q P P
Sbjct: 476 PQQQRSPGSP 485
>gi|24497501 forkhead box A1 [Homo sapiens]
Length = 472
Score = 36.2 bits (82), Expect = 0.013
Identities = 25/71 (35%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
Query: 66 QRDGSGGAAGSRDNGSSFTGGPERQLTDSCPGPSCATEPPDLGASEPRAQ-ELDPVPGSP 124
++ G+GG GS GS GGPE + S A P G Q E P PG
Sbjct: 270 KQPGAGGGGGSGSGGSGAKGGPESRKDPSGASNPSADSPLHRGVHGKTGQLEGAPAPGPA 329
Query: 125 ASQLLLPHPTA 135
AS L H A
Sbjct: 330 ASPQTLDHSGA 340
>gi|20162554 Kruppel-like factor 14 [Homo sapiens]
Length = 323
Score = 36.2 bits (82), Expect = 0.013
Identities = 30/83 (36%), Positives = 34/83 (40%), Gaps = 10/83 (12%)
Query: 63 RPLQRDGSGGAAGSRDNGSSFTGGPERQLTDSCPGPSCATEPPDLGASEPRAQELDPVPG 122
RP +G+GGAAGS + PE L PGPS P L P+ P G
Sbjct: 28 RPPDPEGAGGAAGSEVGAAH----PESALPG--PGPSGPASVPQL----PQVPAPSPGAG 77
Query: 123 SPASQLLLPHPTAPLSSQSGRGS 145
A LL A L SG GS
Sbjct: 78 GAAPHLLAASVWADLRGSSGEGS 100
>gi|6912492 mitogen-activated protein kinase 8 interacting protein 2
isoform 1 [Homo sapiens]
Length = 824
Score = 35.0 bits (79), Expect = 0.030
Identities = 44/155 (28%), Positives = 59/155 (38%), Gaps = 30/155 (19%)
Query: 21 DEKDDRERRRGQAAARPGGCEASQGKLSRQLLPRPLWEE-GRGRPLQ-RDGSGGAAGSRD 78
DE+++ E G + GG S+ L+P P EE + RP R + GA S +
Sbjct: 94 DEEEEEEEEEGDGEGQEGGDPGSEAPAPGPLIPSPSVEEPHKHRPTTLRLTTLGAQDSLN 153
Query: 79 NGSSF------------TGGPERQLTDSCPGPSCATEPPDLGASEPRAQELD-------- 118
N F P + PGP AT+ GA P D
Sbjct: 154 NNGGFDLVRPASWQETALCSPAPEALRELPGPLPATDTGPGGAQSPVRPGCDCEGNRPAE 213
Query: 119 -PVPG--SPASQLLLPHPTAPLSSQS--GRGSHQA 148
P PG SP+S P A L S+S GRG ++
Sbjct: 214 PPAPGGTSPSSD---PGIEADLRSRSSGGRGGRRS 245
>gi|7706537 mitogen-activated protein kinase 8 interacting protein 2
isoform 2 [Homo sapiens]
Length = 797
Score = 35.0 bits (79), Expect = 0.030
Identities = 44/155 (28%), Positives = 59/155 (38%), Gaps = 30/155 (19%)
Query: 21 DEKDDRERRRGQAAARPGGCEASQGKLSRQLLPRPLWEE-GRGRPLQ-RDGSGGAAGSRD 78
DE+++ E G + GG S+ L+P P EE + RP R + GA S +
Sbjct: 67 DEEEEEEEEEGDGEGQEGGDPGSEAPAPGPLIPSPSVEEPHKHRPTTLRLTTLGAQDSLN 126
Query: 79 NGSSF------------TGGPERQLTDSCPGPSCATEPPDLGASEPRAQELD-------- 118
N F P + PGP AT+ GA P D
Sbjct: 127 NNGGFDLVRPASWQETALCSPAPEALRELPGPLPATDTGPGGAQSPVRPGCDCEGNRPAE 186
Query: 119 -PVPG--SPASQLLLPHPTAPLSSQS--GRGSHQA 148
P PG SP+S P A L S+S GRG ++
Sbjct: 187 PPAPGGTSPSSD---PGIEADLRSRSSGGRGGRRS 218
>gi|28559039 mediator complex subunit 1 [Homo sapiens]
Length = 1581
Score = 34.7 bits (78), Expect = 0.039
Identities = 40/138 (28%), Positives = 55/138 (39%), Gaps = 23/138 (16%)
Query: 42 ASQGKLSRQLLPRPLWEEGRGRPLQRDGSGGAAGSR-------DNGSSFT-----GGPER 89
+S KLS + G + SGG GS +GSS T G P
Sbjct: 1122 SSSSKLSSSMYSSQ-GSSGSSQSKNSSQSGGKPGSSPITKHGLSSGSSSTKMKPQGKPSS 1180
Query: 90 QLTDSCPGPSCA---TEPPDLGASEPRAQELDPVPGSPASQLLLPHPTAPLSSQSGRGSH 146
+ S P+ + + PP G S+ A + PVPG+P S +P+SS SG GSH
Sbjct: 1181 LMNPSLSKPNISPSHSRPP--GGSDKLASPMKPVPGTPPSS----KAKSPISSGSG-GSH 1233
Query: 147 QAFPSDPLQMNQDLSEGT 164
+ S M G+
Sbjct: 1234 MSGTSSSSGMKSSSGLGS 1251
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 34.7 bits (78), Expect = 0.039
Identities = 42/144 (29%), Positives = 56/144 (38%), Gaps = 30/144 (20%)
Query: 31 GQAAARPGGCEASQGKLSRQ---LLPRPLWEE--GRGRPLQRDGSGGAAGSRDNGSSFTG 85
G A PG S+G LS++ L R + G R +R G GG AGS + S G
Sbjct: 1357 GGGGAVPGISAMSRGDLSQRAKDLSKRSFSSQRPGMERQNRRPGPGGKAGSSGSSSGGGG 1416
Query: 86 G-------PERQLTDSCPGPSCATEPPDLGASEPRAQELDPVPGSPASQLLLPHPTAPLS 138
G P R S P P + PP+ + PG LP P P S
Sbjct: 1417 GGPGGRTGPGRGDKRSWPSPKNRSRPPE-----------ERPPG-------LPLPPPPPS 1458
Query: 139 SQSGRGSHQAFPSDPLQMNQDLSE 162
S + Q S+P + Q L++
Sbjct: 1459 SSAVFRLDQVIHSNPAGIQQALAQ 1482
Score = 28.9 bits (63), Expect = 2.1
Identities = 34/161 (21%), Positives = 57/161 (35%), Gaps = 17/161 (10%)
Query: 18 PLVDEKDDRERRRGQAAARPGGCEASQGKLSRQLLPRPLWEEGRGRPLQR----DGSGGA 73
P +++D+ R+R + ++ + + R+ R + EE R ++ D GA
Sbjct: 440 PAPEDEDEAWRQRRKQSSSEISLAVERARRRREEEERRMQEERRAACAEKLKRLDEKFGA 499
Query: 74 AGSRDNGSSFTGGPERQLTDSCPGPSCATE------PPDLGASEPRAQELDPVPGSPASQ 127
R P + P P+ E PP A P + +P PA
Sbjct: 500 PDKRLKAEP--AAPPAAPSTPAPPPAVPKELPAPPAPPPASAPTPETEPEEPAQAPPAQS 557
Query: 128 LLLPHPTAPLSSQSGRGSHQ-----AFPSDPLQMNQDLSEG 163
P A + SG GS +F + P++ EG
Sbjct: 558 TPTPGVAAAPTLVSGGGSTSSTSSGSFEASPVEPQLPSKEG 598
>gi|219804203 rabphilin 3A homolog isoform 1 [Homo sapiens]
Length = 694
Score = 34.7 bits (78), Expect = 0.039
Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 8/90 (8%)
Query: 37 PGGCEASQGKLSRQLLPRPLW---EEGRGRPLQRDGSGG-----AAGSRDNGSSFTGGPE 88
PGG G R +P + G P + + +GG A G+R++ S GP
Sbjct: 297 PGGSRPGPGPAGRFPDQKPEVAPSDPGTTAPPREERTGGVGGYPAVGAREDRMSHPSGPY 356
Query: 89 RQLTDSCPGPSCATEPPDLGASEPRAQELD 118
Q + + P P+ A +PP E A D
Sbjct: 357 SQASAAAPQPAAARQPPPPEEEEEEANSYD 386
>gi|45267837 rabphilin 3A homolog isoform 2 [Homo sapiens]
Length = 690
Score = 34.7 bits (78), Expect = 0.039
Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 8/90 (8%)
Query: 37 PGGCEASQGKLSRQLLPRPLW---EEGRGRPLQRDGSGG-----AAGSRDNGSSFTGGPE 88
PGG G R +P + G P + + +GG A G+R++ S GP
Sbjct: 293 PGGSRPGPGPAGRFPDQKPEVAPSDPGTTAPPREERTGGVGGYPAVGAREDRMSHPSGPY 352
Query: 89 RQLTDSCPGPSCATEPPDLGASEPRAQELD 118
Q + + P P+ A +PP E A D
Sbjct: 353 SQASAAAPQPAAARQPPPPEEEEEEANSYD 382
>gi|154146231 DMRT-like family A2 [Homo sapiens]
Length = 542
Score = 34.7 bits (78), Expect = 0.039
Identities = 43/151 (28%), Positives = 55/151 (36%), Gaps = 34/151 (22%)
Query: 31 GQAAARPGGCEASQGKLSRQLLPRPLWEEGRG--------RPLQRDGSG----------- 71
G AA GG EA K L P+ L + GR +PL DG+
Sbjct: 177 GGGAAGAGGSEAKLQKFD--LFPKTLLQAGRPGSPLPPPVKPLSPDGADSGPGTSSPEVR 234
Query: 72 -GAAGSRDNGSSFTGGP----ERQLTDSCP---GPSCATEPPDLGASEPRAQELDPVPGS 123
G+ +G SF+G P ++ SCP GP E G++ P E GS
Sbjct: 235 PGSGSENGDGESFSGSPLARASKEAGGSCPGSAGPGGGGEEDSPGSASPLGSE----SGS 290
Query: 124 PASQLLLPHPTAPLSSQSGRGSHQAFPSDPL 154
A + AP G G Q P D L
Sbjct: 291 EADKEEGEAAPAP-GLGGGSGPRQRTPLDIL 320
>gi|197927236 hypothetical protein LOC729627 [Homo sapiens]
Length = 266
Score = 34.7 bits (78), Expect = 0.039
Identities = 28/94 (29%), Positives = 38/94 (40%), Gaps = 10/94 (10%)
Query: 65 LQRDGSGGAAG-----SRDNGSSFTGGPERQLTDSCPGPSCATEPPDLGASEPRAQELDP 119
LQ D + G+A +R S + GP + P PS P +P + L+P
Sbjct: 167 LQMDSAAGSAAGLYSSARSMFSPYREGPIPEPCALAPNPSSEGHSPG-PFFDPEFRLLEP 225
Query: 120 VPGSPASQLLLPHPTAPLSSQSGRGSHQAFPSDP 153
VP SP L P P +P G +H P P
Sbjct: 226 VPSSP----LQPLPPSPRVGSPGPHAHPPLPKRP 255
>gi|38569493 potassium voltage-gated channel, subfamily H
(eag-related), member 3 [Homo sapiens]
Length = 1083
Score = 34.3 bits (77), Expect = 0.050
Identities = 29/91 (31%), Positives = 38/91 (41%), Gaps = 11/91 (12%)
Query: 61 RGRPLQRDGSGGAAGSRDNGS-----SFTGGPERQLTDSCPGPSCATEPPDLGASEPRAQ 115
RG G+GG + D S + E + TD GP+ + P D EP +
Sbjct: 697 RGELSYNLGAGGGSAEVDTSSLSGDNTLMSTLEEKETDGEQGPTVSPAPAD----EPSSP 752
Query: 116 ELDP--VPGSPASQLLLPHPTAPLSSQSGRG 144
L P S A++LL P TAP GRG
Sbjct: 753 LLSPGCTSSSSAAKLLSPRRTAPRPRLGGRG 783
>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
[Homo sapiens]
Length = 2191
Score = 34.3 bits (77), Expect = 0.050
Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 7/99 (7%)
Query: 69 GSGGAAGSRDNG--SSFTGGPERQLTDSCPGPSCATEPPDLGASEPRAQELDPVPGSPAS 126
GS + G + N S F+ L+ GPS + +G+++ R+ + P P S
Sbjct: 646 GSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPA-SIPGS 704
Query: 127 QLLLPHPTAPLSSQSGRGSHQAFPSDPLQMNQDLSEGTK 165
Q+ P P SQS SH A P+ + GT+
Sbjct: 705 QM----PPQPPGSQSESSSHPALSQSPMPQERGFMAGTQ 739
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1
[Homo sapiens]
Length = 2231
Score = 34.3 bits (77), Expect = 0.050
Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 7/99 (7%)
Query: 69 GSGGAAGSRDNG--SSFTGGPERQLTDSCPGPSCATEPPDLGASEPRAQELDPVPGSPAS 126
GS + G + N S F+ L+ GPS + +G+++ R+ + P P S
Sbjct: 633 GSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPA-SIPGS 691
Query: 127 QLLLPHPTAPLSSQSGRGSHQAFPSDPLQMNQDLSEGTK 165
Q+ P P SQS SH A P+ + GT+
Sbjct: 692 QM----PPQPPGSQSESSSHPALSQSPMPQERGFMAGTQ 726
>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
[Homo sapiens]
Length = 2178
Score = 34.3 bits (77), Expect = 0.050
Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 7/99 (7%)
Query: 69 GSGGAAGSRDNG--SSFTGGPERQLTDSCPGPSCATEPPDLGASEPRAQELDPVPGSPAS 126
GS + G + N S F+ L+ GPS + +G+++ R+ + P P S
Sbjct: 633 GSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISPA-SIPGS 691
Query: 127 QLLLPHPTAPLSSQSGRGSHQAFPSDPLQMNQDLSEGTK 165
Q+ P P SQS SH A P+ + GT+
Sbjct: 692 QM----PPQPPGSQSESSSHPALSQSPMPQERGFMAGTQ 726
>gi|238776840 patatin-like phospholipase domain containing 1 isoform
3 [Homo sapiens]
Length = 532
Score = 33.9 bits (76), Expect = 0.066
Identities = 26/70 (37%), Positives = 31/70 (44%), Gaps = 12/70 (17%)
Query: 94 SCPGPSCATEPPDLGASEPRAQELDPVPGSPASQLLLPHPTAPLSSQS----------GR 143
S PG S T PP L P+ Q++ P GSPA L PT+P S R
Sbjct: 383 STPGSSLPTPPPGLSPLSPQ-QQVQP-SGSPARSLHSQAPTSPRPSLGPSTVGAPQTLPR 440
Query: 144 GSHQAFPSDP 153
S AFP+ P
Sbjct: 441 SSLSAFPAQP 450
>gi|224589138 patatin-like phospholipase domain containing 1 isoform
2 [Homo sapiens]
Length = 446
Score = 33.9 bits (76), Expect = 0.066
Identities = 26/70 (37%), Positives = 31/70 (44%), Gaps = 12/70 (17%)
Query: 94 SCPGPSCATEPPDLGASEPRAQELDPVPGSPASQLLLPHPTAPLSSQS----------GR 143
S PG S T PP L P+ Q++ P GSPA L PT+P S R
Sbjct: 297 STPGSSLPTPPPGLSPLSPQ-QQVQP-SGSPARSLHSQAPTSPRPSLGPSTVGAPQTLPR 354
Query: 144 GSHQAFPSDP 153
S AFP+ P
Sbjct: 355 SSLSAFPAQP 364
>gi|224593249 patatin-like phospholipase domain containing 1 isoform
1 [Homo sapiens]
Length = 437
Score = 33.9 bits (76), Expect = 0.066
Identities = 26/70 (37%), Positives = 31/70 (44%), Gaps = 12/70 (17%)
Query: 94 SCPGPSCATEPPDLGASEPRAQELDPVPGSPASQLLLPHPTAPLSSQS----------GR 143
S PG S T PP L P+ Q++ P GSPA L PT+P S R
Sbjct: 288 STPGSSLPTPPPGLSPLSPQ-QQVQP-SGSPARSLHSQAPTSPRPSLGPSTVGAPQTLPR 345
Query: 144 GSHQAFPSDP 153
S AFP+ P
Sbjct: 346 SSLSAFPAQP 355
>gi|239756116 PREDICTED: hypothetical protein [Homo sapiens]
Length = 194
Score = 33.5 bits (75), Expect = 0.086
Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Query: 78 DNGSSFTGGPERQLTDSC-PGPSCATEPPDLG--ASEPRAQELDPVPGSPASQLLLPHPT 134
D S+ GG L SC PG + P G A+ + + P P +PA+Q+ P +
Sbjct: 56 DGSSTLPGGDPACLLKSCSPGLGTRSSPAAAGGGATSGSPRVVTPEPAAPATQVSWPPSS 115
Query: 135 APL---SSQSGRGSHQAFPSDP 153
A L + R QA+PS P
Sbjct: 116 ARLLAGPASPSRAEAQAWPSVP 137
>gi|239750586 PREDICTED: hypothetical protein XP_002347439 [Homo
sapiens]
Length = 300
Score = 33.5 bits (75), Expect = 0.086
Identities = 27/102 (26%), Positives = 33/102 (32%), Gaps = 3/102 (2%)
Query: 36 RPGGCEASQGKLSRQLLPRPLWEEGRGRPLQRDGSGGAAGSRDNGSSFTGGPERQLTDSC 95
R G CE G PR ++ L R GS G R G R+
Sbjct: 15 RVGPCECGGGAAEAGRGPRQRFQPPAAASLPRIGSAPPGGGRALRRGGRGAARRKRKRRA 74
Query: 96 PGPSCATEPPDLGASEPRAQELDPVPGSPASQLLLPHPTAPL 137
P P C P+ PGSPA +P P P+
Sbjct: 75 PAPVCHHRG---SPGSPKFVSPPRSPGSPAGAAQVPPPFPPV 113
>gi|239744954 PREDICTED: hypothetical protein XP_002343343 [Homo
sapiens]
Length = 194
Score = 33.5 bits (75), Expect = 0.086
Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Query: 78 DNGSSFTGGPERQLTDSC-PGPSCATEPPDLG--ASEPRAQELDPVPGSPASQLLLPHPT 134
D S+ GG L SC PG + P G A+ + + P P +PA+Q+ P +
Sbjct: 56 DGSSTLPGGDPACLLKSCSPGLGTRSSPAAAGGGATSGSPRVVTPEPAAPATQVSWPPSS 115
Query: 135 APL---SSQSGRGSHQAFPSDP 153
A L + R QA+PS P
Sbjct: 116 ARLLAGPASPSRAEAQAWPSVP 137
>gi|239744883 PREDICTED: hypothetical protein XP_002344274 [Homo
sapiens]
Length = 300
Score = 33.5 bits (75), Expect = 0.086
Identities = 27/102 (26%), Positives = 33/102 (32%), Gaps = 3/102 (2%)
Query: 36 RPGGCEASQGKLSRQLLPRPLWEEGRGRPLQRDGSGGAAGSRDNGSSFTGGPERQLTDSC 95
R G CE G PR ++ L R GS G R G R+
Sbjct: 15 RVGPCECGGGAAEAGRGPRQRFQPPAAASLPRIGSAPPGGGRALRRGGRGAARRKRKRRA 74
Query: 96 PGPSCATEPPDLGASEPRAQELDPVPGSPASQLLLPHPTAPL 137
P P C P+ PGSPA +P P P+
Sbjct: 75 PAPVCHHRG---SPGSPKFVSPPRSPGSPAGAAQVPPPFPPV 113
>gi|25121980 dispatched B [Homo sapiens]
Length = 1401
Score = 33.5 bits (75), Expect = 0.086
Identities = 35/116 (30%), Positives = 46/116 (39%), Gaps = 16/116 (13%)
Query: 31 GQAAARPGGCEASQGKLSRQLLPRPLWEEG-RGRPLQRDGSGGAAGSRDNGSSFTGGPER 89
G +++ GG + G P P E+ G PL DG GS D+ + PE
Sbjct: 3 GDSSSSSGGSGPAPG-------PGPEGEQRPEGEPLAPDG-----GSPDSTQTKAVPPEA 50
Query: 90 QLTDSCPGPSCATEPPDLGAS-EPRAQELDPVPGSPASQLLLPHPTAPLSSQSGRG 144
SC SC E P + P L PV P+S L H T P + Q +G
Sbjct: 51 SPERSCSLHSCPLEDPSSSSGPPPTTSTLQPV--GPSSPLAPAHFTYPRALQEYQG 104
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.132 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,845,180
Number of Sequences: 37866
Number of extensions: 572599
Number of successful extensions: 2944
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 330
Number of HSP's that attempted gapping in prelim test: 2682
Number of HSP's gapped (non-prelim): 611
length of query: 165
length of database: 18,247,518
effective HSP length: 94
effective length of query: 71
effective length of database: 14,688,114
effective search space: 1042856094
effective search space used: 1042856094
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.