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Search of human proteins with 239757110
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239757110 PREDICTED: hypothetical protein [Homo sapiens]
(192 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239757110 PREDICTED: hypothetical protein [Homo sapiens] 419 e-118
gi|239742467 PREDICTED: double homeobox, 4-like [Homo sapiens] 47 8e-06
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 47 8e-06
gi|239744249 PREDICTED: similar to double homeobox, 4 [Homo sapi... 47 1e-05
gi|239744248 PREDICTED: similar to double homeobox, 4 [Homo sapi... 47 1e-05
gi|239744246 PREDICTED: hypothetical protein XP_002343082 [Homo ... 47 1e-05
gi|239744244 PREDICTED: similar to double homeobox, 4 [Homo sapi... 47 1e-05
gi|239744242 PREDICTED: similar to double homeobox, 4 [Homo sapi... 47 1e-05
gi|239744240 PREDICTED: similar to double homeobox, 4 [Homo sapi... 47 1e-05
gi|239742468 PREDICTED: double homeobox, 4-like [Homo sapiens] 47 1e-05
gi|194272172 double homeobox, 4 [Homo sapiens] 47 1e-05
gi|194272217 double homeobox, 4-like [Homo sapiens] 47 1e-05
gi|194272216 double homeobox, 4-like [Homo sapiens] 47 1e-05
gi|194272215 double homeobox, 4-like [Homo sapiens] 47 1e-05
gi|194272192 double homeobox, 4-like [Homo sapiens] 47 1e-05
gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo... 46 2e-05
gi|33598937 scavenger receptor class F, member 2 isoform 2 [Homo... 46 2e-05
gi|54860079 nadrin isoform 1 [Homo sapiens] 44 6e-05
gi|54860105 nadrin isoform 2 [Homo sapiens] 44 6e-05
gi|239747300 PREDICTED: hypothetical protein XP_002346414 [Homo ... 44 8e-05
gi|239741124 PREDICTED: hypothetical protein XP_002342114 [Homo ... 44 8e-05
gi|113416879 PREDICTED: hypothetical protein [Homo sapiens] 43 1e-04
gi|13699803 WAS protein family, member 3 [Homo sapiens] 43 2e-04
gi|239752764 PREDICTED: hypothetical protein [Homo sapiens] 42 3e-04
gi|55750053 atrophin-1 [Homo sapiens] 42 4e-04
gi|55750041 atrophin-1 [Homo sapiens] 42 4e-04
gi|39812378 RAN binding protein 9 [Homo sapiens] 41 5e-04
gi|239749251 PREDICTED: similar to hCG2042508 [Homo sapiens] 40 0.001
gi|239743343 PREDICTED: similar to hCG2042508 [Homo sapiens] 40 0.001
gi|239509031 PREDICTED: similar to hCG2042508 [Homo sapiens] 40 0.001
>gi|239757110 PREDICTED: hypothetical protein [Homo sapiens]
Length = 192
Score = 419 bits (1078), Expect = e-118
Identities = 192/192 (100%), Positives = 192/192 (100%)
Query: 1 MGLAEESAAGHPTPGGPASARRAHSGRPHQARRHPAAWGLPVRRPSHPPRPTTSSWANGS 60
MGLAEESAAGHPTPGGPASARRAHSGRPHQARRHPAAWGLPVRRPSHPPRPTTSSWANGS
Sbjct: 1 MGLAEESAAGHPTPGGPASARRAHSGRPHQARRHPAAWGLPVRRPSHPPRPTTSSWANGS 60
Query: 61 NRQHPAELSVQLPANPPPGLNQGCIRAASAPRWVPTLTVPQATLPGGSQGHRRCRGEGEG 120
NRQHPAELSVQLPANPPPGLNQGCIRAASAPRWVPTLTVPQATLPGGSQGHRRCRGEGEG
Sbjct: 61 NRQHPAELSVQLPANPPPGLNQGCIRAASAPRWVPTLTVPQATLPGGSQGHRRCRGEGEG 120
Query: 121 QRRGCVEKQPRPTPTPACELTGLAPAPPTPPPAWWRWARTGTRAMGGAASTGSAPTAGRA 180
QRRGCVEKQPRPTPTPACELTGLAPAPPTPPPAWWRWARTGTRAMGGAASTGSAPTAGRA
Sbjct: 121 QRRGCVEKQPRPTPTPACELTGLAPAPPTPPPAWWRWARTGTRAMGGAASTGSAPTAGRA 180
Query: 181 PAVLGPGPPHCA 192
PAVLGPGPPHCA
Sbjct: 181 PAVLGPGPPHCA 192
>gi|239742467 PREDICTED: double homeobox, 4-like [Homo sapiens]
Length = 483
Score = 47.4 bits (111), Expect = 8e-06
Identities = 56/188 (29%), Positives = 69/188 (36%), Gaps = 28/188 (14%)
Query: 10 GHPTPGGPASARRAHSGRPHQARRHPAAWG-LP-------VRRPSHPPRPTTSSWANGSN 61
GHP P A A G A P A G LP R + +P+ ++ A G +
Sbjct: 232 GHPAPSWVAFAHTGAWGTGLPAPHVPCAPGALPQGAFVSQAARAAPALQPSQAAPAEGVS 291
Query: 62 RQHPAELSVQLPANPPPGLNQGCIRAASAPRWVPTLTVPQATLPGGSQGHRRCRGEGEGQ 121
+ PA A PP G + APRW P PG S+ R + +G
Sbjct: 292 QPAPARGDFAYAAPAPP---DGALSHPQAPRWPPH--------PGKSREDRD--PQRDGL 338
Query: 122 RRGCVEKQPRPTPTPACELTGLAPAPPTPPPAWWRWARTGTRAMGGAASTGSAPTAGRAP 181
C QP P LAP P + WW W R G + G A P AG AP
Sbjct: 339 PGPCAVAQPGPAQAGPQGQGVLAP-PTSQGSPWWGWGR-GPQVAGAAWE----PQAGEAP 392
Query: 182 AVLGPGPP 189
P PP
Sbjct: 393 PP-QPAPP 399
Score = 28.5 bits (62), Expect = 3.7
Identities = 26/78 (33%), Positives = 30/78 (38%), Gaps = 17/78 (21%)
Query: 111 HRRCRGEGEGQRRGCVEKQPRPTPTPACELTGLAPAPPTPPPAWWRWARTGTRAMGGAAS 170
+RR R G+G R P A L AP P P+W +A T GA
Sbjct: 205 NRRARHPGQGGR----------APAQAGGLCSAAPGGGHPAPSWVAFAHT------GAWG 248
Query: 171 TG-SAPTAGRAPAVLGPG 187
TG AP AP L G
Sbjct: 249 TGLPAPHVPCAPGALPQG 266
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 47.4 bits (111), Expect = 8e-06
Identities = 53/200 (26%), Positives = 62/200 (31%), Gaps = 45/200 (22%)
Query: 1 MGLAEESAAGHPTPGGPASARRAHSGRPHQARRHPAAWGLPVRRPS-HPPRPTTSSWANG 59
MGL + P PG PHQ ++ P P ++P H P P
Sbjct: 38 MGLNQNRGPMGPGPGQSGPKPPIPPPPPHQQQQQPPPQQPPPQQPPPHQPPP-------- 89
Query: 60 SNRQHPAELSVQLPANPP-----------PGLNQGCIRAASAPRWVPTLTVPQATLPGGS 108
HP Q P PP PG G A A P T P + P GS
Sbjct: 90 ----HPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPTSGAPPGS 145
Query: 109 QGHRRCRGEGEGQRRGCVEKQPRPTPTPACELTGLAPAPPTPPPAWWRWARTGTRAMGGA 168
P PTPTP +T P P P P T +A G
Sbjct: 146 G--------------------PGPTPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQAGGPP 185
Query: 169 ASTGSAPTAGRAPAVLGPGP 188
+ P G P GPGP
Sbjct: 186 PPPAAVPGPGPGPK-QGPGP 204
>gi|239744249 PREDICTED: similar to double homeobox, 4 [Homo
sapiens]
Length = 483
Score = 47.0 bits (110), Expect = 1e-05
Identities = 56/188 (29%), Positives = 69/188 (36%), Gaps = 28/188 (14%)
Query: 10 GHPTPGGPASARRAHSGRPHQARRHPAAWG-LP-------VRRPSHPPRPTTSSWANGSN 61
GHP P A A G A P A G LP R + +P+ ++ A G +
Sbjct: 232 GHPAPSWVAFAHTGAWGTGLPAPHVPCAPGALPQGAFVSQAARAAPALQPSQAAPAEGIS 291
Query: 62 RQHPAELSVQLPANPPPGLNQGCIRAASAPRWVPTLTVPQATLPGGSQGHRRCRGEGEGQ 121
+ PA A PP G + APRW P PG S+ R + +G
Sbjct: 292 QPAPARGDFAYAAPAPP---DGALSHPQAPRWPPH--------PGKSREDRD--PQRDGL 338
Query: 122 RRGCVEKQPRPTPTPACELTGLAPAPPTPPPAWWRWARTGTRAMGGAASTGSAPTAGRAP 181
C QP P LAP P + WW W R G + G A P AG AP
Sbjct: 339 PGPCAVAQPGPAQAGPQGQGVLAP-PTSQGSPWWGWGR-GPQVAGAAWE----PQAGAAP 392
Query: 182 AVLGPGPP 189
P PP
Sbjct: 393 PP-QPAPP 399
Score = 28.5 bits (62), Expect = 3.7
Identities = 26/78 (33%), Positives = 30/78 (38%), Gaps = 17/78 (21%)
Query: 111 HRRCRGEGEGQRRGCVEKQPRPTPTPACELTGLAPAPPTPPPAWWRWARTGTRAMGGAAS 170
+RR R G+G R P A L AP P P+W +A T GA
Sbjct: 205 NRRARHPGQGGR----------APAQAGGLCSAAPGGGHPAPSWVAFAHT------GAWG 248
Query: 171 TG-SAPTAGRAPAVLGPG 187
TG AP AP L G
Sbjct: 249 TGLPAPHVPCAPGALPQG 266
>gi|239744248 PREDICTED: similar to double homeobox, 4 [Homo
sapiens]
Length = 483
Score = 47.0 bits (110), Expect = 1e-05
Identities = 56/188 (29%), Positives = 69/188 (36%), Gaps = 28/188 (14%)
Query: 10 GHPTPGGPASARRAHSGRPHQARRHPAAWG-LP-------VRRPSHPPRPTTSSWANGSN 61
GHP P A A G A P A G LP R + +P+ ++ A G +
Sbjct: 232 GHPAPSWVAFAHTGAWGTGLPAPHVPCAPGALPQGAFVSQAARAAPALQPSQAAPAEGIS 291
Query: 62 RQHPAELSVQLPANPPPGLNQGCIRAASAPRWVPTLTVPQATLPGGSQGHRRCRGEGEGQ 121
+ PA A PP G + APRW P PG S+ R + +G
Sbjct: 292 QPAPARGDFAYAAPAPP---DGALSHPQAPRWPPH--------PGKSREDRD--PQRDGL 338
Query: 122 RRGCVEKQPRPTPTPACELTGLAPAPPTPPPAWWRWARTGTRAMGGAASTGSAPTAGRAP 181
C QP P LAP P + WW W R G + G A P AG AP
Sbjct: 339 PGPCAVAQPGPAQAGPQGQGVLAP-PTSQGSPWWGWGR-GPQVAGAAWE----PQAGAAP 392
Query: 182 AVLGPGPP 189
P PP
Sbjct: 393 PP-QPAPP 399
Score = 28.5 bits (62), Expect = 3.7
Identities = 26/78 (33%), Positives = 30/78 (38%), Gaps = 17/78 (21%)
Query: 111 HRRCRGEGEGQRRGCVEKQPRPTPTPACELTGLAPAPPTPPPAWWRWARTGTRAMGGAAS 170
+RR R G+G R P A L AP P P+W +A T GA
Sbjct: 205 NRRARHPGQGGR----------APAQAGGLCSAAPGGGHPAPSWVAFAHT------GAWG 248
Query: 171 TG-SAPTAGRAPAVLGPG 187
TG AP AP L G
Sbjct: 249 TGLPAPHVPCAPGALPQG 266
>gi|239744246 PREDICTED: hypothetical protein XP_002343082 [Homo
sapiens]
Length = 483
Score = 47.0 bits (110), Expect = 1e-05
Identities = 56/188 (29%), Positives = 69/188 (36%), Gaps = 28/188 (14%)
Query: 10 GHPTPGGPASARRAHSGRPHQARRHPAAWG-LP-------VRRPSHPPRPTTSSWANGSN 61
GHP P A A G A P A G LP R + +P+ ++ A G +
Sbjct: 232 GHPAPSWVAFAHTGAWGTGLPAPHVPCAPGALPQGAFVSQAARAAPALQPSQAAPAEGIS 291
Query: 62 RQHPAELSVQLPANPPPGLNQGCIRAASAPRWVPTLTVPQATLPGGSQGHRRCRGEGEGQ 121
+ PA A PP G + APRW P PG S+ R + +G
Sbjct: 292 QPAPARGDFAYAAPAPP---DGALSHPQAPRWPPH--------PGKSREDRD--PQRDGL 338
Query: 122 RRGCVEKQPRPTPTPACELTGLAPAPPTPPPAWWRWARTGTRAMGGAASTGSAPTAGRAP 181
C QP P LAP P + WW W R G + G A P AG AP
Sbjct: 339 PGPCAVAQPGPAQAGPQGQGVLAP-PTSQGSPWWGWGR-GPQVAGAAWE----PQAGAAP 392
Query: 182 AVLGPGPP 189
P PP
Sbjct: 393 PP-QPAPP 399
Score = 28.5 bits (62), Expect = 3.7
Identities = 26/78 (33%), Positives = 30/78 (38%), Gaps = 17/78 (21%)
Query: 111 HRRCRGEGEGQRRGCVEKQPRPTPTPACELTGLAPAPPTPPPAWWRWARTGTRAMGGAAS 170
+RR R G+G R P A L AP P P+W +A T GA
Sbjct: 205 NRRARHPGQGGR----------APAQAGGLCNAAPGGGHPAPSWVAFAHT------GAWG 248
Query: 171 TG-SAPTAGRAPAVLGPG 187
TG AP AP L G
Sbjct: 249 TGLPAPHVPCAPGALPQG 266
>gi|239744244 PREDICTED: similar to double homeobox, 4 [Homo
sapiens]
Length = 483
Score = 47.0 bits (110), Expect = 1e-05
Identities = 56/188 (29%), Positives = 69/188 (36%), Gaps = 28/188 (14%)
Query: 10 GHPTPGGPASARRAHSGRPHQARRHPAAWG-LP-------VRRPSHPPRPTTSSWANGSN 61
GHP P A A G A P A G LP R + +P+ ++ A G +
Sbjct: 232 GHPAPSWVAFAHTGAWGTGLPAPHVPCAPGALPQGAFVSQAARAAPALQPSQAAPAEGIS 291
Query: 62 RQHPAELSVQLPANPPPGLNQGCIRAASAPRWVPTLTVPQATLPGGSQGHRRCRGEGEGQ 121
+ PA A PP G + APRW P PG S+ R + +G
Sbjct: 292 QPAPARGDFAYAAPAPP---DGALSHPQAPRWPPH--------PGKSREDRD--PQRDGL 338
Query: 122 RRGCVEKQPRPTPTPACELTGLAPAPPTPPPAWWRWARTGTRAMGGAASTGSAPTAGRAP 181
C QP P LAP P + WW W R G + G A P AG AP
Sbjct: 339 PGPCAVAQPGPAQAGPQGQGVLAP-PTSQGSPWWGWGR-GPQVAGAAWE----PQAGAAP 392
Query: 182 AVLGPGPP 189
P PP
Sbjct: 393 PP-QPAPP 399
Score = 28.5 bits (62), Expect = 3.7
Identities = 26/78 (33%), Positives = 30/78 (38%), Gaps = 17/78 (21%)
Query: 111 HRRCRGEGEGQRRGCVEKQPRPTPTPACELTGLAPAPPTPPPAWWRWARTGTRAMGGAAS 170
+RR R G+G R P A L AP P P+W +A T GA
Sbjct: 205 NRRARHPGQGGR----------APAQAGGLCSAAPGGGHPAPSWVAFAHT------GAWG 248
Query: 171 TG-SAPTAGRAPAVLGPG 187
TG AP AP L G
Sbjct: 249 TGLPAPHVPCAPGALPQG 266
>gi|239744242 PREDICTED: similar to double homeobox, 4 [Homo
sapiens]
Length = 483
Score = 47.0 bits (110), Expect = 1e-05
Identities = 56/188 (29%), Positives = 69/188 (36%), Gaps = 28/188 (14%)
Query: 10 GHPTPGGPASARRAHSGRPHQARRHPAAWG-LP-------VRRPSHPPRPTTSSWANGSN 61
GHP P A A G A P A G LP R + +P+ ++ A G +
Sbjct: 232 GHPAPSWVAFAHTGAWGTGLPAPHVPCAPGALPQGAFVSQAARAAPALQPSQAAPAEGIS 291
Query: 62 RQHPAELSVQLPANPPPGLNQGCIRAASAPRWVPTLTVPQATLPGGSQGHRRCRGEGEGQ 121
+ PA A PP G + APRW P PG S+ R + +G
Sbjct: 292 QPAPARGDFAYAAPAPP---DGALSHPQAPRWPPH--------PGKSREDRD--PQRDGL 338
Query: 122 RRGCVEKQPRPTPTPACELTGLAPAPPTPPPAWWRWARTGTRAMGGAASTGSAPTAGRAP 181
C QP P LAP P + WW W R G + G A P AG AP
Sbjct: 339 PGPCAVAQPGPAQAGPQGQGVLAP-PTSQGSPWWGWGR-GPQVAGAAWE----PQAGAAP 392
Query: 182 AVLGPGPP 189
P PP
Sbjct: 393 PP-QPAPP 399
Score = 28.5 bits (62), Expect = 3.7
Identities = 26/78 (33%), Positives = 30/78 (38%), Gaps = 17/78 (21%)
Query: 111 HRRCRGEGEGQRRGCVEKQPRPTPTPACELTGLAPAPPTPPPAWWRWARTGTRAMGGAAS 170
+RR R G+G R P A L AP P P+W +A T GA
Sbjct: 205 NRRARHPGQGGR----------APAQAGGLCSAAPGGGHPAPSWVAFAHT------GAWG 248
Query: 171 TG-SAPTAGRAPAVLGPG 187
TG AP AP L G
Sbjct: 249 TGLPAPHVPCAPGALPQG 266
>gi|239744240 PREDICTED: similar to double homeobox, 4 [Homo
sapiens]
Length = 483
Score = 47.0 bits (110), Expect = 1e-05
Identities = 56/188 (29%), Positives = 69/188 (36%), Gaps = 28/188 (14%)
Query: 10 GHPTPGGPASARRAHSGRPHQARRHPAAWG-LP-------VRRPSHPPRPTTSSWANGSN 61
GHP P A A G A P A G LP R + +P+ ++ A G +
Sbjct: 232 GHPAPSWVAFAHTGAWGTGLPAPHVPCAPGALPQGAFVSQAARAAPALQPSQAAPAEGIS 291
Query: 62 RQHPAELSVQLPANPPPGLNQGCIRAASAPRWVPTLTVPQATLPGGSQGHRRCRGEGEGQ 121
+ PA A PP G + APRW P PG S+ R + +G
Sbjct: 292 QPAPARGDFAYAAPAPP---DGALSHPQAPRWPPH--------PGKSREDRD--PQRDGL 338
Query: 122 RRGCVEKQPRPTPTPACELTGLAPAPPTPPPAWWRWARTGTRAMGGAASTGSAPTAGRAP 181
C QP P LAP P + WW W R G + G A P AG AP
Sbjct: 339 PGPCAVAQPGPAQAGPQGQGVLAP-PTSQGSPWWGWGR-GPQVAGAAWE----PQAGAAP 392
Query: 182 AVLGPGPP 189
P PP
Sbjct: 393 PP-QPAPP 399
Score = 28.5 bits (62), Expect = 3.7
Identities = 26/78 (33%), Positives = 30/78 (38%), Gaps = 17/78 (21%)
Query: 111 HRRCRGEGEGQRRGCVEKQPRPTPTPACELTGLAPAPPTPPPAWWRWARTGTRAMGGAAS 170
+RR R G+G R P A L AP P P+W +A T GA
Sbjct: 205 NRRARHPGQGGR----------APAQAGGLCSAAPGGGHPAPSWVAFAHT------GAWG 248
Query: 171 TG-SAPTAGRAPAVLGPG 187
TG AP AP L G
Sbjct: 249 TGLPAPHVPCAPGALPQG 266
>gi|239742468 PREDICTED: double homeobox, 4-like [Homo sapiens]
Length = 485
Score = 47.0 bits (110), Expect = 1e-05
Identities = 56/188 (29%), Positives = 69/188 (36%), Gaps = 28/188 (14%)
Query: 10 GHPTPGGPASARRAHSGRPHQARRHPAAWG-LP-------VRRPSHPPRPTTSSWANGSN 61
GHP P A A G A P A G LP R + +P+ ++ A G +
Sbjct: 232 GHPAPSWVAFAHTGAWGTGLPAPHVPCAPGALPQGAFVSQAARAAPALQPSQAAPAEGVS 291
Query: 62 RQHPAELSVQLPANPPPGLNQGCIRAASAPRWVPTLTVPQATLPGGSQGHRRCRGEGEGQ 121
+ PA A PP G + APRW P PG S+ R + +G
Sbjct: 292 QPAPARGDFAYAAPAPP---DGALSHPQAPRWPPH--------PGKSREDRD--PQRDGL 338
Query: 122 RRGCVEKQPRPTPTPACELTGLAPAPPTPPPAWWRWARTGTRAMGGAASTGSAPTAGRAP 181
C QP P LAP P + WW W R G + G A P AG AP
Sbjct: 339 PGPCAVAQPGPAQAGPQGQGVLAP-PTSQGSPWWGWGR-GPQVAGAAWE----PQAGAAP 392
Query: 182 AVLGPGPP 189
P PP
Sbjct: 393 PP-QPAPP 399
Score = 28.5 bits (62), Expect = 3.7
Identities = 26/78 (33%), Positives = 30/78 (38%), Gaps = 17/78 (21%)
Query: 111 HRRCRGEGEGQRRGCVEKQPRPTPTPACELTGLAPAPPTPPPAWWRWARTGTRAMGGAAS 170
+RR R G+G R P A L AP P P+W +A T GA
Sbjct: 205 NRRARHPGQGGR----------APAQAGGLCSAAPGGGHPAPSWVAFAHT------GAWG 248
Query: 171 TG-SAPTAGRAPAVLGPG 187
TG AP AP L G
Sbjct: 249 TGLPAPHVPCAPGALPQG 266
>gi|194272172 double homeobox, 4 [Homo sapiens]
Length = 485
Score = 47.0 bits (110), Expect = 1e-05
Identities = 56/188 (29%), Positives = 69/188 (36%), Gaps = 28/188 (14%)
Query: 10 GHPTPGGPASARRAHSGRPHQARRHPAAWG-LP-------VRRPSHPPRPTTSSWANGSN 61
GHP P A A G A P A G LP R + +P+ ++ A G +
Sbjct: 232 GHPAPSWVAFAHTGAWGTGLPAPHVPCAPGALPQGAFVSQAARAAPALQPSQAAPAEGVS 291
Query: 62 RQHPAELSVQLPANPPPGLNQGCIRAASAPRWVPTLTVPQATLPGGSQGHRRCRGEGEGQ 121
+ PA A PP G + APRW P PG S+ R + +G
Sbjct: 292 QPAPARGDFAYAAPAPP---DGALSHPQAPRWPPH--------PGKSREDRD--PQRDGL 338
Query: 122 RRGCVEKQPRPTPTPACELTGLAPAPPTPPPAWWRWARTGTRAMGGAASTGSAPTAGRAP 181
C QP P LAP P + WW W R G + G A P AG AP
Sbjct: 339 PGPCAVAQPGPAQAGPQGQGVLAP-PTSQGSPWWGWGR-GPQVAGAAWE----PQAGAAP 392
Query: 182 AVLGPGPP 189
P PP
Sbjct: 393 PP-QPAPP 399
Score = 28.5 bits (62), Expect = 3.7
Identities = 26/78 (33%), Positives = 30/78 (38%), Gaps = 17/78 (21%)
Query: 111 HRRCRGEGEGQRRGCVEKQPRPTPTPACELTGLAPAPPTPPPAWWRWARTGTRAMGGAAS 170
+RR R G+G R P A L AP P P+W +A T GA
Sbjct: 205 NRRARHPGQGGR----------APAQAGGLCSAAPGGGHPAPSWVAFAHT------GAWG 248
Query: 171 TG-SAPTAGRAPAVLGPG 187
TG AP AP L G
Sbjct: 249 TGLPAPHVPCAPGALPQG 266
>gi|194272217 double homeobox, 4-like [Homo sapiens]
Length = 485
Score = 47.0 bits (110), Expect = 1e-05
Identities = 56/188 (29%), Positives = 69/188 (36%), Gaps = 28/188 (14%)
Query: 10 GHPTPGGPASARRAHSGRPHQARRHPAAWG-LP-------VRRPSHPPRPTTSSWANGSN 61
GHP P A A G A P A G LP R + +P+ ++ A G +
Sbjct: 232 GHPAPSWVAFAHTGAWGTGLPAPHVPCAPGALPQGAFVSQAARAAPALQPSQAAPAEGVS 291
Query: 62 RQHPAELSVQLPANPPPGLNQGCIRAASAPRWVPTLTVPQATLPGGSQGHRRCRGEGEGQ 121
+ PA A PP G + APRW P PG S+ R + +G
Sbjct: 292 QPAPARGDFAYAAPAPP---DGALSHPQAPRWPPH--------PGKSREDRD--PQRDGL 338
Query: 122 RRGCVEKQPRPTPTPACELTGLAPAPPTPPPAWWRWARTGTRAMGGAASTGSAPTAGRAP 181
C QP P LAP P + WW W R G + G A P AG AP
Sbjct: 339 PGPCAVAQPGPAQAGPQGQGVLAP-PTSQGSPWWGWGR-GPQVAGAAWE----PQAGAAP 392
Query: 182 AVLGPGPP 189
P PP
Sbjct: 393 PP-QPAPP 399
Score = 28.5 bits (62), Expect = 3.7
Identities = 26/78 (33%), Positives = 30/78 (38%), Gaps = 17/78 (21%)
Query: 111 HRRCRGEGEGQRRGCVEKQPRPTPTPACELTGLAPAPPTPPPAWWRWARTGTRAMGGAAS 170
+RR R G+G R P A L AP P P+W +A T GA
Sbjct: 205 NRRARHPGQGGR----------APAQAGGLCSAAPGGGHPAPSWVAFAHT------GAWG 248
Query: 171 TG-SAPTAGRAPAVLGPG 187
TG AP AP L G
Sbjct: 249 TGLPAPHVPCAPGALPQG 266
>gi|194272216 double homeobox, 4-like [Homo sapiens]
Length = 485
Score = 47.0 bits (110), Expect = 1e-05
Identities = 56/188 (29%), Positives = 69/188 (36%), Gaps = 28/188 (14%)
Query: 10 GHPTPGGPASARRAHSGRPHQARRHPAAWG-LP-------VRRPSHPPRPTTSSWANGSN 61
GHP P A A G A P A G LP R + +P+ ++ A G +
Sbjct: 232 GHPAPSWVAFAHTGAWGTGLPAPHVPCAPGALPQGAFVSQAARAAPALQPSQAAPAEGVS 291
Query: 62 RQHPAELSVQLPANPPPGLNQGCIRAASAPRWVPTLTVPQATLPGGSQGHRRCRGEGEGQ 121
+ PA A PP G + APRW P PG S+ R + +G
Sbjct: 292 QPAPARGDFAYAAPAPP---DGALSHPQAPRWPPH--------PGKSREDRD--PQRDGL 338
Query: 122 RRGCVEKQPRPTPTPACELTGLAPAPPTPPPAWWRWARTGTRAMGGAASTGSAPTAGRAP 181
C QP P LAP P + WW W R G + G A P AG AP
Sbjct: 339 PGPCAVAQPGPAQAGPQGQGVLAP-PTSQGSPWWGWGR-GPQVAGAAWE----PQAGAAP 392
Query: 182 AVLGPGPP 189
P PP
Sbjct: 393 PP-QPAPP 399
Score = 28.5 bits (62), Expect = 3.7
Identities = 26/78 (33%), Positives = 30/78 (38%), Gaps = 17/78 (21%)
Query: 111 HRRCRGEGEGQRRGCVEKQPRPTPTPACELTGLAPAPPTPPPAWWRWARTGTRAMGGAAS 170
+RR R G+G R P A L AP P P+W +A T GA
Sbjct: 205 NRRARHPGQGGR----------APAQAGGLCSAAPGGGHPAPSWVAFAHT------GAWG 248
Query: 171 TG-SAPTAGRAPAVLGPG 187
TG AP AP L G
Sbjct: 249 TGLPAPHVPCAPGALPQG 266
>gi|194272215 double homeobox, 4-like [Homo sapiens]
Length = 485
Score = 47.0 bits (110), Expect = 1e-05
Identities = 56/188 (29%), Positives = 69/188 (36%), Gaps = 28/188 (14%)
Query: 10 GHPTPGGPASARRAHSGRPHQARRHPAAWG-LP-------VRRPSHPPRPTTSSWANGSN 61
GHP P A A G A P A G LP R + +P+ ++ A G +
Sbjct: 232 GHPAPSWVAFAHTGAWGTGLPAPHVPCAPGALPQGAFVSQAARAAPALQPSQAAPAEGVS 291
Query: 62 RQHPAELSVQLPANPPPGLNQGCIRAASAPRWVPTLTVPQATLPGGSQGHRRCRGEGEGQ 121
+ PA A PP G + APRW P PG S+ R + +G
Sbjct: 292 QPAPARGDFAYAAPAPP---DGALSHPQAPRWPPH--------PGKSREDRD--PQRDGL 338
Query: 122 RRGCVEKQPRPTPTPACELTGLAPAPPTPPPAWWRWARTGTRAMGGAASTGSAPTAGRAP 181
C QP P LAP P + WW W R G + G A P AG AP
Sbjct: 339 PGPCAVAQPGPAQAGPQGQGVLAP-PTSQGSPWWGWGR-GPQVAGAAWE----PQAGAAP 392
Query: 182 AVLGPGPP 189
P PP
Sbjct: 393 PP-QPAPP 399
Score = 28.5 bits (62), Expect = 3.7
Identities = 26/78 (33%), Positives = 30/78 (38%), Gaps = 17/78 (21%)
Query: 111 HRRCRGEGEGQRRGCVEKQPRPTPTPACELTGLAPAPPTPPPAWWRWARTGTRAMGGAAS 170
+RR R G+G R P A L AP P P+W +A T GA
Sbjct: 205 NRRARHPGQGGR----------APAQAGGLCSAAPGGGHPAPSWVAFAHT------GAWG 248
Query: 171 TG-SAPTAGRAPAVLGPG 187
TG AP AP L G
Sbjct: 249 TGLPAPHVPCAPGALPQG 266
>gi|194272192 double homeobox, 4-like [Homo sapiens]
Length = 485
Score = 47.0 bits (110), Expect = 1e-05
Identities = 56/188 (29%), Positives = 69/188 (36%), Gaps = 28/188 (14%)
Query: 10 GHPTPGGPASARRAHSGRPHQARRHPAAWG-LP-------VRRPSHPPRPTTSSWANGSN 61
GHP P A A G A P A G LP R + +P+ ++ A G +
Sbjct: 232 GHPAPSWVAFAHTGAWGTGLPAPHVPCAPGALPQGAFVSQAARAAPALQPSQAAPAEGVS 291
Query: 62 RQHPAELSVQLPANPPPGLNQGCIRAASAPRWVPTLTVPQATLPGGSQGHRRCRGEGEGQ 121
+ PA A PP G + APRW P PG S+ R + +G
Sbjct: 292 QPAPARGDFAYAAPAPP---DGALSHPQAPRWPPH--------PGKSREDRD--PQRDGL 338
Query: 122 RRGCVEKQPRPTPTPACELTGLAPAPPTPPPAWWRWARTGTRAMGGAASTGSAPTAGRAP 181
C QP P LAP P + WW W R G + G A P AG AP
Sbjct: 339 PGPCAVAQPGPAQAGPQGQGVLAP-PTSQGSPWWGWGR-GPQVAGAAWE----PQAGAAP 392
Query: 182 AVLGPGPP 189
P PP
Sbjct: 393 PP-QPAPP 399
Score = 28.5 bits (62), Expect = 3.7
Identities = 26/78 (33%), Positives = 30/78 (38%), Gaps = 17/78 (21%)
Query: 111 HRRCRGEGEGQRRGCVEKQPRPTPTPACELTGLAPAPPTPPPAWWRWARTGTRAMGGAAS 170
+RR R G+G R P A L AP P P+W +A T GA
Sbjct: 205 NRRARHPGQGGR----------APAQAGGLCSAAPGGGHPAPSWVAFAHT------GAWG 248
Query: 171 TG-SAPTAGRAPAVLGPG 187
TG AP AP L G
Sbjct: 249 TGLPAPHVPCAPGALPQG 266
>gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo
sapiens]
Length = 870
Score = 46.2 bits (108), Expect = 2e-05
Identities = 61/215 (28%), Positives = 75/215 (34%), Gaps = 46/215 (21%)
Query: 4 AEESAAGHPTPGGPASARRAH-SGRPHQARRHPAAWGL---PVRRPSHPPRPTTS---SW 56
+E SA+ PGG AR A RP +AR L P RR PP P T SW
Sbjct: 613 SERSASSVEGPGGALYARVARREARPARARGEIGGLSLSPSPERRKPPPPDPATKPKVSW 672
Query: 57 ANGSNRQHPAELSVQLPANPPPGLNQGCIRAASAPRWVPTLTVPQATLPGGSQGHRRCRG 116
+G +H A + + P+ PPPG AA +P + P H G
Sbjct: 673 IHG---KHSAAAAGRAPSPPPPG-----SEAAPSPS-------KRKRTPSDKSAHTVEHG 717
Query: 117 EGEGQRRGCVEKQPRPTPTPACELTGLAPAPP------TPPPAWWRWARTGTRAMGGAAS 170
+ + PRP P AP+PP P P R AAS
Sbjct: 718 SPRTR-----DPTPRPPGLPEEATALAAPSPPRARARAAPRPLGAHGRRRSPAKRAEAAS 772
Query: 171 ------TGSAPTAGRAPAVLG-------PGPPHCA 192
G + GRA LG P PP A
Sbjct: 773 MLAADVRGKTRSLGRAEVALGAQGPREKPAPPQKA 807
>gi|33598937 scavenger receptor class F, member 2 isoform 2 [Homo
sapiens]
Length = 865
Score = 46.2 bits (108), Expect = 2e-05
Identities = 61/215 (28%), Positives = 75/215 (34%), Gaps = 46/215 (21%)
Query: 4 AEESAAGHPTPGGPASARRAH-SGRPHQARRHPAAWGL---PVRRPSHPPRPTTS---SW 56
+E SA+ PGG AR A RP +AR L P RR PP P T SW
Sbjct: 608 SERSASSVEGPGGALYARVARREARPARARGEIGGLSLSPSPERRKPPPPDPATKPKVSW 667
Query: 57 ANGSNRQHPAELSVQLPANPPPGLNQGCIRAASAPRWVPTLTVPQATLPGGSQGHRRCRG 116
+G +H A + + P+ PPPG AA +P + P H G
Sbjct: 668 IHG---KHSAAAAGRAPSPPPPG-----SEAAPSPS-------KRKRTPSDKSAHTVEHG 712
Query: 117 EGEGQRRGCVEKQPRPTPTPACELTGLAPAPP------TPPPAWWRWARTGTRAMGGAAS 170
+ + PRP P AP+PP P P R AAS
Sbjct: 713 SPRTR-----DPTPRPPGLPEEATALAAPSPPRARARAAPRPLGAHGRRRSPAKRAEAAS 767
Query: 171 ------TGSAPTAGRAPAVLG-------PGPPHCA 192
G + GRA LG P PP A
Sbjct: 768 MLAADVRGKTRSLGRAEVALGAQGPREKPAPPQKA 802
>gi|54860079 nadrin isoform 1 [Homo sapiens]
Length = 881
Score = 44.3 bits (103), Expect = 6e-05
Identities = 51/181 (28%), Positives = 69/181 (38%), Gaps = 43/181 (23%)
Query: 10 GHPTPGGPASARRAHSGR--PHQARRHPAAWGLPVRRPSHPPRPTTSSWANGSNRQHP-- 65
G P+ SA R +S P QA HP P PP T N Q P
Sbjct: 687 GQPSAPSQLSAPRRYSSSLSPIQAPNHP---------PPQPPTQATPLMHTKPNSQGPPN 737
Query: 66 -----AELSVQLPANPPPGLNQGCIRAASAP--RWVPTLTVPQATLPGGSQGHRRCRGEG 118
+E ++ P++ PP Q ++ P + P+L PQ TL GG+ E
Sbjct: 738 PMALPSEHGLEQPSHTPP---QTPTPPSTPPLGKQNPSLPAPQ-TLAGGNP-------ET 786
Query: 119 EGQRRGCVEKQPRPTPTPACELTGLAPAPPTPPPAWWRWARTGTRAMGGAASTGSAPTAG 178
G + PRP P P P PP PP G + G ++ T +APTA
Sbjct: 787 AQPHAGTL---PRPRPVPKPRNRPSVPPPPQPP---------GVHSAGDSSLTNTAPTAS 834
Query: 179 R 179
+
Sbjct: 835 K 835
Score = 30.8 bits (68), Expect = 0.74
Identities = 24/102 (23%), Positives = 36/102 (35%), Gaps = 8/102 (7%)
Query: 8 AAGHPTPGGPASARRAHSGRPHQA--------RRHPAAWGLPVRRPSHPPRPTTSSWANG 59
A+G P A + + G+PH A RR +P +PP ++
Sbjct: 598 ASGQNQPQAAAGSHQLSMGQPHNAAGPSPHTLRRAVKKPAPAPPKPGNPPPGHPGGQSSS 657
Query: 60 SNRQHPAELSVQLPANPPPGLNQGCIRAASAPRWVPTLTVPQ 101
QHP LS + P P Q + P L+ P+
Sbjct: 658 GTSQHPPSLSPKPPTRSPSPPTQHTGQPPGQPSAPSQLSAPR 699
Score = 29.3 bits (64), Expect = 2.2
Identities = 43/155 (27%), Positives = 57/155 (36%), Gaps = 21/155 (13%)
Query: 6 ESAAGHPTPGGPASARRAHSGRPHQARRHPAAWGLPVRRPSHPPRPTTSSWANGSNRQHP 65
ES++G T P+SA G P P PV P S A+G N+
Sbjct: 550 ESSSGGGTV--PSSAGILEQG-PSPGDGSPPKPKDPVSAAVPAPGRNNSQIASGQNQPQA 606
Query: 66 A----ELSVQLPANP----PPGLNQGCIRAASAPRWVPTLTVPQATLPGGSQGHRRCRGE 117
A +LS+ P N P L + + A AP P P PGG
Sbjct: 607 AAGSHQLSMGQPHNAAGPSPHTLRRAVKKPAPAP---PKPGNPPPGHPGGQSS------S 657
Query: 118 GEGQRRGCVE-KQPRPTPTPACELTGLAPAPPTPP 151
G Q + K P +P+P + TG P P+ P
Sbjct: 658 GTSQHPPSLSPKPPTRSPSPPTQHTGQPPGQPSAP 692
>gi|54860105 nadrin isoform 2 [Homo sapiens]
Length = 803
Score = 44.3 bits (103), Expect = 6e-05
Identities = 51/181 (28%), Positives = 69/181 (38%), Gaps = 43/181 (23%)
Query: 10 GHPTPGGPASARRAHSGR--PHQARRHPAAWGLPVRRPSHPPRPTTSSWANGSNRQHP-- 65
G P+ SA R +S P QA HP P PP T N Q P
Sbjct: 609 GQPSAPSQLSAPRRYSSSLSPIQAPNHP---------PPQPPTQATPLMHTKPNSQGPPN 659
Query: 66 -----AELSVQLPANPPPGLNQGCIRAASAP--RWVPTLTVPQATLPGGSQGHRRCRGEG 118
+E ++ P++ PP Q ++ P + P+L PQ TL GG+ E
Sbjct: 660 PMALPSEHGLEQPSHTPP---QTPTPPSTPPLGKQNPSLPAPQ-TLAGGNP-------ET 708
Query: 119 EGQRRGCVEKQPRPTPTPACELTGLAPAPPTPPPAWWRWARTGTRAMGGAASTGSAPTAG 178
G + PRP P P P PP PP G + G ++ T +APTA
Sbjct: 709 AQPHAGTL---PRPRPVPKPRNRPSVPPPPQPP---------GVHSAGDSSLTNTAPTAS 756
Query: 179 R 179
+
Sbjct: 757 K 757
Score = 30.8 bits (68), Expect = 0.74
Identities = 24/102 (23%), Positives = 36/102 (35%), Gaps = 8/102 (7%)
Query: 8 AAGHPTPGGPASARRAHSGRPHQA--------RRHPAAWGLPVRRPSHPPRPTTSSWANG 59
A+G P A + + G+PH A RR +P +PP ++
Sbjct: 520 ASGQNQPQAAAGSHQLSMGQPHNAAGPSPHTLRRAVKKPAPAPPKPGNPPPGHPGGQSSS 579
Query: 60 SNRQHPAELSVQLPANPPPGLNQGCIRAASAPRWVPTLTVPQ 101
QHP LS + P P Q + P L+ P+
Sbjct: 580 GTSQHPPSLSPKPPTRSPSPPTQHTGQPPGQPSAPSQLSAPR 621
Score = 28.9 bits (63), Expect = 2.8
Identities = 40/164 (24%), Positives = 60/164 (36%), Gaps = 38/164 (23%)
Query: 17 PASARRAHSGRPHQA----RRHPAAWGL---PVRRPSHPPRP-------------TTSSW 56
P+S H+G + R+ PA+ + + + PP+P S
Sbjct: 460 PSSNHSFHTGNDSDSGTLERKRPASMAVMEGDLVKKESPPKPKDPVSAAVPAPGRNNSQI 519
Query: 57 ANGSNRQHPA----ELSVQLPANP----PPGLNQGCIRAASAPRWVPTLTVPQATLPGGS 108
A+G N+ A +LS+ P N P L + + A AP P P PGG
Sbjct: 520 ASGQNQPQAAAGSHQLSMGQPHNAAGPSPHTLRRAVKKPAPAP---PKPGNPPPGHPGGQ 576
Query: 109 QGHRRCRGEGEGQRRGCVE-KQPRPTPTPACELTGLAPAPPTPP 151
G Q + K P +P+P + TG P P+ P
Sbjct: 577 SS------SGTSQHPPSLSPKPPTRSPSPPTQHTGQPPGQPSAP 614
>gi|239747300 PREDICTED: hypothetical protein XP_002346414 [Homo
sapiens]
Length = 470
Score = 43.9 bits (102), Expect = 8e-05
Identities = 54/186 (29%), Positives = 67/186 (36%), Gaps = 15/186 (8%)
Query: 3 LAEESAAGHPTPGGPASARRAH-SGRPHQAR--RHPAAWGLPVRRPSHPPRPTTSSWANG 59
LA+ + P G A RRAH +G P + R R AA GLP P S+
Sbjct: 103 LAQPPGSRAPLQVGGAPRRRAHLTGGPPRRRPPRLAAAHGLPASEA--PGLRPDSARTRL 160
Query: 60 SNRQHPAELSVQLPANPPPGL-NQGCIRAASAPRWVPTLTVPQATLPGGSQGHRR----- 113
R A L LP P GL GC R P + P G + H R
Sbjct: 161 RLRLASARLPRGLPPAPAAGLWRAGCTRLRPLLLQPPPMLSPGLAQSPGVELHARAHSRA 220
Query: 114 --CRGEGEGQRRGCVEKQPRPTPTPACELTGLAPAPPTPPPAWWRWARTGTRAMGGAAST 171
C G GEG V +P +P + P P P + G++A A T
Sbjct: 221 HTCAGGGEGDPGPIVGGRPENEDSP--RFPDVPTRPAGPSPFYCEGTEPGSQAWSARAGT 278
Query: 172 GSAPTA 177
S TA
Sbjct: 279 ASWETA 284
>gi|239741124 PREDICTED: hypothetical protein XP_002342114 [Homo
sapiens]
Length = 470
Score = 43.9 bits (102), Expect = 8e-05
Identities = 54/186 (29%), Positives = 67/186 (36%), Gaps = 15/186 (8%)
Query: 3 LAEESAAGHPTPGGPASARRAH-SGRPHQAR--RHPAAWGLPVRRPSHPPRPTTSSWANG 59
LA+ + P G A RRAH +G P + R R AA GLP P S+
Sbjct: 103 LAQPPGSRAPLQVGGAPRRRAHLTGGPPRRRPPRLAAAHGLPASEA--PGLRPDSARTRL 160
Query: 60 SNRQHPAELSVQLPANPPPGL-NQGCIRAASAPRWVPTLTVPQATLPGGSQGHRR----- 113
R A L LP P GL GC R P + P G + H R
Sbjct: 161 RLRLASARLPRGLPPAPAAGLWRAGCTRLRPLLLQPPPMLSPGLAQSPGVELHARAHSRA 220
Query: 114 --CRGEGEGQRRGCVEKQPRPTPTPACELTGLAPAPPTPPPAWWRWARTGTRAMGGAAST 171
C G GEG V +P +P + P P P + G++A A T
Sbjct: 221 HTCAGGGEGDPGPIVGGRPENEDSP--RFPDVPTRPAGPSPFYCEGTEPGSQAWSARAGT 278
Query: 172 GSAPTA 177
S TA
Sbjct: 279 ASWETA 284
>gi|113416879 PREDICTED: hypothetical protein [Homo sapiens]
Length = 175
Score = 43.1 bits (100), Expect = 1e-04
Identities = 49/182 (26%), Positives = 62/182 (34%), Gaps = 22/182 (12%)
Query: 18 ASARRAHS--GRPHQ----ARRHPAAWGLPVRRPSHPPRPTTSSWANGSNRQHPAELSVQ 71
AS RR GRPH ARR P +G +R P PPRP +HP
Sbjct: 5 ASGRRQGRARGRPHSQVSLARRAPLMFGPGLRDPP-PPRPAPPRPGEEPGNRHP------ 57
Query: 72 LPANPPPGL--NQGCIRAASAPRWVPTLTVPQATLPGGSQGHRRCRGEGEGQRRGCVEKQ 129
PPP + G RA L P PG + ++R +
Sbjct: 58 ----PPPAARTHPGSCRARCPSPAAGGLRGPWTAAPGRQRADEGAAAARPERQRVWARRL 113
Query: 130 PRPTPTPACELTGLAPAPPTPPPAWWRWARTGTRAMGGAASTGSAPTAGRAP-AVLGPGP 188
P PA L PP PPP R + G + + P+ AP + P P
Sbjct: 114 PGSAAAPAPGRDALRLPPPPPPPP--ERPRLPPAGLAGGPADSAPPSPAPAPRSRPAPRP 171
Query: 189 PH 190
H
Sbjct: 172 GH 173
>gi|13699803 WAS protein family, member 3 [Homo sapiens]
Length = 502
Score = 42.7 bits (99), Expect = 2e-04
Identities = 42/153 (27%), Positives = 51/153 (33%), Gaps = 26/153 (16%)
Query: 8 AAGHPTPGGPASARRAHSGRPHQARRHPAAWGLPVRRPSHPPRPTTSSWANGSNRQHPAE 67
AAG P GPAS H RP A A P ++P PP P + S PA+
Sbjct: 268 AAGDVPPHGPASQAAEHEYRPPSASARHMALNRP-QQPPPPPPPQAPEGSQASAPMAPAD 326
Query: 68 ---LSVQL-----PANPPPGLNQGCIRAASAPRWVPTLTVPQATLPGGSQGHRRCRGEGE 119
L Q+ P+ PPP I +A P Q P +
Sbjct: 327 YGMLPAQIIEYYNPSGPPPPPPPPVIPSAQTAFVSPLQMPMQPPFPASAS---------- 376
Query: 120 GQRRGCVEKQPRPTPTPACELTGLAPAPPTPPP 152
P P+ L AP PP PPP
Sbjct: 377 -------STHAAPPHPPSTGLLVTAPPPPGPPP 402
Score = 30.4 bits (67), Expect = 0.97
Identities = 24/73 (32%), Positives = 30/73 (41%), Gaps = 14/73 (19%)
Query: 14 PGGPASARRAHSGRPHQARRHPAAWGL---------PVRRPSHPPRPTTSSWANGSNRQH 64
P PASA H+ PH P + GL P P PP P +S ++ +
Sbjct: 369 PPFPASASSTHAAPPH-----PPSTGLLVTAPPPPGPPPPPPGPPGPGSSLSSSPMHGPP 423
Query: 65 PAELSVQLPANPP 77
AE Q PA PP
Sbjct: 424 VAEAKRQEPAQPP 436
>gi|239752764 PREDICTED: hypothetical protein [Homo sapiens]
Length = 370
Score = 42.0 bits (97), Expect = 3e-04
Identities = 68/253 (26%), Positives = 83/253 (32%), Gaps = 69/253 (27%)
Query: 3 LAEESAAGHPTPGGPASARRAH-SGRPHQAR--RHPAAWGLPVR-----RPSH------- 47
LA+ + P G A RRAH +G P + R R AA GLP RP
Sbjct: 103 LAQPPGSRAPLQVGGAPRRRAHLTGGPPRRRPPRLAAAHGLPASEAPGLRPDSARTRLRL 162
Query: 48 -----------PPRPTTSSWANGSNRQHPAELSVQLPANPPPGLNQG----------CIR 86
PP P W G R P L +Q P PGL Q +
Sbjct: 163 RLASARLPRGLPPAPAAGLWRAGCTRLRP--LLLQPPPMLSPGLAQSPGVELHARTLSLP 220
Query: 87 AASAPRWVPTLTVPQATLPGG------------SQGHRRC----RGEGEGQRRGCVEKQP 130
A S +P P A P ++ H R RG GEG V +P
Sbjct: 221 APSPAPCLPPPAPPAARTPSAHSPAHTHFTLTLAEAHTRALTPARGGGEGDPGPIVGGRP 280
Query: 131 RPTPTPACELTGLAPAPPTPPPAWWR--WARTGTRAMGGAASTGSAPTA----------- 177
+ A + + AP P P A R AR G R + A P+
Sbjct: 281 ENEDSLASQTSPPAPPAPVPSTARARSPGARRGARELAPRAGRRRQPSGRTSWRRRARRE 340
Query: 178 --GRAPAVLGPGP 188
R PAV G P
Sbjct: 341 QRDREPAVCGAWP 353
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 41.6 bits (96), Expect = 4e-04
Identities = 52/189 (27%), Positives = 75/189 (39%), Gaps = 22/189 (11%)
Query: 14 PGGPASARRAHS-GRPHQARRHPAAWGLPVRRPSHPPRPTTSSWANGSNRQHPAELSV-- 70
P GP A S G P+ ++HP P P +SS A+G+ P V
Sbjct: 232 PMGPKGGGAASSVGGPNGGKQHP---------PPTTPISVSSSGASGAPPTKPPTTPVGG 282
Query: 71 -QLPANPPPGLNQGCIRAASAPRWVPTLTVPQATLPG-GSQ---GHR---RCRGEGEGQR 122
LP+ PPP P + L A+ PG G+Q GH G+G G
Sbjct: 283 GNLPSAPPPANFPHVTPNLPPPPALRPLNNASASPPGLGAQPLPGHLPSPHAMGQGMGGL 342
Query: 123 RGCVEKQPRPTPTPACELTGLAPAPPTPPPAWWRWARTGTRAMGGAASTGSAPTAGRAPA 182
EK P P+P L + + P PP + + + + A ++S+ S+ +A PA
Sbjct: 343 PPGPEKGPTLAPSPH-SLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPA 401
Query: 183 VLG-PGPPH 190
P PH
Sbjct: 402 SQALPSYPH 410
Score = 31.6 bits (70), Expect = 0.43
Identities = 51/192 (26%), Positives = 66/192 (34%), Gaps = 40/192 (20%)
Query: 13 TPGGPASARRAHSGRPHQARR--HPAAWGLPVRRPSHPPRPTTSSWANGSNRQHPA--EL 68
+PG + + SG R HP P+ PS P +T S HP+
Sbjct: 137 SPGSVENDSDSSSGLSQGPARPYHPP----PLFPPSPQPPDSTPRQPEASFEPHPSVTPT 192
Query: 69 SVQLPANPPPGLNQGCIRAASAPRWVPTLTVPQATL-PGGSQGHRRCRGEGEGQRRGCV- 126
P PP R AP P P L PGG+ G G G + G
Sbjct: 193 GYHAPMEPPTS------RMFQAPPGAPP---PHPQLYPGGTGGV--LSGPPMGPKGGGAA 241
Query: 127 ---------EKQPRPTPTPACELTGLAPAPPTPPPAWWRWARTGTRAMGGAASTGSAPTA 177
++ P PT + +G + APPT PP T +GG + SAP
Sbjct: 242 SSVGGPNGGKQHPPPTTPISVSSSGASGAPPTKPP---------TTPVGG-GNLPSAPPP 291
Query: 178 GRAPAVLGPGPP 189
P V PP
Sbjct: 292 ANFPHVTPNLPP 303
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 41.6 bits (96), Expect = 4e-04
Identities = 52/189 (27%), Positives = 75/189 (39%), Gaps = 22/189 (11%)
Query: 14 PGGPASARRAHS-GRPHQARRHPAAWGLPVRRPSHPPRPTTSSWANGSNRQHPAELSV-- 70
P GP A S G P+ ++HP P P +SS A+G+ P V
Sbjct: 232 PMGPKGGGAASSVGGPNGGKQHP---------PPTTPISVSSSGASGAPPTKPPTTPVGG 282
Query: 71 -QLPANPPPGLNQGCIRAASAPRWVPTLTVPQATLPG-GSQ---GHR---RCRGEGEGQR 122
LP+ PPP P + L A+ PG G+Q GH G+G G
Sbjct: 283 GNLPSAPPPANFPHVTPNLPPPPALRPLNNASASPPGLGAQPLPGHLPSPHAMGQGMGGL 342
Query: 123 RGCVEKQPRPTPTPACELTGLAPAPPTPPPAWWRWARTGTRAMGGAASTGSAPTAGRAPA 182
EK P P+P L + + P PP + + + + A ++S+ S+ +A PA
Sbjct: 343 PPGPEKGPTLAPSPH-SLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPA 401
Query: 183 VLG-PGPPH 190
P PH
Sbjct: 402 SQALPSYPH 410
Score = 31.6 bits (70), Expect = 0.43
Identities = 51/192 (26%), Positives = 66/192 (34%), Gaps = 40/192 (20%)
Query: 13 TPGGPASARRAHSGRPHQARR--HPAAWGLPVRRPSHPPRPTTSSWANGSNRQHPA--EL 68
+PG + + SG R HP P+ PS P +T S HP+
Sbjct: 137 SPGSVENDSDSSSGLSQGPARPYHPP----PLFPPSPQPPDSTPRQPEASFEPHPSVTPT 192
Query: 69 SVQLPANPPPGLNQGCIRAASAPRWVPTLTVPQATL-PGGSQGHRRCRGEGEGQRRGCV- 126
P PP R AP P P L PGG+ G G G + G
Sbjct: 193 GYHAPMEPPTS------RMFQAPPGAPP---PHPQLYPGGTGGV--LSGPPMGPKGGGAA 241
Query: 127 ---------EKQPRPTPTPACELTGLAPAPPTPPPAWWRWARTGTRAMGGAASTGSAPTA 177
++ P PT + +G + APPT PP T +GG + SAP
Sbjct: 242 SSVGGPNGGKQHPPPTTPISVSSSGASGAPPTKPP---------TTPVGG-GNLPSAPPP 291
Query: 178 GRAPAVLGPGPP 189
P V PP
Sbjct: 292 ANFPHVTPNLPP 303
>gi|39812378 RAN binding protein 9 [Homo sapiens]
Length = 729
Score = 41.2 bits (95), Expect = 5e-04
Identities = 47/145 (32%), Positives = 52/145 (35%), Gaps = 34/145 (23%)
Query: 48 PPRPTTSSWANGSNRQHPAELS----VQLPANPPPGLNQGCIRAASAPRWVPTLTVPQAT 103
PP P + PA L+ V LPA PP ++ G A S
Sbjct: 7 PPPPQQQQQQQQLSPPPPAALAPVSGVVLPA--PPAVSAGSSPAGS-------------- 50
Query: 104 LPGGSQGHRRCRGEGEGQRRGCVEKQPRPTPTPACELTGLAPAPPTPPPAWWRWARTGTR 163
PGG G GEG G + P P P PA T P PP PPP A
Sbjct: 51 -PGGGAG-----GEGLGAAAAALLLHPPPPPPPA---TAAPPPPPPPPPP---PASAAAP 98
Query: 164 AMGGAASTGSAPTAGRAPAVLGPGP 188
A G A G A AG PA P P
Sbjct: 99 ASGPPAPPGLA--AGPGPAGGAPTP 121
>gi|239749251 PREDICTED: similar to hCG2042508 [Homo sapiens]
Length = 460
Score = 40.4 bits (93), Expect = 0.001
Identities = 55/184 (29%), Positives = 63/184 (34%), Gaps = 33/184 (17%)
Query: 15 GGPASARRAHSGRPHQARRHPAAWGLPVRRPSHPPRPTTSSWANGSN-------RQHPAE 67
G S RA PH HP R + P TS + +
Sbjct: 95 GSVPSEGRATPPLPHPGDHHPR------HRKNRGPSAGTSQLGKKTQCRSLFLRTKGLCA 148
Query: 68 LSVQLPANPPPGLNQGCIRAASAPRWVPTLTVPQATLPGGSQGHRRCRGEGEGQRRGCVE 127
L ++LP PPP L +G RA V P GS G R Q
Sbjct: 149 LLLELPPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPA 208
Query: 128 KQPRPTPTPACELTGLAPAPPTPPPAWWRWARTGTRAMGGAASTGSAPTAGRAPAVLG-P 186
QP PT APP PPA+ +R G R G A S GS P PA L P
Sbjct: 209 PQPGPT------------APPARPPAY--ESREGPR--GRAESRGSGPA---QPAHLPLP 249
Query: 187 GPPH 190
GP H
Sbjct: 250 GPAH 253
>gi|239743343 PREDICTED: similar to hCG2042508 [Homo sapiens]
Length = 460
Score = 40.4 bits (93), Expect = 0.001
Identities = 55/184 (29%), Positives = 63/184 (34%), Gaps = 33/184 (17%)
Query: 15 GGPASARRAHSGRPHQARRHPAAWGLPVRRPSHPPRPTTSSWANGSN-------RQHPAE 67
G S RA PH HP R + P TS + +
Sbjct: 95 GSVPSEGRATPPLPHPGDHHPR------HRKNRGPSAGTSQLGKKTQCRSLFLRTKGLCA 148
Query: 68 LSVQLPANPPPGLNQGCIRAASAPRWVPTLTVPQATLPGGSQGHRRCRGEGEGQRRGCVE 127
L ++LP PPP L +G RA V P GS G R Q
Sbjct: 149 LLLELPPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPA 208
Query: 128 KQPRPTPTPACELTGLAPAPPTPPPAWWRWARTGTRAMGGAASTGSAPTAGRAPAVLG-P 186
QP PT APP PPA+ +R G R G A S GS P PA L P
Sbjct: 209 PQPGPT------------APPARPPAY--ESREGPR--GRAESRGSGPA---QPAHLPLP 249
Query: 187 GPPH 190
GP H
Sbjct: 250 GPAH 253
>gi|239509031 PREDICTED: similar to hCG2042508 [Homo sapiens]
Length = 460
Score = 40.4 bits (93), Expect = 0.001
Identities = 55/184 (29%), Positives = 63/184 (34%), Gaps = 33/184 (17%)
Query: 15 GGPASARRAHSGRPHQARRHPAAWGLPVRRPSHPPRPTTSSWANGSN-------RQHPAE 67
G S RA PH HP R + P TS + +
Sbjct: 95 GSVPSEGRATPPLPHPGDHHPR------HRKNRGPSAGTSQLGKKTQCRSLFLRTKGLCA 148
Query: 68 LSVQLPANPPPGLNQGCIRAASAPRWVPTLTVPQATLPGGSQGHRRCRGEGEGQRRGCVE 127
L ++LP PPP L +G RA V P GS G R Q
Sbjct: 149 LLLELPPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPA 208
Query: 128 KQPRPTPTPACELTGLAPAPPTPPPAWWRWARTGTRAMGGAASTGSAPTAGRAPAVLG-P 186
QP PT APP PPA+ +R G R G A S GS P PA L P
Sbjct: 209 PQPGPT------------APPARPPAY--ESREGPR--GRAESRGSGPA---QPAHLPLP 249
Query: 187 GPPH 190
GP H
Sbjct: 250 GPAH 253
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.132 0.450
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,120,485
Number of Sequences: 37866
Number of extensions: 959397
Number of successful extensions: 6755
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 180
Number of HSP's successfully gapped in prelim test: 765
Number of HSP's that attempted gapping in prelim test: 5172
Number of HSP's gapped (non-prelim): 2018
length of query: 192
length of database: 18,247,518
effective HSP length: 97
effective length of query: 95
effective length of database: 14,574,516
effective search space: 1384579020
effective search space used: 1384579020
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.