Search of human proteins with 239756669

Search of human proteins with 239756669

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239756669 PREDICTED: hypothetical protein [Homo sapiens]
         (236 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239756669 PREDICTED: hypothetical protein [Homo sapiens]           493   e-140
gi|239751161 PREDICTED: hypothetical protein XP_002347738 [Homo ...   493   e-140
gi|56118221 amyloid beta (A4) precursor protein-binding, family ...    39   0.003
gi|169165075 PREDICTED: hypothetical protein [Homo sapiens]            35   0.043
gi|58761544 amine oxidase (flavin containing) domain 2 isoform a...    35   0.056
gi|58761546 amine oxidase (flavin containing) domain 2 isoform b...    35   0.056
gi|215277017 protein tyrosine phosphatase, non-receptor type 18 ...    33   0.16 
gi|18375655 protein tyrosine phosphatase, non-receptor type 18 i...    33   0.16 
gi|239750574 PREDICTED: hypothetical protein [Homo sapiens]            32   0.48 
gi|169205732 PREDICTED: hypothetical protein [Homo sapiens]            32   0.48 
gi|122937239 zinc finger CCCH-type domain containing 5 [Homo sap...    32   0.48 
gi|90903231 huntingtin [Homo sapiens]                                  32   0.62 
gi|31657109 zinc finger protein 282 [Homo sapiens]                     32   0.62 
gi|239747516 PREDICTED: hypothetical protein [Homo sapiens]            31   0.81 
gi|239741753 PREDICTED: hypothetical protein [Homo sapiens]            31   0.81 
gi|239741394 PREDICTED: hypothetical protein XP_002342192 [Homo ...    31   0.81 
gi|155722994 zinc finger CCCH-type containing 3 [Homo sapiens]         31   0.81 
gi|169171388 PREDICTED: hypothetical protein [Homo sapiens]            31   1.1  
gi|239749096 PREDICTED: hypothetical protein [Homo sapiens]            31   1.1  
gi|239743123 PREDICTED: hypothetical protein [Homo sapiens]            31   1.1  
gi|14249452 zinc finger CCCH-type containing 10 [Homo sapiens]         31   1.1  
gi|16753221 cadherin 22 precursor [Homo sapiens]                       31   1.1  
gi|239757081 PREDICTED: hypothetical protein LOC100127987 [Homo ...    30   1.4  
gi|169213239 PREDICTED: hypothetical protein LOC100127987 [Homo ...    30   1.4  
gi|169212748 PREDICTED: hypothetical protein LOC100127987 [Homo ...    30   1.4  
gi|148746211 NK2 transcription factor related, locus 3 [Homo sap...    30   1.4  
gi|17402900 far upstream element-binding protein [Homo sapiens]        30   1.4  
gi|37537558 nuclear apoptosis inducing factor 1 [Homo sapiens]         30   1.4  
gi|38570105 Ras-interacting protein 1 [Homo sapiens]                   30   1.4  
gi|239757861 PREDICTED: similar to armadillo repeat containing, ...    30   1.8  

>gi|239756669 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 236

 Score =  493 bits (1269), Expect = e-140
 Identities = 236/236 (100%), Positives = 236/236 (100%)

Query: 1   MEPPDLPFQGARAGSPPVSPGLFLGAAVGSGQTVGGSQWRMFPAKGMSWIPGAWSAWLAA 60
           MEPPDLPFQGARAGSPPVSPGLFLGAAVGSGQTVGGSQWRMFPAKGMSWIPGAWSAWLAA
Sbjct: 1   MEPPDLPFQGARAGSPPVSPGLFLGAAVGSGQTVGGSQWRMFPAKGMSWIPGAWSAWLAA 60

Query: 61  PFTDTTDRKTWVVHEQEVQQAQPGLRQPWELVLQVVVGLLPEAVLADQWQLGKALWEAGA 120
           PFTDTTDRKTWVVHEQEVQQAQPGLRQPWELVLQVVVGLLPEAVLADQWQLGKALWEAGA
Sbjct: 61  PFTDTTDRKTWVVHEQEVQQAQPGLRQPWELVLQVVVGLLPEAVLADQWQLGKALWEAGA 120

Query: 121 EAQRAWARAGAAGAEGGVGTGGGCGSAQDAHRPDVLTGRAQQLHDQVDLVDLGSAGEKRP 180
           EAQRAWARAGAAGAEGGVGTGGGCGSAQDAHRPDVLTGRAQQLHDQVDLVDLGSAGEKRP
Sbjct: 121 EAQRAWARAGAAGAEGGVGTGGGCGSAQDAHRPDVLTGRAQQLHDQVDLVDLGSAGEKRP 180

Query: 181 VRQQLGQYAAHSPAENSGPHCGQTSADPASARNRGPDCSQTFADPASVRHAGSGTL 236
           VRQQLGQYAAHSPAENSGPHCGQTSADPASARNRGPDCSQTFADPASVRHAGSGTL
Sbjct: 181 VRQQLGQYAAHSPAENSGPHCGQTSADPASARNRGPDCSQTFADPASVRHAGSGTL 236


>gi|239751161 PREDICTED: hypothetical protein XP_002347738 [Homo
           sapiens]
          Length = 236

 Score =  493 bits (1269), Expect = e-140
 Identities = 236/236 (100%), Positives = 236/236 (100%)

Query: 1   MEPPDLPFQGARAGSPPVSPGLFLGAAVGSGQTVGGSQWRMFPAKGMSWIPGAWSAWLAA 60
           MEPPDLPFQGARAGSPPVSPGLFLGAAVGSGQTVGGSQWRMFPAKGMSWIPGAWSAWLAA
Sbjct: 1   MEPPDLPFQGARAGSPPVSPGLFLGAAVGSGQTVGGSQWRMFPAKGMSWIPGAWSAWLAA 60

Query: 61  PFTDTTDRKTWVVHEQEVQQAQPGLRQPWELVLQVVVGLLPEAVLADQWQLGKALWEAGA 120
           PFTDTTDRKTWVVHEQEVQQAQPGLRQPWELVLQVVVGLLPEAVLADQWQLGKALWEAGA
Sbjct: 61  PFTDTTDRKTWVVHEQEVQQAQPGLRQPWELVLQVVVGLLPEAVLADQWQLGKALWEAGA 120

Query: 121 EAQRAWARAGAAGAEGGVGTGGGCGSAQDAHRPDVLTGRAQQLHDQVDLVDLGSAGEKRP 180
           EAQRAWARAGAAGAEGGVGTGGGCGSAQDAHRPDVLTGRAQQLHDQVDLVDLGSAGEKRP
Sbjct: 121 EAQRAWARAGAAGAEGGVGTGGGCGSAQDAHRPDVLTGRAQQLHDQVDLVDLGSAGEKRP 180

Query: 181 VRQQLGQYAAHSPAENSGPHCGQTSADPASARNRGPDCSQTFADPASVRHAGSGTL 236
           VRQQLGQYAAHSPAENSGPHCGQTSADPASARNRGPDCSQTFADPASVRHAGSGTL
Sbjct: 181 VRQQLGQYAAHSPAENSGPHCGQTSADPASARNRGPDCSQTFADPASVRHAGSGTL 236


>gi|56118221 amyloid beta (A4) precursor protein-binding, family B,
           member 1 interacting protein [Homo sapiens]
          Length = 666

 Score = 39.3 bits (90), Expect = 0.003
 Identities = 40/144 (27%), Positives = 57/144 (39%), Gaps = 19/144 (13%)

Query: 107 DQWQLGKALWEAGAEA----QRAWARAGAAGAEGGVGTGGGCGSAQDAHRPDVLT----G 158
           +QW +G  + + G       QRA A+AG A     +GT      AQ +  P   T    G
Sbjct: 408 NQWVMGIRIAKYGKTLYDNYQRAVAKAGLASRWTNLGTVNAAAPAQPSTGPKTGTTQPNG 467

Query: 159 RAQQLHDQVDLV------DLGSAGEKRPVRQQLGQYAAHSPAENSGPHCGQTSADPASAR 212
           +  Q    V  V         ++ +K+P    LG +  H PA    PH  ++S  P    
Sbjct: 468 QIPQATHSVSAVLQEAQRHAETSKDKKPA---LGNH--HDPAVPRAPHAPKSSLPPPPPV 522

Query: 213 NRGPDCSQTFADPASVRHAGSGTL 236
            R  D S + A P   +  G G L
Sbjct: 523 RRSSDTSGSPATPLKAKGTGGGGL 546


>gi|169165075 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 147

 Score = 35.4 bits (80), Expect = 0.043
 Identities = 28/71 (39%), Positives = 35/71 (49%), Gaps = 3/71 (4%)

Query: 80  QAQPGLRQPWELVLQVVVGLLPEAVLADQWQLGKALWEAGAEAQRA--WARAGAAG-AEG 136
           QA+PG+   W   L+V   L     LA+ WQ   A  EA   AQ+A   A+ G AG A G
Sbjct: 17  QARPGVNSAWLAALEVRQHLAAGLGLAEGWQALLAALEAVRAAQQAPEEAQLGIAGEAGG 76

Query: 137 GVGTGGGCGSA 147
           G+G   G   A
Sbjct: 77  GLGLRRGAAVA 87


>gi|58761544 amine oxidase (flavin containing) domain 2 isoform a
           [Homo sapiens]
          Length = 876

 Score = 35.0 bits (79), Expect = 0.056
 Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 14/97 (14%)

Query: 120 AEAQRAWARAGAAGAEGGVGTGGGCGSAQD-AHRPDVLTGRAQQLHDQVDLVDLGSAGEK 178
           A A  A A A A G E G GT GG  +  + A +P  L+G A+        V  G+ GE+
Sbjct: 7   AAAAAAAAAAAATGTEAGPGTAGGSENGSEVAAQPAGLSGPAE--------VGPGAVGER 58

Query: 179 RPVRQQLGQYA----AHSPAENSGPHCGQTSADPASA 211
            P +++  + +       P  ++GP  G T   P SA
Sbjct: 59  TPRKKEPPRASPPGGLAEPPGSAGPQAGPTVV-PGSA 94


>gi|58761546 amine oxidase (flavin containing) domain 2 isoform b
           [Homo sapiens]
          Length = 852

 Score = 35.0 bits (79), Expect = 0.056
 Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 14/97 (14%)

Query: 120 AEAQRAWARAGAAGAEGGVGTGGGCGSAQD-AHRPDVLTGRAQQLHDQVDLVDLGSAGEK 178
           A A  A A A A G E G GT GG  +  + A +P  L+G A+        V  G+ GE+
Sbjct: 7   AAAAAAAAAAAATGTEAGPGTAGGSENGSEVAAQPAGLSGPAE--------VGPGAVGER 58

Query: 179 RPVRQQLGQYA----AHSPAENSGPHCGQTSADPASA 211
            P +++  + +       P  ++GP  G T   P SA
Sbjct: 59  TPRKKEPPRASPPGGLAEPPGSAGPQAGPTVV-PGSA 94


>gi|215277017 protein tyrosine phosphatase, non-receptor type 18
           isoform 2 [Homo sapiens]
          Length = 353

 Score = 33.5 bits (75), Expect = 0.16
 Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 1/52 (1%)

Query: 112 GKALWEAGAEAQRAWARAGA-AGAEGGVGTGGGCGSAQDAHRPDVLTGRAQQ 162
           G A+ +  A  Q+  A AGA +G + G GTG G  SA++A     +T RAQ+
Sbjct: 240 GHAMADTYAVVQKRGAPAGAGSGTQTGTGTGTGARSAEEAPLYSKVTPRAQR 291


>gi|18375655 protein tyrosine phosphatase, non-receptor type 18
           isoform 1 [Homo sapiens]
          Length = 460

 Score = 33.5 bits (75), Expect = 0.16
 Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 1/52 (1%)

Query: 112 GKALWEAGAEAQRAWARAGA-AGAEGGVGTGGGCGSAQDAHRPDVLTGRAQQ 162
           G A+ +  A  Q+  A AGA +G + G GTG G  SA++A     +T RAQ+
Sbjct: 347 GHAMADTYAVVQKRGAPAGAGSGTQTGTGTGTGARSAEEAPLYSKVTPRAQR 398


>gi|239750574 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 1297

 Score = 32.0 bits (71), Expect = 0.48
 Identities = 33/119 (27%), Positives = 41/119 (34%), Gaps = 6/119 (5%)

Query: 120 AEAQRAWARAGAAGAEGGVGTGGGCGSAQDAHRPDVLTGRAQQLHDQVDLVDLGSAGEKR 179
           A  +R  ARA AA    G G GGG    +  H       +      Q  L    +A   +
Sbjct: 854 AGRRRVGARAVAAAGRQGAGAGGGGRRVRHGHGHGAAVLQRAPCRQQRHLAPAAAAAAAQ 913

Query: 180 PVRQQLGQYAAHSPAENSGP-HCGQTSADPASARNRGPDCSQTFADPASV---RHAGSG 234
            VR   G+  AH P     P H  +  A    +R R        A PA     R  G G
Sbjct: 914 GVRAAQGR--AHRPGAQGAPSHRHRPGARGRRSRRRAAVALAGGAHPARAALGRRRGGG 970


>gi|169205732 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 1297

 Score = 32.0 bits (71), Expect = 0.48
 Identities = 33/119 (27%), Positives = 41/119 (34%), Gaps = 6/119 (5%)

Query: 120 AEAQRAWARAGAAGAEGGVGTGGGCGSAQDAHRPDVLTGRAQQLHDQVDLVDLGSAGEKR 179
           A  +R  ARA AA    G G GGG    +  H       +      Q  L    +A   +
Sbjct: 854 AGRRRVGARAVAAAGRQGAGAGGGGRRVRHGHGHGAAVLQRAPCRQQRHLAPAAAAAAAQ 913

Query: 180 PVRQQLGQYAAHSPAENSGP-HCGQTSADPASARNRGPDCSQTFADPASV---RHAGSG 234
            VR   G+  AH P     P H  +  A    +R R        A PA     R  G G
Sbjct: 914 GVRAAQGR--AHRPGAQGAPSHRHRPGARGRRSRRRAAVALAGGAHPARAALGRRRGGG 970


>gi|122937239 zinc finger CCCH-type domain containing 5 [Homo
           sapiens]
          Length = 886

 Score = 32.0 bits (71), Expect = 0.48
 Identities = 42/172 (24%), Positives = 67/172 (38%), Gaps = 39/172 (22%)

Query: 19  SPGLFLGAAVGSGQT----VGGSQWRMFPAKGMSWIPGAWSAWLAAPFTDTTDRKTWVVH 74
           S   FLG +   G      +  S W  F +   S  PG   A+L+ P      R      
Sbjct: 674 SENTFLGTSASHGSLGLNGMNSSIWEHFASGSFS--PGTSPAFLSGPGAAELARL----- 726

Query: 75  EQEVQQAQPGLRQPWELVLQVVVGLLPEAVLADQWQLGKALWEAGA-EAQRAWARAGAAG 133
            QE+ +A   ++Q WE                + W+  K   +A   EA+ A  RA AAG
Sbjct: 727 RQELDEANSTIKQ-WE----------------ESWKQAKQACDAWKKEAEEAGERASAAG 769

Query: 134 AEGGVGTGGGCGSAQDAHRPDVLTGRAQQLHDQVDLVDLGSAGEKRPVRQQL 185
           AE        C  A++  + D L  + ++L ++++ +  G   +  P    L
Sbjct: 770 AE--------CELARE--QRDALEVQVKKLQEELERLHAGPEPQALPAFSDL 811


>gi|90903231 huntingtin [Homo sapiens]
          Length = 3144

 Score = 31.6 bits (70), Expect = 0.62
 Identities = 26/114 (22%), Positives = 43/114 (37%), Gaps = 21/114 (18%)

Query: 129 AGAAGAEGGVGTGGGCGSAQDAHRPDVLTGRAQQLHD-QVDLVDLGSA--------GEKR 179
           +G   A  GV T G  G        D++T + +  H  Q D VDL S         G++ 
Sbjct: 477 SGELAASSGVSTPGSAGH-------DIITEQPRSQHTLQADSVDLASCDLTSSATDGDEE 529

Query: 180 PVRQQLGQYAAHSPAE-----NSGPHCGQTSADPASARNRGPDCSQTFADPASV 228
            +        +  P++     N G       +D +     GPD + T +D + +
Sbjct: 530 DILSHSSSQVSAVPSDPAMDLNDGTQASSPISDSSQTTTEGPDSAVTPSDSSEI 583


>gi|31657109 zinc finger protein 282 [Homo sapiens]
          Length = 671

 Score = 31.6 bits (70), Expect = 0.62
 Identities = 12/17 (70%), Positives = 12/17 (70%)

Query: 130 GAAGAEGGVGTGGGCGS 146
           G  GAE G G GGGCGS
Sbjct: 482 GGGGAEAGTGAGGGCGS 498


>gi|239747516 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 209

 Score = 31.2 bits (69), Expect = 0.81
 Identities = 19/55 (34%), Positives = 21/55 (38%), Gaps = 5/55 (9%)

Query: 111 LGKALWEAGAEAQRAWARAGAAG-----AEGGVGTGGGCGSAQDAHRPDVLTGRA 160
           L  + WEAG  A       G A        GG+G GGGC    D      L G A
Sbjct: 143 LSSSRWEAGGGAGGGGGSRGPAAWDRIRVNGGLGGGGGCRGGGDGRGDSELRGAA 197


>gi|239741753 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 274

 Score = 31.2 bits (69), Expect = 0.81
 Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 3/62 (4%)

Query: 97  VGLLPEAVLADQWQLGKALWEAGAEAQRAWARAGAAGAEGGVGTGGGCGSAQDAHRPDVL 156
           VG+       ++  LG+A   AG E++R      A   +GG G  GG G  Q   R  +L
Sbjct: 14  VGVRKREEEEEKSSLGRA---AGVESRRRAGEGAAGRRDGGWGPPGGAGDHQTLQRASLL 70

Query: 157 TG 158
            G
Sbjct: 71  PG 72


>gi|239741394 PREDICTED: hypothetical protein XP_002342192 [Homo
           sapiens]
          Length = 209

 Score = 31.2 bits (69), Expect = 0.81
 Identities = 19/55 (34%), Positives = 21/55 (38%), Gaps = 5/55 (9%)

Query: 111 LGKALWEAGAEAQRAWARAGAAG-----AEGGVGTGGGCGSAQDAHRPDVLTGRA 160
           L  + WEAG  A       G A        GG+G GGGC    D      L G A
Sbjct: 143 LSSSRWEAGGGAGGGGGSRGPAAWDRIRVNGGLGGGGGCRGGGDGRGDSELRGAA 197


>gi|155722994 zinc finger CCCH-type containing 3 [Homo sapiens]
          Length = 948

 Score = 31.2 bits (69), Expect = 0.81
 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)

Query: 175 AGEKRPVRQQLGQYAAHSPAENSGPHCGQTSADPASARNRGPDCSQTFADPASVRH 230
           +  +RP RQ     A  + A  + PHC   SA P+S++      S + + PAS+ H
Sbjct: 834 SASQRPTRQTPSSAALTAAAVAAPPHCPGGSASPSSSK-ASSSSSSSSSPPASLDH 888


>gi|169171388 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 154

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 27/101 (26%), Positives = 41/101 (40%), Gaps = 10/101 (9%)

Query: 130 GAAGAEGGVGTGGGCGSAQDAHRPDVLTGRAQQLHDQVDLVDLGSAGEKRPVRQQ---LG 186
           GA GAEGG G  G      ++ RP    GR +  H Q +       G+    R      G
Sbjct: 57  GAGGAEGGAGGAGRARERAESGRP---CGRRR--HPQAEPAPKEFQGDGAAARADALTAG 111

Query: 187 QYAAHSPAENSGPHCGQTSADPASAR--NRGPDCSQTFADP 225
           + A  +P    G    +++++  S R   RGP    +  +P
Sbjct: 112 KSAEPAPGGEGGERGEESASERESERAPGRGPGARSSAGEP 152


>gi|239749096 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 154

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 27/101 (26%), Positives = 41/101 (40%), Gaps = 10/101 (9%)

Query: 130 GAAGAEGGVGTGGGCGSAQDAHRPDVLTGRAQQLHDQVDLVDLGSAGEKRPVRQQ---LG 186
           GA GAEGG G  G      ++ RP    GR +  H Q +       G+    R      G
Sbjct: 57  GAGGAEGGAGGAGRARERAESGRP---CGRRR--HPQAEPAPKEFQGDGAAARADALTAG 111

Query: 187 QYAAHSPAENSGPHCGQTSADPASAR--NRGPDCSQTFADP 225
           + A  +P    G    +++++  S R   RGP    +  +P
Sbjct: 112 KSAEPAPGGEGGERGEESASERESERAPGRGPGARSSAGEP 152


>gi|239743123 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 123

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 27/101 (26%), Positives = 41/101 (40%), Gaps = 10/101 (9%)

Query: 130 GAAGAEGGVGTGGGCGSAQDAHRPDVLTGRAQQLHDQVDLVDLGSAGEKRPVRQQ---LG 186
           GA GAEGG G  G      ++ RP    GR +  H Q +       G+    R      G
Sbjct: 26  GAGGAEGGAGGAGRARERAESGRP---CGRRR--HPQAEPAPKEFQGDGAAARADALTAG 80

Query: 187 QYAAHSPAENSGPHCGQTSADPASAR--NRGPDCSQTFADP 225
           + A  +P    G    +++++  S R   RGP    +  +P
Sbjct: 81  KSAEPAPGGEGGERGEESASERESERAPGRGPGARSSAGEP 121


>gi|14249452 zinc finger CCCH-type containing 10 [Homo sapiens]
          Length = 434

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 29/96 (30%), Positives = 40/96 (41%), Gaps = 14/96 (14%)

Query: 134 AEGGVGTGGGCGSAQDAHRPDVLTGRAQQLHDQVDLVDLGSAGEKRPVRQQLGQYAAHSP 193
           A GG GTGGG   +       VL GR   L+D  DL D G    +   +++ G       
Sbjct: 167 ARGGGGTGGGSTGS-------VLPGRRHDLYDIYDLPDRGFEDHEPGPKRRRG-----GC 214

Query: 194 AENSGPHCGQTSADPASARNRGPDCSQTFADPASVR 229
               GPH    S + + A  RG +C     + A +R
Sbjct: 215 CPPDGPHF--ESYEYSLAPPRGVECRLLEEENAMLR 248


>gi|16753221 cadherin 22 precursor [Homo sapiens]
          Length = 828

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 13/24 (54%), Positives = 15/24 (62%)

Query: 130 GAAGAEGGVGTGGGCGSAQDAHRP 153
           G+AG   G G+GGG GS   AH P
Sbjct: 704 GSAGGGAGGGSGGGAGSPPQAHLP 727


>gi|239757081 PREDICTED: hypothetical protein LOC100127987 [Homo
           sapiens]
          Length = 755

 Score = 30.4 bits (67), Expect = 1.4
 Identities = 16/47 (34%), Positives = 20/47 (42%)

Query: 104 VLADQWQLGKALWEAGAEAQRAWARAGAAGAEGGVGTGGGCGSAQDA 150
           V+   W  G   W A  E +        +G E GVG G G  +AQ A
Sbjct: 84  VITGAWAGGPGNWRAEGETEAPLTVGRDSGLEAGVGVGCGLRTAQPA 130


>gi|169213239 PREDICTED: hypothetical protein LOC100127987 [Homo
           sapiens]
          Length = 755

 Score = 30.4 bits (67), Expect = 1.4
 Identities = 16/47 (34%), Positives = 20/47 (42%)

Query: 104 VLADQWQLGKALWEAGAEAQRAWARAGAAGAEGGVGTGGGCGSAQDA 150
           V+   W  G   W A  E +        +G E GVG G G  +AQ A
Sbjct: 84  VITGAWAGGPGNWRAEGETEAPLTVGRDSGLEAGVGVGCGLRTAQPA 130


>gi|169212748 PREDICTED: hypothetical protein LOC100127987 [Homo
           sapiens]
          Length = 755

 Score = 30.4 bits (67), Expect = 1.4
 Identities = 16/47 (34%), Positives = 20/47 (42%)

Query: 104 VLADQWQLGKALWEAGAEAQRAWARAGAAGAEGGVGTGGGCGSAQDA 150
           V+   W  G   W A  E +        +G E GVG G G  +AQ A
Sbjct: 84  VITGAWAGGPGNWRAEGETEAPLTVGRDSGLEAGVGVGCGLRTAQPA 130


>gi|148746211 NK2 transcription factor related, locus 3 [Homo
           sapiens]
          Length = 364

 Score = 30.4 bits (67), Expect = 1.4
 Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 1/74 (1%)

Query: 118 AGAEAQRAWARA-GAAGAEGGVGTGGGCGSAQDAHRPDVLTGRAQQLHDQVDLVDLGSAG 176
           A A A  A++ + G A   GG G GGG  +A  A +P           +  +L   GS G
Sbjct: 279 AAAAAAAAYSSSYGCAYPAGGGGGGGGTSAATTAMQPACSAAGGGPFVNVSNLGGFGSGG 338

Query: 177 EKRPVRQQLGQYAA 190
             +P+ Q     AA
Sbjct: 339 SAQPLHQGTAAGAA 352


>gi|17402900 far upstream element-binding protein [Homo sapiens]
          Length = 644

 Score = 30.4 bits (67), Expect = 1.4
 Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 10/59 (16%)

Query: 131 AAGAEGGVGTGGGCGSAQDAHRPDVLTGRAQQLHDQV--------DLVDLGSAGEKRPV 181
           ++G+ GG G GGG G   DA + D L  RA+Q+  ++        +  D G  G+KRP+
Sbjct: 11  SSGSAGGGGGGGGGGGVNDAFK-DALQ-RARQIAAKIGGDAGTSLNSNDYGYGGQKRPL 67


>gi|37537558 nuclear apoptosis inducing factor 1 [Homo sapiens]
          Length = 327

 Score = 30.4 bits (67), Expect = 1.4
 Identities = 24/66 (36%), Positives = 29/66 (43%), Gaps = 7/66 (10%)

Query: 119 GAEAQRAWARAGAAGAEGGVGTGGGCGSAQDAHRPDVLTGRAQQ---LHDQVDLVDLGSA 175
           G EA       GA    GG GTGGG G    A  P +LT   Q+   L  +  ++ L S 
Sbjct: 92  GGEAPGPTEEDGA----GGPGTGGGSGGGGPAVAPVLLTPMQQRICNLLGEATIISLPST 147

Query: 176 GEKRPV 181
            E  PV
Sbjct: 148 TEIHPV 153


>gi|38570105 Ras-interacting protein 1 [Homo sapiens]
          Length = 963

 Score = 30.4 bits (67), Expect = 1.4
 Identities = 31/120 (25%), Positives = 50/120 (41%), Gaps = 9/120 (7%)

Query: 76  QEVQQAQPGLRQPWELVLQVVVGLLPEAVL--ADQWQLGKALWEAGAEAQRAWARAGAAG 133
           QE+ +A+PG  + +EL  +     L +     AD    G   W       RA A  GAA 
Sbjct: 239 QELWRARPGWARRFELRGREEARRLEQEAFGAADSEGTGAPSWRPQKNRSRA-ASGGAAL 297

Query: 134 AEGGVGTGGGCGSAQDAHRPDVLTGRAQQLHDQVDLVDLGSAGEKRPVRQQLGQYAAHSP 193
           A  G GTG G  +            R++ L  +  + +L   G +R  +++  Q  + +P
Sbjct: 298 ASPGPGTGSGAPAGSGGKE------RSENLSLRRSVSELSLQGRRRRQQERRQQALSMAP 351


>gi|239757861 PREDICTED: similar to armadillo repeat containing,
            X-linked 4 [Homo sapiens]
          Length = 2382

 Score = 30.0 bits (66), Expect = 1.8
 Identities = 15/34 (44%), Positives = 17/34 (50%)

Query: 117  EAGAEAQRAWARAGAAGAEGGVGTGGGCGSAQDA 150
            EAGA A+        AGAE G G G G G+   A
Sbjct: 1908 EAGAGAEAGAGAGAEAGAEAGAGAGAGPGTESGA 1941



 Score = 27.7 bits (60), Expect = 9.0
 Identities = 18/32 (56%), Positives = 20/32 (62%), Gaps = 2/32 (6%)

Query: 117  EAGAEAQR-AWARAGA-AGAEGGVGTGGGCGS 146
            EAGA A+  A A AGA AGAE G   G G G+
Sbjct: 1902 EAGAGAEAGAGAEAGAGAGAEAGAEAGAGAGA 1933


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.314    0.131    0.422 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,449,952
Number of Sequences: 37866
Number of extensions: 574380
Number of successful extensions: 2518
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 59
Number of HSP's that attempted gapping in prelim test: 2394
Number of HSP's gapped (non-prelim): 151
length of query: 236
length of database: 18,247,518
effective HSP length: 99
effective length of query: 137
effective length of database: 14,498,784
effective search space: 1986333408
effective search space used: 1986333408
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.