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Search of human proteins with 239756475
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239756475 PREDICTED: similar to hCG2045457 [Homo sapiens]
(337 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239756475 PREDICTED: similar to hCG2045457 [Homo sapiens] 685 0.0
gi|239750999 PREDICTED: similar to hCG2045457 [Homo sapiens] 471 e-133
gi|239745402 PREDICTED: similar to hCG2045457 [Homo sapiens] 471 e-133
gi|239755040 PREDICTED: hypothetical protein XP_002346201 [Homo ... 33 0.28
gi|239749529 PREDICTED: hypothetical protein XP_002347078 [Homo ... 33 0.28
gi|239743678 PREDICTED: hypothetical protein XP_002342943 [Homo ... 33 0.28
gi|39777586 DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 [Homo ... 33 0.36
gi|29336063 plexin B3 isoform 1 [Homo sapiens] 30 2.3
gi|239757861 PREDICTED: similar to armadillo repeat containing, ... 30 2.3
gi|253795481 plexin B3 isoform 2 [Homo sapiens] 30 3.1
gi|111955162 5-azacytidine induced 1 isoform b [Homo sapiens] 30 3.1
gi|111955084 5-azacytidine induced 1 isoform a [Homo sapiens] 30 3.1
gi|239753887 PREDICTED: hypothetical protein [Homo sapiens] 29 5.2
gi|169215981 PREDICTED: hypothetical protein [Homo sapiens] 29 6.8
gi|239755739 PREDICTED: hypothetical protein [Homo sapiens] 29 6.8
gi|169215786 PREDICTED: hypothetical protein [Homo sapiens] 29 6.8
gi|169215573 PREDICTED: hypothetical protein [Homo sapiens] 29 6.8
gi|206597556 kelch domain containing 7B [Homo sapiens] 29 6.8
gi|226371750 terminal uridylyl transferase 1, U6 snRNA-specific ... 28 8.9
gi|239755255 PREDICTED: hypothetical protein [Homo sapiens] 28 8.9
gi|239749748 PREDICTED: hypothetical protein XP_002347156 [Homo ... 28 8.9
gi|239744003 PREDICTED: hypothetical protein XP_002343004 [Homo ... 28 8.9
>gi|239756475 PREDICTED: similar to hCG2045457 [Homo sapiens]
Length = 337
Score = 685 bits (1767), Expect = 0.0
Identities = 337/337 (100%), Positives = 337/337 (100%)
Query: 1 MPLDGCVLKVLFHRVLAETRDPSSFTKNVQKMKRVRDADLAVAALSRLRGKVWVKAWVSA 60
MPLDGCVLKVLFHRVLAETRDPSSFTKNVQKMKRVRDADLAVAALSRLRGKVWVKAWVSA
Sbjct: 1 MPLDGCVLKVLFHRVLAETRDPSSFTKNVQKMKRVRDADLAVAALSRLRGKVWVKAWVSA 60
Query: 61 DRRAAPLTVLWLGSRSIPEKLEANASRKPARGNQKVLLVKSDIPRWFLWTWFLALEVEVQ 120
DRRAAPLTVLWLGSRSIPEKLEANASRKPARGNQKVLLVKSDIPRWFLWTWFLALEVEVQ
Sbjct: 61 DRRAAPLTVLWLGSRSIPEKLEANASRKPARGNQKVLLVKSDIPRWFLWTWFLALEVEVQ 120
Query: 121 TAHAWHSMQSLPRLRVGEHVWEDPRLWPPNALCWLVSRDPAPPAPTLGEQQFTDPARVLR 180
TAHAWHSMQSLPRLRVGEHVWEDPRLWPPNALCWLVSRDPAPPAPTLGEQQFTDPARVLR
Sbjct: 121 TAHAWHSMQSLPRLRVGEHVWEDPRLWPPNALCWLVSRDPAPPAPTLGEQQFTDPARVLR 180
Query: 181 RCHGVAHGSGVCEDLMVIATLERHEVQMKAPPRLSRAIADVTLESKTALGRPVINRQLLG 240
RCHGVAHGSGVCEDLMVIATLERHEVQMKAPPRLSRAIADVTLESKTALGRPVINRQLLG
Sbjct: 181 RCHGVAHGSGVCEDLMVIATLERHEVQMKAPPRLSRAIADVTLESKTALGRPVINRQLLG 240
Query: 241 ALLSKGREGLPGLEGEGTLASEGREGTGHVAIREDAEEGGWAGAGAGPQRASQIVVRTWD 300
ALLSKGREGLPGLEGEGTLASEGREGTGHVAIREDAEEGGWAGAGAGPQRASQIVVRTWD
Sbjct: 241 ALLSKGREGLPGLEGEGTLASEGREGTGHVAIREDAEEGGWAGAGAGPQRASQIVVRTWD 300
Query: 301 FTESRLKPASPGHDQITLQQDLSGERVRGEDAIEGSS 337
FTESRLKPASPGHDQITLQQDLSGERVRGEDAIEGSS
Sbjct: 301 FTESRLKPASPGHDQITLQQDLSGERVRGEDAIEGSS 337
>gi|239750999 PREDICTED: similar to hCG2045457 [Homo sapiens]
Length = 273
Score = 471 bits (1211), Expect = e-133
Identities = 241/282 (85%), Positives = 242/282 (85%), Gaps = 17/282 (6%)
Query: 1 MPLDGCVLKVLFHRVLAETRDPSSFTKNVQKMKRVRDADLAVAALSRLRGKVWVKAWVSA 60
MPLDGCVLKVLFHRVLAETRDPSSFTKNVQKMKRVRDADLAVAALSRLRGKVWVKAWVSA
Sbjct: 1 MPLDGCVLKVLFHRVLAETRDPSSFTKNVQKMKRVRDADLAVAALSRLRGKVWVKAWVSA 60
Query: 61 DRRAAPLTVLWLGSRSIPEKLEANASRKPARGNQKVLLVKSDIPRWFLWTWFLALEVEVQ 120
DRRAAPLTVLWLGSRSIPEKLEANASRKPARGNQKVLLVKSDIPRWFLWTWFLALEVEVQ
Sbjct: 61 DRRAAPLTVLWLGSRSIPEKLEANASRKPARGNQKVLLVKSDIPRWFLWTWFLALEVEVQ 120
Query: 121 TAHAWHSMQSLPRLRVGEHVWEDPRLWPPNALCWLVSRDPAPPAPTLGEQQFTDPARVLR 180
TAHAWHSMQSLPRLRVGEHVWEDPRLWPPNALCWLVSRDPAPPAPTLGEQQFTDPARVLR
Sbjct: 121 TAHAWHSMQSLPRLRVGEHVWEDPRLWPPNALCWLVSRDPAPPAPTLGEQQFTDPARVLR 180
Query: 181 RCHGVAHGSGVCEDLMVIATLERHEVQMKAPPRLSRAIADVTLESKTALGRPVINRQLLG 240
RCHGVAHGSGVCEDLMVIATLERHEVQMKAPPRLSRAIADVTLESKT G
Sbjct: 181 RCHGVAHGSGVCEDLMVIATLERHEVQMKAPPRLSRAIADVTLESKTPTGN--------- 231
Query: 241 ALLSKGREGLPGLEGEGTLASEGREGTGHVAIREDAEEGGWA 282
S G T G EG HV E+AE WA
Sbjct: 232 ---STGSASAASSPPAATYLPRGGEGPIHV---EEAER--WA 265
>gi|239745402 PREDICTED: similar to hCG2045457 [Homo sapiens]
Length = 273
Score = 471 bits (1211), Expect = e-133
Identities = 241/282 (85%), Positives = 242/282 (85%), Gaps = 17/282 (6%)
Query: 1 MPLDGCVLKVLFHRVLAETRDPSSFTKNVQKMKRVRDADLAVAALSRLRGKVWVKAWVSA 60
MPLDGCVLKVLFHRVLAETRDPSSFTKNVQKMKRVRDADLAVAALSRLRGKVWVKAWVSA
Sbjct: 1 MPLDGCVLKVLFHRVLAETRDPSSFTKNVQKMKRVRDADLAVAALSRLRGKVWVKAWVSA 60
Query: 61 DRRAAPLTVLWLGSRSIPEKLEANASRKPARGNQKVLLVKSDIPRWFLWTWFLALEVEVQ 120
DRRAAPLTVLWLGSRSIPEKLEANASRKPARGNQKVLLVKSDIPRWFLWTWFLALEVEVQ
Sbjct: 61 DRRAAPLTVLWLGSRSIPEKLEANASRKPARGNQKVLLVKSDIPRWFLWTWFLALEVEVQ 120
Query: 121 TAHAWHSMQSLPRLRVGEHVWEDPRLWPPNALCWLVSRDPAPPAPTLGEQQFTDPARVLR 180
TAHAWHSMQSLPRLRVGEHVWEDPRLWPPNALCWLVSRDPAPPAPTLGEQQFTDPARVLR
Sbjct: 121 TAHAWHSMQSLPRLRVGEHVWEDPRLWPPNALCWLVSRDPAPPAPTLGEQQFTDPARVLR 180
Query: 181 RCHGVAHGSGVCEDLMVIATLERHEVQMKAPPRLSRAIADVTLESKTALGRPVINRQLLG 240
RCHGVAHGSGVCEDLMVIATLERHEVQMKAPPRLSRAIADVTLESKT G
Sbjct: 181 RCHGVAHGSGVCEDLMVIATLERHEVQMKAPPRLSRAIADVTLESKTPTGN--------- 231
Query: 241 ALLSKGREGLPGLEGEGTLASEGREGTGHVAIREDAEEGGWA 282
S G T G EG HV E+AE WA
Sbjct: 232 ---STGSASAASSPPAATYLPRGGEGPIHV---EEAER--WA 265
>gi|239755040 PREDICTED: hypothetical protein XP_002346201 [Homo
sapiens]
Length = 225
Score = 33.5 bits (75), Expect = 0.28
Identities = 20/64 (31%), Positives = 25/64 (39%), Gaps = 8/64 (12%)
Query: 127 SMQSLPRLRVGEHVWEDPRLWPPNALCWLVSRDPAPPAPTLGEQQFTDPARVLRRCHGVA 186
S +PRL W W P CWL++ G ++ DP R RR G
Sbjct: 117 SCDFVPRLSCSSSSWAGECFWGPTPGCWLIAAG--------GFRRRCDPGRRGRRTGGPG 168
Query: 187 HGSG 190
GSG
Sbjct: 169 RGSG 172
>gi|239749529 PREDICTED: hypothetical protein XP_002347078 [Homo
sapiens]
Length = 225
Score = 33.5 bits (75), Expect = 0.28
Identities = 20/64 (31%), Positives = 25/64 (39%), Gaps = 8/64 (12%)
Query: 127 SMQSLPRLRVGEHVWEDPRLWPPNALCWLVSRDPAPPAPTLGEQQFTDPARVLRRCHGVA 186
S +PRL W W P CWL++ G ++ DP R RR G
Sbjct: 117 SCDFVPRLSCSSSSWAGECFWGPTPGCWLIAAG--------GFRRRCDPGRRGRRTGGPG 168
Query: 187 HGSG 190
GSG
Sbjct: 169 RGSG 172
>gi|239743678 PREDICTED: hypothetical protein XP_002342943 [Homo
sapiens]
Length = 225
Score = 33.5 bits (75), Expect = 0.28
Identities = 20/64 (31%), Positives = 25/64 (39%), Gaps = 8/64 (12%)
Query: 127 SMQSLPRLRVGEHVWEDPRLWPPNALCWLVSRDPAPPAPTLGEQQFTDPARVLRRCHGVA 186
S +PRL W W P CWL++ G ++ DP R RR G
Sbjct: 117 SCDFVPRLSCSSSSWAGECFWGPTPGCWLIAAG--------GFRRRCDPGRRGRRTGGPG 168
Query: 187 HGSG 190
GSG
Sbjct: 169 RGSG 172
>gi|39777586 DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 [Homo
sapiens]
Length = 1386
Score = 33.1 bits (74), Expect = 0.36
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 13/80 (16%)
Query: 247 REGLPGLEGEGTLASEGREGTGHVAIREDAEEGGWA--GAGAGPQRASQIVVRTWD---- 300
R+G PG G + GR G H + + GG G G G ++AS R WD
Sbjct: 7 RKGKPGKGGGKGSSRGGRGGRSHASKSHGSGGGGGGGGGGGGGNRKASS---RIWDDGDD 63
Query: 301 ---FTESRLKPASPGHDQIT 317
F+ESR +P+ P + I+
Sbjct: 64 FCIFSESR-RPSRPSNSNIS 82
>gi|29336063 plexin B3 isoform 1 [Homo sapiens]
Length = 1909
Score = 30.4 bits (67), Expect = 2.3
Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 7/67 (10%)
Query: 126 HSMQSLPRLRVGEHVWEDPRL--WPPNALCWLVSRDPAPPAPTLGEQQFTDPARVLRRCH 183
H+ Q P L H + P + WPP LC L+ PP P G +F+ P L
Sbjct: 3 HAAQETPLL----HHFMAPVMARWPPFGLCLLLLLLSPPPLPLTGAHRFSAPNTTLNHL- 57
Query: 184 GVAHGSG 190
+A G G
Sbjct: 58 ALAPGRG 64
>gi|239757861 PREDICTED: similar to armadillo repeat containing,
X-linked 4 [Homo sapiens]
Length = 2382
Score = 30.4 bits (67), Expect = 2.3
Identities = 27/83 (32%), Positives = 35/83 (42%), Gaps = 7/83 (8%)
Query: 255 GEGTLASEGREGTGHVAIREDAEEGGWAGAGAGPQRASQIVVRTWD----FTESRLKPA- 309
G G A G E AE G AGAGAGP S V +WD ESRL
Sbjct: 1904 GAGAEAGAGAEAGAGAGAEAGAEAG--AGAGAGPGTESGAGVWSWDGDATTVESRLGAGE 1961
Query: 310 SPGHDQITLQQDLSGERVRGEDA 332
G + TL +++ + + E +
Sbjct: 1962 EAGVESWTLARNVGEDELSRESS 1984
Score = 29.3 bits (64), Expect = 5.2
Identities = 30/103 (29%), Positives = 38/103 (36%), Gaps = 11/103 (10%)
Query: 237 QLLGALLSKGREG---LPGLEGEG-TLASEGREGTGHVAIREDAEEGGWAGAGAGPQRAS 292
Q +G L + G+ PG + G + E G A EG WAGAGAG +
Sbjct: 1322 QAIGELWAAGQASDGSWPGGQASGVSWVGEEAIGGSWTGAENQASEGSWAGAGAGNMSS- 1380
Query: 293 QIVVRTWDFTESRLKPASPGHDQITLQQDLSGERVRGEDAIEG 335
V W + A G T Q G + R ED G
Sbjct: 1381 ---VSYW---AGVVDQAGGGSWAGTSDQSGGGSKPRFEDQASG 1417
>gi|253795481 plexin B3 isoform 2 [Homo sapiens]
Length = 1932
Score = 30.0 bits (66), Expect = 3.1
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 147 WPPNALCWLVSRDPAPPAPTLGEQQFTDPARVLRRCHGVAHGSG 190
WPP LC L+ PP P G +F+ P L +A G G
Sbjct: 45 WPPFGLCLLLLLLSPPPLPLTGAHRFSAPNTTLNHL-ALAPGRG 87
>gi|111955162 5-azacytidine induced 1 isoform b [Homo sapiens]
Length = 1044
Score = 30.0 bits (66), Expect = 3.1
Identities = 32/127 (25%), Positives = 48/127 (37%), Gaps = 10/127 (7%)
Query: 213 RLSRAIADVTLESKTALGRPVINRQLLGALLSKGREGLPGLEGEGTLASEGREGTGHVAI 272
R +R A L+ K AL + G + +PG+ S GT H A+
Sbjct: 333 RQARRAAIQELQQKRALRAQKASTAERGPPENPRETRVPGMRQPAQELSPTPGGTAHQAL 392
Query: 273 REDAEEGGWAGAGAGPQRASQIVVRTWDFTESRLKPASPGHD--QITLQQDLSGERVRGE 330
+ + GG AG G R ++S +P P D Q L QD +G+ +
Sbjct: 393 KANNTGGGLPAAGPGD--------RCLPTSDSSPEPQQPPEDRTQDVLAQDAAGDNLEMM 444
Query: 331 DAIEGSS 337
GS+
Sbjct: 445 APSRGSA 451
>gi|111955084 5-azacytidine induced 1 isoform a [Homo sapiens]
Length = 1080
Score = 30.0 bits (66), Expect = 3.1
Identities = 32/127 (25%), Positives = 48/127 (37%), Gaps = 10/127 (7%)
Query: 213 RLSRAIADVTLESKTALGRPVINRQLLGALLSKGREGLPGLEGEGTLASEGREGTGHVAI 272
R +R A L+ K AL + G + +PG+ S GT H A+
Sbjct: 333 RQARRAAIQELQQKRALRAQKASTAERGPPENPRETRVPGMRQPAQELSPTPGGTAHQAL 392
Query: 273 REDAEEGGWAGAGAGPQRASQIVVRTWDFTESRLKPASPGHD--QITLQQDLSGERVRGE 330
+ + GG AG G R ++S +P P D Q L QD +G+ +
Sbjct: 393 KANNTGGGLPAAGPGD--------RCLPTSDSSPEPQQPPEDRTQDVLAQDAAGDNLEMM 444
Query: 331 DAIEGSS 337
GS+
Sbjct: 445 APSRGSA 451
>gi|239753887 PREDICTED: hypothetical protein [Homo sapiens]
Length = 127
Score = 29.3 bits (64), Expect = 5.2
Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 7/74 (9%)
Query: 259 LASEGREGTGHVAIREDAEEGGWAGAGAGPQRASQIVVRTWDFTESRLKPASPGHDQITL 318
+ SEGR G +R + G A GP RA+ +W ES+ G + L
Sbjct: 50 MPSEGRSWPGEATVRPELGLGSLASGSCGPTRAA----GSWAGAESK---DVVGRPESGL 102
Query: 319 QQDLSGERVRGEDA 332
+ G GEDA
Sbjct: 103 ETQPGGRAGPGEDA 116
>gi|169215981 PREDICTED: hypothetical protein [Homo sapiens]
Length = 299
Score = 28.9 bits (63), Expect = 6.8
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 229 LGRPVINRQLLGALLSKGREGLPGLEGEGTLASEGREGTGHVAIREDAEEGGWAGAGA 286
+G P N L +L+ G +P + GT S +G G + I E E+G W G G+
Sbjct: 97 VGAPAANTSL-PTMLATGIPSIPS-QALGTQCSPAGKGEGPIVIPE--EQGAWRGEGS 150
>gi|239755739 PREDICTED: hypothetical protein [Homo sapiens]
Length = 202
Score = 28.9 bits (63), Expect = 6.8
Identities = 15/40 (37%), Positives = 19/40 (47%)
Query: 230 GRPVINRQLLGALLSKGREGLPGLEGEGTLASEGREGTGH 269
GR R+ AL G+ PGL G G A+ G+ G H
Sbjct: 153 GRRPSRREEAAALAGGGKRTAPGLRGRGGRAAAGQGGDRH 192
>gi|169215786 PREDICTED: hypothetical protein [Homo sapiens]
Length = 299
Score = 28.9 bits (63), Expect = 6.8
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 229 LGRPVINRQLLGALLSKGREGLPGLEGEGTLASEGREGTGHVAIREDAEEGGWAGAGA 286
+G P N L +L+ G +P + GT S +G G + I E E+G W G G+
Sbjct: 97 VGAPAANTSL-PTMLATGIPSIPS-QALGTQCSPAGKGEGPIVIPE--EQGAWRGEGS 150
>gi|169215573 PREDICTED: hypothetical protein [Homo sapiens]
Length = 299
Score = 28.9 bits (63), Expect = 6.8
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 229 LGRPVINRQLLGALLSKGREGLPGLEGEGTLASEGREGTGHVAIREDAEEGGWAGAGA 286
+G P N L +L+ G +P + GT S +G G + I E E+G W G G+
Sbjct: 97 VGAPAANTSL-PTMLATGIPSIPS-QALGTQCSPAGKGEGPIVIPE--EQGAWRGEGS 150
>gi|206597556 kelch domain containing 7B [Homo sapiens]
Length = 594
Score = 28.9 bits (63), Expect = 6.8
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 213 RLSRAIADVTLESKTALGRPVINRQLLGALLSKGREGLP-GLEGE 256
RLS A + L +T GR V+ +L +L GR GLP G GE
Sbjct: 262 RLSAADRERILSLRTGRGRAVLGVLVLPSLYQGGRSGLPRGPRGE 306
>gi|226371750 terminal uridylyl transferase 1, U6 snRNA-specific
[Homo sapiens]
Length = 912
Score = 28.5 bits (62), Expect = 8.9
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 243 LSKGREGLPGLEGEGTLASEGREG-TGHVAIREDAEEGGWAGAGAG-PQRAS 292
L+ G+ G PG EG+ + A+ G GH A +E ++ G AG GA P AS
Sbjct: 754 LTTGKHGAPGEEGQPSHAALAERGPKGHEAAQEWSQ--GEAGKGASLPSSAS 803
>gi|239755255 PREDICTED: hypothetical protein [Homo sapiens]
Length = 297
Score = 28.5 bits (62), Expect = 8.9
Identities = 40/146 (27%), Positives = 57/146 (39%), Gaps = 29/146 (19%)
Query: 158 RDPAPPAPTLGEQQFTDPARVLRRCHGVAHGSGVCEDLMVIATLERHEVQMKAPPRLSRA 217
R P PPAP+ G A +L H V + + +++ E H
Sbjct: 54 RSPLPPAPSRGPATCMGAALLLPEAHDV-----LGQQDLILLLQEAH------------- 95
Query: 218 IADVTLESKTALGRPVINRQLLGA-LLSKGREGLPGLEGEGTL-------ASEGREGTGH 269
+ DV E+ L + + L+GA +L G +G+ E L A+ G G
Sbjct: 96 LVDVVGEAVIQLLQLHL---LVGAGVLELGVDGVGQREVHRVLQEPHPGHAAPQAHGRGA 152
Query: 270 VAIREDAEEGGWAGAGAGPQRASQIV 295
I G A AGAG QRA+Q V
Sbjct: 153 RGIHAARGRGVEAAAGAGAQRAAQAV 178
>gi|239749748 PREDICTED: hypothetical protein XP_002347156 [Homo
sapiens]
Length = 446
Score = 28.5 bits (62), Expect = 8.9
Identities = 40/146 (27%), Positives = 57/146 (39%), Gaps = 29/146 (19%)
Query: 158 RDPAPPAPTLGEQQFTDPARVLRRCHGVAHGSGVCEDLMVIATLERHEVQMKAPPRLSRA 217
R P PPAP+ G A +L H V + + +++ E H
Sbjct: 203 RSPLPPAPSRGPATCMGAALLLPEAHDV-----LGQQDLILLLQEAH------------- 244
Query: 218 IADVTLESKTALGRPVINRQLLGA-LLSKGREGLPGLEGEGTL-------ASEGREGTGH 269
+ DV E+ L + + L+GA +L G +G+ E L A+ G G
Sbjct: 245 LVDVVGEAVIQLLQLHL---LVGAGVLELGVDGVGQREVHRVLQEPHPGHAAPQAHGRGA 301
Query: 270 VAIREDAEEGGWAGAGAGPQRASQIV 295
I G A AGAG QRA+Q V
Sbjct: 302 RGIHAARGRGVEAAAGAGAQRAAQAV 327
>gi|239744003 PREDICTED: hypothetical protein XP_002343004 [Homo
sapiens]
Length = 446
Score = 28.5 bits (62), Expect = 8.9
Identities = 40/146 (27%), Positives = 57/146 (39%), Gaps = 29/146 (19%)
Query: 158 RDPAPPAPTLGEQQFTDPARVLRRCHGVAHGSGVCEDLMVIATLERHEVQMKAPPRLSRA 217
R P PPAP+ G A +L H V + + +++ E H
Sbjct: 203 RSPLPPAPSRGPATCMGAALLLPEAHDV-----LGQQDLILLLQEAH------------- 244
Query: 218 IADVTLESKTALGRPVINRQLLGA-LLSKGREGLPGLEGEGTL-------ASEGREGTGH 269
+ DV E+ L + + L+GA +L G +G+ E L A+ G G
Sbjct: 245 LVDVVGEAVIQLLQLHL---LVGAGVLELGVDGVGQREVHRVLQEPHPGHAAPQAHGRGA 301
Query: 270 VAIREDAEEGGWAGAGAGPQRASQIV 295
I G A AGAG QRA+Q V
Sbjct: 302 RGIHAARGRGVEAAAGAGAQRAAQAV 327
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.134 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,028,806
Number of Sequences: 37866
Number of extensions: 672690
Number of successful extensions: 2245
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 2222
Number of HSP's gapped (non-prelim): 34
length of query: 337
length of database: 18,247,518
effective HSP length: 103
effective length of query: 234
effective length of database: 14,347,320
effective search space: 3357272880
effective search space used: 3357272880
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.