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Search of human proteins with 239756380
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239756380 PREDICTED: hypothetical protein [Homo sapiens]
(151 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239756380 PREDICTED: hypothetical protein [Homo sapiens] 314 2e-86
gi|239750901 PREDICTED: hypothetical protein XP_002347602 [Homo ... 314 2e-86
gi|239745293 PREDICTED: hypothetical protein XP_002343426 [Homo ... 314 2e-86
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 44 4e-05
gi|38150007 small nuclear ribonucleoprotein polypeptide B/B' iso... 44 5e-05
gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens] 44 5e-05
gi|51479177 iroquois homeobox protein 1 [Homo sapiens] 44 7e-05
gi|33286446 opioid growth factor receptor [Homo sapiens] 41 3e-04
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 41 4e-04
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 40 6e-04
gi|239755509 PREDICTED: hypothetical protein [Homo sapiens] 40 8e-04
gi|239750019 PREDICTED: hypothetical protein [Homo sapiens] 40 8e-04
gi|239744332 PREDICTED: hypothetical protein XP_002343119 [Homo ... 40 8e-04
gi|160707881 formin 2 [Homo sapiens] 40 8e-04
gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens] 40 8e-04
gi|239750586 PREDICTED: hypothetical protein XP_002347439 [Homo ... 40 0.001
gi|239744883 PREDICTED: hypothetical protein XP_002344274 [Homo ... 40 0.001
gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sap... 39 0.001
gi|239747143 PREDICTED: hypothetical protein XP_002343924 [Homo ... 39 0.001
gi|116256356 alpha 4 type IV collagen precursor [Homo sapiens] 39 0.001
gi|27436927 synoviolin 1 isoform b [Homo sapiens] 39 0.002
gi|241982780 programmed cell death 6 interacting protein isoform... 39 0.002
gi|22027538 programmed cell death 6 interacting protein isoform ... 39 0.002
gi|239741995 PREDICTED: hypothetical protein XP_002342368 [Homo ... 39 0.002
gi|4507125 small nuclear ribonucleoprotein polypeptide B/B' isof... 39 0.002
gi|149999378 inverted formin 2 isoform 2 [Homo sapiens] 39 0.002
gi|149999380 inverted formin 2 isoform 1 [Homo sapiens] 39 0.002
gi|148727255 microtubule associated serine/threonine kinase fami... 39 0.002
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 39 0.002
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 39 0.002
>gi|239756380 PREDICTED: hypothetical protein [Homo sapiens]
Length = 151
Score = 314 bits (805), Expect = 2e-86
Identities = 151/151 (100%), Positives = 151/151 (100%)
Query: 1 MKLTGGPEVASRVHSDLAGSAAGLREIPAERGDAGSEQGEEQEAAEHPSAPRPPGHGCAR 60
MKLTGGPEVASRVHSDLAGSAAGLREIPAERGDAGSEQGEEQEAAEHPSAPRPPGHGCAR
Sbjct: 1 MKLTGGPEVASRVHSDLAGSAAGLREIPAERGDAGSEQGEEQEAAEHPSAPRPPGHGCAR 60
Query: 61 AAASFGRASRPLGSGAAFDPFKSAPLGAEPALSSGAVPRARRPPRRPHPPARLPGRGTPF 120
AAASFGRASRPLGSGAAFDPFKSAPLGAEPALSSGAVPRARRPPRRPHPPARLPGRGTPF
Sbjct: 61 AAASFGRASRPLGSGAAFDPFKSAPLGAEPALSSGAVPRARRPPRRPHPPARLPGRGTPF 120
Query: 121 GPPRDLHTHTLARTRAPLPPGASGGSPPPSG 151
GPPRDLHTHTLARTRAPLPPGASGGSPPPSG
Sbjct: 121 GPPRDLHTHTLARTRAPLPPGASGGSPPPSG 151
>gi|239750901 PREDICTED: hypothetical protein XP_002347602 [Homo
sapiens]
Length = 151
Score = 314 bits (805), Expect = 2e-86
Identities = 151/151 (100%), Positives = 151/151 (100%)
Query: 1 MKLTGGPEVASRVHSDLAGSAAGLREIPAERGDAGSEQGEEQEAAEHPSAPRPPGHGCAR 60
MKLTGGPEVASRVHSDLAGSAAGLREIPAERGDAGSEQGEEQEAAEHPSAPRPPGHGCAR
Sbjct: 1 MKLTGGPEVASRVHSDLAGSAAGLREIPAERGDAGSEQGEEQEAAEHPSAPRPPGHGCAR 60
Query: 61 AAASFGRASRPLGSGAAFDPFKSAPLGAEPALSSGAVPRARRPPRRPHPPARLPGRGTPF 120
AAASFGRASRPLGSGAAFDPFKSAPLGAEPALSSGAVPRARRPPRRPHPPARLPGRGTPF
Sbjct: 61 AAASFGRASRPLGSGAAFDPFKSAPLGAEPALSSGAVPRARRPPRRPHPPARLPGRGTPF 120
Query: 121 GPPRDLHTHTLARTRAPLPPGASGGSPPPSG 151
GPPRDLHTHTLARTRAPLPPGASGGSPPPSG
Sbjct: 121 GPPRDLHTHTLARTRAPLPPGASGGSPPPSG 151
>gi|239745293 PREDICTED: hypothetical protein XP_002343426 [Homo
sapiens]
Length = 151
Score = 314 bits (805), Expect = 2e-86
Identities = 151/151 (100%), Positives = 151/151 (100%)
Query: 1 MKLTGGPEVASRVHSDLAGSAAGLREIPAERGDAGSEQGEEQEAAEHPSAPRPPGHGCAR 60
MKLTGGPEVASRVHSDLAGSAAGLREIPAERGDAGSEQGEEQEAAEHPSAPRPPGHGCAR
Sbjct: 1 MKLTGGPEVASRVHSDLAGSAAGLREIPAERGDAGSEQGEEQEAAEHPSAPRPPGHGCAR 60
Query: 61 AAASFGRASRPLGSGAAFDPFKSAPLGAEPALSSGAVPRARRPPRRPHPPARLPGRGTPF 120
AAASFGRASRPLGSGAAFDPFKSAPLGAEPALSSGAVPRARRPPRRPHPPARLPGRGTPF
Sbjct: 61 AAASFGRASRPLGSGAAFDPFKSAPLGAEPALSSGAVPRARRPPRRPHPPARLPGRGTPF 120
Query: 121 GPPRDLHTHTLARTRAPLPPGASGGSPPPSG 151
GPPRDLHTHTLARTRAPLPPGASGGSPPPSG
Sbjct: 121 GPPRDLHTHTLARTRAPLPPGASGGSPPPSG 151
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 44.3 bits (103), Expect = 4e-05
Identities = 36/106 (33%), Positives = 43/106 (40%), Gaps = 9/106 (8%)
Query: 44 AAEHPSAPRPPGHGCARAAASFGRASRPLGSGAAFDPFKSAPLGAEPA-LSSGAVPRARR 102
AA P P PP AAA+ RA R + A P +P A+P + A P A
Sbjct: 124 AAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPP---SPGPAQPGPRAQRAAPLAAP 180
Query: 103 PPRRPHPPARLPGRGTPFGPPRDLHTHTLARTRAPLPPGASGGSPP 148
PP PPA P G PP +A PLPP +PP
Sbjct: 181 PPAPAAPPAVAPPAGPRRAPPP-----AVAAREPPLPPPPQPPAPP 221
Score = 30.8 bits (68), Expect = 0.46
Identities = 34/108 (31%), Positives = 42/108 (38%), Gaps = 16/108 (14%)
Query: 60 RAAASFGRASR--PLGSGAAFDPFKSAPLGAEPALSSGAVPRARRPPRRPHP-----PAR 112
+ + S+ A+R P GA AP GA A ++ A P PP P P PAR
Sbjct: 88 KGSISYRNAARVQPPRRGATPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPAR 147
Query: 113 LP----GRGTPFGPPRDLHTHTLARTRAPL--PPGASGGSP---PPSG 151
P T P A+ APL PP A P PP+G
Sbjct: 148 APRAAAAAATAPPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAG 195
Score = 26.9 bits (58), Expect = 6.6
Identities = 30/108 (27%), Positives = 39/108 (36%), Gaps = 26/108 (24%)
Query: 42 QEAAEHPSAPRPPGHGCARAAASFGRASRPL-------------GSGAAFDPFKSAPLGA 88
Q+ P P+PP G A A G A+RP+ G+G + L
Sbjct: 222 QQQQPPPPQPQPPPEGGAVRA---GGAARPVSLREVVRYLGGSGGAGGRLTRGRVQGLLE 278
Query: 89 EPALSSG----------AVPRARRPPRRPHPPARLPGRGTPFGPPRDL 126
E A + G A+PR RP R P + P R G R L
Sbjct: 279 EEAAARGRLERTRLGALALPRGDRPGRAPPAASARPSRSKRGGEERVL 326
>gi|38150007 small nuclear ribonucleoprotein polypeptide B/B'
isoform B' [Homo sapiens]
Length = 240
Score = 43.9 bits (102), Expect = 5e-05
Identities = 50/153 (32%), Positives = 60/153 (39%), Gaps = 26/153 (16%)
Query: 5 GGPEVASRVHSDLAGSAAGLREIPAERGDAGSEQGEEQEAAEHPSAPRPPGHGCARAAAS 64
GGP + G AG+ A G AG +G + + P G G AAA+
Sbjct: 102 GGPGIGRAAGR---GIPAGVPMPQAPAGLAGPVRGVGGPSQQ---VMTPQGRGTVAAAAA 155
Query: 65 FGRASRPLGSGAAFDPFKSAP-----LGAEPALSSGAVPRARRPPRRPHPPARLPGRGTP 119
AS G+ + P + P GA P G P RPP P P PGRGTP
Sbjct: 156 AATASIA-GAPTQYPPGRGGPPPPMGRGAPPPGMMGPPP-GMRPPMGP-PMGIPPGRGTP 212
Query: 120 FG-PPRDLHTHTLARTRAPLPPGASGGSPPPSG 151
G PP + P PPG G PPP G
Sbjct: 213 MGMPPPGMR---------PPPPGMRG--PPPPG 234
>gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens]
Length = 424
Score = 43.9 bits (102), Expect = 5e-05
Identities = 31/85 (36%), Positives = 36/85 (42%), Gaps = 8/85 (9%)
Query: 67 RASRPLGSGAAFDPFKSAPLGAEPALSSGAVPRARRPPRRPHPPARLPGRGTPFGPPRDL 126
+A RP A P SAP +L SG P PP PP PG P PP
Sbjct: 203 QADRPHQLFADAPPPPSAPNPVVSSLGSGLPPPGMPPPGSFPPPVPPPGALPPGIPP--- 259
Query: 127 HTHTLARTRAPLPPGASGGSPPPSG 151
A P+PPGA+G PP +G
Sbjct: 260 -----AMPPPPMPPGAAGHGPPSAG 279
Score = 37.4 bits (85), Expect = 0.005
Identities = 22/63 (34%), Positives = 26/63 (41%), Gaps = 7/63 (11%)
Query: 94 SGAVPRARRPPRRPHP-------PARLPGRGTPFGPPRDLHTHTLARTRAPLPPGASGGS 146
SG P R PP PHP P R P G+P G P + H + +PP G
Sbjct: 329 SGGQPPPRPPPGMPHPGPPPMGMPPRGPPFGSPMGHPGPMPPHGMRGPPPLMPPHGYTGP 388
Query: 147 PPP 149
P P
Sbjct: 389 PRP 391
Score = 28.9 bits (63), Expect = 1.7
Identities = 39/132 (29%), Positives = 44/132 (33%), Gaps = 34/132 (25%)
Query: 43 EAAEHPSAPRPPGHGCARAAASFGRASRPLGSGAA------FDPFKSAPLGAEPALSSGA 96
+A PSAP P +S G P G P + P G PA+
Sbjct: 213 DAPPPPSAPNP-------VVSSLGSGLPPPGMPPPGSFPPPVPPPGALPPGIPPAMPPPP 265
Query: 97 VP---RARRPPRRPHPPARLPGRGT----PFGPPRDLHT------------HTLARTRAP 137
+P PP P A PG G PF P H H L A
Sbjct: 266 MPPGAAGHGPPSAGTPGAGHPGHGHSHPHPFPPGGMPHPGMSQMQLAHHGPHGLGHPHAG 325
Query: 138 LPPGASGGSPPP 149
PPG SGG PPP
Sbjct: 326 -PPG-SGGQPPP 335
>gi|51479177 iroquois homeobox protein 1 [Homo sapiens]
Length = 480
Score = 43.5 bits (101), Expect = 7e-05
Identities = 45/154 (29%), Positives = 60/154 (38%), Gaps = 29/154 (18%)
Query: 5 GGPEVASRVHSDLAGSAAGLREIPAERGDAGSEQGEEQEAAEH----PSA---------- 50
G PE A ++ + + +I GD +E E++ A H PSA
Sbjct: 212 GDPEKAED-DEEIDLESIDIDKIDEHDGDQSNEDDEDKAEAPHAPAAPSALARDQGSPLA 270
Query: 51 ------PRPPGHGCARAAASFGRASRPLGSGAAFDPFKSAPLG-------AEPALSSGAV 97
P+ G A+ A G ++R L GAA + AP G AE A S
Sbjct: 271 AADVLKPQDSPLGLAKEAPEPG-STRLLSPGAAAGGLQGAPHGKPKIWSLAETATSPDGA 329
Query: 98 PRARRPPRRPHPPARLPGRGTPFGPPRDLHTHTL 131
P+A PP HP A P G P P L +H L
Sbjct: 330 PKASPPPPAGHPGAHGPSAGAPLQHPAFLPSHGL 363
>gi|33286446 opioid growth factor receptor [Homo sapiens]
Length = 677
Score = 41.2 bits (95), Expect = 3e-04
Identities = 47/165 (28%), Positives = 59/165 (35%), Gaps = 21/165 (12%)
Query: 1 MKLTGGPEVASRVHSDLAGSAAGLREIPAERGDAGSEQGEEQEAAEHPSAPRPPGHGCAR 60
+ L G P A H S G+ E G G ++G +E P P P G
Sbjct: 479 LALAGSP--APSGHPKAGHSENGVEE--DTEGRTGPKEGTPGSPSETPG-PSPAGPAGDE 533
Query: 61 AAASFGRASRPLGSGAAFD-----------PFKSAPLGAEPALSSGAVPR-ARRPPRRPH 108
A S P +G A D P + P G EPA S P + P R
Sbjct: 534 PAESPSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGPSPAGPTRDE 593
Query: 109 P---PARLPGRGTPFGPPRDLHTHTLARTRAPLPPGASGGSPPPS 150
P P+ PG P GP D + + T P P G +G P S
Sbjct: 594 PAESPSETPGP-RPAGPAGDEPAESPSETPGPRPAGPAGDEPAES 637
Score = 38.1 bits (87), Expect = 0.003
Identities = 39/138 (28%), Positives = 47/138 (34%), Gaps = 17/138 (12%)
Query: 28 PAERGDAGSEQGEEQEAAEHPSAPRPPGHGCARAAASFGRASRPLGSGAAFD-------- 79
P+ G AG E E +E P PRP G A S P +G A D
Sbjct: 524 PSPAGPAGDEPAESP--SETPG-PRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSE 580
Query: 80 ---PFKSAPLGAEPALSSGAVPRARRPPRRPHPPARLPGRGT---PFGPPRDLHTHTLAR 133
P + P EPA S P R PA P P GP D + +
Sbjct: 581 TPGPSPAGPTRDEPAESPSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSE 640
Query: 134 TRAPLPPGASGGSPPPSG 151
T P P G + P +G
Sbjct: 641 TPGPSPAGPTRDEPAKAG 658
Score = 26.6 bits (57), Expect = 8.6
Identities = 34/122 (27%), Positives = 41/122 (33%), Gaps = 30/122 (24%)
Query: 4 TGGPEVASRVHSDLAGSAAGLREIPAERGDAGSEQGEEQEAAEHPSAPRPPGHGCARAAA 63
T GP A + A S + E P AG + E E+ PRP G A
Sbjct: 561 TPGPRPAGPAGDEPAESPS---ETPGP-SPAGPTRDEPAESPSETPGPRPAGPAGDEPAE 616
Query: 64 SFGRASRPLGSGAAFDPFKSAPLGAEPALSSGAVPRARRPPRRPHPPARLPGRGTPFGPP 123
S P +G P G EPA S P+ PG +P GP
Sbjct: 617 SPSETPGPRPAG---------PAGDEPAES----------------PSETPG-PSPAGPT 650
Query: 124 RD 125
RD
Sbjct: 651 RD 652
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 40.8 bits (94), Expect = 4e-04
Identities = 33/117 (28%), Positives = 40/117 (34%), Gaps = 24/117 (20%)
Query: 35 GSEQGEEQEAAEHPSAPRPPGHGCARAAASFGRASRPLGSGAAFDPFKSAPLGAEPALSS 94
G QG + P P PPG +P G D KS + P
Sbjct: 199 GKPQGPPPQGGNKPQGPPPPG--------------KPQGPPPQGDN-KSQSARSPPGKPQ 243
Query: 95 GAVPRARRPPRRPHPPARLPGRGTPFGPPRDLHTHTLARTRAPLPPGASGGSPPPSG 151
G P+ P+ P PP G P GPP + + P PPG G PP G
Sbjct: 244 GPPPQGGNQPQGPPPPP-----GKPQGPPPQGGN----KPQGPPPPGKPQGPPPQGG 291
Score = 40.0 bits (92), Expect = 8e-04
Identities = 32/117 (27%), Positives = 40/117 (34%), Gaps = 24/117 (20%)
Query: 35 GSEQGEEQEAAEHPSAPRPPGHGCARAAASFGRASRPLGSGAAFDPFKSAPLGAEPALSS 94
G QG + P P PPG + P G + KS + P
Sbjct: 261 GKPQGPPPQGGNKPQGPPPPG-----------KPQGPPPQGGS----KSRSSRSPPGKPQ 305
Query: 95 GAVPRARRPPRRPHPPARLPGRGTPFGPPRDLHTHTLARTRAPLPPGASGGSPPPSG 151
G P+ P+ P PP G P GPP + + P PPG G PP G
Sbjct: 306 GPPPQGGNQPQGPPPPP-----GKPQGPPPQGGN----KPQGPPPPGKPQGPPPQGG 353
Score = 39.3 bits (90), Expect = 0.001
Identities = 34/117 (29%), Positives = 41/117 (35%), Gaps = 26/117 (22%)
Query: 35 GSEQGEEQEAAEHPSAPRPPGHGCARAAASFGRASRPLGSGAAFDPFKSAPLGAEPALSS 94
G QG + P P PPG +P G D KS + P
Sbjct: 76 GKPQGPPPQGGNKPQGPPPPG--------------KPQGPPPQGD--KSRSPRSPPGKPQ 119
Query: 95 GAVPRARRPPRRPHPPARLPGRGTPFGPPRDLHTHTLARTRAPLPPGASGGSPPPSG 151
G P+ P+ P PP G P GPP + + P PPG G PPP G
Sbjct: 120 GPPPQGGNQPQGPPPPP-----GKPQGPPPQGGN----KPQGPPPPGKPQG-PPPQG 166
Score = 39.3 bits (90), Expect = 0.001
Identities = 34/117 (29%), Positives = 41/117 (35%), Gaps = 25/117 (21%)
Query: 35 GSEQGEEQEAAEHPSAPRPPGHGCARAAASFGRASRPLGSGAAFDPFKSAPLGAEPALSS 94
G QG + P P PPG +P G D KS + P
Sbjct: 137 GKPQGPPPQGGNKPQGPPPPG--------------KPQGPPPQGDN-KSRSSRSPPGKPQ 181
Query: 95 GAVPRARRPPRRPHPPARLPGRGTPFGPPRDLHTHTLARTRAPLPPGASGGSPPPSG 151
G P+ P+ P PP G P GPP + + P PPG G PPP G
Sbjct: 182 GPPPQGGNQPQGPPPPP-----GKPQGPPPQGGN----KPQGPPPPGKPQG-PPPQG 228
Score = 32.0 bits (71), Expect = 0.20
Identities = 25/94 (26%), Positives = 31/94 (32%), Gaps = 4/94 (4%)
Query: 35 GSEQGEEQEAAEHPSAPRPPG--HGCARAAASFGRASRPLGSGAAFDPFKSA--PLGAEP 90
G QG + P P PPG G S R++R P + P G P
Sbjct: 323 GKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSARSPPGKPQGPPQQEGNNPQGPPP 382
Query: 91 ALSSGAVPRARRPPRRPHPPARLPGRGTPFGPPR 124
P +P P R P G P PP+
Sbjct: 383 PAGGNPQQPQAPPAGQPQGPPRPPQGGRPSRPPQ 416
Score = 31.2 bits (69), Expect = 0.35
Identities = 21/62 (33%), Positives = 25/62 (40%), Gaps = 10/62 (16%)
Query: 90 PALSSGAVPRARRPPRRPHPPARLPGRGTPFGPPRDLHTHTLARTRAPLPPGASGGSPPP 149
P G P+ P+ P PP G P GPP + + P PPG G PPP
Sbjct: 54 PGKPQGPPPQGGNQPQGPPPPP-----GKPQGPPPQGGN----KPQGPPPPGKPQG-PPP 103
Query: 150 SG 151
G
Sbjct: 104 QG 105
Score = 27.3 bits (59), Expect = 5.0
Identities = 18/57 (31%), Positives = 22/57 (38%), Gaps = 9/57 (15%)
Query: 95 GAVPRARRPPRRPHPPARLPGRGTPFGPPRDLHTHTLARTRAPLPPGASGGSPPPSG 151
GA P+ P+ P P G P GPP + + P PP PPP G
Sbjct: 38 GAPPQGGNKPQGPPSPP-----GKPQGPPPQGGN----QPQGPPPPPGKPQGPPPQG 85
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 40.4 bits (93), Expect = 6e-04
Identities = 35/117 (29%), Positives = 41/117 (35%), Gaps = 26/117 (22%)
Query: 35 GSEQGEEQEAAEHPSAPRPPGHGCARAAASFGRASRPLGSGAAFDPFKSAPLGAEPALSS 94
G QG + P P PPG +P G D KS + P
Sbjct: 55 GKPQGPPPQGGNKPQGPPPPG--------------KPQGPPPQGD--KSRSPRSPPGKPQ 98
Query: 95 GAVPRARRPPRRPHPPARLPGRGTPFGPPRDLHTHTLARTRAPLPPGASGGSPPPSG 151
G P+ P+ P PP G P GPP R + P PPG G PPP G
Sbjct: 99 GPPPQGGNQPQGPPPPP-----GKPQGPPPQGGN----RPQGPPPPGKPQG-PPPQG 145
Score = 39.7 bits (91), Expect = 0.001
Identities = 34/117 (29%), Positives = 41/117 (35%), Gaps = 26/117 (22%)
Query: 35 GSEQGEEQEAAEHPSAPRPPGHGCARAAASFGRASRPLGSGAAFDPFKSAPLGAEPALSS 94
G QG + P P PPG +P G D KS + P
Sbjct: 116 GKPQGPPPQGGNRPQGPPPPG--------------KPQGPPPQGD--KSRSPRSPPGKPQ 159
Query: 95 GAVPRARRPPRRPHPPARLPGRGTPFGPPRDLHTHTLARTRAPLPPGASGGSPPPSG 151
G P+ P+ P PP G P GPP + + P PPG G PPP G
Sbjct: 160 GPPPQGGNQPQGPPPPP-----GKPQGPP----PQGGKKPQGPPPPGKPQG-PPPQG 206
Score = 33.1 bits (74), Expect = 0.092
Identities = 36/118 (30%), Positives = 45/118 (38%), Gaps = 12/118 (10%)
Query: 35 GSEQGEEQEAAEHPSAPRPPGHGCARAAASFGRASRPLGSGAAFDPFKSAPLGAEPALSS 94
G QG + P P PP G + G ++P G P P G PA
Sbjct: 217 GKPQGPPPQGGNQPQGPPPPP-GKPQGPPPQG-GNKPQGP-----PPPGKPQGP-PAQGG 268
Query: 95 GAVPRARRPPRRPHPPARLPGRGTPFGPPRDLHTHTLARTRAPLPPGASGGSP-PPSG 151
AR PP +P P + G P GPP + + +AP P G G P PP G
Sbjct: 269 SKSQSARSPPGKPQGPPQQEG-NNPQGPPPPAGGNP-QQPQAP-PAGQPQGPPRPPQG 323
Score = 30.8 bits (68), Expect = 0.46
Identities = 24/94 (25%), Positives = 31/94 (32%), Gaps = 4/94 (4%)
Query: 35 GSEQGEEQEAAEHPSAPRPPG--HGCARAAASFGRASRPLGSGAAFDPFKSA--PLGAEP 90
G QG + P P PPG G S +++R P + P G P
Sbjct: 238 GKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPP 297
Query: 91 ALSSGAVPRARRPPRRPHPPARLPGRGTPFGPPR 124
P +P P R P G P PP+
Sbjct: 298 PAGGNPQQPQAPPAGQPQGPPRPPQGGRPSRPPQ 331
Score = 29.6 bits (65), Expect = 1.0
Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 10/57 (17%)
Query: 95 GAVPRARRPPRRPHPPARLPGRGTPFGPPRDLHTHTLARTRAPLPPGASGGSPPPSG 151
G P+ P+ P PP G P GPP + + P PPG G PPP G
Sbjct: 38 GPSPQGGNKPQGPPPPP-----GKPQGPPPQGGN----KPQGPPPPGKPQG-PPPQG 84
>gi|239755509 PREDICTED: hypothetical protein [Homo sapiens]
Length = 344
Score = 40.0 bits (92), Expect = 8e-04
Identities = 50/152 (32%), Positives = 57/152 (37%), Gaps = 35/152 (23%)
Query: 28 PAERGDAGSEQGEEQEAA----EHPSA-PRPPGHGCAR----------------AAASFG 66
P ERG G +G +AA H A P P G AR AAA FG
Sbjct: 178 PQERGGGGRGRGPPSQAAAFSLRHSRAQPWPSGRSAARRRRRLRRRRRRGERAAAAAEFG 237
Query: 67 RASRP-LGSGAAFDPFKSAPLGAEPALSSGAVPR-----ARRPPR-RPHPPARLPGRGTP 119
R + GAA + A L P A PR +R PPR RPHP + PG G
Sbjct: 238 LGGRTCVWQGAAQHRARPAGLARAPR----ARPRDPAGVSRAPPRPRPHPASPAPGDGAL 293
Query: 120 FGPPRDLHTHTLARTRAPLPPGASGGSPPPSG 151
G T A P + SPPP G
Sbjct: 294 RGAEA---TAPAALGLVQPRPKSDIDSPPPRG 322
>gi|239750019 PREDICTED: hypothetical protein [Homo sapiens]
Length = 344
Score = 40.0 bits (92), Expect = 8e-04
Identities = 50/152 (32%), Positives = 57/152 (37%), Gaps = 35/152 (23%)
Query: 28 PAERGDAGSEQGEEQEAA----EHPSA-PRPPGHGCAR----------------AAASFG 66
P ERG G +G +AA H A P P G AR AAA FG
Sbjct: 178 PQERGGGGRGRGPPSQAAAFSLRHSRAQPWPSGRSAARRRRRLRRRRRRGERAAAAAEFG 237
Query: 67 RASRP-LGSGAAFDPFKSAPLGAEPALSSGAVPR-----ARRPPR-RPHPPARLPGRGTP 119
R + GAA + A L P A PR +R PPR RPHP + PG G
Sbjct: 238 LGGRTCVWQGAAQHRARPAGLARAPR----ARPRDPAGVSRAPPRPRPHPASPAPGDGAL 293
Query: 120 FGPPRDLHTHTLARTRAPLPPGASGGSPPPSG 151
G T A P + SPPP G
Sbjct: 294 RGAEA---TAPAALGLVQPRPKSDIDSPPPRG 322
>gi|239744332 PREDICTED: hypothetical protein XP_002343119 [Homo
sapiens]
Length = 344
Score = 40.0 bits (92), Expect = 8e-04
Identities = 50/152 (32%), Positives = 57/152 (37%), Gaps = 35/152 (23%)
Query: 28 PAERGDAGSEQGEEQEAA----EHPSA-PRPPGHGCAR----------------AAASFG 66
P ERG G +G +AA H A P P G AR AAA FG
Sbjct: 178 PQERGGGGRGRGPPSQAAAFSLRHSRAQPWPSGRSAARRRRRLRRRRRRGERAAAAAEFG 237
Query: 67 RASRP-LGSGAAFDPFKSAPLGAEPALSSGAVPR-----ARRPPR-RPHPPARLPGRGTP 119
R + GAA + A L P A PR +R PPR RPHP + PG G
Sbjct: 238 LGGRTCVWQGAAQHRARPAGLARAPR----ARPRDPAGVSRAPPRPRPHPASPAPGDGAL 293
Query: 120 FGPPRDLHTHTLARTRAPLPPGASGGSPPPSG 151
G T A P + SPPP G
Sbjct: 294 RGAEA---TAPAALGLVQPRPKSDIDSPPPRG 322
>gi|160707881 formin 2 [Homo sapiens]
Length = 1722
Score = 40.0 bits (92), Expect = 8e-04
Identities = 34/104 (32%), Positives = 40/104 (38%), Gaps = 19/104 (18%)
Query: 51 PRPPGHGCARAAASFGRASRPLGSGAAFDPFKSAPLGAEPALSSGAVPRARRPPRR---- 106
P PP C +++S G G P P P L S A+P+ PP +
Sbjct: 856 PSPPPLPCTESSSSMP------GLGMVPPPPPPLPGMTVPTLPSTAIPQP--PPLQGTEM 907
Query: 107 -PHPPARLPGRGTPFGPPRDLHTHTLARTRAPLPPGASGGSPPP 149
P PP LPG G P PP PLPP G PPP
Sbjct: 908 LPPPPPPLPGAGIPPPPPLP------GAGILPLPPLPGAGIPPP 945
Score = 34.3 bits (77), Expect = 0.041
Identities = 32/103 (31%), Positives = 34/103 (33%), Gaps = 24/103 (23%)
Query: 48 PSAPRPPGHGCARAAASFGRASRPLGSGAAFDPFKSAPLGAEPALSSGAVPRARRPPRRP 107
P P PG G G PL P A + P L A+P
Sbjct: 910 PPPPPLPGAGIPPPPPLPGAGILPL------PPLPGAGIPPPPPLPGAAIP--------- 954
Query: 108 HPPARLPGRGTPFGPPRDLHTHTLARTRAPLPPGASG-GSPPP 149
PP LPG G P PP L P PP G G PPP
Sbjct: 955 -PPPPLPGAGIPLPPP-------LPGAGIPPPPPLPGAGIPPP 989
Score = 33.1 bits (74), Expect = 0.092
Identities = 27/75 (36%), Positives = 31/75 (41%), Gaps = 10/75 (13%)
Query: 80 PFKSAPLGAEPALSSGAVPRARRPPRRPH----PPARLPGRGTPFGPPRDLHTHTLARTR 135
P A + P L +P PP P PP LPG G P PP L +
Sbjct: 1167 PLPGAGIPPPPPLPGVGIPP---PPPLPGVGIPPPPPLPGAGIP--PPPPLPGMGIPPAP 1221
Query: 136 A-PLPPGASGGSPPP 149
A PLPP +G PPP
Sbjct: 1222 APPLPPPGTGIPPPP 1236
Score = 32.3 bits (72), Expect = 0.16
Identities = 40/133 (30%), Positives = 44/133 (33%), Gaps = 22/133 (16%)
Query: 22 AGLREIPAERGDAGSEQGEEQEAAEHPSAPRPPGHGCARAAASFGRASRPLGSGAAFDPF 81
AG+ +P G AG A P P PG G G P P
Sbjct: 929 AGILPLPPLPG-AGIPPPPPLPGAAIPPPPPLPGAGIPLPPPLPGAGIPPP------PPL 981
Query: 82 KSAPLGAEPALSSGAVPRARRPPRRPH----PPARLPGRGTPFGPPRDLHTHTLARTRAP 137
A + P L +P PP P PP LPG G P PP L P
Sbjct: 982 PGAGIPPPPPLPGAGIPP---PPPLPGAGIPPPPPLPGAGIPPPPP-------LPGAGIP 1031
Query: 138 LPPGASG-GSPPP 149
PP G G PPP
Sbjct: 1032 PPPPLPGAGIPPP 1044
Score = 32.3 bits (72), Expect = 0.16
Identities = 26/75 (34%), Positives = 28/75 (37%), Gaps = 15/75 (20%)
Query: 80 PFKSAPLGAEPALSSGAVPRARRPPRRPH----PPARLPGRGTPFGPPRDLHTHTLARTR 135
P + P L +P PP P PP LPG G P PP L R
Sbjct: 1101 PLPGVGIPPPPPLPGAGIPP---PPPLPGAGIPPPPPLPGAGIPPPPP-------LPRVG 1150
Query: 136 APLPPGASG-GSPPP 149
P PP G G PPP
Sbjct: 1151 IPPPPPLPGAGIPPP 1165
Score = 32.0 bits (71), Expect = 0.20
Identities = 26/75 (34%), Positives = 28/75 (37%), Gaps = 15/75 (20%)
Query: 80 PFKSAPLGAEPALSSGAVPRARRPPRRPH----PPARLPGRGTPFGPPRDLHTHTLARTR 135
P A + P L +P PP P PP LPG G P PP L
Sbjct: 1123 PLPGAGIPPPPPLPGAGIPP---PPPLPRVGIPPPPPLPGAGIPPPPP-------LPGAG 1172
Query: 136 APLPPGASG-GSPPP 149
P PP G G PPP
Sbjct: 1173 IPPPPPLPGVGIPPP 1187
Score = 31.2 bits (69), Expect = 0.35
Identities = 26/75 (34%), Positives = 28/75 (37%), Gaps = 15/75 (20%)
Query: 80 PFKSAPLGAEPALSSGAVPRARRPPRRPH----PPARLPGRGTPFGPPRDLHTHTLARTR 135
P A + P L +P PP P PP LPG G P PP L
Sbjct: 1002 PLPGAGIPPPPPLPGAGIPP---PPPLPGAGIPPPPPLPGAGIPPPPP-------LPGAG 1051
Query: 136 APLPPGASG-GSPPP 149
P PP G G PPP
Sbjct: 1052 IPPPPPLPGAGIPPP 1066
Score = 31.2 bits (69), Expect = 0.35
Identities = 26/75 (34%), Positives = 28/75 (37%), Gaps = 15/75 (20%)
Query: 80 PFKSAPLGAEPALSSGAVPRARRPPRRPH----PPARLPGRGTPFGPPRDLHTHTLARTR 135
P A + P L +P PP P PP LPG G P PP L
Sbjct: 1024 PLPGAGIPPPPPLPGAGIPP---PPPLPGAGIPPPPPLPGAGIPPPPP-------LPGAG 1073
Query: 136 APLPPGASG-GSPPP 149
P PP G G PPP
Sbjct: 1074 IPPPPPLPGAGIPPP 1088
Score = 31.2 bits (69), Expect = 0.35
Identities = 26/75 (34%), Positives = 28/75 (37%), Gaps = 15/75 (20%)
Query: 80 PFKSAPLGAEPALSSGAVPRARRPPRRPH----PPARLPGRGTPFGPPRDLHTHTLARTR 135
P A + P L +P PP P PP LPG G P PP L
Sbjct: 1046 PLPGAGIPPPPPLPGAGIPP---PPPLPGAGIPPPPPLPGAGIPPPPP-------LPGAG 1095
Query: 136 APLPPGASG-GSPPP 149
P PP G G PPP
Sbjct: 1096 IPPPPPLPGVGIPPP 1110
Score = 30.4 bits (67), Expect = 0.60
Identities = 26/75 (34%), Positives = 28/75 (37%), Gaps = 15/75 (20%)
Query: 80 PFKSAPLGAEPALSSGAVPRARRPPRRPH----PPARLPGRGTPFGPPRDLHTHTLARTR 135
P A + P L +P PP P PP LPG G P PP L
Sbjct: 1068 PLPGAGIPPPPPLPGAGIPP---PPPLPGAGIPPPPPLPGVGIPPPPP-------LPGAG 1117
Query: 136 APLPPGASG-GSPPP 149
P PP G G PPP
Sbjct: 1118 IPPPPPLPGAGIPPP 1132
Score = 28.5 bits (62), Expect = 2.3
Identities = 22/61 (36%), Positives = 23/61 (37%), Gaps = 8/61 (13%)
Query: 90 PALSSGAVPRARRPPRRPHPPARLPGRGTPFGPPRDLHTHTLARTRAPLPPGASG-GSPP 148
P +G P P PP LPG G P PP L P PP G G PP
Sbjct: 1156 PLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPP-------LPGVGIPPPPPLPGAGIPP 1208
Query: 149 P 149
P
Sbjct: 1209 P 1209
>gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens]
Length = 663
Score = 40.0 bits (92), Expect = 8e-04
Identities = 45/144 (31%), Positives = 53/144 (36%), Gaps = 33/144 (22%)
Query: 3 LTGGPEVASR-VHSDLAGSAAGLR--EIPAERGDAGSEQGEEQEAAEHPSAPRPPGHG-- 57
+TG P +A HS L + A LR ++ A+ G A + G E A PP
Sbjct: 53 MTGFPALAGPPAHSQLRAAVAHLRLRDLGADPGVATTPLGPEHMAQASTLGLSPPSQAFP 112
Query: 58 --------CARAAASF---GRASRPLGSGAAFDPFKSAPLGAEPALSSGAVPRARRPPRR 106
ARAAA G S P G G SSGA P A PP
Sbjct: 113 AHPEAPAAAARAAALVAHPGAGSYPCGGG-----------------SSGAQPSAPPPPAP 155
Query: 107 PHPPARLPGRGTPFGPPRDLHTHT 130
P PP P P PP L +T
Sbjct: 156 PLPPTPSPPPPPPPPPPPALSGYT 179
Score = 31.6 bits (70), Expect = 0.27
Identities = 39/132 (29%), Positives = 47/132 (35%), Gaps = 38/132 (28%)
Query: 42 QEAAEHPSAPRPPGHGCARAAASFGRASRPLGSGAAFDP-FKSAPLGAE---PALSSGAV 97
Q P+ PP H RAA + R R LG+ DP + PLG E A + G
Sbjct: 51 QNMTGFPALAGPPAHSQLRAAVAHLRL-RDLGA----DPGVATTPLGPEHMAQASTLGLS 105
Query: 98 PRARRPPRRPHPPARL---------PGRGT-----------PFGPPRDLHTHTLARTRAP 137
P ++ P P PA PG G+ P PP P
Sbjct: 106 PPSQAFPAHPEAPAAAARAAALVAHPGAGSYPCGGGSSGAQPSAPPPPA---------PP 156
Query: 138 LPPGASGGSPPP 149
LPP S PPP
Sbjct: 157 LPPTPSPPPPPP 168
Score = 29.3 bits (64), Expect = 1.3
Identities = 27/95 (28%), Positives = 34/95 (35%), Gaps = 5/95 (5%)
Query: 39 GEEQEAAEHPSAPRPPGHGCARAAASFGRASRPLGSG--AAFDPFKSAP--LGAEPALSS 94
GE++ P P PP H ++ G + P GSG A F P G P +
Sbjct: 219 GEQRSGTGSPQHPAPPPHSAGMFISASGTYAGPDGSGGPALFPALHDTPGAPGGHPHPLN 278
Query: 95 GAVPRARRPPRRPHPPARLPGRGTPFGPPRDLHTH 129
G + R A L GR P PR H
Sbjct: 279 GQM-RLGLAAAAAAAAAELYGRAEPPFAPRSGDAH 312
>gi|239750586 PREDICTED: hypothetical protein XP_002347439 [Homo
sapiens]
Length = 300
Score = 39.7 bits (91), Expect = 0.001
Identities = 43/136 (31%), Positives = 50/136 (36%), Gaps = 12/136 (8%)
Query: 24 LREIPAERGDAGSEQGE-EQEAAEHPSAPRPPGHGCARAAASFGRASRPLGSGAAFDPFK 82
LR P E G +E G ++ + P+A P G A GRA R G GAA K
Sbjct: 14 LRVGPCECGGGAAEAGRGPRQRFQPPAAASLPRIGSAPPGG--GRALRRGGRGAARRKRK 71
Query: 83 S-APLGAEPALSSGAVPRARRPPRRPHPPARLPGRGTPFGPPRDLHTHTLA--------R 133
AP S P+ PPR P PA PF P LH +
Sbjct: 72 RRAPAPVCHHRGSPGSPKFVSPPRSPGSPAGAAQVPPPFPPVPGLHALLVCGQPRSREWT 131
Query: 134 TRAPLPPGASGGSPPP 149
R LPP PPP
Sbjct: 132 ERVQLPPRGRAWPPPP 147
Score = 34.7 bits (78), Expect = 0.032
Identities = 33/110 (30%), Positives = 41/110 (37%), Gaps = 17/110 (15%)
Query: 51 PRPPGHG--------CARAAASFGRASRPL---GSGAAFDPFKSAPLGAEPALSSGAVPR 99
P PP G C AA GR R + A+ SAP G AL G
Sbjct: 6 PLPPHGGRLRVGPCECGGGAAEAGRGPRQRFQPPAAASLPRIGSAPPGGGRALRRGGRGA 65
Query: 100 ARRPPRRPHPPARLPGRGTPFGPPRDLHTHTLARTRAPLPPGASGGSPPP 149
ARR +R P RG+P P ++ R+P P + PPP
Sbjct: 66 ARRKRKRRAPAPVCHHRGSPGSP------KFVSPPRSPGSPAGAAQVPPP 109
>gi|239744883 PREDICTED: hypothetical protein XP_002344274 [Homo
sapiens]
Length = 300
Score = 39.7 bits (91), Expect = 0.001
Identities = 43/136 (31%), Positives = 50/136 (36%), Gaps = 12/136 (8%)
Query: 24 LREIPAERGDAGSEQGE-EQEAAEHPSAPRPPGHGCARAAASFGRASRPLGSGAAFDPFK 82
LR P E G +E G ++ + P+A P G A GRA R G GAA K
Sbjct: 14 LRVGPCECGGGAAEAGRGPRQRFQPPAAASLPRIGSAPPGG--GRALRRGGRGAARRKRK 71
Query: 83 S-APLGAEPALSSGAVPRARRPPRRPHPPARLPGRGTPFGPPRDLHTHTLA--------R 133
AP S P+ PPR P PA PF P LH +
Sbjct: 72 RRAPAPVCHHRGSPGSPKFVSPPRSPGSPAGAAQVPPPFPPVPGLHALLVCGQPRSREWT 131
Query: 134 TRAPLPPGASGGSPPP 149
R LPP PPP
Sbjct: 132 ERVQLPPRGRAWPPPP 147
Score = 34.7 bits (78), Expect = 0.032
Identities = 33/110 (30%), Positives = 41/110 (37%), Gaps = 17/110 (15%)
Query: 51 PRPPGHG--------CARAAASFGRASRPL---GSGAAFDPFKSAPLGAEPALSSGAVPR 99
P PP G C AA GR R + A+ SAP G AL G
Sbjct: 6 PLPPHGGRLRVGPCECGGGAAEAGRGPRQRFQPPAAASLPRIGSAPPGGGRALRRGGRGA 65
Query: 100 ARRPPRRPHPPARLPGRGTPFGPPRDLHTHTLARTRAPLPPGASGGSPPP 149
ARR +R P RG+P P ++ R+P P + PPP
Sbjct: 66 ARRKRKRRAPAPVCHHRGSPGSP------KFVSPPRSPGSPAGAAQVPPP 109
>gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo
sapiens]
Length = 505
Score = 39.3 bits (90), Expect = 0.001
Identities = 40/112 (35%), Positives = 42/112 (37%), Gaps = 19/112 (16%)
Query: 48 PSAPRPPGHGCARAAASFGRASRPL-GSGAAFDPFKSAPLGAEP----ALSSGAVPRARR 102
P P PP H G P G GA P AP A P + S AVP
Sbjct: 287 PPPPPPPPHNS-------GPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVAVPPP-- 337
Query: 103 PPRR--PHPPARLPGR---GTPFGPPRDLHTHTLARTRAPLPPGASGGSPPP 149
PP R P PP LP G P PP L +A P PP G PPP
Sbjct: 338 PPNRMYPPPPPALPSSAPSGPPPPPPSVLGVGPVAPPPPPPPPPPPGPPPPP 389
Score = 35.4 bits (80), Expect = 0.019
Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
Query: 94 SGAVPRARRPPRRPHPPARLPGRGTPFGPPRDLHTHTLARTRAPLPPGASGGSPPP 149
+G V + RR PP P RG P PP H + P PP G+PPP
Sbjct: 262 TGGVEAVKNELRRQAPPPPPPSRGGPPPPPPPPH-----NSGPPPPPARGRGAPPP 312
Score = 33.5 bits (75), Expect = 0.070
Identities = 28/66 (42%), Positives = 29/66 (43%), Gaps = 14/66 (21%)
Query: 90 PALSSGAVPRARRPPRR---PHPPARLPGRGTPFGPPRDLHTHTLARTRAPLPPGASGGS 146
P S G P PP P PPAR GRG P PP + A T AP PP S S
Sbjct: 280 PPPSRGGPPPPPPPPHNSGPPPPPAR--GRGAPPPPP------SRAPTAAPPPPPPSRPS 331
Query: 147 ---PPP 149
PPP
Sbjct: 332 VAVPPP 337
>gi|239747143 PREDICTED: hypothetical protein XP_002343924 [Homo
sapiens]
Length = 319
Score = 39.3 bits (90), Expect = 0.001
Identities = 40/118 (33%), Positives = 47/118 (39%), Gaps = 25/118 (21%)
Query: 32 GDAGSEQGEEQEAAEHPSAPRPPGHGCARAAASFGRASRPLGSGAAFDPFKSAPLGAEPA 91
GD G GEE EA P+ PRP P G G P++ A GA
Sbjct: 194 GDLGD--GEEAEAEAPPAGPRP--------------GPEPAGLGRRPCPYEQAQ-GAMGR 236
Query: 92 LSSGAVPRAR-RPPRRPHPPARLPGRGTPFGPPRDLHTHTLARTRAPLPPGASGGSPP 148
SS P R +PP P + GRG P PR L R +PLP G +PP
Sbjct: 237 RSSEGPPGPRTQPPSSPASVYHVLGRGDPLRVPR-----CLQRPLSPLP--HVGDAPP 287
>gi|116256356 alpha 4 type IV collagen precursor [Homo sapiens]
Length = 1690
Score = 39.3 bits (90), Expect = 0.001
Identities = 39/131 (29%), Positives = 43/131 (32%), Gaps = 13/131 (9%)
Query: 3 LTGGPEVASRVHSDLAGSAAGLREIPAERGDAGSEQGEEQEAAEHPSAPRPPGHGCARAA 62
L+G P + A G IP G G + G E A P P PPGH C R A
Sbjct: 775 LSGVPGIKGPRGDPGCPGAEGPAGIPGFLGLKGPK-GREGHAG-FPGVPGPPGHSCERGA 832
Query: 63 ASF----------GRASRPLGSGAAFDPFKSAPLGAEPALSSGAVPRARRPPRRPHPPAR 112
G P G G D P G + P A PP P P
Sbjct: 833 PGIPGQPGLPGYPGSPGAPGGKGQPGDVGPPGPAGMKGLPGLPGRPGAHGPPGLPGIPGP 892
Query: 113 LPGRGTPFGPP 123
G P GPP
Sbjct: 893 FGDDGLP-GPP 902
Score = 32.7 bits (73), Expect = 0.12
Identities = 38/124 (30%), Positives = 45/124 (36%), Gaps = 10/124 (8%)
Query: 6 GPEVASRVHSDLAGSAAGLREIPAERGDAGSEQGEEQEAAEHPSAPRPPG-HGCARAAAS 64
G + AS +H G+ + ERGD GS P PPG G A +
Sbjct: 1187 GTKGASGLHDVGPPGPVGIPGLKGERGDPGSPGISPPGPRGKKGPPGPPGSSGPPGPAGA 1246
Query: 65 FGRASR----PLGSGAAFDPFKSAPLGAE-PALSSGAVPRARRPPRRPHPPARLPGRGTP 119
GRA + P G P P GA P G+V R P LPG P
Sbjct: 1247 TGRAPKDIPDPGPPGDQGPPGPDGPRGAPGPPGLPGSVDLLRGEP----GDCGLPGPPGP 1302
Query: 120 FGPP 123
GPP
Sbjct: 1303 PGPP 1306
>gi|27436927 synoviolin 1 isoform b [Homo sapiens]
Length = 617
Score = 38.9 bits (89), Expect = 0.002
Identities = 35/105 (33%), Positives = 39/105 (37%), Gaps = 14/105 (13%)
Query: 48 PSAPRPPGHGCARAAASFGRA--SRPLGSGAAFDPFKSAPLGAEPAL--SSGAVPRARRP 103
P P PP G A A S A SRP G+ SA + A SG+ P A
Sbjct: 392 PPVPPPPSSGEAVAPPSTSAAALSRPSGAATTTAAGTSATAASATASGPGSGSAPEAGPA 451
Query: 104 PRRPHPPARLPGRGTPFGPPRDLHTHTLARTRAPLPPGASGGSPP 148
P P PP P G P PP A P+PP G P
Sbjct: 452 PGFPFPP---PWMGMPLPPP-------FAFPPMPVPPAGFAGLTP 486
Score = 27.3 bits (59), Expect = 5.0
Identities = 24/69 (34%), Positives = 26/69 (37%), Gaps = 4/69 (5%)
Query: 84 APLGAEPALSSGAVPRARRPPRRPHPPARLPGRGTPFGPPRDLHTHTLARTRAPLPPGAS 143
+P EPA G P PP P PP G PF PP P+PP S
Sbjct: 342 SPPPPEPA-DQGPPPAPHPPPLLPQPPNFPQGLLPPF-PPGMFPLWPPMGPFPPVPPPPS 399
Query: 144 GGS--PPPS 150
G PPS
Sbjct: 400 SGEAVAPPS 408
>gi|241982780 programmed cell death 6 interacting protein isoform 2
[Homo sapiens]
Length = 873
Score = 38.9 bits (89), Expect = 0.002
Identities = 26/84 (30%), Positives = 32/84 (38%), Gaps = 3/84 (3%)
Query: 68 ASRPLGSGAAFDPFKSAPLGAEPALSSGAVPRARRPPRRPHPPARLPGRGTPF--GPPRD 125
A P ++S+P G PR PP +P PPAR P P P
Sbjct: 719 AREPSAPSIPTPAYQSSPAGGHAPTPPTPAPRTM-PPTKPQPPARPPPPVLPANRAPSAT 777
Query: 126 LHTHTLARTRAPLPPGASGGSPPP 149
+ A T AP P G +PPP
Sbjct: 778 APSPVGAGTAAPAPSQTPGSAPPP 801
>gi|22027538 programmed cell death 6 interacting protein isoform 1
[Homo sapiens]
Length = 868
Score = 38.9 bits (89), Expect = 0.002
Identities = 26/84 (30%), Positives = 32/84 (38%), Gaps = 3/84 (3%)
Query: 68 ASRPLGSGAAFDPFKSAPLGAEPALSSGAVPRARRPPRRPHPPARLPGRGTPF--GPPRD 125
A P ++S+P G PR PP +P PPAR P P P
Sbjct: 714 AREPSAPSIPTPAYQSSPAGGHAPTPPTPAPRTM-PPTKPQPPARPPPPVLPANRAPSAT 772
Query: 126 LHTHTLARTRAPLPPGASGGSPPP 149
+ A T AP P G +PPP
Sbjct: 773 APSPVGAGTAAPAPSQTPGSAPPP 796
>gi|239741995 PREDICTED: hypothetical protein XP_002342368 [Homo
sapiens]
Length = 224
Score = 38.9 bits (89), Expect = 0.002
Identities = 49/174 (28%), Positives = 64/174 (36%), Gaps = 29/174 (16%)
Query: 3 LTGGPEVASRVHS-DLAGSAAGLREI--PAERGDAGSEQGEEQEAAEHP---SAPRPPGH 56
L GGP+VA+R G G R A RG+ G + A P +AP P
Sbjct: 51 LEGGPQVAARGGGRGWEGGGLGARRAVTAARRGEWGRARESRSAALASPRVSNAPTTPAS 110
Query: 57 GCARAAASFGRASRPL--GSGAAFDPFKSAPL-------GAEPALSSGAVPRARRPPRRP 107
A ++ R G GA +P + P G ++GA PR R P
Sbjct: 111 RNPGLRAQERQSGRRAAGGGGARAEPPRVPPCRPAGCSGGNRSRRAAGAGPRTTRRKPPP 170
Query: 108 HPPARLPGRG--------TPFGPPRDLHTH------TLARTRAPLPPGASGGSP 147
PP P G P+ P +H + L +T A PP A G SP
Sbjct: 171 RPPGTAPAAGLRSVHLLRIPYKEPLLVHQNYRGPSAQLPQTLAVGPPMAVGTSP 224
>gi|4507125 small nuclear ribonucleoprotein polypeptide B/B' isoform
B [Homo sapiens]
Length = 231
Score = 38.9 bits (89), Expect = 0.002
Identities = 46/146 (31%), Positives = 56/146 (38%), Gaps = 24/146 (16%)
Query: 5 GGPEVASRVHSDLAGSAAGLREIPAERGDAGSEQGEEQEAAEHPSAPRPPGHGCARAAAS 64
GGP + G AG+ A G AG +G + + P G G AAA+
Sbjct: 102 GGPGIGRAAGR---GIPAGVPMPQAPAGLAGPVRGVGGPSQQ---VMTPQGRGTVAAAAA 155
Query: 65 FGRASRPLGSGAAFDPFKSAP-----LGAEPALSSGAVPRARRPPRRPHPPARLPGRGTP 119
AS G+ + P + P GA P G P RPP P P PGRGTP
Sbjct: 156 AATASIA-GAPTQYPPGRGGPPPPMGRGAPPPGMMGPPP-GMRPPMGP-PMGIPPGRGTP 212
Query: 120 FG-PPRDLHTHTLARTRAPLPPGASG 144
G PP + P PPG G
Sbjct: 213 MGMPPPGMR---------PPPPGMRG 229
>gi|149999378 inverted formin 2 isoform 2 [Homo sapiens]
Length = 1240
Score = 38.9 bits (89), Expect = 0.002
Identities = 37/116 (31%), Positives = 42/116 (36%), Gaps = 20/116 (17%)
Query: 41 EQEAAEHPSAPRPPGHGCARAAASFGRASRPLGSGAAFDPFKSAPLGAEPALSSGAVPRA 100
EQ+A+ P P PP + A PL S A + P P L + A P
Sbjct: 415 EQQASTPPPPPPPPLLPGSSAEPPPPPPPPPLPSVGAKALPTAPPPPPLPGLGAMAPPAP 474
Query: 101 RRPPRRPH-------PPARLPGRGTPFGPPRDLHTHTLARTRAPLPPGASGGSPPP 149
PP P PP LPG G P PP PL PG G PPP
Sbjct: 475 PLPPPLPGSCEFLPPPPPPLPGLGCPPPPP-------------PLLPGMGWGPPPP 517
Score = 27.3 bits (59), Expect = 5.0
Identities = 33/123 (26%), Positives = 45/123 (36%), Gaps = 20/123 (16%)
Query: 34 AGSEQGEEQEAAEHPSAPRPPGHGCARAAASFGRASRPLGSGAAFDPFK-SAPLGAEPAL 92
A +Q + + ++ + P+P G AAA+ A P+ + K S P E
Sbjct: 362 ANLDQSQRGSSPQNTTTPKPSVEGQQPAAAA---ACEPVDHAQSESILKVSQPRALEQQA 418
Query: 93 SSGAVPRARRPPRRPHPPARLPGRGT----PFGPPRDLHTHTLARTRAPLP---PGASGG 145
S+ P P PP LPG P PP A AP P PG
Sbjct: 419 ST---------PPPPPPPPLLPGSSAEPPPPPPPPPLPSVGAKALPTAPPPPPLPGLGAM 469
Query: 146 SPP 148
+PP
Sbjct: 470 APP 472
>gi|149999380 inverted formin 2 isoform 1 [Homo sapiens]
Length = 1249
Score = 38.9 bits (89), Expect = 0.002
Identities = 37/116 (31%), Positives = 42/116 (36%), Gaps = 20/116 (17%)
Query: 41 EQEAAEHPSAPRPPGHGCARAAASFGRASRPLGSGAAFDPFKSAPLGAEPALSSGAVPRA 100
EQ+A+ P P PP + A PL S A + P P L + A P
Sbjct: 415 EQQASTPPPPPPPPLLPGSSAEPPPPPPPPPLPSVGAKALPTAPPPPPLPGLGAMAPPAP 474
Query: 101 RRPPRRPH-------PPARLPGRGTPFGPPRDLHTHTLARTRAPLPPGASGGSPPP 149
PP P PP LPG G P PP PL PG G PPP
Sbjct: 475 PLPPPLPGSCEFLPPPPPPLPGLGCPPPPP-------------PLLPGMGWGPPPP 517
Score = 27.3 bits (59), Expect = 5.0
Identities = 33/123 (26%), Positives = 45/123 (36%), Gaps = 20/123 (16%)
Query: 34 AGSEQGEEQEAAEHPSAPRPPGHGCARAAASFGRASRPLGSGAAFDPFK-SAPLGAEPAL 92
A +Q + + ++ + P+P G AAA+ A P+ + K S P E
Sbjct: 362 ANLDQSQRGSSPQNTTTPKPSVEGQQPAAAA---ACEPVDHAQSESILKVSQPRALEQQA 418
Query: 93 SSGAVPRARRPPRRPHPPARLPGRGT----PFGPPRDLHTHTLARTRAPLP---PGASGG 145
S+ P P PP LPG P PP A AP P PG
Sbjct: 419 ST---------PPPPPPPPLLPGSSAEPPPPPPPPPLPSVGAKALPTAPPPPPLPGLGAM 469
Query: 146 SPP 148
+PP
Sbjct: 470 APP 472
>gi|148727255 microtubule associated serine/threonine kinase family
member 4 isoform a [Homo sapiens]
Length = 2434
Score = 38.9 bits (89), Expect = 0.002
Identities = 40/160 (25%), Positives = 56/160 (35%), Gaps = 28/160 (17%)
Query: 17 LAGSAAGLREIPAERGDAGSEQGEEQEAAEHPSAPRPPGH-GCARAAASFGRASRPLGSG 75
L+G A E+P+ + A+ P P G +A +S +
Sbjct: 1621 LSGPQASKTELPSPESAQSPSPSGDVRASVPPVLPSSSGKKNDTTSARELSPSSLKMNKS 1680
Query: 76 AAFDPFKSAP---LGAEPALSSGAVPRARRPPRRPHPPARLPGRGTPFGPPR-------- 124
+P+ P L PA+S P +R + PHP AR PG P +
Sbjct: 1681 YLLEPWFLPPSRGLQNSPAVSLPD-PEFKRDRKGPHPTARSPGTVMESNPQQREGSSPKH 1739
Query: 125 ---------------DLHTHTLARTRAPLPPGASGGSPPP 149
+LH+ LAR R PLPP AS P
Sbjct: 1740 QDHTTDPKLLTCLGQNLHSPDLARPRCPLPPEASPSREKP 1779
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 38.9 bits (89), Expect = 0.002
Identities = 37/115 (32%), Positives = 47/115 (40%), Gaps = 16/115 (13%)
Query: 37 EQGEEQEAAEHPSAPRPPGHGCARAAASFGRASRPLGSGAAFDPFKSAPLGAEPALSSGA 96
+Q Q+ H P P H + +S+P+ A P + +G+ P SS A
Sbjct: 75 QQPPPQQPPPHQPPPHPQPHQQQQPPPPPQDSSKPV---VAQGPGPAPGVGSAPPASSSA 131
Query: 97 VPRARRPPRRPHPPARLPGRGTPFGPPRDLHTHTLARTRAPLPPGASGGSPPPSG 151
P PP PP PG TP PP A T AP PGA +PP SG
Sbjct: 132 PPAT--PPTSGAPPGSGPGP-TPTPPP--------AVTSAP--PGAPPPTPPSSG 173
Score = 26.9 bits (58), Expect = 6.6
Identities = 32/126 (25%), Positives = 43/126 (34%), Gaps = 29/126 (23%)
Query: 47 HPSAPRPPGHGCARAAASFGRASRPLGSGAAFDPFKSAPLGAEPALSSGAVPRARRPPRR 106
H PPG G + P+G G K P+ P P ++PP +
Sbjct: 29 HDFRSPPPGMG-------LNQNRGPMGPGPGQSGPKP-PIPPPPPHQQQQQPPPQQPPPQ 80
Query: 107 PHPPARLPGRGTPFG------PPRDLHTHTLARTRAPLP-----PGASG----------G 145
PP + P P PP+D +A+ P P P AS G
Sbjct: 81 QPPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPTSG 140
Query: 146 SPPPSG 151
+PP SG
Sbjct: 141 APPGSG 146
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 38.9 bits (89), Expect = 0.002
Identities = 34/118 (28%), Positives = 41/118 (34%), Gaps = 5/118 (4%)
Query: 38 QGEEQEAAEHPSAPRPPGHGCARAAASFGRASRPLGSGAAFDPFKSAPLGA--EPALSSG 95
QG Q P +P G S G RP + P G P G
Sbjct: 189 QGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPSQGGNKPQGPPPHPGKPQG 248
Query: 96 AVPRARRPPRRPHPPARLPGRGTPFGPPRDLHTHTLARTRAPLPPGASGGSP--PPSG 151
P+ P+RP PP R G P G P+ + + P PP GG P PP G
Sbjct: 249 PPPQEGNKPQRPPPPGRPQGPPPPGGNPQQPLPPPAGKPQGP-PPPPQGGRPHRPPQG 305
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.133 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,541,999
Number of Sequences: 37866
Number of extensions: 677977
Number of successful extensions: 5971
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 222
Number of HSP's successfully gapped in prelim test: 951
Number of HSP's that attempted gapping in prelim test: 4280
Number of HSP's gapped (non-prelim): 2320
length of query: 151
length of database: 18,247,518
effective HSP length: 93
effective length of query: 58
effective length of database: 14,725,980
effective search space: 854106840
effective search space used: 854106840
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.