Search of human proteins with 239756326

Search of human proteins with 239756326

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239756326 PREDICTED: hypothetical protein isoform 3 [Homo
sapiens]
         (114 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239756326 PREDICTED: hypothetical protein isoform 3 [Homo sap...   228   8e-61
gi|239756324 PREDICTED: hypothetical protein isoform 2 [Homo sap...   228   8e-61
gi|239750836 PREDICTED: hypothetical protein XP_002347575 isofor...   228   8e-61
gi|239750834 PREDICTED: hypothetical protein XP_002347574 isofor...   228   8e-61
gi|239745198 PREDICTED: hypothetical protein XP_002343404 isofor...   228   8e-61
gi|95147356 mitogen-activated protein kinase 15 [Homo sapiens]         33   0.064
gi|4507973 zinc finger protein of the cerebellum 3 [Homo sapiens]      33   0.064
gi|19111150 angiomotin isoform 2 [Homo sapiens]                        30   0.32 
gi|166064029 angiomotin isoform 1 [Homo sapiens]                       30   0.32 
gi|239747100 PREDICTED: hypothetical protein XP_002344493 [Homo ...    30   0.41 
gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]       30   0.41 
gi|45120115 hypothetical protein LOC56905 [Homo sapiens]               30   0.41 
gi|156564238 hypothetical protein LOC129293 [Homo sapiens]             30   0.54 
gi|239750454 PREDICTED: hypothetical protein XP_002347366 [Homo ...    29   0.70 
gi|153945852 G7c protein [Homo sapiens]                                29   0.70 
gi|56549694 enabled homolog isoform a [Homo sapiens]                   29   0.92 
gi|39930375 enabled homolog isoform b [Homo sapiens]                   29   0.92 
gi|47132585 cAMP-dependent protein kinase, regulatory subunit be...    28   1.2  
gi|120587027 ubiquitin specific peptidase 31 [Homo sapiens]            28   1.6  
gi|222080068 pleckstrin homology domain-containing family G memb...    28   2.0  
gi|222080066 pleckstrin homology domain-containing family G memb...    28   2.0  
gi|22035569 GC-rich sequence DNA-binding factor candidate isofor...    28   2.0  
gi|22035565 GC-rich sequence DNA-binding factor candidate isofor...    28   2.0  
gi|48255924 NADH-ubiquinone oxidoreductase flavoprotein 3 isofor...    28   2.0  
gi|225543407 BTB domain protein BDPL [Homo sapiens]                    28   2.0  
gi|190341087 spondin 2, extracellular matrix protein [Homo sapiens]    28   2.0  
gi|6912682 spondin 2, extracellular matrix protein [Homo sapiens]      28   2.0  
gi|30181233 leucine-rich repeats and calponin homology (CH) doma...    28   2.0  
gi|18860918 xylulokinase [Homo sapiens]                                27   2.7  
gi|27436957 membrane associated guanylate kinase, WW and PDZ dom...    27   2.7  

>gi|239756326 PREDICTED: hypothetical protein isoform 3 [Homo
           sapiens]
          Length = 114

 Score =  228 bits (581), Expect = 8e-61
 Identities = 114/114 (100%), Positives = 114/114 (100%)

Query: 1   MNFLLLVAQKSLLALQHFPQLHQTPLRQVLGSLGLEAAGQRAHSARAEAGAAAGTRLPRQ 60
           MNFLLLVAQKSLLALQHFPQLHQTPLRQVLGSLGLEAAGQRAHSARAEAGAAAGTRLPRQ
Sbjct: 1   MNFLLLVAQKSLLALQHFPQLHQTPLRQVLGSLGLEAAGQRAHSARAEAGAAAGTRLPRQ 60

Query: 61  APLLAPDPRTAVTPGHERESPFSRKNGVFFEPNRALLKFRKQTRTGRRGRPQER 114
           APLLAPDPRTAVTPGHERESPFSRKNGVFFEPNRALLKFRKQTRTGRRGRPQER
Sbjct: 61  APLLAPDPRTAVTPGHERESPFSRKNGVFFEPNRALLKFRKQTRTGRRGRPQER 114


>gi|239756324 PREDICTED: hypothetical protein isoform 2 [Homo
           sapiens]
          Length = 194

 Score =  228 bits (581), Expect = 8e-61
 Identities = 114/114 (100%), Positives = 114/114 (100%)

Query: 1   MNFLLLVAQKSLLALQHFPQLHQTPLRQVLGSLGLEAAGQRAHSARAEAGAAAGTRLPRQ 60
           MNFLLLVAQKSLLALQHFPQLHQTPLRQVLGSLGLEAAGQRAHSARAEAGAAAGTRLPRQ
Sbjct: 81  MNFLLLVAQKSLLALQHFPQLHQTPLRQVLGSLGLEAAGQRAHSARAEAGAAAGTRLPRQ 140

Query: 61  APLLAPDPRTAVTPGHERESPFSRKNGVFFEPNRALLKFRKQTRTGRRGRPQER 114
           APLLAPDPRTAVTPGHERESPFSRKNGVFFEPNRALLKFRKQTRTGRRGRPQER
Sbjct: 141 APLLAPDPRTAVTPGHERESPFSRKNGVFFEPNRALLKFRKQTRTGRRGRPQER 194


>gi|239750836 PREDICTED: hypothetical protein XP_002347575 isoform 2
           [Homo sapiens]
          Length = 114

 Score =  228 bits (581), Expect = 8e-61
 Identities = 114/114 (100%), Positives = 114/114 (100%)

Query: 1   MNFLLLVAQKSLLALQHFPQLHQTPLRQVLGSLGLEAAGQRAHSARAEAGAAAGTRLPRQ 60
           MNFLLLVAQKSLLALQHFPQLHQTPLRQVLGSLGLEAAGQRAHSARAEAGAAAGTRLPRQ
Sbjct: 1   MNFLLLVAQKSLLALQHFPQLHQTPLRQVLGSLGLEAAGQRAHSARAEAGAAAGTRLPRQ 60

Query: 61  APLLAPDPRTAVTPGHERESPFSRKNGVFFEPNRALLKFRKQTRTGRRGRPQER 114
           APLLAPDPRTAVTPGHERESPFSRKNGVFFEPNRALLKFRKQTRTGRRGRPQER
Sbjct: 61  APLLAPDPRTAVTPGHERESPFSRKNGVFFEPNRALLKFRKQTRTGRRGRPQER 114


>gi|239750834 PREDICTED: hypothetical protein XP_002347574 isoform 1
           [Homo sapiens]
          Length = 194

 Score =  228 bits (581), Expect = 8e-61
 Identities = 114/114 (100%), Positives = 114/114 (100%)

Query: 1   MNFLLLVAQKSLLALQHFPQLHQTPLRQVLGSLGLEAAGQRAHSARAEAGAAAGTRLPRQ 60
           MNFLLLVAQKSLLALQHFPQLHQTPLRQVLGSLGLEAAGQRAHSARAEAGAAAGTRLPRQ
Sbjct: 81  MNFLLLVAQKSLLALQHFPQLHQTPLRQVLGSLGLEAAGQRAHSARAEAGAAAGTRLPRQ 140

Query: 61  APLLAPDPRTAVTPGHERESPFSRKNGVFFEPNRALLKFRKQTRTGRRGRPQER 114
           APLLAPDPRTAVTPGHERESPFSRKNGVFFEPNRALLKFRKQTRTGRRGRPQER
Sbjct: 141 APLLAPDPRTAVTPGHERESPFSRKNGVFFEPNRALLKFRKQTRTGRRGRPQER 194


>gi|239745198 PREDICTED: hypothetical protein XP_002343404 isoform 1
           [Homo sapiens]
          Length = 135

 Score =  228 bits (581), Expect = 8e-61
 Identities = 114/114 (100%), Positives = 114/114 (100%)

Query: 1   MNFLLLVAQKSLLALQHFPQLHQTPLRQVLGSLGLEAAGQRAHSARAEAGAAAGTRLPRQ 60
           MNFLLLVAQKSLLALQHFPQLHQTPLRQVLGSLGLEAAGQRAHSARAEAGAAAGTRLPRQ
Sbjct: 22  MNFLLLVAQKSLLALQHFPQLHQTPLRQVLGSLGLEAAGQRAHSARAEAGAAAGTRLPRQ 81

Query: 61  APLLAPDPRTAVTPGHERESPFSRKNGVFFEPNRALLKFRKQTRTGRRGRPQER 114
           APLLAPDPRTAVTPGHERESPFSRKNGVFFEPNRALLKFRKQTRTGRRGRPQER
Sbjct: 82  APLLAPDPRTAVTPGHERESPFSRKNGVFFEPNRALLKFRKQTRTGRRGRPQER 135


>gi|95147356 mitogen-activated protein kinase 15 [Homo sapiens]
          Length = 544

 Score = 32.7 bits (73), Expect = 0.064
 Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 9/59 (15%)

Query: 31  GSLGLEAAGQRAHSARAEAGAAAGTRLPRQAPLLAPDPRTAVTPGH---ERESPFSRKN 86
           G  G+  +    H  RA+       +LP + P+  P PR   +PGH   E ESP + KN
Sbjct: 357 GPEGVSPSQAHLHKPRADP------QLPSRTPVQGPRPRPQSSPGHDPAEHESPRAAKN 409


>gi|4507973 zinc finger protein of the cerebellum 3 [Homo sapiens]
          Length = 467

 Score = 32.7 bits (73), Expect = 0.064
 Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 1/56 (1%)

Query: 19 PQLHQTPLRQVLGSLGLEAAGQRAHSARAEAGAAAGTRLPRQAPLLAPDPRTAVTP 74
          P+ H+ P R+  G +GL   G   H+A A A AAA    P  A  L+    +A TP
Sbjct: 22 PRHHEMPNREPAG-MGLNPFGDSTHAAAAAAAAAAFKLSPAAAHDLSSGQSSAFTP 76


>gi|19111150 angiomotin isoform 2 [Homo sapiens]
          Length = 675

 Score = 30.4 bits (67), Expect = 0.32
 Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 45  ARAEAGAAAGTRLPRQAPLLAPDPRTAVTPG-HERESPFSRKNG 87
           A A+A A A T+ P  AP +AP P    TP   + E P S   G
Sbjct: 582 AAAQASAPAQTQAPTSAPAVAPTPAPTPTPAVAQAEVPASPATG 625


>gi|166064029 angiomotin isoform 1 [Homo sapiens]
          Length = 1084

 Score = 30.4 bits (67), Expect = 0.32
 Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 45   ARAEAGAAAGTRLPRQAPLLAPDPRTAVTPG-HERESPFSRKNG 87
            A A+A A A T+ P  AP +AP P    TP   + E P S   G
Sbjct: 991  AAAQASAPAQTQAPTSAPAVAPTPAPTPTPAVAQAEVPASPATG 1034


>gi|239747100 PREDICTED: hypothetical protein XP_002344493 [Homo
           sapiens]
          Length = 300

 Score = 30.0 bits (66), Expect = 0.41
 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 3/59 (5%)

Query: 23  QTPLRQVLGSLGLEAAGQRAHSARAEAGAAAGTRLPRQAPLLAPDPRTAVTPGHERESP 81
           + P  +V+G    EAA   A  AR  A  AAG+ +P +    A      + PGH R  P
Sbjct: 238 RAPAARVVGG---EAAATAAARARPRAPLAAGSPVPVRPQDAAARSAAGMQPGHGRRPP 293


>gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]
          Length = 2217

 Score = 30.0 bits (66), Expect = 0.41
 Identities = 24/67 (35%), Positives = 30/67 (44%), Gaps = 3/67 (4%)

Query: 10   KSLLALQHFPQLHQTPLRQVLGSLGLEAAGQRAHSARAEAGAAAGTRLPRQAPLLAPDP- 68
            K++ A Q  P L+Q    Q L  +  +A       ARA     AG  +PR  P  AP P 
Sbjct: 2135 KTVGAAQLKPTLNQLKQTQKLQDMEAQAGWAAPGEARAMTAPRAGVGMPRLPP--APGPL 2192

Query: 69   RTAVTPG 75
             T V PG
Sbjct: 2193 STTVIPG 2199


>gi|45120115 hypothetical protein LOC56905 [Homo sapiens]
          Length = 1047

 Score = 30.0 bits (66), Expect = 0.41
 Identities = 15/39 (38%), Positives = 20/39 (51%)

Query: 45  ARAEAGAAAGTRLPRQAPLLAPDPRTAVTPGHERESPFS 83
           ARA+A A+A    P  AP+  P P +   PG   E  F+
Sbjct: 730 ARAQAPASARDPAPAPAPVAGPAPASTSAPGDSLEQHFT 768


>gi|156564238 hypothetical protein LOC129293 [Homo sapiens]
          Length = 456

 Score = 29.6 bits (65), Expect = 0.54
 Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 6/81 (7%)

Query: 38  AGQRAHSARAEAGAAAGTR----LPRQAPLLAPDPRTAVTPGHERESPFSRKNGVFFEPN 93
           AG+  H  +++  +   T      P+   L  P P  AV+ GH    P   + G    P+
Sbjct: 306 AGRPIHKGKSKKTSTRPTLSTIFAPKVPTLEVPAPE-AVSSGHSTLPPLVSRPGSADTPS 364

Query: 94  RALLKFRKQTRTGRRGRPQER 114
            A  +FRK+ R  +R RP+ R
Sbjct: 365 EAEQRFRKKRRRSQR-RPRLR 384


>gi|239750454 PREDICTED: hypothetical protein XP_002347366 [Homo
          sapiens]
          Length = 144

 Score = 29.3 bits (64), Expect = 0.70
 Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 1/57 (1%)

Query: 31 GSLGLEAAGQRAHSARAEAGAAAGTRLPRQAPLLAPDPRTAVTPGHERESPFSRKNG 87
          G L + A    +   +A  G    T LPR+ PL A DP     P  E   P  R NG
Sbjct: 7  GWLQIPAGNGNSPGVKAAPGPLCLTSLPRKRPLPASDPSWG-APITEARGPGLRSNG 62


>gi|153945852 G7c protein [Homo sapiens]
          Length = 891

 Score = 29.3 bits (64), Expect = 0.70
 Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 2/67 (2%)

Query: 9   QKSLLALQHFPQLHQTPLRQVLGSLGLEAAGQRAHSARAEAGAAAGTRLPRQAP--LLAP 66
           ++ LLA    P L  TP    L  +G +AAG+R H A  +        L    P   LAP
Sbjct: 679 ERGLLAASLSPTLLSTPRPFSLELIGQDAAGRRLHRAAPQPSTVVPVLLELSGPSGFLAP 738

Query: 67  DPRTAVT 73
             +  ++
Sbjct: 739 GSKVPLS 745


>gi|56549694 enabled homolog isoform a [Homo sapiens]
          Length = 591

 Score = 28.9 bits (63), Expect = 0.92
 Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 6/58 (10%)

Query: 19  PQLHQTPLRQVLGSL-----GLEAAGQRAHSARAEAGAAAGTRLPRQAPLLAPDPRTA 71
           P   +TPL  VLG       GL+AA Q A +  ++ G   G   P   P L P P  A
Sbjct: 270 PASVETPLNSVLGDSSASEPGLQAASQPAETP-SQQGIVLGPLAPPPPPPLPPGPAQA 326


>gi|39930375 enabled homolog isoform b [Homo sapiens]
          Length = 570

 Score = 28.9 bits (63), Expect = 0.92
 Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 6/58 (10%)

Query: 19  PQLHQTPLRQVLGSL-----GLEAAGQRAHSARAEAGAAAGTRLPRQAPLLAPDPRTA 71
           P   +TPL  VLG       GL+AA Q A +  ++ G   G   P   P L P P  A
Sbjct: 270 PASVETPLNSVLGDSSASEPGLQAASQPAETP-SQQGIVLGPLAPPPPPPLPPGPAQA 326


>gi|47132585 cAMP-dependent protein kinase, regulatory subunit beta
           2 [Homo sapiens]
          Length = 418

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 23/79 (29%), Positives = 30/79 (37%), Gaps = 6/79 (7%)

Query: 14  ALQHFPQLHQTPLRQVLGSLGLEAAGQRAHSARAEAGAAAGTRLPRQAPLLAPDPRTAVT 73
           ALQHF +L Q   R+     G E           + GAAAG   P +    A +P  + +
Sbjct: 32  ALQHFTRLQQENERKGTARFGHEGR------TWGDLGAAAGGGTPSKGVNFAEEPMQSDS 85

Query: 74  PGHERESPFSRKNGVFFEP 92
              E E       G F  P
Sbjct: 86  EDGEEEEAAPADAGAFNAP 104


>gi|120587027 ubiquitin specific peptidase 31 [Homo sapiens]
          Length = 1352

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 24/87 (27%), Positives = 34/87 (39%), Gaps = 6/87 (6%)

Query: 27   RQVLGSLGLEAAGQ------RAHSARAEAGAAAGTRLPRQAPLLAPDPRTAVTPGHERES 80
            RQ LGS    A         R   ARA  G  AG  +   +      P T++  G +R+S
Sbjct: 1160 RQSLGSDRASATSTSKPNSPRVSQARAGEGRGAGKHVRSSSMASLRSPSTSIKSGLKRDS 1219

Query: 81   PFSRKNGVFFEPNRALLKFRKQTRTGR 107
                K   FF+      + R+ T  G+
Sbjct: 1220 KSEDKGLSFFKSALRQKETRRSTDLGK 1246


>gi|222080068 pleckstrin homology domain-containing family G
          member 6 isoform a [Homo sapiens]
          Length = 790

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 9/73 (12%)

Query: 15 LQHFPQLHQTPLRQVLGSLGLEAAGQRAHSARAEAGAAAGTRLPRQAPLLAPDPRTAVTP 74
          ++ F   H+ PL+ ++ S  +E  G R    RA A + AG   PR  P+L P  R     
Sbjct: 1  MKAFGPPHEGPLQGLVASR-IETYGGRH---RASAQSTAGRLYPRGYPVLDPSRRRL--- 53

Query: 75 GHERESPFSRKNG 87
            ++  PF+R +G
Sbjct: 54 --QQYVPFARGSG 64


>gi|222080066 pleckstrin homology domain-containing family G
          member 6 isoform a [Homo sapiens]
          Length = 790

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 9/73 (12%)

Query: 15 LQHFPQLHQTPLRQVLGSLGLEAAGQRAHSARAEAGAAAGTRLPRQAPLLAPDPRTAVTP 74
          ++ F   H+ PL+ ++ S  +E  G R    RA A + AG   PR  P+L P  R     
Sbjct: 1  MKAFGPPHEGPLQGLVASR-IETYGGRH---RASAQSTAGRLYPRGYPVLDPSRRRL--- 53

Query: 75 GHERESPFSRKNG 87
            ++  PF+R +G
Sbjct: 54 --QQYVPFARGSG 64


>gi|22035569 GC-rich sequence DNA-binding factor candidate isoform 2
           [Homo sapiens]
          Length = 815

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 5/62 (8%)

Query: 48  EAGAAAGTRLPRQAPLL--APDPRTAVTPGHERESPFSRKNGVFFEPNRALLKFRKQTRT 105
           EAG   G R P    LL   P P +A+TPG   E+      G   EP    LK RK+ R 
Sbjct: 41  EAGPGGGDRAPGGESLLGPGPSPPSALTPGLGAEAGGGFPGGA--EPGNG-LKPRKRPRE 97

Query: 106 GR 107
            +
Sbjct: 98  NK 99


>gi|22035565 GC-rich sequence DNA-binding factor candidate isoform 1
           [Homo sapiens]
          Length = 917

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 5/62 (8%)

Query: 48  EAGAAAGTRLPRQAPLL--APDPRTAVTPGHERESPFSRKNGVFFEPNRALLKFRKQTRT 105
           EAG   G R P    LL   P P +A+TPG   E+      G   EP    LK RK+ R 
Sbjct: 41  EAGPGGGDRAPGGESLLGPGPSPPSALTPGLGAEAGGGFPGGA--EPGNG-LKPRKRPRE 97

Query: 106 GR 107
            +
Sbjct: 98  NK 99


>gi|48255924 NADH-ubiquinone oxidoreductase flavoprotein 3 isoform a
           precursor [Homo sapiens]
          Length = 473

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 25/98 (25%), Positives = 36/98 (36%), Gaps = 5/98 (5%)

Query: 15  LQHFPQLHQTPLRQVLGSLGLEAAGQRAHSARAEAGAAAGTRLPRQAPLLAPDPRTAVTP 74
           L+  P  +     +   +L LEA G+    A A      GT+ P   P    D  T    
Sbjct: 380 LETVPVENNHGFHEKTAALKLEAEGEAMEDAAAPGDDRGGTQEPAPVPAEPFDNTTYKNL 439

Query: 75  GHERESPFSRKNGVFFEPNRALLKFRKQTRTGRRGRPQ 112
            H   S ++     F + N  L KFR    +  R  P+
Sbjct: 440 QHHDYSTYT-----FLDLNLELSKFRMPQPSSGRESPR 472


>gi|225543407 BTB domain protein BDPL [Homo sapiens]
          Length = 485

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 7/52 (13%)

Query: 37 AAGQRAHSARAEAGAA----AGTRLPRQAPLLAPDPRTAVTP---GHERESP 81
          A+   A  A + AGAA    AG R P  AP  AP P     P    + +ESP
Sbjct: 9  ASAAAADLANSNAGAAVGRKAGPRSPPSAPAPAPPPPAPAPPTLGNNHQESP 60


>gi|190341087 spondin 2, extracellular matrix protein [Homo
          sapiens]
          Length = 331

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 9/70 (12%)

Query: 26 LRQVLGSLGLEAAGQRAHSARAEA-------GAAAGTRLPRQAPLLAPDPRTAVTPGHER 78
          L   LG+ G    G+   SARA A       G  + T  P+Q PL  P  + +   G   
Sbjct: 18 LLATLGAAGQPLGGESICSARAPAKYSITFTGKWSQTAFPKQYPLFRPPAQWSSLLGAAH 77

Query: 79 ESPFS--RKN 86
           S +S  RKN
Sbjct: 78 SSDYSMWRKN 87


>gi|6912682 spondin 2, extracellular matrix protein [Homo sapiens]
          Length = 331

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 9/70 (12%)

Query: 26 LRQVLGSLGLEAAGQRAHSARAEA-------GAAAGTRLPRQAPLLAPDPRTAVTPGHER 78
          L   LG+ G    G+   SARA A       G  + T  P+Q PL  P  + +   G   
Sbjct: 18 LLATLGAAGQPLGGESICSARAPAKYSITFTGKWSQTAFPKQYPLFRPPAQWSSLLGAAH 77

Query: 79 ESPFS--RKN 86
           S +S  RKN
Sbjct: 78 SSDYSMWRKN 87


>gi|30181233 leucine-rich repeats and calponin homology (CH) domain
           containing 4 [Homo sapiens]
          Length = 683

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 4/63 (6%)

Query: 44  SARAEAGAAAGTRLPRQAPLLAPDPRTAVTPGHERESPFSRKNGVFFEPNRALLKFRKQT 103
           S+ ++AGAAAG   P  AP  + +P     P     +P  R  G    PN  L +   Q+
Sbjct: 460 SSASQAGAAAGQGAPAPAP-ASQEPLPIAGPA---TAPAPRPLGSIQRPNSFLFRSSSQS 515

Query: 104 RTG 106
            +G
Sbjct: 516 GSG 518


>gi|18860918 xylulokinase [Homo sapiens]
          Length = 536

 Score = 27.3 bits (59), Expect = 2.7
 Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 8/68 (11%)

Query: 46  RAEAGAAAGTRLP-RQAPLLAPDPRTAVTPGHERESPFSRKNGVFFEPNRALLKFRKQTR 104
           RA  G A GT +P  +   LAP+PR A TP     SP + +      P  A L+ R  ++
Sbjct: 476 RAFHGLAGGTDVPFSEVVKLAPNPRLAATP-----SPGASQVYEALLPQYAKLEQRILSQ 530

Query: 105 TGRRGRPQ 112
           T  RG P+
Sbjct: 531 T--RGPPE 536


>gi|27436957 membrane associated guanylate kinase, WW and PDZ domain
            containing 2 [Homo sapiens]
          Length = 1455

 Score = 27.3 bits (59), Expect = 2.7
 Identities = 17/42 (40%), Positives = 19/42 (45%)

Query: 34   GLEAAGQRAHSARAEAGAAAGTRLPRQAPLLAPDPRTAVTPG 75
            G    G  A  A   AGA AG R   + P  AP  + AV PG
Sbjct: 1391 GPGGGGSGALEAEGRAGARAGPRPGPRPPGGAPARKAAVAPG 1432


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.134    0.390 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,514,029
Number of Sequences: 37866
Number of extensions: 199369
Number of successful extensions: 1072
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 1039
Number of HSP's gapped (non-prelim): 60
length of query: 114
length of database: 18,247,518
effective HSP length: 84
effective length of query: 30
effective length of database: 15,066,774
effective search space: 452003220
effective search space used: 452003220
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.