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Search of human proteins with 239755994
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239755994 PREDICTED: hypothetical protein [Homo sapiens]
(238 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239755994 PREDICTED: hypothetical protein [Homo sapiens] 515 e-146
gi|239750516 PREDICTED: hypothetical protein [Homo sapiens] 515 e-146
gi|239744811 PREDICTED: hypothetical protein XP_002343278 [Homo ... 515 e-146
gi|239748099 PREDICTED: hypothetical protein [Homo sapiens] 44 2e-04
gi|239751535 PREDICTED: hypothetical protein [Homo sapiens] 41 0.001
gi|239746046 PREDICTED: hypothetical protein XP_002343643 [Homo ... 41 0.001
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 41 0.001
gi|134031945 SCO-spondin [Homo sapiens] 39 0.004
gi|239741995 PREDICTED: hypothetical protein XP_002342368 [Homo ... 37 0.020
gi|169169912 PREDICTED: hypothetical protein [Homo sapiens] 35 0.075
gi|239754042 PREDICTED: similar to hCG1646049 [Homo sapiens] 35 0.075
gi|169179422 PREDICTED: hypothetical protein [Homo sapiens] 35 0.075
gi|239749005 PREDICTED: hypothetical protein [Homo sapiens] 35 0.075
gi|239748572 PREDICTED: similar to hCG1646049 [Homo sapiens] 35 0.075
gi|239743025 PREDICTED: hypothetical protein [Homo sapiens] 35 0.075
gi|169167670 PREDICTED: similar to hCG1646049 [Homo sapiens] 35 0.075
gi|239754911 PREDICTED: hypothetical protein [Homo sapiens] 34 0.097
gi|239749451 PREDICTED: hypothetical protein [Homo sapiens] 34 0.097
gi|239743581 PREDICTED: hypothetical protein [Homo sapiens] 34 0.097
gi|239744552 PREDICTED: hypothetical protein [Homo sapiens] 33 0.17
gi|115511036 alpha-kinase 3 [Homo sapiens] 33 0.17
gi|38787970 tensin like C1 domain containing phosphatase isoform... 33 0.22
gi|38787957 tensin like C1 domain containing phosphatase isoform... 33 0.22
gi|38787941 tensin like C1 domain containing phosphatase isoform... 33 0.22
gi|224593756 hypothetical protein LOC164127 [Homo sapiens] 33 0.28
gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo ... 33 0.28
gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo ... 33 0.28
gi|239508962 PREDICTED: hypothetical protein [Homo sapiens] 33 0.28
gi|54873613 agrin [Homo sapiens] 32 0.37
gi|7661690 coiled-coil domain containing 9 [Homo sapiens] 32 0.37
>gi|239755994 PREDICTED: hypothetical protein [Homo sapiens]
Length = 238
Score = 515 bits (1326), Expect = e-146
Identities = 238/238 (100%), Positives = 238/238 (100%)
Query: 1 MCSPRDDNHNTPEPPPFRKRAGLRLQPIRTREPRVSNLWGGCGRAGGGRGVVWEGPRPWE 60
MCSPRDDNHNTPEPPPFRKRAGLRLQPIRTREPRVSNLWGGCGRAGGGRGVVWEGPRPWE
Sbjct: 1 MCSPRDDNHNTPEPPPFRKRAGLRLQPIRTREPRVSNLWGGCGRAGGGRGVVWEGPRPWE 60
Query: 61 ARTCRVRRGGEAAGVQRPRRGLCTLAAAESGCPSASFTSRWARQGALPPTKTCPRCPSSP 120
ARTCRVRRGGEAAGVQRPRRGLCTLAAAESGCPSASFTSRWARQGALPPTKTCPRCPSSP
Sbjct: 61 ARTCRVRRGGEAAGVQRPRRGLCTLAAAESGCPSASFTSRWARQGALPPTKTCPRCPSSP 120
Query: 121 REGTVTNNNSTQRRLGGEESFRPAAERSPPRLEEKGCRAGGCLPGAAVWGAEATRCAEWG 180
REGTVTNNNSTQRRLGGEESFRPAAERSPPRLEEKGCRAGGCLPGAAVWGAEATRCAEWG
Sbjct: 121 REGTVTNNNSTQRRLGGEESFRPAAERSPPRLEEKGCRAGGCLPGAAVWGAEATRCAEWG 180
Query: 181 AGRGAAPPSLGVLLLLCFSRTLSRARSWETRPGCSRRSLCCRRRCSRQRTPRGGWKPV 238
AGRGAAPPSLGVLLLLCFSRTLSRARSWETRPGCSRRSLCCRRRCSRQRTPRGGWKPV
Sbjct: 181 AGRGAAPPSLGVLLLLCFSRTLSRARSWETRPGCSRRSLCCRRRCSRQRTPRGGWKPV 238
>gi|239750516 PREDICTED: hypothetical protein [Homo sapiens]
Length = 238
Score = 515 bits (1326), Expect = e-146
Identities = 238/238 (100%), Positives = 238/238 (100%)
Query: 1 MCSPRDDNHNTPEPPPFRKRAGLRLQPIRTREPRVSNLWGGCGRAGGGRGVVWEGPRPWE 60
MCSPRDDNHNTPEPPPFRKRAGLRLQPIRTREPRVSNLWGGCGRAGGGRGVVWEGPRPWE
Sbjct: 1 MCSPRDDNHNTPEPPPFRKRAGLRLQPIRTREPRVSNLWGGCGRAGGGRGVVWEGPRPWE 60
Query: 61 ARTCRVRRGGEAAGVQRPRRGLCTLAAAESGCPSASFTSRWARQGALPPTKTCPRCPSSP 120
ARTCRVRRGGEAAGVQRPRRGLCTLAAAESGCPSASFTSRWARQGALPPTKTCPRCPSSP
Sbjct: 61 ARTCRVRRGGEAAGVQRPRRGLCTLAAAESGCPSASFTSRWARQGALPPTKTCPRCPSSP 120
Query: 121 REGTVTNNNSTQRRLGGEESFRPAAERSPPRLEEKGCRAGGCLPGAAVWGAEATRCAEWG 180
REGTVTNNNSTQRRLGGEESFRPAAERSPPRLEEKGCRAGGCLPGAAVWGAEATRCAEWG
Sbjct: 121 REGTVTNNNSTQRRLGGEESFRPAAERSPPRLEEKGCRAGGCLPGAAVWGAEATRCAEWG 180
Query: 181 AGRGAAPPSLGVLLLLCFSRTLSRARSWETRPGCSRRSLCCRRRCSRQRTPRGGWKPV 238
AGRGAAPPSLGVLLLLCFSRTLSRARSWETRPGCSRRSLCCRRRCSRQRTPRGGWKPV
Sbjct: 181 AGRGAAPPSLGVLLLLCFSRTLSRARSWETRPGCSRRSLCCRRRCSRQRTPRGGWKPV 238
>gi|239744811 PREDICTED: hypothetical protein XP_002343278 [Homo
sapiens]
Length = 238
Score = 515 bits (1326), Expect = e-146
Identities = 238/238 (100%), Positives = 238/238 (100%)
Query: 1 MCSPRDDNHNTPEPPPFRKRAGLRLQPIRTREPRVSNLWGGCGRAGGGRGVVWEGPRPWE 60
MCSPRDDNHNTPEPPPFRKRAGLRLQPIRTREPRVSNLWGGCGRAGGGRGVVWEGPRPWE
Sbjct: 1 MCSPRDDNHNTPEPPPFRKRAGLRLQPIRTREPRVSNLWGGCGRAGGGRGVVWEGPRPWE 60
Query: 61 ARTCRVRRGGEAAGVQRPRRGLCTLAAAESGCPSASFTSRWARQGALPPTKTCPRCPSSP 120
ARTCRVRRGGEAAGVQRPRRGLCTLAAAESGCPSASFTSRWARQGALPPTKTCPRCPSSP
Sbjct: 61 ARTCRVRRGGEAAGVQRPRRGLCTLAAAESGCPSASFTSRWARQGALPPTKTCPRCPSSP 120
Query: 121 REGTVTNNNSTQRRLGGEESFRPAAERSPPRLEEKGCRAGGCLPGAAVWGAEATRCAEWG 180
REGTVTNNNSTQRRLGGEESFRPAAERSPPRLEEKGCRAGGCLPGAAVWGAEATRCAEWG
Sbjct: 121 REGTVTNNNSTQRRLGGEESFRPAAERSPPRLEEKGCRAGGCLPGAAVWGAEATRCAEWG 180
Query: 181 AGRGAAPPSLGVLLLLCFSRTLSRARSWETRPGCSRRSLCCRRRCSRQRTPRGGWKPV 238
AGRGAAPPSLGVLLLLCFSRTLSRARSWETRPGCSRRSLCCRRRCSRQRTPRGGWKPV
Sbjct: 181 AGRGAAPPSLGVLLLLCFSRTLSRARSWETRPGCSRRSLCCRRRCSRQRTPRGGWKPV 238
>gi|239748099 PREDICTED: hypothetical protein [Homo sapiens]
Length = 295
Score = 43.5 bits (101), Expect = 2e-04
Identities = 54/179 (30%), Positives = 60/179 (33%), Gaps = 22/179 (12%)
Query: 19 KRAGLRLQPIRTREPRVSNLWGGCGRAGGGRGVVWEGPRPWEARTCRVRRGGEAAGVQRP 78
+ G RLQ RT + GGGRG WEG R R G G RP
Sbjct: 82 EEGGARLQATRTWPAGILEGGPQVAARGGGRG--WEGGGLGARRAVTAARRG---GASRP 136
Query: 79 RRGLCTLAAAE---SGCPSASFTSRWARQGAL--PPTKTCPRCPSSPREGTVTNNNSTQR 133
G AA CP +R +R AL P P P+S G + R
Sbjct: 137 LAGEPWREAARRRPQQCPQWG-RARESRSAALASPRVSNAPTTPASRNPGLRAQERQSGR 195
Query: 134 RLGGEESFRPAAERSPPRLEEKGCRAGGCLPG-----AAVWGAEATRCAEWGAGRGAAP 187
R G R R PP CR GC G AA G TR G AP
Sbjct: 196 RAAGGGGARAEPPRVPP------CRPAGCSGGNRSRRAAGAGPRTTRRKPPPRPPGTAP 248
>gi|239751535 PREDICTED: hypothetical protein [Homo sapiens]
Length = 255
Score = 40.8 bits (94), Expect = 0.001
Identities = 62/218 (28%), Positives = 78/218 (35%), Gaps = 19/218 (8%)
Query: 26 QPIRTREPRVSNLWGGCGRAGGGRGVVWEGPRPWEARTCRVRRGGEAAGVQRPRRGLCTL 85
QP R PR GG G AGGG V R C R +A R G +
Sbjct: 28 QPPAARSPRGPRAGGGGGDAGGGGAPV----RRARGGGCWARAYQDARCFGRGEGGDLQV 83
Query: 86 AAAESGCPSASF-TSRWARQGA--LPPTKTCPRCPSSPREGTVTNNNSTQRRLGGEESFR 142
++ P A F S + QG+ +P P P PR T + + S Q RL +
Sbjct: 84 SSGPGAAPPAEFRASARSAQGSRDVPAGPGFP--PRLPRPFT-SASFSNQTRLRRRSASA 140
Query: 143 PAAERSPPRLEEKGCRA-------GGCLPGAAVWGAEATRCAEWGAGRGAAPPSL--GVL 193
A R P+ GC + GG P A A A A AG G + + G
Sbjct: 141 LPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGGRSRSAFVAGRD 200
Query: 194 LLLCFSRTLSRARSWETRPGCSRRSLCCRRRCSRQRTP 231
L ++ R R R G RR R R R P
Sbjct: 201 AALACAQLPRRPRGAGARRGMRRRLGAGERPAPRPRGP 238
>gi|239746046 PREDICTED: hypothetical protein XP_002343643 [Homo
sapiens]
Length = 255
Score = 40.8 bits (94), Expect = 0.001
Identities = 62/218 (28%), Positives = 78/218 (35%), Gaps = 19/218 (8%)
Query: 26 QPIRTREPRVSNLWGGCGRAGGGRGVVWEGPRPWEARTCRVRRGGEAAGVQRPRRGLCTL 85
QP R PR GG G AGGG V R C R +A R G +
Sbjct: 28 QPPAARSPRGPRAGGGGGDAGGGGAPV----RRARGGGCWARAYQDARCFGRGEGGDLQV 83
Query: 86 AAAESGCPSASF-TSRWARQGA--LPPTKTCPRCPSSPREGTVTNNNSTQRRLGGEESFR 142
++ P A F S + QG+ +P P P PR T + + S Q RL +
Sbjct: 84 SSGPGAAPPAEFRASARSAQGSRDVPAGPGFP--PRLPRPFT-SASFSNQTRLRRRSASA 140
Query: 143 PAAERSPPRLEEKGCRA-------GGCLPGAAVWGAEATRCAEWGAGRGAAPPSL--GVL 193
A R P+ GC + GG P A A A A AG G + + G
Sbjct: 141 LPAPRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGGRSRSAFVAGRD 200
Query: 194 LLLCFSRTLSRARSWETRPGCSRRSLCCRRRCSRQRTP 231
L ++ R R R G RR R R R P
Sbjct: 201 AALACAQLPRRPRGAGARRGMRRRLGAGERPAPRPRGP 238
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 40.8 bits (94), Expect = 0.001
Identities = 61/220 (27%), Positives = 81/220 (36%), Gaps = 25/220 (11%)
Query: 19 KRAGLRLQPIRTREPRVSNLWGGCGRAGGGRGVVWEGPRPWEARTCRVRRGGEAAGVQRP 78
KR R + + R R + WG R+ RG RP +R+ +R G + +R
Sbjct: 502 KRGHSRSRSPQWRRSRSAQRWGR-SRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRG 560
Query: 79 R---RGLCTLAAAESGCPSASFTSRWARQGALPPTKTCPRCPSSPREGTVTNNNS-TQRR 134
R R T + S P+ SR ++T R S R T + S T R
Sbjct: 561 RSHSRSPATRGRSRSRTPARRGRSR---------SRTPARRRSRSRTPTRRRSRSRTPAR 611
Query: 135 LGGEESFRPAAERSPPRLEEKGCRAGGCLPGAAVWGAEATRCAEWGAGRGAAPPSLGVLL 194
G S PA RS R + R+ P + + A G R P G
Sbjct: 612 RGRSRSRTPARRRSRTRSPVRR-RSRSRSPARRSGRSRSRTPARRGRSRSRTPARRG--- 667
Query: 195 LLCFSRTLSRARSWETRPGCSRRSLCCRRRCSRQRTPRGG 234
SR+R+ R G SR RR SR RTPR G
Sbjct: 668 -------RSRSRTPARRSGRSRSRTPARRGRSRSRTPRRG 700
>gi|134031945 SCO-spondin [Homo sapiens]
Length = 5147
Score = 38.9 bits (89), Expect = 0.004
Identities = 45/151 (29%), Positives = 57/151 (37%), Gaps = 30/151 (19%)
Query: 105 GALP----PTKTCPRCPSSPREGTVTNNNSTQRRL---GGEESFRPAAERSPPRLEEKGC 157
G LP P +T CP E T N +L G + RP P EE+GC
Sbjct: 1641 GGLPALGGPNRTGLPCP----EYTCPNGTCIGFQLVCDGQPDCGRPGQVGPSP--EEQGC 1694
Query: 158 RAGGCLPGAAVWGAEATRCAEWGAGRGAAPPSLGVLLL-----------LCFSRTLSRAR 206
A G + WG + C WG GR LG+L+L CF+
Sbjct: 1695 GAWGPW---SPWGPCSRTCGPWGQGRSRRCSPLGLLVLQNCPGPEHQSQACFTAACPVDG 1751
Query: 207 SWETRPGCSRRSLCCRRRCSRQR---TPRGG 234
W T S S CR +RQR +P+ G
Sbjct: 1752 EWSTWSPWSVCSEPCRGTMTRQRQCHSPQNG 1782
Score = 32.7 bits (73), Expect = 0.28
Identities = 39/159 (24%), Positives = 59/159 (37%), Gaps = 50/159 (31%)
Query: 18 RKRAGLRLQPIRTREPRVSNLWGGCGRA-GGGRGVVWEGPRPWEARTCRV---RRGGEAA 73
R+ LR P+ R S W C R+ GGG+ + +R+C + GG
Sbjct: 3993 RRFCNLRACPVPGGWSRWSP-WSWCDRSCGGGQSL--------RSRSCSSPPSKNGGAPC 4043
Query: 74 GVQRPRRGLCTLAAAESGCPSASFTSRWARQGALPPTKTCPRCPSSPREGTVTNNNSTQR 133
+R + LC E+GCP+ A + CPR S +EG V ++
Sbjct: 4044 AGERHQARLCNPMPCEAGCPAGMEVVTCANR--------CPRRCSDLQEGIVCQDD---- 4091
Query: 134 RLGGEESFRPAAERSPPRLEEKGCRA--------GGCLP 164
++ +KGCR GGC+P
Sbjct: 4092 -----------------QVCQKGCRCPKGSLEQDGGCVP 4113
>gi|239741995 PREDICTED: hypothetical protein XP_002342368 [Homo
sapiens]
Length = 224
Score = 36.6 bits (83), Expect = 0.020
Identities = 47/174 (27%), Positives = 53/174 (30%), Gaps = 35/174 (20%)
Query: 19 KRAGLRLQPIRTREPRVSNLWGGCGRAGGGRGVVWEGPRPWEARTCRVRRGGEAAGVQRP 78
+ G RLQ RT + GGGRG WEG R R GE +
Sbjct: 34 EEGGARLQATRTWPAGILEGGPQVAARGGGRG--WEGGGLGARRAVTAARRGEWGRARES 91
Query: 79 RRGLCTLAAAESGCPSASFTSRWARQGALPPTKTCPRCPSSPREGTVTNNNSTQRRLGGE 138
R SA+ S P P P+S G + RR G
Sbjct: 92 R--------------SAALAS--------PRVSNAPTTPASRNPGLRAQERQSGRRAAGG 129
Query: 139 ESFRPAAERSPPRLEEKGCRAGGCLPG-----AAVWGAEATRCAEWGAGRGAAP 187
R R PP CR GC G AA G TR G AP
Sbjct: 130 GGARAEPPRVPP------CRPAGCSGGNRSRRAAGAGPRTTRRKPPPRPPGTAP 177
>gi|169169912 PREDICTED: hypothetical protein [Homo sapiens]
Length = 184
Score = 34.7 bits (78), Expect = 0.075
Identities = 41/138 (29%), Positives = 52/138 (37%), Gaps = 29/138 (21%)
Query: 39 WGGCGRAGGGRGVVWEGPR------PWEARTCRVRR-----------GGEAAGVQRPRRG 81
WG CG A GG G V PR W+ R R G AG P G
Sbjct: 53 WGPCGAARGGTGRVPAPPRACVCAGSWQGHLGRAARVPCASHTHVGGPGPQAG---PACG 109
Query: 82 LCTLAAAESGCPS----ASFTSRWARQGALPP-TKTCPRCPSSPREGTVTNNNSTQRRLG 136
L +A+S P+ A SR G +PP + PR +P + + R +G
Sbjct: 110 FRALGSAQSPGPATAAGAPGFSRALSPGPVPPGWRAAPRA-GAPHQRAAATGSGGSRSVG 168
Query: 137 GEESFRPAAERSPPRLEE 154
G + R A RLEE
Sbjct: 169 GGKHLRIAQSL---RLEE 183
>gi|239754042 PREDICTED: similar to hCG1646049 [Homo sapiens]
Length = 346
Score = 34.7 bits (78), Expect = 0.075
Identities = 58/240 (24%), Positives = 73/240 (30%), Gaps = 33/240 (13%)
Query: 3 SPRDDNHNTPEPPPFRKRAGLRLQPI---RTREPRVSNLWGGCGRAGGGRGVVWEGPRPW 59
S R+ TP PP R + P R + R + G G P P
Sbjct: 54 SERELQARTPAPPRERGESSSPRGPTLRGRAKTTRGRSQGAGATETSAGNSAATAAPHPT 113
Query: 60 EARTCR---------VRRGGEAAGVQRPRRGLCTLAAAESGCPSASFTSRWARQGALPPT 110
A + R G QRP + + P R + G PP
Sbjct: 114 PASYPQGTISPPQLPAPRPKRFGGKQRPLWRIRGWETTVARLPEP----RVGKLGKGPPP 169
Query: 111 KTCP---RCPSSPREGTVTNNNSTQRRLGGEESFRPAAERSPPRLEEKGCRAGGCLPGAA 167
+ P RC R + + + R A R P R G CLP AA
Sbjct: 170 RPAPPGTRCCPGARAAQLLREAAA-----AAQGLRAPAARLPEPTRRAPGRPG-CLPTAA 223
Query: 168 VWGAEATRCAEWGAGRGAAPPSLGVLLLLCFSRTLSRARSWETRPGCSRRSLCCRRRCSR 227
A+A W + R PP+ L RT R TR R CR CSR
Sbjct: 224 AAAADAL----WRSRRAPLPPTE----FLSPRRTRPRKHPERTRRPAQRLESGCRGHCSR 275
>gi|169179422 PREDICTED: hypothetical protein [Homo sapiens]
Length = 645
Score = 34.7 bits (78), Expect = 0.075
Identities = 37/112 (33%), Positives = 46/112 (41%), Gaps = 14/112 (12%)
Query: 46 GGGRGVVWEGPRPWEARTCRVRRGGEAAGVQRPRRGLCTLAAAESGCPSASFTSRWARQG 105
GGG G W G P ART G AGV++ G+ L+ P A+ T A G
Sbjct: 497 GGGTGQKWPGV-PLGART------GLGAGVRQHPGGIAGLSRERGHSPWAALTDSAA--G 547
Query: 106 ALPPTKTCPRCPSSPRE-GTVTNNNSTQRRLGGEESFRPAAERSPPRLEEKG 156
A P PS+PR G+ T + G +S P SPP E G
Sbjct: 548 AELPGLV----PSAPRRPGSATAPRPLRVPGRGAQSAEPGTPPSPPGAEHGG 595
>gi|239749005 PREDICTED: hypothetical protein [Homo sapiens]
Length = 178
Score = 34.7 bits (78), Expect = 0.075
Identities = 41/138 (29%), Positives = 52/138 (37%), Gaps = 29/138 (21%)
Query: 39 WGGCGRAGGGRGVVWEGPR------PWEARTCRVRR-----------GGEAAGVQRPRRG 81
WG CG A GG G V PR W+ R R G AG P G
Sbjct: 47 WGPCGAARGGTGRVPAPPRACVCAGSWQGHLGRAARVPCASHTHVGGPGPQAG---PACG 103
Query: 82 LCTLAAAESGCPS----ASFTSRWARQGALPP-TKTCPRCPSSPREGTVTNNNSTQRRLG 136
L +A+S P+ A SR G +PP + PR +P + + R +G
Sbjct: 104 FRALGSAQSPGPATAAGAPGFSRALSPGPVPPGWRAAPRA-GAPHQRAAATGSGGSRSVG 162
Query: 137 GEESFRPAAERSPPRLEE 154
G + R A RLEE
Sbjct: 163 GGKHLRIAQSL---RLEE 177
>gi|239748572 PREDICTED: similar to hCG1646049 [Homo sapiens]
Length = 346
Score = 34.7 bits (78), Expect = 0.075
Identities = 58/240 (24%), Positives = 73/240 (30%), Gaps = 33/240 (13%)
Query: 3 SPRDDNHNTPEPPPFRKRAGLRLQPI---RTREPRVSNLWGGCGRAGGGRGVVWEGPRPW 59
S R+ TP PP R + P R + R + G G P P
Sbjct: 54 SERELQARTPAPPRERGESSSPRGPTLRGRAKTTRGRSQGAGATETSAGNSAATAAPHPT 113
Query: 60 EARTCR---------VRRGGEAAGVQRPRRGLCTLAAAESGCPSASFTSRWARQGALPPT 110
A + R G QRP + + P R + G PP
Sbjct: 114 PASYPQGTISPPQLPAPRPKRFGGKQRPLWRIRGWETTVARLPEP----RVGKLGKGPPP 169
Query: 111 KTCP---RCPSSPREGTVTNNNSTQRRLGGEESFRPAAERSPPRLEEKGCRAGGCLPGAA 167
+ P RC R + + + R A R P R G CLP AA
Sbjct: 170 RPAPPGTRCCPGARAAQLLREAAA-----AAQGLRAPAARLPEPTRRAPGRPG-CLPTAA 223
Query: 168 VWGAEATRCAEWGAGRGAAPPSLGVLLLLCFSRTLSRARSWETRPGCSRRSLCCRRRCSR 227
A+A W + R PP+ L RT R TR R CR CSR
Sbjct: 224 AAAADAL----WRSRRAPLPPTE----FLSPRRTRPRKHPERTRRPAQRLESGCRGHCSR 275
>gi|239743025 PREDICTED: hypothetical protein [Homo sapiens]
Length = 178
Score = 34.7 bits (78), Expect = 0.075
Identities = 41/138 (29%), Positives = 52/138 (37%), Gaps = 29/138 (21%)
Query: 39 WGGCGRAGGGRGVVWEGPR------PWEARTCRVRR-----------GGEAAGVQRPRRG 81
WG CG A GG G V PR W+ R R G AG P G
Sbjct: 47 WGPCGAARGGTGRVPAPPRACVCAGSWQGHLGRAARVPCASHTHVGGPGPQAG---PACG 103
Query: 82 LCTLAAAESGCPS----ASFTSRWARQGALPP-TKTCPRCPSSPREGTVTNNNSTQRRLG 136
L +A+S P+ A SR G +PP + PR +P + + R +G
Sbjct: 104 FRALGSAQSPGPATAAGAPGFSRALSPGPVPPGWRAAPRA-GAPHQRAAATGSGGSRSVG 162
Query: 137 GEESFRPAAERSPPRLEE 154
G + R A RLEE
Sbjct: 163 GGKHLRIAQSL---RLEE 177
>gi|169167670 PREDICTED: similar to hCG1646049 [Homo sapiens]
Length = 346
Score = 34.7 bits (78), Expect = 0.075
Identities = 58/240 (24%), Positives = 73/240 (30%), Gaps = 33/240 (13%)
Query: 3 SPRDDNHNTPEPPPFRKRAGLRLQPI---RTREPRVSNLWGGCGRAGGGRGVVWEGPRPW 59
S R+ TP PP R + P R + R + G G P P
Sbjct: 54 SERELQARTPAPPRERGESSSPRGPTLRGRAKTTRGRSQGAGATETSAGNSAATAAPHPT 113
Query: 60 EARTCR---------VRRGGEAAGVQRPRRGLCTLAAAESGCPSASFTSRWARQGALPPT 110
A + R G QRP + + P R + G PP
Sbjct: 114 PASYPQGTISPPQLPAPRPKRFGGKQRPLWRIRGWETTVARLPEP----RVGKLGKGPPP 169
Query: 111 KTCP---RCPSSPREGTVTNNNSTQRRLGGEESFRPAAERSPPRLEEKGCRAGGCLPGAA 167
+ P RC R + + + R A R P R G CLP AA
Sbjct: 170 RPAPPGTRCCPGARAAQLLREAAA-----AAQGLRAPAARLPEPTRRAPGRPG-CLPTAA 223
Query: 168 VWGAEATRCAEWGAGRGAAPPSLGVLLLLCFSRTLSRARSWETRPGCSRRSLCCRRRCSR 227
A+A W + R PP+ L RT R TR R CR CSR
Sbjct: 224 AAAADAL----WRSRRAPLPPTE----FLSPRRTRPRKHPERTRRPAQRLESGCRGHCSR 275
>gi|239754911 PREDICTED: hypothetical protein [Homo sapiens]
Length = 297
Score = 34.3 bits (77), Expect = 0.097
Identities = 27/70 (38%), Positives = 31/70 (44%), Gaps = 19/70 (27%)
Query: 55 GPRP------WEARTCRVRRGGEAAGVQRPRRGLCTLAAA-ESGCPSASFTSRWARQGAL 107
GP P W R+C +RRGG A+ RRG T AAA E+ P S W
Sbjct: 149 GPPPLPTSCHWARRSCALRRGGAASW----RRGPGTPAAAPEAPSPPDHSPSPW------ 198
Query: 108 PPTKTCPRCP 117
T CP CP
Sbjct: 199 --TSRCPPCP 206
>gi|239749451 PREDICTED: hypothetical protein [Homo sapiens]
Length = 297
Score = 34.3 bits (77), Expect = 0.097
Identities = 27/70 (38%), Positives = 31/70 (44%), Gaps = 19/70 (27%)
Query: 55 GPRP------WEARTCRVRRGGEAAGVQRPRRGLCTLAAA-ESGCPSASFTSRWARQGAL 107
GP P W R+C +RRGG A+ RRG T AAA E+ P S W
Sbjct: 149 GPPPLPTSCHWARRSCALRRGGAASW----RRGPGTPAAAPEAPSPPDHSPSPW------ 198
Query: 108 PPTKTCPRCP 117
T CP CP
Sbjct: 199 --TSRCPPCP 206
>gi|239743581 PREDICTED: hypothetical protein [Homo sapiens]
Length = 297
Score = 34.3 bits (77), Expect = 0.097
Identities = 27/70 (38%), Positives = 31/70 (44%), Gaps = 19/70 (27%)
Query: 55 GPRP------WEARTCRVRRGGEAAGVQRPRRGLCTLAAA-ESGCPSASFTSRWARQGAL 107
GP P W R+C +RRGG A+ RRG T AAA E+ P S W
Sbjct: 149 GPPPLPTSCHWARRSCALRRGGAASW----RRGPGTPAAAPEAPSPPDHSPSPW------ 198
Query: 108 PPTKTCPRCP 117
T CP CP
Sbjct: 199 --TSRCPPCP 206
>gi|239744552 PREDICTED: hypothetical protein [Homo sapiens]
Length = 221
Score = 33.5 bits (75), Expect = 0.17
Identities = 39/131 (29%), Positives = 48/131 (36%), Gaps = 18/131 (13%)
Query: 39 WGG-----CGRAG--GGRGVVWEGPRPWEARTCRVRRGGEAAGVQRPRRGLCTLAAAESG 91
WGG RAG G+G GP A R RRGG A +RP G AA G
Sbjct: 25 WGGEEVQGLARAGLATGKGQRPPGPGRVRAAQARARRGGGAR--ERPAEGARGPRAARGG 82
Query: 92 CPSASFTSRWARQGALPPTKTCPRCPSSPREGTVTNNNSTQRRLG--------GEESFRP 143
+A S A +G P P P +++ S R G E + +P
Sbjct: 83 ARAAPMPSS-APRGPTEPALRRPSSAERPLAQAPSSSASVGRAPGAMASPSRSSEATGKP 141
Query: 144 AAERSPPRLEE 154
PR EE
Sbjct: 142 RGRDGRPRREE 152
>gi|115511036 alpha-kinase 3 [Homo sapiens]
Length = 1907
Score = 33.5 bits (75), Expect = 0.17
Identities = 30/98 (30%), Positives = 33/98 (33%), Gaps = 13/98 (13%)
Query: 90 SGCPSASFTSRWARQGALPPTKTCPRCPSSPREGTVTNNNSTQRRLGGEESFRPAAERSP 149
SG + WA PP + PRCP R G +T RP A
Sbjct: 117 SGLGAGPGAGTWA---PAPPGVSKPRCPGRARPGEGQQQVTTA---------RPPAINRG 164
Query: 150 PRLEEKGCRAGGCLPGAAVW-GAEATRCAEWGAGRGAA 186
R G A G PGA W EA A G G A
Sbjct: 165 ARQPRAGAAAAGRGPGAGAWRTGEAAASAGPAVGEGGA 202
>gi|38787970 tensin like C1 domain containing phosphatase isoform 3
[Homo sapiens]
Length = 1285
Score = 33.1 bits (74), Expect = 0.22
Identities = 50/204 (24%), Positives = 62/204 (30%), Gaps = 44/204 (21%)
Query: 24 RLQPIRTREPRVSNLWGGCGRAGGGRGV----------------------VWEGPRPWEA 61
R P + L GGCG A GGRG V+ G RP +
Sbjct: 406 RPPPTAAERQELDRLLGGCGVASGGRGAGRETAILDDEEQPTVGGGPHLGVYPGHRPGLS 465
Query: 62 RTCRVRRGGEA------AGVQRPRRGLCTLAAAESGCPSASFTSRWARQGALPPTKTCPR 115
R C R+G G RP L A G + QG + R
Sbjct: 466 RHCSCRQGYREPCGVPNGGYYRPEGTLERRRLAYGGYEGSP-------QGYAEASMEKRR 518
Query: 116 CPSSPREGTVTNNNSTQRRLGGEESFRPAAERSPPRLEEKG---------CRAGGCLPGA 166
S EG + G+ +R R LE+ G C LP A
Sbjct: 519 LCRSLSEGLYPYPPEMGKPATGDFGYRAPGYREVVILEDPGLPALYPCPACEEKLALPTA 578
Query: 167 AVWGAEATRCAEWGAGRGAAPPSL 190
A++G R A G A P L
Sbjct: 579 ALYGLRLEREAGEGWASEAGKPLL 602
>gi|38787957 tensin like C1 domain containing phosphatase isoform 2
[Homo sapiens]
Length = 1409
Score = 33.1 bits (74), Expect = 0.22
Identities = 50/204 (24%), Positives = 62/204 (30%), Gaps = 44/204 (21%)
Query: 24 RLQPIRTREPRVSNLWGGCGRAGGGRGV----------------------VWEGPRPWEA 61
R P + L GGCG A GGRG V+ G RP +
Sbjct: 530 RPPPTAAERQELDRLLGGCGVASGGRGAGRETAILDDEEQPTVGGGPHLGVYPGHRPGLS 589
Query: 62 RTCRVRRGGEA------AGVQRPRRGLCTLAAAESGCPSASFTSRWARQGALPPTKTCPR 115
R C R+G G RP L A G + QG + R
Sbjct: 590 RHCSCRQGYREPCGVPNGGYYRPEGTLERRRLAYGGYEGSP-------QGYAEASMEKRR 642
Query: 116 CPSSPREGTVTNNNSTQRRLGGEESFRPAAERSPPRLEEKG---------CRAGGCLPGA 166
S EG + G+ +R R LE+ G C LP A
Sbjct: 643 LCRSLSEGLYPYPPEMGKPATGDFGYRAPGYREVVILEDPGLPALYPCPACEEKLALPTA 702
Query: 167 AVWGAEATRCAEWGAGRGAAPPSL 190
A++G R A G A P L
Sbjct: 703 ALYGLRLEREAGEGWASEAGKPLL 726
>gi|38787941 tensin like C1 domain containing phosphatase isoform 1
[Homo sapiens]
Length = 1419
Score = 33.1 bits (74), Expect = 0.22
Identities = 50/204 (24%), Positives = 62/204 (30%), Gaps = 44/204 (21%)
Query: 24 RLQPIRTREPRVSNLWGGCGRAGGGRGV----------------------VWEGPRPWEA 61
R P + L GGCG A GGRG V+ G RP +
Sbjct: 540 RPPPTAAERQELDRLLGGCGVASGGRGAGRETAILDDEEQPTVGGGPHLGVYPGHRPGLS 599
Query: 62 RTCRVRRGGEA------AGVQRPRRGLCTLAAAESGCPSASFTSRWARQGALPPTKTCPR 115
R C R+G G RP L A G + QG + R
Sbjct: 600 RHCSCRQGYREPCGVPNGGYYRPEGTLERRRLAYGGYEGSP-------QGYAEASMEKRR 652
Query: 116 CPSSPREGTVTNNNSTQRRLGGEESFRPAAERSPPRLEEKG---------CRAGGCLPGA 166
S EG + G+ +R R LE+ G C LP A
Sbjct: 653 LCRSLSEGLYPYPPEMGKPATGDFGYRAPGYREVVILEDPGLPALYPCPACEEKLALPTA 712
Query: 167 AVWGAEATRCAEWGAGRGAAPPSL 190
A++G R A G A P L
Sbjct: 713 ALYGLRLEREAGEGWASEAGKPLL 736
>gi|224593756 hypothetical protein LOC164127 [Homo sapiens]
Length = 623
Score = 32.7 bits (73), Expect = 0.28
Identities = 36/144 (25%), Positives = 51/144 (35%), Gaps = 18/144 (12%)
Query: 52 VWEGPRPWEARTCRVRRGGEAAGVQRPRRGLCTLAAAESGC------PSASFTSRWARQG 105
+WE PRP R R GG+ +G AES P SFT R R+G
Sbjct: 15 LWEPPRPGGERESTQRLGGQRSGADSTACSRAGTPGAESEAGACWLHPHCSFTPRPRRRG 74
Query: 106 ALPPTKTCPRCPSSPREGTVTNNNSTQRRLGGEESFRPAAERSPPRLEEKGCR-AGGCLP 164
C S R G+ + ++ +R L RP + R E G + P
Sbjct: 75 ----------CSDSLR-GSRSLSDVARRPLERSRKHRPRSRRLEDAWGETGTKPRPAWQP 123
Query: 165 GAAVWGAEATRCAEWGAGRGAAPP 188
+ C + +G +PP
Sbjct: 124 QTQLPPQRPQPCPHYPLAQGDSPP 147
>gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo
sapiens]
Length = 384
Score = 32.7 bits (73), Expect = 0.28
Identities = 45/179 (25%), Positives = 56/179 (31%), Gaps = 40/179 (22%)
Query: 9 HNTPEPPPFRKRAGLRLQPIRTREPRVSNLWGGCGRAGGGRGVVWEGPRPW--EARTCRV 66
H PP R +G + PR S ++G GPRP AR
Sbjct: 87 HPRTRSPPGRSGSGTTFSAV---PPRPSQ-----HQSGSRLRPAAPGPRPGCSSARASPA 138
Query: 67 RRGGEAAGVQRPRRGLCTLAAAES-GCPSASFTSRWARQGALPPTKTCPRCPSSPREGTV 125
+AA P R + S G S +R +R G PP TC RC ++PR
Sbjct: 139 PAAPQAAARTAPGRAASGGSGPGSRGQGSDQVGARPSRAGGQPPPLTCRRCRAAPR---- 194
Query: 126 TNNNSTQRRLGGEESFRPAAERSPPRLEEKGCRAGGCLPGAAVWGAEATRCAEWGAGRG 184
S RP P G G A C WG+G G
Sbjct: 195 -------------RSARPFRRPGLPLKSRPGS------------GTGARSCGTWGSGGG 228
>gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo
sapiens]
Length = 384
Score = 32.7 bits (73), Expect = 0.28
Identities = 45/179 (25%), Positives = 56/179 (31%), Gaps = 40/179 (22%)
Query: 9 HNTPEPPPFRKRAGLRLQPIRTREPRVSNLWGGCGRAGGGRGVVWEGPRPW--EARTCRV 66
H PP R +G + PR S ++G GPRP AR
Sbjct: 87 HPRTRSPPGRSGSGTTFSAV---PPRPSQ-----HQSGSRLRPAAPGPRPGCSSARASPA 138
Query: 67 RRGGEAAGVQRPRRGLCTLAAAES-GCPSASFTSRWARQGALPPTKTCPRCPSSPREGTV 125
+AA P R + S G S +R +R G PP TC RC ++PR
Sbjct: 139 PAAPQAAARTAPGRAASGGSGPGSRGQGSDQVGARPSRAGGQPPPLTCRRCRAAPR---- 194
Query: 126 TNNNSTQRRLGGEESFRPAAERSPPRLEEKGCRAGGCLPGAAVWGAEATRCAEWGAGRG 184
S RP P G G A C WG+G G
Sbjct: 195 -------------RSARPFRRPGLPLKSRPGS------------GTGARSCGTWGSGGG 228
>gi|239508962 PREDICTED: hypothetical protein [Homo sapiens]
Length = 384
Score = 32.7 bits (73), Expect = 0.28
Identities = 45/179 (25%), Positives = 56/179 (31%), Gaps = 40/179 (22%)
Query: 9 HNTPEPPPFRKRAGLRLQPIRTREPRVSNLWGGCGRAGGGRGVVWEGPRPW--EARTCRV 66
H PP R +G + PR S ++G GPRP AR
Sbjct: 87 HPRTRSPPGRSGSGTTFSAV---PPRPSQ-----HQSGSRLRPAAPGPRPGCSSARASPA 138
Query: 67 RRGGEAAGVQRPRRGLCTLAAAES-GCPSASFTSRWARQGALPPTKTCPRCPSSPREGTV 125
+AA P R + S G S +R +R G PP TC RC ++PR
Sbjct: 139 PAAPQAAARTAPGRAASGGSGPGSRGQGSDQVGARPSRAGGQPPPLTCRRCRAAPR---- 194
Query: 126 TNNNSTQRRLGGEESFRPAAERSPPRLEEKGCRAGGCLPGAAVWGAEATRCAEWGAGRG 184
S RP P G G A C WG+G G
Sbjct: 195 -------------RSARPFRRPGLPLKSRPGS------------GTGARSCGTWGSGGG 228
>gi|54873613 agrin [Homo sapiens]
Length = 2045
Score = 32.3 bits (72), Expect = 0.37
Identities = 33/114 (28%), Positives = 46/114 (40%), Gaps = 18/114 (15%)
Query: 85 LAAAESGCPSASFTSRWARQGALPPTKTCPRCP----SSPREGTVTNNNSTQR------- 133
+ A SG +A T+R LP + PR P +S T +T+R
Sbjct: 1257 ITGATSGAIAAGATARATTASRLPSSAVTPRAPHPSHTSQPVAKTTAAPTTRRPPTTAPS 1316
Query: 134 RLGGEESFRPAAERSPPR-LEEKGCRAGGCLPGAAVWGAEATRCAEWGAGRGAA 186
R+ G RP A + PP+ + + C GG A+ G C AGRG A
Sbjct: 1317 RVPGR---RPPAPQQPPKPCDSQPCFHGGTCQDWALGGGFTCSCP---AGRGGA 1364
>gi|7661690 coiled-coil domain containing 9 [Homo sapiens]
Length = 531
Score = 32.3 bits (72), Expect = 0.37
Identities = 63/238 (26%), Positives = 81/238 (34%), Gaps = 40/238 (16%)
Query: 16 PFRKRAGLRLQPIRTREPRVSNLWGGCGRAGGGRGVVWEGPRPWEARTCRVRRGGEAAGV 75
P R+ G P ++ R GG RAG GR R WE RGG A G
Sbjct: 76 PSRRSPGTPRPPGASKGGRTPPQQGG--RAGMGRA-----SRSWEGSPGEQPRGGGAGG- 127
Query: 76 QRPRRGLCTLAAAESGCPSASFTSRWARQGALPPTKTCPRC----------PSSPREGTV 125
R RRG + SG S + R +++ + + + REG +
Sbjct: 128 -RGRRGRGRGSPHLSGAGDTSISDRKSKEWEERRRQNIEKMNEEMEKIAEYERNQREGVL 186
Query: 126 TNN------NSTQRRLGG-EESFRPAAERSPPRLEEKGCRAGGCLPGAAVWGAEATRCAE 178
N + +RR G EES R E S G GG G E R
Sbjct: 187 EPNPVRNFLDDPRRRSGPLEESERDRREES----RRHGRNWGGPDFERVRCGLEHER--- 239
Query: 179 WGAGRGAAPPSLGVLLLLCFSRTLSRARSWETRPGCSRRSLCCRRRCSRQRTPRGGWK 236
GR A S G + L R S W+ R + R R R P G W+
Sbjct: 240 --QGRRAGLGSAGDMTLSMTGRERSEYLRWK-----QEREKIDQERLQRHRKPTGQWR 290
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.136 0.468
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,983,105
Number of Sequences: 37866
Number of extensions: 720903
Number of successful extensions: 2894
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 128
Number of HSP's that attempted gapping in prelim test: 2803
Number of HSP's gapped (non-prelim): 208
length of query: 238
length of database: 18,247,518
effective HSP length: 99
effective length of query: 139
effective length of database: 14,498,784
effective search space: 2015330976
effective search space used: 2015330976
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.