Guide to the Human Genome
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Name: FLJ31485 Sequence: fasta or formatted (233aa) NCBI GI: 239755952
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.2         19           2
 C cysteine            2.1          5           1
 D aspartate           3.9          9           1
 E glutamate           3.9          9           2
 F phenylalanine       2.1          5           1
 G glycine            11.6         27           3
 H histidine           1.3          3           1
 I isoleucine          1.7          4           1
 K lysine              3.9          9           4
 L leucine             8.6         20           2
 M methionine          1.7          4           1
 N asparagine          2.1          5           1
 P proline            12.0         28           4
 Q glutamine           2.6          6           1
 R arginine           10.7         25           3
 S serine             10.3         24           4
 T threonine           5.6         13           2
 V valine              3.9          9           3
 W tryptophan          2.1          5           1
 Y tyrosine            1.7          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
LOC644246             0.028   PREDICTED: hypothetical protein LOC644246 
WNK2                  0.028   WNK lysine deficient protein kinase 2 
LOC100128127          0.026   PREDICTED: hypothetical protein 
LOC100128127          0.026   PREDICTED: hypothetical protein 
WNK1                  0.024   WNK lysine deficient protein kinase 1 
LOC100128127          0.022   PREDICTED: hypothetical protein 
MYLK2                 0.022   skeletal myosin light chain kinase 
PDZD2                 0.022   PDZ domain containing 2 
CDAN1                 0.022   codanin 1 
BCL9                  0.022   B-cell CLL/lymphoma 9 
SRRM2                 0.019   splicing coactivator subunit SRm300 
LOC727918             0.017   PREDICTED: hypothetical protein 
LOC727918             0.017   PREDICTED: hypothetical protein 
LOC727918             0.017   PREDICTED: hypothetical protein 
PPP1R13L              0.017   protein phosphatase 1, regulatory subunit 13 like [...
PPP1R13L              0.017   protein phosphatase 1, regulatory subunit 13 like [H...
CASKIN1               0.017   CASK interacting protein 1 
LOC100292324          0.017   PREDICTED: hypothetical protein 
LOC100292054          0.017   PREDICTED: hypothetical protein XP_002345326 
LOC100291378          0.017   PREDICTED: hypothetical protein XP_002346429 
LOC100290779          0.017   PREDICTED: hypothetical protein XP_002346943 
LOC100287849          0.017   PREDICTED: hypothetical protein XP_002343395 
LOC100288041          0.017   PREDICTED: hypothetical protein XP_002342072 
LOC100294312          0.017   PREDICTED: hypothetical protein XP_002344082 
LOC100294220          0.017   PREDICTED: hypothetical protein 
LOC100294184          0.017   PREDICTED: hypothetical protein 
HNRNPA1L2             0.017   heterogeneous nuclear ribonucleoprotein A1-like [Hom...
HNRNPA1L2             0.017   heterogeneous nuclear ribonucleoprotein A1-like [Hom...
LOC100130883          0.017   PREDICTED: similar to proline rich 20 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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