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Search of human proteins with 239755943
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239755943 PREDICTED: hypothetical protein [Homo sapiens]
(107 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239755943 PREDICTED: hypothetical protein [Homo sapiens] 226 4e-60
gi|154800441 proline-rich protein HaeIII subfamily 1 [Homo sapiens] 40 4e-04
gi|158966674 proline-rich protein HaeIII subfamily 2 [Homo sapiens] 40 4e-04
gi|4826944 proline-rich protein HaeIII subfamily 2 [Homo sapiens] 40 4e-04
gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo ... 40 5e-04
gi|239749538 PREDICTED: hypothetical protein XP_002347080 [Homo ... 40 5e-04
gi|239743688 PREDICTED: hypothetical protein XP_002342946 [Homo ... 40 5e-04
gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo ... 40 5e-04
gi|239508962 PREDICTED: hypothetical protein [Homo sapiens] 40 5e-04
gi|239749199 PREDICTED: hypothetical protein XP_002346952 [Homo ... 39 0.001
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 37 0.003
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens] 37 0.004
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 37 0.004
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 37 0.004
gi|9966841 cell death regulator aven [Homo sapiens] 37 0.004
gi|71773208 alpha-2C-adrenergic receptor [Homo sapiens] 36 0.006
gi|239755698 PREDICTED: hypothetical protein [Homo sapiens] 36 0.006
gi|239750195 PREDICTED: hypothetical protein XP_002347307 [Homo ... 36 0.006
gi|239744500 PREDICTED: hypothetical protein XP_002343173 [Homo ... 36 0.006
gi|239744249 PREDICTED: similar to double homeobox, 4 [Homo sapi... 36 0.006
gi|239744248 PREDICTED: similar to double homeobox, 4 [Homo sapi... 36 0.006
gi|239744246 PREDICTED: hypothetical protein XP_002343082 [Homo ... 36 0.006
gi|239744244 PREDICTED: similar to double homeobox, 4 [Homo sapi... 36 0.006
gi|239744242 PREDICTED: similar to double homeobox, 4 [Homo sapi... 36 0.006
gi|239744240 PREDICTED: similar to double homeobox, 4 [Homo sapi... 36 0.006
gi|239742467 PREDICTED: double homeobox, 4-like [Homo sapiens] 36 0.006
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 36 0.006
gi|169173306 PREDICTED: hypothetical protein [Homo sapiens] 35 0.010
gi|169163728 PREDICTED: hypothetical protein [Homo sapiens] 35 0.010
gi|239750250 PREDICTED: hypothetical protein [Homo sapiens] 35 0.010
>gi|239755943 PREDICTED: hypothetical protein [Homo sapiens]
Length = 107
Score = 226 bits (575), Expect = 4e-60
Identities = 107/107 (100%), Positives = 107/107 (100%)
Query: 1 MPPRAPERAAAGGGKRRGRPQAGARWLSPQPGPARPPEEGGSGRLSGRGSVEGEKGQGKD 60
MPPRAPERAAAGGGKRRGRPQAGARWLSPQPGPARPPEEGGSGRLSGRGSVEGEKGQGKD
Sbjct: 1 MPPRAPERAAAGGGKRRGRPQAGARWLSPQPGPARPPEEGGSGRLSGRGSVEGEKGQGKD 60
Query: 61 LLSPRDPAPGQLLPGGVSLKDQRRLERRRRWRRQQRRPALPTSPPPS 107
LLSPRDPAPGQLLPGGVSLKDQRRLERRRRWRRQQRRPALPTSPPPS
Sbjct: 61 LLSPRDPAPGQLLPGGVSLKDQRRLERRRRWRRQQRRPALPTSPPPS 107
>gi|154800441 proline-rich protein HaeIII subfamily 1 [Homo sapiens]
Length = 166
Score = 40.0 bits (92), Expect = 4e-04
Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 14 GKRRGRPQAGARWLSPQPGPARPPEEGGSGRLSGRGSVEGEKGQGKDLLSPRDPAPGQ 71
GK +G PQ G PQ P PP++GG R RG +G QG P P PG+
Sbjct: 89 GKPQGPPQQGGHPPPPQGRPQGPPQQGGHPR-PPRGRPQGPPQQGGHQQGPPPPPPGK 145
Score = 28.9 bits (63), Expect = 0.93
Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 6/73 (8%)
Query: 2 PPRAPERAAAGGGKRRGRPQAGARWLSPQPGPARPPEEGGSGR---LSGRGSVEGEKGQG 58
PP+ G+ +G PQ G P+ P PP++GG + G +G QG
Sbjct: 94 PPQQGGHPPPPQGRPQGPPQQGGHPRPPRGRPQGPPQQGGHQQGPPPPPPGKPQGPPPQG 153
Query: 59 KDLLSPRDPAPGQ 71
P+ P GQ
Sbjct: 154 G---RPQGPPQGQ 163
>gi|158966674 proline-rich protein HaeIII subfamily 2 [Homo sapiens]
Length = 166
Score = 40.0 bits (92), Expect = 4e-04
Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 14 GKRRGRPQAGARWLSPQPGPARPPEEGGSGRLSGRGSVEGEKGQGKDLLSPRDPAPGQ 71
GK +G PQ G PQ P PP++GG R RG +G QG P P PG+
Sbjct: 89 GKPQGPPQQGGHPPPPQGRPQGPPQQGGHPR-PPRGRPQGPPQQGGHQQGPPPPPPGK 145
Score = 28.9 bits (63), Expect = 0.93
Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 6/73 (8%)
Query: 2 PPRAPERAAAGGGKRRGRPQAGARWLSPQPGPARPPEEGGSGR---LSGRGSVEGEKGQG 58
PP+ G+ +G PQ G P+ P PP++GG + G +G QG
Sbjct: 94 PPQQGGHPPPPQGRPQGPPQQGGHPRPPRGRPQGPPQQGGHQQGPPPPPPGKPQGPPPQG 153
Query: 59 KDLLSPRDPAPGQ 71
P+ P GQ
Sbjct: 154 G---RPQGPPQGQ 163
>gi|4826944 proline-rich protein HaeIII subfamily 2 [Homo sapiens]
Length = 166
Score = 40.0 bits (92), Expect = 4e-04
Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 14 GKRRGRPQAGARWLSPQPGPARPPEEGGSGRLSGRGSVEGEKGQGKDLLSPRDPAPGQ 71
GK +G PQ G PQ P PP++GG R RG +G QG P P PG+
Sbjct: 89 GKPQGPPQQGGHPPPPQGRPQGPPQQGGHPR-PPRGRPQGPPQQGGHQQGPPPPPPGK 145
Score = 28.9 bits (63), Expect = 0.93
Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 6/73 (8%)
Query: 2 PPRAPERAAAGGGKRRGRPQAGARWLSPQPGPARPPEEGGSGR---LSGRGSVEGEKGQG 58
PP+ G+ +G PQ G P+ P PP++GG + G +G QG
Sbjct: 94 PPQQGGHPPPPQGRPQGPPQQGGHPRPPRGRPQGPPQQGGHQQGPPPPPPGKPQGPPPQG 153
Query: 59 KDLLSPRDPAPGQ 71
P+ P GQ
Sbjct: 154 G---RPQGPPQGQ 163
>gi|239754657 PREDICTED: hypothetical protein XP_002346062 [Homo
sapiens]
Length = 384
Score = 39.7 bits (91), Expect = 5e-04
Identities = 34/110 (30%), Positives = 43/110 (39%), Gaps = 8/110 (7%)
Query: 1 MPPRAPERAAAGGGKRRG----RPQAGARWLSPQPGPARPPEEGGSGRLSGRGSVEGEKG 56
+PPR P + +G R RP + SP P + GR + GS G +G
Sbjct: 106 VPPR-PSQHQSGSRLRPAAPGPRPGCSSARASPAPAAPQAAARTAPGRAASGGSGPGSRG 164
Query: 57 QGKDLLSPRDPAPGQLLPGGVSLKDQRRLERRRRWRRQQRRPALPTSPPP 106
QG D + R G P L +R RR R RRP LP P
Sbjct: 165 QGSDQVGARPSRAGGQPP---PLTCRRCRAAPRRSARPFRRPGLPLKSRP 211
>gi|239749538 PREDICTED: hypothetical protein XP_002347080 [Homo
sapiens]
Length = 400
Score = 39.7 bits (91), Expect = 5e-04
Identities = 36/107 (33%), Positives = 43/107 (40%), Gaps = 7/107 (6%)
Query: 7 ERAAAGGGKRRGR------PQAGARWLSPQPGPARPPEEGGSGRLSGRGSVEGEKG-QGK 59
ER G G RGR P + R L P P P P GG G G+ S KG +G
Sbjct: 135 ERWLQGLGPPRGRGLSTAPPPSSLRLLPPTPRPFPPAPAGGKGEGGGKESAVLWKGAEGG 194
Query: 60 DLLSPRDPAPGQLLPGGVSLKDQRRLERRRRWRRQQRRPALPTSPPP 106
R+ A L + RRRR RPALP++P P
Sbjct: 195 GEKGNRNMAAAPLGDPAREAAQAQTGLRRRRPLELVPRPALPSAPSP 241
>gi|239743688 PREDICTED: hypothetical protein XP_002342946 [Homo
sapiens]
Length = 400
Score = 39.7 bits (91), Expect = 5e-04
Identities = 36/107 (33%), Positives = 43/107 (40%), Gaps = 7/107 (6%)
Query: 7 ERAAAGGGKRRGR------PQAGARWLSPQPGPARPPEEGGSGRLSGRGSVEGEKG-QGK 59
ER G G RGR P + R L P P P P GG G G+ S KG +G
Sbjct: 135 ERWLQGLGPPRGRGLSTAPPPSSLRLLPPTPRPFPPAPAGGKGEGGGKESAVLWKGAEGG 194
Query: 60 DLLSPRDPAPGQLLPGGVSLKDQRRLERRRRWRRQQRRPALPTSPPP 106
R+ A L + RRRR RPALP++P P
Sbjct: 195 GEKGNRNMAAAPLGDPAREAAQAQTGLRRRRPLELVPRPALPSAPSP 241
>gi|239743279 PREDICTED: hypothetical protein XP_002342816 [Homo
sapiens]
Length = 384
Score = 39.7 bits (91), Expect = 5e-04
Identities = 34/110 (30%), Positives = 43/110 (39%), Gaps = 8/110 (7%)
Query: 1 MPPRAPERAAAGGGKRRG----RPQAGARWLSPQPGPARPPEEGGSGRLSGRGSVEGEKG 56
+PPR P + +G R RP + SP P + GR + GS G +G
Sbjct: 106 VPPR-PSQHQSGSRLRPAAPGPRPGCSSARASPAPAAPQAAARTAPGRAASGGSGPGSRG 164
Query: 57 QGKDLLSPRDPAPGQLLPGGVSLKDQRRLERRRRWRRQQRRPALPTSPPP 106
QG D + R G P L +R RR R RRP LP P
Sbjct: 165 QGSDQVGARPSRAGGQPP---PLTCRRCRAAPRRSARPFRRPGLPLKSRP 211
>gi|239508962 PREDICTED: hypothetical protein [Homo sapiens]
Length = 384
Score = 39.7 bits (91), Expect = 5e-04
Identities = 34/110 (30%), Positives = 43/110 (39%), Gaps = 8/110 (7%)
Query: 1 MPPRAPERAAAGGGKRRG----RPQAGARWLSPQPGPARPPEEGGSGRLSGRGSVEGEKG 56
+PPR P + +G R RP + SP P + GR + GS G +G
Sbjct: 106 VPPR-PSQHQSGSRLRPAAPGPRPGCSSARASPAPAAPQAAARTAPGRAASGGSGPGSRG 164
Query: 57 QGKDLLSPRDPAPGQLLPGGVSLKDQRRLERRRRWRRQQRRPALPTSPPP 106
QG D + R G P L +R RR R RRP LP P
Sbjct: 165 QGSDQVGARPSRAGGQPP---PLTCRRCRAAPRRSARPFRRPGLPLKSRP 211
>gi|239749199 PREDICTED: hypothetical protein XP_002346952 [Homo
sapiens]
Length = 209
Score = 38.5 bits (88), Expect = 0.001
Identities = 33/105 (31%), Positives = 42/105 (40%), Gaps = 8/105 (7%)
Query: 1 MPPRAPERAAAGGGKRRG----RPQAGARWLSPQPGPARPPEEGGSGRLSGRGSVEGEKG 56
+PPR P + +G R RP + SP P + GR + GS G +G
Sbjct: 106 VPPR-PSQHQSGSRLRPAAPGPRPGCSSARASPAPAAPQAAARTAPGRAASGGSGPGSRG 164
Query: 57 QGKDLLSPRDPAPGQLLPGGVSLKDQRRLERRRRWRRQQRRPALP 101
QG D + R G P L +R RR R RRP LP
Sbjct: 165 QGSDQVGARPSRAGGQPP---PLTCRRCRAAPRRSARPFRRPGLP 206
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 37.0 bits (84), Expect = 0.003
Identities = 33/108 (30%), Positives = 45/108 (41%), Gaps = 15/108 (13%)
Query: 6 PERAAAGGGKRRGRPQAG---ARWLSPQPG-PARPPEEGGS---GRLSGRGSVEGEKGQG 58
P+R GK GRP G ++ P+PG P PP +GG+ G G EG+ QG
Sbjct: 47 PQRTPPPPGKPEGRPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGQPPQG 106
Query: 59 KDLLSPRDPAPGQLLPGGVSLKDQRRLERRRRWRRQQRRPALPTSPPP 106
+ P PG+ P G + + + RP P PPP
Sbjct: 107 GNQSQGPPPRPGK--PEGPPPQGGNQSQ------GPPPRPGKPEGPPP 146
>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
Length = 819
Score = 36.6 bits (83), Expect = 0.004
Identities = 28/100 (28%), Positives = 41/100 (41%), Gaps = 4/100 (4%)
Query: 4 RAPERAAAGGGKRRGRPQAGARWLSPQPGPARPPEEGGSGRLSGRGSVE----GEKGQGK 59
R + AA G KRRG AG + + G P GG GRG + G+K
Sbjct: 276 RQGQNAALAGAKRRGAATAGEKPAAKGRGGRGPKSLGGQNPRWGRGGKKPRRRGQKATKA 335
Query: 60 DLLSPRDPAPGQLLPGGVSLKDQRRLERRRRWRRQQRRPA 99
+ GQ V +K +++ RR + R+Q+ A
Sbjct: 336 AAAGTKRGGGGQQKAAVVGVKSRKKQRRRGKKPRRQKASA 375
Score = 30.0 bits (66), Expect = 0.42
Identities = 25/74 (33%), Positives = 31/74 (41%), Gaps = 17/74 (22%)
Query: 3 PRAPERAAAG----GG---------KRRGRPQAGARWLSP----QPGPARPPEEGGSGRL 45
PR + +AAG GG KRRG + RW +P Q PA P GGS +
Sbjct: 368 PRRQKASAAGAKSRGGGDKKGLREAKRRGDGRKKPRWQNPRRRAQKAPAAKPRGGGSKKP 427
Query: 46 SGRGSVEGEKGQGK 59
RG + GK
Sbjct: 428 RRRGPKAAKSRGGK 441
Score = 26.6 bits (57), Expect = 4.6
Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 9/51 (17%)
Query: 5 APERAAAGGGKRRGRPQAGARWLSPQPGPARPPEEGGSGRLSGRGSVEGEK 55
A E+A A G K RGR QP +P G R+ G S + +K
Sbjct: 509 AGEKATAAGAKSRGR---------KQPRRQKPAVAGAKSRVGGSKSRQRQK 550
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 36.6 bits (83), Expect = 0.004
Identities = 32/119 (26%), Positives = 40/119 (33%), Gaps = 12/119 (10%)
Query: 1 MPPRAPE--RAAAGGGKRRGRPQAGARWLSPQPGPARPPEEGGSGRLSGRGSVEGEKGQG 58
+PP P R RG P P PGP PP G G G GS+
Sbjct: 183 IPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSS 242
Query: 59 KDLLS---PRDPAPGQLL-------PGGVSLKDQRRLERRRRWRRQQRRPALPTSPPPS 107
S P P P + L P V + E Q +P +P++P PS
Sbjct: 243 SSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPS 301
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 36.6 bits (83), Expect = 0.004
Identities = 32/119 (26%), Positives = 40/119 (33%), Gaps = 12/119 (10%)
Query: 1 MPPRAPE--RAAAGGGKRRGRPQAGARWLSPQPGPARPPEEGGSGRLSGRGSVEGEKGQG 58
+PP P R RG P P PGP PP G G G GS+
Sbjct: 183 IPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSS 242
Query: 59 KDLLS---PRDPAPGQLL-------PGGVSLKDQRRLERRRRWRRQQRRPALPTSPPPS 107
S P P P + L P V + E Q +P +P++P PS
Sbjct: 243 SSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPS 301
>gi|9966841 cell death regulator aven [Homo sapiens]
Length = 362
Score = 36.6 bits (83), Expect = 0.004
Identities = 25/71 (35%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Query: 7 ERAAAGG-GKRRGRPQAGARWLSPQPGPARPPEEGGSGRLSGRGSVEGEKGQGKDLLSPR 65
ER A GG G+R GR + G S +PG A GG G G G +G+G+ R
Sbjct: 4 ERGARGGRGRRPGRGRPGGDRHSERPGAAAAVARGGGGGGGGDGGGRRGRGRGRGFRGAR 63
Query: 66 DPAPGQLLPGG 76
G P G
Sbjct: 64 GGRGGGGAPRG 74
>gi|71773208 alpha-2C-adrenergic receptor [Homo sapiens]
Length = 462
Score = 36.2 bits (82), Expect = 0.006
Identities = 30/84 (35%), Positives = 37/84 (44%), Gaps = 9/84 (10%)
Query: 9 AAAGGGKRRGRPQAGARWLSPQPGPARPPEEGGSGRLSGRGSVEGEKGQGKDLLSPRDPA 68
AAA +RRG + G R R EGG+G G+G+ G G L + R P
Sbjct: 290 AAAERRRRRGALRRGGR--------RRAGAEGGAGGADGQGAGPGAAESGA-LTASRSPG 340
Query: 69 PGQLLPGGVSLKDQRRLERRRRWR 92
PG L S + L RRRR R
Sbjct: 341 PGGRLSRASSRSVEFFLSRRRRAR 364
>gi|239755698 PREDICTED: hypothetical protein [Homo sapiens]
Length = 117
Score = 36.2 bits (82), Expect = 0.006
Identities = 32/84 (38%), Positives = 36/84 (42%), Gaps = 17/84 (20%)
Query: 1 MPPRAPERAAAGGGKRRGRPQAGARWLSPQPGPARPPEEGGSGRL--------SGRGSVE 52
MP P RA GG R P WLS QP P + PE GSGR G G+
Sbjct: 11 MPRLFPCRADWGG---RTEP-----WLSGQPSPGKEPEPDGSGRRRESGWARGGGSGTQS 62
Query: 53 GEKGQGKDLLSPRDPAPGQL-LPG 75
G G +P P+ G L LPG
Sbjct: 63 QAGGGGSGGGAPSFPSVGTLTLPG 86
>gi|239750195 PREDICTED: hypothetical protein XP_002347307 [Homo
sapiens]
Length = 117
Score = 36.2 bits (82), Expect = 0.006
Identities = 32/84 (38%), Positives = 36/84 (42%), Gaps = 17/84 (20%)
Query: 1 MPPRAPERAAAGGGKRRGRPQAGARWLSPQPGPARPPEEGGSGRL--------SGRGSVE 52
MP P RA GG R P WLS QP P + PE GSGR G G+
Sbjct: 11 MPRLFPCRADWGG---RTEP-----WLSGQPSPGKEPEPDGSGRRRESGWARGGGSGTQS 62
Query: 53 GEKGQGKDLLSPRDPAPGQL-LPG 75
G G +P P+ G L LPG
Sbjct: 63 QAGGGGSGGGAPSFPSVGTLTLPG 86
>gi|239744500 PREDICTED: hypothetical protein XP_002343173 [Homo
sapiens]
Length = 117
Score = 36.2 bits (82), Expect = 0.006
Identities = 32/84 (38%), Positives = 36/84 (42%), Gaps = 17/84 (20%)
Query: 1 MPPRAPERAAAGGGKRRGRPQAGARWLSPQPGPARPPEEGGSGRL--------SGRGSVE 52
MP P RA GG R P WLS QP P + PE GSGR G G+
Sbjct: 11 MPRLFPCRADWGG---RTEP-----WLSGQPSPGKEPEPDGSGRRRESGWARGGGSGTQS 62
Query: 53 GEKGQGKDLLSPRDPAPGQL-LPG 75
G G +P P+ G L LPG
Sbjct: 63 QAGGGGSGGGAPSFPSVGTLTLPG 86
>gi|239744249 PREDICTED: similar to double homeobox, 4 [Homo
sapiens]
Length = 483
Score = 36.2 bits (82), Expect = 0.006
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 8/92 (8%)
Query: 14 GKRRGRPQAGARWLSPQPGPARPPEEGGSGRLSGRGSVEGEKGQGKDLLSPRDPAPGQLL 73
G RG AGA W PQ G A PP+ + +G ++G + L ++PAP L
Sbjct: 372 GWGRGPQVAGAAW-EPQAGAAPPPQPAPPDASARQGQMQGIPAPSQAL---QEPAPWSAL 427
Query: 74 PGGVSLKDQRRLERRRRWRRQQRRPALPTSPP 105
P G+ L + QQ +P L T P
Sbjct: 428 PCGLLLDELLASPE----FLQQAQPLLETEAP 455
>gi|239744248 PREDICTED: similar to double homeobox, 4 [Homo
sapiens]
Length = 483
Score = 36.2 bits (82), Expect = 0.006
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 8/92 (8%)
Query: 14 GKRRGRPQAGARWLSPQPGPARPPEEGGSGRLSGRGSVEGEKGQGKDLLSPRDPAPGQLL 73
G RG AGA W PQ G A PP+ + +G ++G + L ++PAP L
Sbjct: 372 GWGRGPQVAGAAW-EPQAGAAPPPQPAPPDASARQGQMQGIPAPSQAL---QEPAPWSAL 427
Query: 74 PGGVSLKDQRRLERRRRWRRQQRRPALPTSPP 105
P G+ L + QQ +P L T P
Sbjct: 428 PCGLLLDELLASPE----FLQQAQPLLETEAP 455
>gi|239744246 PREDICTED: hypothetical protein XP_002343082 [Homo
sapiens]
Length = 483
Score = 36.2 bits (82), Expect = 0.006
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 8/92 (8%)
Query: 14 GKRRGRPQAGARWLSPQPGPARPPEEGGSGRLSGRGSVEGEKGQGKDLLSPRDPAPGQLL 73
G RG AGA W PQ G A PP+ + +G ++G + L ++PAP L
Sbjct: 372 GWGRGPQVAGAAW-EPQAGAAPPPQPAPPDASARQGQMQGIPAPSQAL---QEPAPWSAL 427
Query: 74 PGGVSLKDQRRLERRRRWRRQQRRPALPTSPP 105
P G+ L + QQ +P L T P
Sbjct: 428 PCGLLLDELLASPE----FLQQAQPLLETEAP 455
>gi|239744244 PREDICTED: similar to double homeobox, 4 [Homo
sapiens]
Length = 483
Score = 36.2 bits (82), Expect = 0.006
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 8/92 (8%)
Query: 14 GKRRGRPQAGARWLSPQPGPARPPEEGGSGRLSGRGSVEGEKGQGKDLLSPRDPAPGQLL 73
G RG AGA W PQ G A PP+ + +G ++G + L ++PAP L
Sbjct: 372 GWGRGPQVAGAAW-EPQAGAAPPPQPAPPDASARQGQMQGIPAPSQAL---QEPAPWSAL 427
Query: 74 PGGVSLKDQRRLERRRRWRRQQRRPALPTSPP 105
P G+ L + QQ +P L T P
Sbjct: 428 PCGLLLDELLASPE----FLQQAQPLLETEAP 455
>gi|239744242 PREDICTED: similar to double homeobox, 4 [Homo
sapiens]
Length = 483
Score = 36.2 bits (82), Expect = 0.006
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 8/92 (8%)
Query: 14 GKRRGRPQAGARWLSPQPGPARPPEEGGSGRLSGRGSVEGEKGQGKDLLSPRDPAPGQLL 73
G RG AGA W PQ G A PP+ + +G ++G + L ++PAP L
Sbjct: 372 GWGRGPQVAGAAW-EPQAGAAPPPQPAPPDASARQGQMQGIPAPSQAL---QEPAPWSAL 427
Query: 74 PGGVSLKDQRRLERRRRWRRQQRRPALPTSPP 105
P G+ L + QQ +P L T P
Sbjct: 428 PCGLLLDELLASPE----FLQQAQPLLETEAP 455
>gi|239744240 PREDICTED: similar to double homeobox, 4 [Homo
sapiens]
Length = 483
Score = 36.2 bits (82), Expect = 0.006
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 8/92 (8%)
Query: 14 GKRRGRPQAGARWLSPQPGPARPPEEGGSGRLSGRGSVEGEKGQGKDLLSPRDPAPGQLL 73
G RG AGA W PQ G A PP+ + +G ++G + L ++PAP L
Sbjct: 372 GWGRGPQVAGAAW-EPQAGAAPPPQPAPPDASARQGQMQGIPAPSQAL---QEPAPWSAL 427
Query: 74 PGGVSLKDQRRLERRRRWRRQQRRPALPTSPP 105
P G+ L + QQ +P L T P
Sbjct: 428 PCGLLLDELLASPE----FLQQAQPLLETEAP 455
>gi|239742467 PREDICTED: double homeobox, 4-like [Homo sapiens]
Length = 483
Score = 36.2 bits (82), Expect = 0.006
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 8/92 (8%)
Query: 14 GKRRGRPQAGARWLSPQPGPARPPEEGGSGRLSGRGSVEGEKGQGKDLLSPRDPAPGQLL 73
G RG AGA W PQ G A PP+ + +G ++G + L ++PAP L
Sbjct: 372 GWGRGPQVAGAAW-EPQAGEAPPPQPAPPDASARQGQMQGIPAPSQAL---QEPAPWSAL 427
Query: 74 PGGVSLKDQRRLERRRRWRRQQRRPALPTSPP 105
P G+ L + QQ +P L T P
Sbjct: 428 PCGLLLDELLASPE----FLQQAQPLLETEAP 455
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 36.2 bits (82), Expect = 0.006
Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Query: 28 SPQ-PGPARPPEEGGSGRLSGRGSVEGEKGQGKDLLSPRDPAPGQLLPGG-VSLKDQRRL 85
SP+ P PARPP S + RG G GQ P P + LPG V++ +++ L
Sbjct: 2710 SPEGPSPARPPRRRTSADVEIRGQGTGRPGQ------PPGPKVLRKLPGRLVTVVEEKEL 2763
Query: 86 ERRRRWRRQQRRPALP 101
RRRR +R +P
Sbjct: 2764 VRRRRQQRGAASTLVP 2779
Score = 28.9 bits (63), Expect = 0.93
Identities = 37/131 (28%), Positives = 47/131 (35%), Gaps = 39/131 (29%)
Query: 2 PPRAP-------ERAAAGGGKRRGRPQAGARWLSPQPGPA------RPPEEGGSGRLSGR 48
PP+ P E GGG P+ G L PA RPP++ S +GR
Sbjct: 2820 PPQQPFIARRHIELGVTGGGS----PENGDGALLAITPPAVKRRRGRPPKKNRSPADAGR 2875
Query: 49 GSVEGEKGQGKDLLSPRDPAPG-------------QLLPGGVSLKDQ---------RRLE 86
G E K + DP PG QL+PG L Q +E
Sbjct: 2876 GVDEAPSSTLKGKTNGADPVPGPETLIVADPVLEPQLIPGPQPLGPQPVHRPNPLLSPVE 2935
Query: 87 RRRRWRRQQRR 97
+RRR R + R
Sbjct: 2936 KRRRGRPPKAR 2946
>gi|169173306 PREDICTED: hypothetical protein [Homo sapiens]
Length = 281
Score = 35.4 bits (80), Expect = 0.010
Identities = 30/105 (28%), Positives = 42/105 (40%), Gaps = 5/105 (4%)
Query: 3 PRAPERAAAGGGKRRGRPQAGARWLSPQPGPARPPEEGGSGRLSGRGSVEGEKGQGKDLL 62
PRAP+ +A GGK G + G L G RP SG + G G
Sbjct: 148 PRAPKPSAGRGGKEGG--ERGTEMLRRLRGSPRPNRHPRSGPVPAHGVASAAAGPATLRA 205
Query: 63 SPRDPAPGQLLPGGVSLKDQRRLERRRRWRRQQRRPALPTSPPPS 107
P A + + +L +RR + RR+ R P++ S P S
Sbjct: 206 PPGRGASSETMWPTENLSSRRRAPPQ---RRRTRAPSIARSLPGS 247
>gi|169163728 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 35.4 bits (80), Expect = 0.010
Identities = 36/107 (33%), Positives = 42/107 (39%), Gaps = 7/107 (6%)
Query: 3 PRAPERAAAGGGKRRGRPQAGARWLSPQPGPARPPEEGG-SGRLSGRGSVEGEKGQGKDL 61
PR P R RR RP G R + P E+GG SGR RG G +
Sbjct: 111 PRRPRRPPPA--PRRPRPAPGRRKSLYEAAPLLTREKGGRSGRRGDRGGSGWSHGHTARV 168
Query: 62 LSPRDPAPG-QLLPGGVSLKDQRRLERRRRWRRQQRRPALPTSPPPS 107
D + G PG R E RR RRQ P+L S PP+
Sbjct: 169 GGTGDSSAGLTTFPGSSRGGFSGREEEPRRERRQ---PSLQRSTPPA 212
>gi|239750250 PREDICTED: hypothetical protein [Homo sapiens]
Length = 202
Score = 35.4 bits (80), Expect = 0.010
Identities = 26/78 (33%), Positives = 34/78 (43%), Gaps = 8/78 (10%)
Query: 20 PQAGARWLSPQPGPARPPEEGGSGRLSGRGSVEGEKGQGKDLLSPRDPAPGQLLPGGVSL 79
PQ + W +P+ G P +EGG R S R G GK APG+ GG +
Sbjct: 133 PQLRSHWQAPRQG--WPAQEGGGRRPSRREEAAALAGGGK------RTAPGRRGRGGRAA 184
Query: 80 KDQRRLERRRRWRRQQRR 97
Q RWRRQ+ +
Sbjct: 185 AGQGGDRHPDRWRRQRSK 202
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.137 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,271,328
Number of Sequences: 37866
Number of extensions: 505514
Number of successful extensions: 4250
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 223
Number of HSP's successfully gapped in prelim test: 555
Number of HSP's that attempted gapping in prelim test: 2922
Number of HSP's gapped (non-prelim): 1806
length of query: 107
length of database: 18,247,518
effective HSP length: 77
effective length of query: 30
effective length of database: 15,331,836
effective search space: 459955080
effective search space used: 459955080
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.