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Search of human proteins with 239755715
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239755715 PREDICTED: similar to hCG2002101 [Homo sapiens]
(201 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239755715 PREDICTED: similar to hCG2002101 [Homo sapiens] 436 e-123
gi|54860079 nadrin isoform 1 [Homo sapiens] 38 0.007
gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens] 35 0.043
gi|186928829 dermokine isoform 4 precursor [Homo sapiens] 35 0.043
gi|186928827 dermokine isoform 5 precursor [Homo sapiens] 35 0.043
gi|186928825 dermokine isoform 3 precursor [Homo sapiens] 35 0.043
gi|33504489 dermokine isoform 2 precursor [Homo sapiens] 35 0.043
gi|154146231 DMRT-like family A2 [Homo sapiens] 35 0.056
gi|55956904 mitogen-activated protein kinase kinase kinase 4 iso... 34 0.073
gi|7662010 zinc finger protein 516 [Homo sapiens] 34 0.073
gi|4504733 insulin receptor substrate 4 [Homo sapiens] 33 0.16
gi|57864582 hornerin [Homo sapiens] 33 0.16
gi|5031633 FERM, RhoGEF, and pleckstrin domain protein 1 isoform... 33 0.16
gi|115430223 galectin 3 [Homo sapiens] 33 0.16
gi|88853066 sperm associated antigen 8 isoform 1 [Homo sapiens] 33 0.16
gi|27502373 sperm associated antigen 8 isoform 2 [Homo sapiens] 33 0.16
gi|169169677 PREDICTED: hypothetical protein [Homo sapiens] 33 0.21
gi|116256356 alpha 4 type IV collagen precursor [Homo sapiens] 33 0.21
gi|45439359 triple functional domain (PTPRF interacting) [Homo s... 33 0.21
gi|167234419 thyroid hormone receptor associated protein 3 [Homo... 33 0.21
gi|239753721 PREDICTED: hypothetical protein [Homo sapiens] 32 0.28
gi|239748254 PREDICTED: hypothetical protein XP_002346600 [Homo ... 32 0.28
gi|239742155 PREDICTED: hypothetical protein XP_002342442 [Homo ... 32 0.28
gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens] 32 0.28
gi|154426272 hypothetical protein LOC54540 [Homo sapiens] 32 0.28
gi|48762934 alpha 2 type I collagen [Homo sapiens] 32 0.36
gi|47778921 alpha 1 type XIX collagen precursor [Homo sapiens] 32 0.36
gi|61966701 dorsal neural-tube nuclear protein [Homo sapiens] 32 0.36
gi|153285461 fibroblast growth factor 2 [Homo sapiens] 32 0.47
gi|11761629 fibrinogen, alpha polypeptide isoform alpha prepropr... 32 0.47
>gi|239755715 PREDICTED: similar to hCG2002101 [Homo sapiens]
Length = 201
Score = 436 bits (1122), Expect = e-123
Identities = 201/201 (100%), Positives = 201/201 (100%)
Query: 1 MQCSTTASATLPPAPRGWTHRPQSWPCPEEMLVVFLLIHSPVLHCWGQTRLHPRTHDFKR 60
MQCSTTASATLPPAPRGWTHRPQSWPCPEEMLVVFLLIHSPVLHCWGQTRLHPRTHDFKR
Sbjct: 1 MQCSTTASATLPPAPRGWTHRPQSWPCPEEMLVVFLLIHSPVLHCWGQTRLHPRTHDFKR 60
Query: 61 KKPLSSNLVTGKRSAWKPCLQPLLTPGRAALTAPLMCPRLKAEHSRIHAGRPGDWLPNSG 120
KKPLSSNLVTGKRSAWKPCLQPLLTPGRAALTAPLMCPRLKAEHSRIHAGRPGDWLPNSG
Sbjct: 61 KKPLSSNLVTGKRSAWKPCLQPLLTPGRAALTAPLMCPRLKAEHSRIHAGRPGDWLPNSG 120
Query: 121 QDLGGTQGDWGPAPQGFGSRSGTSPGNQHGSSGSHPPEAVSGSHPTPAGQSSDGSELPEV 180
QDLGGTQGDWGPAPQGFGSRSGTSPGNQHGSSGSHPPEAVSGSHPTPAGQSSDGSELPEV
Sbjct: 121 QDLGGTQGDWGPAPQGFGSRSGTSPGNQHGSSGSHPPEAVSGSHPTPAGQSSDGSELPEV 180
Query: 181 GARQGLCSTLRAQWSSRCSNT 201
GARQGLCSTLRAQWSSRCSNT
Sbjct: 181 GARQGLCSTLRAQWSSRCSNT 201
>gi|54860079 nadrin isoform 1 [Homo sapiens]
Length = 881
Score = 37.7 bits (86), Expect = 0.007
Identities = 33/106 (31%), Positives = 46/106 (43%), Gaps = 6/106 (5%)
Query: 70 TGKRSAWKPCLQPLLTPGRAALTAPLMCPRLKAEHSRIHAGRPGDWLPNSGQDL--GGTQ 127
T R P QP L P + P P + SR + G +P+S L G +
Sbjct: 513 TLNRKHISPAFQPPLPPTDGSTVVPAG-PEPPPQSSRAESSSGGGTVPSSAGILEQGPSP 571
Query: 128 GDWGPA-PQGFGSRSGTSPG--NQHGSSGSHPPEAVSGSHPTPAGQ 170
GD P P+ S + +PG N +SG + P+A +GSH GQ
Sbjct: 572 GDGSPPKPKDPVSAAVPAPGRNNSQIASGQNQPQAAAGSHQLSMGQ 617
>gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens]
Length = 2240
Score = 35.0 bits (79), Expect = 0.043
Identities = 22/55 (40%), Positives = 26/55 (47%), Gaps = 8/55 (14%)
Query: 123 LGGTQGDWGPAPQGFGSRSGTSPGNQHGSSGSHPP--EAVSGSHPT----PAGQS 171
L G +G GP P FG + G PG+ G G HP E G HP P GQ+
Sbjct: 1900 LKGPRG--GPPPSQFGGQRGPPPGHFVGPRGPHPSQFETARGPHPNQFEGPRGQA 1952
Score = 28.5 bits (62), Expect = 4.0
Identities = 18/65 (27%), Positives = 25/65 (38%), Gaps = 2/65 (3%)
Query: 104 HSRIHAGRPGDWLPNSGQDLGGTQGDWGPAPQGFGSRSGTSPGNQHGSSGSHPPEAVSGS 163
H G G P +++ G GP P FG++ G P G G PP
Sbjct: 1767 HGPNFPGPRGPAPPFPEENIASNDGPRGPPPARFGAQKGPIPSLFSGQHG--PPPYGDSR 1824
Query: 164 HPTPA 168
P+P+
Sbjct: 1825 GPSPS 1829
>gi|186928829 dermokine isoform 4 precursor [Homo sapiens]
Length = 386
Score = 35.0 bits (79), Expect = 0.043
Identities = 28/96 (29%), Positives = 38/96 (39%), Gaps = 6/96 (6%)
Query: 110 GRPGDWLPNSGQDLGGTQGDWGPAPQGFGSRSGTS-----PGNQHGSSGSHPPEAVSGSH 164
G G W + G + G+QG G QG GT PGN GS G +P A G
Sbjct: 137 GHNGAWETSGGHGIFGSQGGLGGQGQGNPGGLGTPWVHGYPGNSAGSFGMNPQGAPWGQG 196
Query: 165 PTPAGQSSDGSELPEVGARQGLCSTLRAQWSSRCSN 200
G + G+ A+ G S + + C+N
Sbjct: 197 GN-GGPPNFGTNTQGAVAQPGYGSVRASNQNEGCTN 231
Score = 30.8 bits (68), Expect = 0.81
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 110 GRPGDWLPNSGQDLGGTQGDWGPAPQGFGSRSGTSPGNQHGSSGSH 155
G G S + GG++GD G + +GS +G+S GN GS G +
Sbjct: 280 GSSGGSSGGSSGNSGGSRGDSG-SESSWGSSTGSSSGNHGGSGGGN 324
Score = 30.0 bits (66), Expect = 1.4
Identities = 27/79 (34%), Positives = 31/79 (39%), Gaps = 6/79 (7%)
Query: 127 QGDWGPAPQGFG---SRSGTSPGNQHGSSGS---HPPEAVSGSHPTPAGQSSDGSELPEV 180
+G P P G G S SG G+Q GSSGS S S + +G SS GS
Sbjct: 227 EGCTNPPPSGSGGGSSNSGGGSGSQSGSSGSGSNGDNNNGSSSGGSSSGSSSGGSSGGSS 286
Query: 181 GARQGLCSTLRAQWSSRCS 199
G G R S S
Sbjct: 287 GGSSGNSGGSRGDSGSESS 305
Score = 30.0 bits (66), Expect = 1.4
Identities = 20/67 (29%), Positives = 23/67 (34%)
Query: 119 SGQDLGGTQGDWGPAPQGFGSRSGTSPGNQHGSSGSHPPEAVSGSHPTPAGQSSDGSELP 178
SG G+ GD GS SG+S G G S GS +SS GS
Sbjct: 252 SGSSGSGSNGDNNNGSSSGGSSSGSSSGGSSGGSSGGSSGNSGGSRGDSGSESSWGSSTG 311
Query: 179 EVGARQG 185
G
Sbjct: 312 SSSGNHG 318
Score = 29.3 bits (64), Expect = 2.4
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Query: 117 PNSGQDLGGTQGDWGPAPQGFGSRSGTSPGNQHGSS--GSHPPEAVSGSHPTPAGQSSDG 174
P SG G + G Q S SG++ N +GSS GS + GS +G SS
Sbjct: 233 PPSGSGGGSSNSGGGSGSQSGSSGSGSNGDNNNGSSSGGSSSGSSSGGSSGGSSGGSSGN 292
Query: 175 S 175
S
Sbjct: 293 S 293
Score = 27.3 bits (59), Expect = 9.0
Identities = 20/72 (27%), Positives = 25/72 (34%), Gaps = 1/72 (1%)
Query: 118 NSGQDLGGTQGDWGPAPQGFGSRSGTSPGNQHG-SSGSHPPEAVSGSHPTPAGQSSDGSE 176
NSG G G G G + +S G+ G SSG + GS G D
Sbjct: 243 NSGGGSGSQSGSSGSGSNGDNNNGSSSGGSSSGSSSGGSSGGSSGGSSGNSGGSRGDSGS 302
Query: 177 LPEVGARQGLCS 188
G+ G S
Sbjct: 303 ESSWGSSTGSSS 314
>gi|186928827 dermokine isoform 5 precursor [Homo sapiens]
Length = 398
Score = 35.0 bits (79), Expect = 0.043
Identities = 28/96 (29%), Positives = 38/96 (39%), Gaps = 6/96 (6%)
Query: 110 GRPGDWLPNSGQDLGGTQGDWGPAPQGFGSRSGTS-----PGNQHGSSGSHPPEAVSGSH 164
G G W + G + G+QG G QG GT PGN GS G +P A G
Sbjct: 137 GHNGAWETSGGHGIFGSQGGLGGQGQGNPGGLGTPWVHGYPGNSAGSFGMNPQGAPWGQG 196
Query: 165 PTPAGQSSDGSELPEVGARQGLCSTLRAQWSSRCSN 200
G + G+ A+ G S + + C+N
Sbjct: 197 GN-GGPPNFGTNTQGAVAQPGYGSVRASNQNEGCTN 231
Score = 32.0 bits (71), Expect = 0.36
Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 9/85 (10%)
Query: 110 GRPGDWLPNSGQDLGGTQGDWGPAPQGFGSRSGTSPGNQHGSSG--SHPPEAVSGSHPTP 167
G G S + GG++GD G + +GS +G+S GN GS G H P P
Sbjct: 280 GSSGGSSGGSSGNSGGSRGDSG-SESSWGSSTGSSSGNHGGSGGGNGHKPGC-----EKP 333
Query: 168 AGQSSDGSELPEVGAR-QGLCSTLR 191
++ E G R QG+ S +R
Sbjct: 334 GNEARGSGESGIQGFRGQGVSSNMR 358
Score = 30.0 bits (66), Expect = 1.4
Identities = 27/79 (34%), Positives = 31/79 (39%), Gaps = 6/79 (7%)
Query: 127 QGDWGPAPQGFG---SRSGTSPGNQHGSSGS---HPPEAVSGSHPTPAGQSSDGSELPEV 180
+G P P G G S SG G+Q GSSGS S S + +G SS GS
Sbjct: 227 EGCTNPPPSGSGGGSSNSGGGSGSQSGSSGSGSNGDNNNGSSSGGSSSGSSSGGSSGGSS 286
Query: 181 GARQGLCSTLRAQWSSRCS 199
G G R S S
Sbjct: 287 GGSSGNSGGSRGDSGSESS 305
Score = 30.0 bits (66), Expect = 1.4
Identities = 20/67 (29%), Positives = 23/67 (34%)
Query: 119 SGQDLGGTQGDWGPAPQGFGSRSGTSPGNQHGSSGSHPPEAVSGSHPTPAGQSSDGSELP 178
SG G+ GD GS SG+S G G S GS +SS GS
Sbjct: 252 SGSSGSGSNGDNNNGSSSGGSSSGSSSGGSSGGSSGGSSGNSGGSRGDSGSESSWGSSTG 311
Query: 179 EVGARQG 185
G
Sbjct: 312 SSSGNHG 318
Score = 29.3 bits (64), Expect = 2.4
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Query: 117 PNSGQDLGGTQGDWGPAPQGFGSRSGTSPGNQHGSS--GSHPPEAVSGSHPTPAGQSSDG 174
P SG G + G Q S SG++ N +GSS GS + GS +G SS
Sbjct: 233 PPSGSGGGSSNSGGGSGSQSGSSGSGSNGDNNNGSSSGGSSSGSSSGGSSGGSSGGSSGN 292
Query: 175 S 175
S
Sbjct: 293 S 293
Score = 27.3 bits (59), Expect = 9.0
Identities = 20/72 (27%), Positives = 25/72 (34%), Gaps = 1/72 (1%)
Query: 118 NSGQDLGGTQGDWGPAPQGFGSRSGTSPGNQHG-SSGSHPPEAVSGSHPTPAGQSSDGSE 176
NSG G G G G + +S G+ G SSG + GS G D
Sbjct: 243 NSGGGSGSQSGSSGSGSNGDNNNGSSSGGSSSGSSSGGSSGGSSGGSSGNSGGSRGDSGS 302
Query: 177 LPEVGARQGLCS 188
G+ G S
Sbjct: 303 ESSWGSSTGSSS 314
>gi|186928825 dermokine isoform 3 precursor [Homo sapiens]
Length = 416
Score = 35.0 bits (79), Expect = 0.043
Identities = 28/96 (29%), Positives = 38/96 (39%), Gaps = 6/96 (6%)
Query: 110 GRPGDWLPNSGQDLGGTQGDWGPAPQGFGSRSGTS-----PGNQHGSSGSHPPEAVSGSH 164
G G W + G + G+QG G QG GT PGN GS G +P A G
Sbjct: 137 GHNGAWETSGGHGIFGSQGGLGGQGQGNPGGLGTPWVHGYPGNSAGSFGMNPQGAPWGQG 196
Query: 165 PTPAGQSSDGSELPEVGARQGLCSTLRAQWSSRCSN 200
G + G+ A+ G S + + C+N
Sbjct: 197 GN-GGPPNFGTNTQGAVAQPGYGSVRASNQNEGCTN 231
Score = 32.0 bits (71), Expect = 0.36
Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 9/85 (10%)
Query: 110 GRPGDWLPNSGQDLGGTQGDWGPAPQGFGSRSGTSPGNQHGSSG--SHPPEAVSGSHPTP 167
G G S + GG++GD G + +GS +G+S GN GS G H P P
Sbjct: 280 GSSGGSSGGSSGNSGGSRGDSG-SESSWGSSTGSSSGNHGGSGGGNGHKPGC-----EKP 333
Query: 168 AGQSSDGSELPEVGAR-QGLCSTLR 191
++ E G R QG+ S +R
Sbjct: 334 GNEARGSGESGIQGFRGQGVSSNMR 358
Score = 30.0 bits (66), Expect = 1.4
Identities = 27/79 (34%), Positives = 31/79 (39%), Gaps = 6/79 (7%)
Query: 127 QGDWGPAPQGFG---SRSGTSPGNQHGSSGS---HPPEAVSGSHPTPAGQSSDGSELPEV 180
+G P P G G S SG G+Q GSSGS S S + +G SS GS
Sbjct: 227 EGCTNPPPSGSGGGSSNSGGGSGSQSGSSGSGSNGDNNNGSSSGGSSSGSSSGGSSGGSS 286
Query: 181 GARQGLCSTLRAQWSSRCS 199
G G R S S
Sbjct: 287 GGSSGNSGGSRGDSGSESS 305
Score = 30.0 bits (66), Expect = 1.4
Identities = 20/67 (29%), Positives = 23/67 (34%)
Query: 119 SGQDLGGTQGDWGPAPQGFGSRSGTSPGNQHGSSGSHPPEAVSGSHPTPAGQSSDGSELP 178
SG G+ GD GS SG+S G G S GS +SS GS
Sbjct: 252 SGSSGSGSNGDNNNGSSSGGSSSGSSSGGSSGGSSGGSSGNSGGSRGDSGSESSWGSSTG 311
Query: 179 EVGARQG 185
G
Sbjct: 312 SSSGNHG 318
Score = 29.3 bits (64), Expect = 2.4
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Query: 117 PNSGQDLGGTQGDWGPAPQGFGSRSGTSPGNQHGSS--GSHPPEAVSGSHPTPAGQSSDG 174
P SG G + G Q S SG++ N +GSS GS + GS +G SS
Sbjct: 233 PPSGSGGGSSNSGGGSGSQSGSSGSGSNGDNNNGSSSGGSSSGSSSGGSSGGSSGGSSGN 292
Query: 175 S 175
S
Sbjct: 293 S 293
Score = 27.3 bits (59), Expect = 9.0
Identities = 20/72 (27%), Positives = 25/72 (34%), Gaps = 1/72 (1%)
Query: 118 NSGQDLGGTQGDWGPAPQGFGSRSGTSPGNQHG-SSGSHPPEAVSGSHPTPAGQSSDGSE 176
NSG G G G G + +S G+ G SSG + GS G D
Sbjct: 243 NSGGGSGSQSGSSGSGSNGDNNNGSSSGGSSSGSSSGGSSGGSSGGSSGNSGGSRGDSGS 302
Query: 177 LPEVGARQGLCS 188
G+ G S
Sbjct: 303 ESSWGSSTGSSS 314
>gi|33504489 dermokine isoform 2 precursor [Homo sapiens]
Length = 476
Score = 35.0 bits (79), Expect = 0.043
Identities = 28/96 (29%), Positives = 38/96 (39%), Gaps = 6/96 (6%)
Query: 110 GRPGDWLPNSGQDLGGTQGDWGPAPQGFGSRSGTS-----PGNQHGSSGSHPPEAVSGSH 164
G G W + G + G+QG G QG GT PGN GS G +P A G
Sbjct: 137 GHNGAWETSGGHGIFGSQGGLGGQGQGNPGGLGTPWVHGYPGNSAGSFGMNPQGAPWGQG 196
Query: 165 PTPAGQSSDGSELPEVGARQGLCSTLRAQWSSRCSN 200
G + G+ A+ G S + + C+N
Sbjct: 197 GN-GGPPNFGTNTQGAVAQPGYGSVRASNQNEGCTN 231
Score = 30.8 bits (68), Expect = 0.81
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 110 GRPGDWLPNSGQDLGGTQGDWGPAPQGFGSRSGTSPGNQHGSSGSH 155
G G S + GG++GD G + +GS +G+S GN GS G +
Sbjct: 280 GSSGGSSGGSSGNSGGSRGDSG-SESSWGSSTGSSSGNHGGSGGGN 324
Score = 30.0 bits (66), Expect = 1.4
Identities = 27/79 (34%), Positives = 31/79 (39%), Gaps = 6/79 (7%)
Query: 127 QGDWGPAPQGFG---SRSGTSPGNQHGSSGS---HPPEAVSGSHPTPAGQSSDGSELPEV 180
+G P P G G S SG G+Q GSSGS S S + +G SS GS
Sbjct: 227 EGCTNPPPSGSGGGSSNSGGGSGSQSGSSGSGSNGDNNNGSSSGGSSSGSSSGGSSGGSS 286
Query: 181 GARQGLCSTLRAQWSSRCS 199
G G R S S
Sbjct: 287 GGSSGNSGGSRGDSGSESS 305
Score = 30.0 bits (66), Expect = 1.4
Identities = 20/67 (29%), Positives = 23/67 (34%)
Query: 119 SGQDLGGTQGDWGPAPQGFGSRSGTSPGNQHGSSGSHPPEAVSGSHPTPAGQSSDGSELP 178
SG G+ GD GS SG+S G G S GS +SS GS
Sbjct: 252 SGSSGSGSNGDNNNGSSSGGSSSGSSSGGSSGGSSGGSSGNSGGSRGDSGSESSWGSSTG 311
Query: 179 EVGARQG 185
G
Sbjct: 312 SSSGNHG 318
Score = 29.3 bits (64), Expect = 2.4
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Query: 117 PNSGQDLGGTQGDWGPAPQGFGSRSGTSPGNQHGSS--GSHPPEAVSGSHPTPAGQSSDG 174
P SG G + G Q S SG++ N +GSS GS + GS +G SS
Sbjct: 233 PPSGSGGGSSNSGGGSGSQSGSSGSGSNGDNNNGSSSGGSSSGSSSGGSSGGSSGGSSGN 292
Query: 175 S 175
S
Sbjct: 293 S 293
Score = 27.3 bits (59), Expect = 9.0
Identities = 20/72 (27%), Positives = 25/72 (34%), Gaps = 1/72 (1%)
Query: 118 NSGQDLGGTQGDWGPAPQGFGSRSGTSPGNQHG-SSGSHPPEAVSGSHPTPAGQSSDGSE 176
NSG G G G G + +S G+ G SSG + GS G D
Sbjct: 243 NSGGGSGSQSGSSGSGSNGDNNNGSSSGGSSSGSSSGGSSGGSSGGSSGNSGGSRGDSGS 302
Query: 177 LPEVGARQGLCS 188
G+ G S
Sbjct: 303 ESSWGSSTGSSS 314
>gi|154146231 DMRT-like family A2 [Homo sapiens]
Length = 542
Score = 34.7 bits (78), Expect = 0.056
Identities = 26/75 (34%), Positives = 29/75 (38%), Gaps = 5/75 (6%)
Query: 107 IHAGRPGDWLPNSGQDLGGTQGDWGPAPQGFGSRSGTSPGNQHGSSGSHPPEA-----VS 161
+ AGRPG LP + L D GP R G+ N G S S P A
Sbjct: 201 LQAGRPGSPLPPPVKPLSPDGADSGPGTSSPEVRPGSGSENGDGESFSGSPLARASKEAG 260
Query: 162 GSHPTPAGQSSDGSE 176
GS P AG G E
Sbjct: 261 GSCPGSAGPGGGGEE 275
>gi|55956904 mitogen-activated protein kinase kinase kinase 4 isoform
a [Homo sapiens]
Length = 1608
Score = 34.3 bits (77), Expect = 0.073
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 15/84 (17%)
Query: 132 PAPQGFGSRSGTSPGNQHGS---SGSHPPEAVSGSHPTPAGQSS------------DGSE 176
P P+GF +RS S HGS + + AV+ S P+P+G S GS
Sbjct: 1169 PTPEGFSTRSMPSDARSHGSPAAAAAAAAAAVAASRPSPSGGDSVLPKSISSAHDTRGSS 1228
Query: 177 LPEVGARQGLCSTLRAQWSSRCSN 200
+PE + + L+ + SR S+
Sbjct: 1229 VPENDRLASIAAELQFRSLSRHSS 1252
>gi|7662010 zinc finger protein 516 [Homo sapiens]
Length = 1163
Score = 34.3 bits (77), Expect = 0.073
Identities = 40/141 (28%), Positives = 49/141 (34%), Gaps = 18/141 (12%)
Query: 62 KPLSSNLVTGKRSA---------WKPCLQPLLTPGRAALTAPLMCPRLKAEHSRIHAGRP 112
K + SNLV RS K C QPLL P P K+ S +
Sbjct: 801 KSIRSNLVFLSRSGRTGPPPALGGKEC-QPLLLARFTRTQVPGGMPGSKSGSSPLGVVTK 859
Query: 113 GDWLP-NSGQDLGGTQGDWGPAPQGFGSRSGTSPGNQHGSSGSHP---PEAVSGSHPTPA 168
+P N GG W P P G+ HG++ P P + S P PA
Sbjct: 860 AASMPKNKESHSGGPCALWAPGPDGYRQTKPCHGQEPHGAATQGPLAKPRQEASSKPVPA 919
Query: 169 ----GQSSDGSELPEVGARQG 185
G S + P V AR G
Sbjct: 920 PGGGGFSRSATPTPTVIARAG 940
>gi|4504733 insulin receptor substrate 4 [Homo sapiens]
Length = 1257
Score = 33.1 bits (74), Expect = 0.16
Identities = 35/121 (28%), Positives = 50/121 (41%), Gaps = 11/121 (9%)
Query: 80 LQPLLTPGRAALTAPLMCPRLKAEHSRIHAGRPGD-WLPNSGQDLGGTQGDWGPAPQGFG 138
L P R AP RL +E S +G G+ P +D G+ GD+ P +G
Sbjct: 436 LAPSPARPRHPAEAPNNGARLSSEVSGSGSGNFGEEGNPQGKEDQEGSGGDYMPM-NNWG 494
Query: 139 SRSGTSPGNQHGSSGSHPPEAVSGSHPTPAGQSSDGSELPEVGARQGLCSTLRAQWSSRC 198
S +G G GS+G S SH + Q S + G+R G S + ++C
Sbjct: 495 SGNGRGSGGGQGSNGQG-----SSSHSSGGNQCSGEGQ----GSRGGQGSNGQGSGGNQC 545
Query: 199 S 199
S
Sbjct: 546 S 546
Score = 33.1 bits (74), Expect = 0.16
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 5/61 (8%)
Query: 118 NSGQDLGGTQ--GDWGPAPQGFGSRSGTSPGNQHGSSGSHPPEAVSGSHPTPAGQSSDGS 175
++GQ GG Q D G GS G PG HGS G P H + G++S G
Sbjct: 535 SNGQGSGGNQCSRDGQGTAGGHGSGGGQRPGGGHGSGGGQGP---GDGHGSGGGKNSGGG 591
Query: 176 E 176
+
Sbjct: 592 K 592
Score = 32.7 bits (73), Expect = 0.21
Identities = 22/67 (32%), Positives = 28/67 (41%), Gaps = 5/67 (7%)
Query: 110 GRPGDWLPNSGQDLGGTQGDWGPAPQG--FGSRSGTSPGNQHGSSGSHPPEAVSGSHPTP 167
G G+ GQ G G G G GS G PG+ HGS G + G +
Sbjct: 539 GSGGNQCSRDGQGTAGGHGSGGGQRPGGGHGSGGGQGPGDGHGSGGG---KNSGGGKGSG 595
Query: 168 AGQSSDG 174
+G+ SDG
Sbjct: 596 SGKGSDG 602
Score = 27.7 bits (60), Expect = 6.9
Identities = 25/86 (29%), Positives = 34/86 (39%), Gaps = 22/86 (25%)
Query: 110 GRPGDWLP------NSGQDLGGTQGDWGP------------APQGFGSRSGTSPGNQHGS 151
G GD++P +G+ GG QG G + +G GSR G N GS
Sbjct: 482 GSGGDYMPMNNWGSGNGRGSGGGQGSNGQGSSSHSSGGNQCSGEGQGSRGGQG-SNGQGS 540
Query: 152 SG---SHPPEAVSGSHPTPAGQSSDG 174
G S + +G H + GQ G
Sbjct: 541 GGNQCSRDGQGTAGGHGSGGGQRPGG 566
>gi|57864582 hornerin [Homo sapiens]
Length = 2850
Score = 33.1 bits (74), Expect = 0.16
Identities = 28/94 (29%), Positives = 37/94 (39%), Gaps = 27/94 (28%)
Query: 104 HSRIHAGRPGDWLPNSGQDLGGTQGDWGPAPQGFGS------------------------ 139
HSR +G P+ G+ G++ P G+GS
Sbjct: 530 HSRHGSGSGQSPSPSRGRHESGSRQSSSYGPHGYGSGRSSSRGPYESGSGHSSGLGHQES 589
Query: 140 RSGTSPG-NQHGSSGSHPPEAVSGSHPTPAGQSS 172
RSG S G QHGSS H + G H + +GQSS
Sbjct: 590 RSGQSSGYGQHGSSSGH--SSTHGQHGSTSGQSS 621
Score = 32.3 bits (72), Expect = 0.28
Identities = 23/66 (34%), Positives = 28/66 (42%), Gaps = 4/66 (6%)
Query: 108 HAGRPGDWLPNSGQDLGGTQGDWGPAPQ-GFGSRSGTSPGNQHGSSGSHPPEAVSGSHPT 166
H R G + G+ G + G Q G GSR G QHGS P G H +
Sbjct: 1900 HGSRSGQ--SSRGEQHGSSSGSSSSYGQHGSGSRQSLGHG-QHGSGSGQSPSPSRGRHGS 1956
Query: 167 PAGQSS 172
+GQSS
Sbjct: 1957 GSGQSS 1962
Score = 32.0 bits (71), Expect = 0.36
Identities = 24/69 (34%), Positives = 29/69 (42%), Gaps = 4/69 (5%)
Query: 108 HAGRPGDWLPNSGQDLGGTQGDWGPAPQ-GFGSRSGTSPGNQHGSSGSHPPEAVSGSHPT 166
H R G + G+ G + G Q G GSR G QHGS P G H +
Sbjct: 1430 HGSRSGQ--SSRGERHGSSSGSSSSYGQHGSGSRQSLGHG-QHGSGSGQSPSPSRGRHGS 1486
Query: 167 PAGQSSDGS 175
+GQSS S
Sbjct: 1487 GSGQSSSYS 1495
Score = 32.0 bits (71), Expect = 0.36
Identities = 24/69 (34%), Positives = 29/69 (42%), Gaps = 4/69 (5%)
Query: 108 HAGRPGDWLPNSGQDLGGTQGDWGPAPQ-GFGSRSGTSPGNQHGSSGSHPPEAVSGSHPT 166
H R G + G+ G + G Q G GSR G QHGS P G H +
Sbjct: 2370 HGSRSGQ--SSRGERHGSSSGSSSSYGQHGSGSRQSLGHG-QHGSGSGQSPSPSRGRHGS 2426
Query: 167 PAGQSSDGS 175
+GQSS S
Sbjct: 2427 GSGQSSSYS 2435
Score = 30.4 bits (67), Expect = 1.1
Identities = 26/68 (38%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Query: 120 GQDLGGTQGDWGPAPQGFGSRSGTSPGNQHGSSGSHPPEAVS-GSHPTPAGQ-SSDGSEL 177
GQ G+ G QG GS G SPG HG GS ++ S G H + +G+ SS G
Sbjct: 2043 GQHGSGSSQSSGYGRQGSGS--GQSPG--HGQRGSGSRQSPSYGRHGSGSGRSSSSGQHG 2098
Query: 178 PEVGARQG 185
P +G G
Sbjct: 2099 PGLGESSG 2106
Score = 30.0 bits (66), Expect = 1.4
Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Query: 125 GTQGDWGPAPQGFGSRSGTSPGNQHGSSGSHPPEAVSGSHPTPAGQSS 172
G+ +G G GSR G QHGS P G H + +GQSS
Sbjct: 978 GSSSSYGQ--HGSGSRQSLGHG-QHGSGSGQSPSPSRGRHGSGSGQSS 1022
Score = 29.6 bits (65), Expect = 1.8
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 8/68 (11%)
Query: 125 GTQGDWGPAPQGFGSRSG---TSPGNQHGSSGSHPPEAVSGSHPTPAGQSSDGSELPEVG 181
G G GFG +SG +S +QHGS SH S + +S S + G
Sbjct: 689 GPHGSVSGQSSGFGHKSGSGQSSGYSQHGSGSSH-----SSGYRKHGSRSGQSSRSEQHG 743
Query: 182 ARQGLCST 189
+ GL S+
Sbjct: 744 SSSGLSSS 751
Score = 28.9 bits (63), Expect = 3.1
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 120 GQDLGGTQGDWGPAPQGFGSRSGTSPGNQHGSSGSHPPEAVS-GSHPTPAGQSSDGSE 176
GQ G+ G QG GS G SPG HG GS ++ S G H + +G+SS +
Sbjct: 1103 GQHGSGSSQSSGYGRQGSGS--GQSPG--HGQRGSGSRQSPSYGRHGSGSGRSSSSGQ 1156
Score = 28.9 bits (63), Expect = 3.1
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 120 GQDLGGTQGDWGPAPQGFGSRSGTSPGNQHGSSGSHPPEAVS-GSHPTPAGQSSDGSE 176
GQ G+ G QG GS G SPG HG GS ++ S G H + +G+SS +
Sbjct: 1573 GQHGSGSSQSSGYGRQGSGS--GQSPG--HGQRGSGSRQSPSYGRHGSGSGRSSSSGQ 1626
Score = 28.9 bits (63), Expect = 3.1
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 120 GQDLGGTQGDWGPAPQGFGSRSGTSPGNQHGSSGSHPPEAVS-GSHPTPAGQSSDGSE 176
GQ G+ G QG GS G SPG HG GS ++ S G H + +G+SS +
Sbjct: 2513 GQHGSGSSQSSGYGRQGSGS--GQSPG--HGQRGSGSRQSPSYGRHGSGSGRSSSSGQ 2566
Score = 28.9 bits (63), Expect = 3.1
Identities = 23/72 (31%), Positives = 28/72 (38%), Gaps = 6/72 (8%)
Query: 108 HAGRPGDWLPNSGQDLGGTQGDWGPAPQ-GFGSRSGTSPGNQHGSSGSHPPEAVSGS--- 163
H R G + G+ G + G Q G GSR + G Q SG P GS
Sbjct: 2606 HGSRSGQ--SSRGERHGSSSGSSSHYGQHGSGSRQSSGHGRQGSGSGQSPSRGRHGSGLG 2663
Query: 164 HPTPAGQSSDGS 175
H + GQ GS
Sbjct: 2664 HSSSHGQHGSGS 2675
Score = 28.5 bits (62), Expect = 4.0
Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 3/68 (4%)
Query: 119 SGQDLGGTQGDWGPAPQGFGSRSGTSPG-NQHGSSGSHPPEAVSGSHPTPAGQSSDGSEL 177
SG+ G+ P GS SG SP +HGS + SG H + +GQSS
Sbjct: 878 SGRGRHGSGSGQSPGHGQRGSGSGQSPSYGRHGSGSGR--SSSSGRHGSGSGQSSGFGHK 935
Query: 178 PEVGARQG 185
G G
Sbjct: 936 SSSGQSSG 943
Score = 28.5 bits (62), Expect = 4.0
Identities = 23/72 (31%), Positives = 28/72 (38%), Gaps = 6/72 (8%)
Query: 108 HAGRPGDWLPNSGQDLGGTQGDWGPAPQ-GFGSRSGTSPGNQHGSSGSHPPEAVSGS--- 163
H R G + G+ G + G Q G GSR + G Q SG P GS
Sbjct: 1196 HGSRSGQ--SSRGERHGSSSGSSSHYGQHGSGSRQSSGHGRQGSGSGHSPSRGRHGSGLG 1253
Query: 164 HPTPAGQSSDGS 175
H + GQ GS
Sbjct: 1254 HSSSHGQHGSGS 1265
Score = 28.5 bits (62), Expect = 4.0
Identities = 23/72 (31%), Positives = 28/72 (38%), Gaps = 6/72 (8%)
Query: 108 HAGRPGDWLPNSGQDLGGTQGDWGPAPQ-GFGSRSGTSPGNQHGSSGSHPPEAVSGS--- 163
H R G + G+ G + G Q G GSR + G Q SG P GS
Sbjct: 2136 HGSRSGQ--SSRGERHGSSSGSSSRYGQHGSGSRQSSGHGRQGSGSGHSPSRGRHGSGSG 2193
Query: 164 HPTPAGQSSDGS 175
H + GQ GS
Sbjct: 2194 HSSSHGQHGSGS 2205
Score = 28.1 bits (61), Expect = 5.2
Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 8/118 (6%)
Query: 66 SNLVTGKRSAWKPCLQPLLTPGRAALTAPLMCPR-LKAEH------SRIHAGRPGDWLPN 118
S+ G+ ++ ++ L PG +++ L R +H S + + D +
Sbjct: 130 SSWSAGENDSYSRNVRGSLKPGTESISRRLSFQRDFSGQHNSYSGQSSSYGEQNSDSHQS 189
Query: 119 SGQDLGGTQGDWGPAPQGFGSRSGTSPGNQHGSSGSHPPEAVSGSHPTPAGQSSDGSE 176
SG+ G+ P GS SG S N SGS S H + +GQSS S+
Sbjct: 190 SGRGQCGSGSGQSPNYGQHGSGSGQSSSNDTHGSGSGQSSGFS-QHKSSSGQSSGYSQ 246
Score = 27.3 bits (59), Expect = 9.0
Identities = 16/43 (37%), Positives = 18/43 (41%), Gaps = 3/43 (6%)
Query: 136 GFGSRSGTSPGNQHGSSGSHPPEAVSGS---HPTPAGQSSDGS 175
G GSR + G Q SG P GS H + GQ GS
Sbjct: 1693 GSGSRQSSGHGRQGSGSGQSPSRGRHGSGLGHSSSHGQHGSGS 1735
>gi|5031633 FERM, RhoGEF, and pleckstrin domain protein 1 isoform 1
[Homo sapiens]
Length = 1045
Score = 33.1 bits (74), Expect = 0.16
Identities = 27/87 (31%), Positives = 38/87 (43%), Gaps = 13/87 (14%)
Query: 99 RLKAEHSRIHAGRP---------GDWLPNSGQDLGGTQGDWGPAPQGFGSRSGTSPGNQH 149
+ + +HS+IH+ R + L S Q T G+ +P G R G P
Sbjct: 360 QFERKHSKIHSIRSLASQPTELNSEVLEQSQQSTSLTFGEGAESPGGQSCRRGKEPKVSA 419
Query: 150 GSSGSHPPEAVSGSHPTPAG-QSSDGS 175
G GSHP A S PAG + +DG+
Sbjct: 420 GEPGSHPSPAPRRS---PAGNKQADGA 443
>gi|115430223 galectin 3 [Homo sapiens]
Length = 250
Score = 33.1 bits (74), Expect = 0.16
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 7/71 (9%)
Query: 102 AEHSRIHAGRPGDWLPNSGQDLGGTQGDWGPAPQGFGSRSGTS-PGNQHGSS--GSHPPE 158
A++ +H G PN G G WG P G G G S PG G + G++P +
Sbjct: 2 ADNFSLHDALSGSGNPNPQ----GWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPGQ 57
Query: 159 AVSGSHPTPAG 169
A G++P G
Sbjct: 58 APPGAYPGAPG 68
Score = 29.3 bits (64), Expect = 2.4
Identities = 20/60 (33%), Positives = 24/60 (40%), Gaps = 2/60 (3%)
Query: 128 GDWGPAPQGFGSRSGTSPGNQHGSSGSHPPEAVSGSHPTPA--GQSSDGSELPEVGARQG 185
G P PQG+ G P G G+ P A G P A GQ+ G+ GA G
Sbjct: 13 GSGNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAPGAYPG 72
>gi|88853066 sperm associated antigen 8 isoform 1 [Homo sapiens]
Length = 485
Score = 33.1 bits (74), Expect = 0.16
Identities = 27/69 (39%), Positives = 29/69 (42%), Gaps = 11/69 (15%)
Query: 108 HAGRPGDWLPNSGQDLGGTQGDWGPAPQGFGSRSGTSPGNQHGSS-----GSHP---PEA 159
H+ PG P G G G A G GS SG G+ GS GS P P
Sbjct: 131 HSSNPG---PVPGSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGH 187
Query: 160 VSGSHPTPA 168
SGSHP PA
Sbjct: 188 GSGSHPGPA 196
>gi|27502373 sperm associated antigen 8 isoform 2 [Homo sapiens]
Length = 501
Score = 33.1 bits (74), Expect = 0.16
Identities = 27/69 (39%), Positives = 29/69 (42%), Gaps = 11/69 (15%)
Query: 108 HAGRPGDWLPNSGQDLGGTQGDWGPAPQGFGSRSGTSPGNQHGSS-----GSHP---PEA 159
H+ PG P G G G A G GS SG G+ GS GS P P
Sbjct: 131 HSSNPG---PVPGSSSGPVLGSSSGAGHGSGSGSGPGCGSVPGSGSGPGPGSGPGSGPGH 187
Query: 160 VSGSHPTPA 168
SGSHP PA
Sbjct: 188 GSGSHPGPA 196
>gi|169169677 PREDICTED: hypothetical protein [Homo sapiens]
Length = 167
Score = 32.7 bits (73), Expect = 0.21
Identities = 42/150 (28%), Positives = 54/150 (36%), Gaps = 17/150 (11%)
Query: 62 KPLSSNLVTGK--RSAWKPCLQPLLTP--GRAALTAPLMCPRLKAEHSRIHAGRPG---D 114
KP+ + L G+ SA P P + GR + P PR A + PG
Sbjct: 4 KPVGAKLRPGRPPSSAHLPSALPAVATLGGRLGVRVPF-APRPPASDPLLPPAFPGWGER 62
Query: 115 WLPNSGQDLGGTQGDWGPAPQGFGSRSGTSPGNQHG-----SSGSHPPEAVSGSHPTPAG 169
WL + LG G GP + +PG G G H P+A G PA
Sbjct: 63 WLGRA-HTLGRVGGAAGPTQEAPAGPEEVTPGTARGRVRAEGYGRHQPKAPGGRQAAPAM 121
Query: 170 QSSDGSELP---EVGARQGLCSTLRAQWSS 196
S+ L G R G + RA SS
Sbjct: 122 PSNRDQRLAGCGRAGKRPGGPNPARAGLSS 151
>gi|116256356 alpha 4 type IV collagen precursor [Homo sapiens]
Length = 1690
Score = 32.7 bits (73), Expect = 0.21
Identities = 28/85 (32%), Positives = 32/85 (37%), Gaps = 8/85 (9%)
Query: 86 PGRAALTAPLMCPRLKAEHSRIHAGRPGDWLPNSGQDLG--GTQGDWGPAPQGFGSRSGT 143
PG P P L H GRPG P + + G G +GD G GFG G+
Sbjct: 685 PGPKGFPGPQGAPGLSGSDG--HKGRPGT--PGTAEIPGPPGFRGDMGDP--GFGGEKGS 738
Query: 144 SPGNQHGSSGSHPPEAVSGSHPTPA 168
SP G GS G PA
Sbjct: 739 SPVGPPGPPGSPGVNGQKGIPGDPA 763
>gi|45439359 triple functional domain (PTPRF interacting) [Homo
sapiens]
Length = 3097
Score = 32.7 bits (73), Expect = 0.21
Identities = 36/112 (32%), Positives = 45/112 (40%), Gaps = 28/112 (25%)
Query: 90 ALTAPLMCPRLKAEHSRIHAGRPGDWLPNSGQDLGGTQGDWGPAPQGFGSRSG--TSPGN 147
ALT+P+ E+ R H+G G SG GG G AP G SG +S G
Sbjct: 2279 ALTSPI-------EYQRNHSGGGGG--GGSGGSGGGGGSGGGGAPSGGSGHSGGPSSCGG 2329
Query: 148 QHGSSGS-----------HPPEAVSGSHPTPA------GQSSDGSELPEVGA 182
+S S HPP VS + + A G S+ G LP GA
Sbjct: 2330 APSTSRSRPSRIPQPVRHHPPVLVSSAASSQAEADKMSGTSTPGPSLPPPGA 2381
>gi|167234419 thyroid hormone receptor associated protein 3 [Homo
sapiens]
Length = 955
Score = 32.7 bits (73), Expect = 0.21
Identities = 29/101 (28%), Positives = 38/101 (37%), Gaps = 3/101 (2%)
Query: 93 APLMCPRLKAEHSRIHAGRPGDWLPNSGQDLGGTQGDWGPAPQGFGSRSGTSPGNQHGSS 152
+P + L++ R + RP +P L T P G G +SGT G S
Sbjct: 248 SPALKSPLQSVVVRRRSPRPSP-VPKPSPPLSSTSQMGSTLPSGAGYQSGTHQGQFDHGS 306
Query: 153 GSHPPEAVS--GSHPTPAGQSSDGSELPEVGARQGLCSTLR 191
GS P S G P G + S+ E A G T R
Sbjct: 307 GSLSPSKKSPVGKSPPSTGSTYGSSQKEESAASGGAAYTKR 347
>gi|239753721 PREDICTED: hypothetical protein [Homo sapiens]
Length = 342
Score = 32.3 bits (72), Expect = 0.28
Identities = 50/165 (30%), Positives = 62/165 (37%), Gaps = 35/165 (21%)
Query: 12 PPA----PRGWTHRPQSWPCPEEMLVVFLLIHSPVLHCWGQTRLHPRT-HDFKRKKPLSS 66
PPA PR T RP + +LV L+ V H Q + R H + L S
Sbjct: 14 PPAASGCPRCGTQRPIGVALLQRLLVP--LVVQEVEHSEHQQQCIARAQHQRLPTEHLHS 71
Query: 67 NLVTGKRSAWKPCLQPLLTPG-RAALTAPLMCPRLKAE---------HSRIHAGR----- 111
G ++W P PL G R L PR +A H R + GR
Sbjct: 72 ERGRGPAASWAP--GPLREQGTRRGCRRSLEQPRERARGQSSLRAAAHHRHNPGRRRGGG 129
Query: 112 -----PGD---WL--PNSGQDLGGTQGDWGPAPQGFGSRSGTSPG 146
GD WL P G L G +G W PAP+ GS +PG
Sbjct: 130 SPAAREGDAAGWLLAPGLGPRLRGGRGGWSPAPKA-GSPMAAAPG 173
>gi|239748254 PREDICTED: hypothetical protein XP_002346600 [Homo
sapiens]
Length = 342
Score = 32.3 bits (72), Expect = 0.28
Identities = 50/165 (30%), Positives = 62/165 (37%), Gaps = 35/165 (21%)
Query: 12 PPA----PRGWTHRPQSWPCPEEMLVVFLLIHSPVLHCWGQTRLHPRT-HDFKRKKPLSS 66
PPA PR T RP + +LV L+ V H Q + R H + L S
Sbjct: 14 PPAASGCPRCGTQRPIGVALLQRLLVP--LVVQEVEHSEHQQQCIARAQHQRLPTEHLHS 71
Query: 67 NLVTGKRSAWKPCLQPLLTPG-RAALTAPLMCPRLKAE---------HSRIHAGR----- 111
G ++W P PL G R L PR +A H R + GR
Sbjct: 72 ERGRGPAASWAP--GPLREQGTRRGCRRSLEQPRERARGQSSLRAAAHHRHNPGRRRGGG 129
Query: 112 -----PGD---WL--PNSGQDLGGTQGDWGPAPQGFGSRSGTSPG 146
GD WL P G L G +G W PAP+ GS +PG
Sbjct: 130 SPAAREGDAAGWLLAPGLGPRLRGGRGGWSPAPKA-GSPMAAAPG 173
>gi|239742155 PREDICTED: hypothetical protein XP_002342442 [Homo
sapiens]
Length = 342
Score = 32.3 bits (72), Expect = 0.28
Identities = 50/165 (30%), Positives = 62/165 (37%), Gaps = 35/165 (21%)
Query: 12 PPA----PRGWTHRPQSWPCPEEMLVVFLLIHSPVLHCWGQTRLHPRT-HDFKRKKPLSS 66
PPA PR T RP + +LV L+ V H Q + R H + L S
Sbjct: 14 PPAASGCPRCGTQRPIGVALLQRLLVP--LVVQEVEHSEHQQQCIARAQHQRLPTEHLHS 71
Query: 67 NLVTGKRSAWKPCLQPLLTPG-RAALTAPLMCPRLKAE---------HSRIHAGR----- 111
G ++W P PL G R L PR +A H R + GR
Sbjct: 72 ERGRGPAASWAP--GPLREQGTRRGCRRSLEQPRERARGQSSLRAAAHHRHNPGRRRGGG 129
Query: 112 -----PGD---WL--PNSGQDLGGTQGDWGPAPQGFGSRSGTSPG 146
GD WL P G L G +G W PAP+ GS +PG
Sbjct: 130 SPAAREGDAAGWLLAPGLGPRLRGGRGGWSPAPKA-GSPMAAAPG 173
>gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens]
Length = 2944
Score = 32.3 bits (72), Expect = 0.28
Identities = 31/99 (31%), Positives = 38/99 (38%), Gaps = 11/99 (11%)
Query: 86 PGRAALTAPLMCPRLKAEHSRIHAGRPGDWLPNSGQDLGGTQGDWGP-APQGF----GSR 140
PG P+ P K E G PG LP GQ G+ G+ GP P G G R
Sbjct: 1429 PGSPGPQGPVGPPGKKGEKGDSEDGAPG--LP--GQP--GSPGEQGPRGPPGAIGPKGDR 1482
Query: 141 SGTSPGNQHGSSGSHPPEAVSGSHPTPAGQSSDGSELPE 179
P + G G P +GS P G++ PE
Sbjct: 1483 GFPGPLGEAGEKGERGPPGPAGSRGLPGVAGRPGAKGPE 1521
Score = 29.6 bits (65), Expect = 1.8
Identities = 21/73 (28%), Positives = 27/73 (36%), Gaps = 8/73 (10%)
Query: 110 GRPGDWLPNSGQDLGGTQGDWG-PAPQGF-------GSRSGTSPGNQHGSSGSHPPEAVS 161
G GD P + + G +GD G P P+G G R P + G G P
Sbjct: 2120 GSNGDQGPKGDRGVPGIKGDRGEPGPRGQDGNPGLPGERGMAGPEGKPGLQGPRGPPGPV 2179
Query: 162 GSHPTPAGQSSDG 174
G H P + G
Sbjct: 2180 GGHGDPGPPGAPG 2192
>gi|154426272 hypothetical protein LOC54540 [Homo sapiens]
Length = 789
Score = 32.3 bits (72), Expect = 0.28
Identities = 23/73 (31%), Positives = 29/73 (39%), Gaps = 15/73 (20%)
Query: 110 GRPGDWLPNSGQDLGGTQGDWGPAPQGFGSRSGTS-------PGNQHGSSGSH------- 155
G GDW P+S G W +P G+ G+S PG S H
Sbjct: 75 GNSGDWDPSSFLSAHKLSGLWN-SPHSSGAMPGSSLGSPPTIPGEAFPVSEHHQHSDLTA 133
Query: 156 PPEAVSGSHPTPA 168
PP + +G HP PA
Sbjct: 134 PPNSPTGHHPQPA 146
>gi|48762934 alpha 2 type I collagen [Homo sapiens]
Length = 1366
Score = 32.0 bits (71), Expect = 0.36
Identities = 25/74 (33%), Positives = 30/74 (40%), Gaps = 5/74 (6%)
Query: 110 GRPGDWLPNSGQDLGGTQGDWGPAPQGFGSRSGTSPGNQHGSSGSHPPEAVSGSHPTPAG 169
G PG+ P G G GPA + G+R T P G +G+ P SG P G
Sbjct: 949 GYPGNIGPVGAAGAPGPHGPVGPAGK-HGNRGETGPSGPVGPAGAVGPRGPSG----PQG 1003
Query: 170 QSSDGSELPEVGAR 183
D E E G R
Sbjct: 1004 IRGDKGEPGEKGPR 1017
>gi|47778921 alpha 1 type XIX collagen precursor [Homo sapiens]
Length = 1142
Score = 32.0 bits (71), Expect = 0.36
Identities = 26/84 (30%), Positives = 34/84 (40%), Gaps = 8/84 (9%)
Query: 110 GRPGDWLPNSGQDLGGTQGDWGP-APQGF----GSRSGTSPGNQHGSSGSHPPEAVSGSH 164
G GD P L G+ G GP P G G R T P + G G P + G H
Sbjct: 376 GEKGDTGPPGPPALPGSLGIQGPQGPPGKEGQRGRRGKTGPPGKPGPPGPPGPPGIQGIH 435
Query: 165 PTPAG---QSSDGSELPEVGARQG 185
T G + + G++ E G +G
Sbjct: 436 QTLGGYYNKDNKGNDEHEAGGLKG 459
Score = 32.0 bits (71), Expect = 0.36
Identities = 21/66 (31%), Positives = 24/66 (36%), Gaps = 1/66 (1%)
Query: 110 GRPGDWLPNSGQDLGGTQGDWGP-APQGFGSRSGTSPGNQHGSSGSHPPEAVSGSHPTPA 168
G PG P + L G G G PQG G T G G P + G TP
Sbjct: 597 GAPGPRGPKGERGLPGVHGSPGDIGPQGIGIPGRTGAQGPAGEPGIQGPRGLPGLPGTPG 656
Query: 169 GQSSDG 174
+DG
Sbjct: 657 TPGNDG 662
>gi|61966701 dorsal neural-tube nuclear protein [Homo sapiens]
Length = 398
Score = 32.0 bits (71), Expect = 0.36
Identities = 34/133 (25%), Positives = 48/133 (36%), Gaps = 30/133 (22%)
Query: 73 RSAWKPCLQPLLTPGRAALTAPLMCPRLKAEHSRIHAGRPGDWLPNSGQDLGGTQGDWGP 132
RS W+P G + + P+ R + S G PG LP S + G P
Sbjct: 134 RSPWRP--------GSSKVWTPVSKRRCDSGGSATRQGSPGAVLPRSAV---WSTGPTSP 182
Query: 133 APQGFGSRSGTSPGNQHGSSGSHP-------------------PEAVSGSHPTPAGQSSD 173
A S SG + GS+GS P E ++G+ SS
Sbjct: 183 ATPRPSSASGGFVDSSEGSAGSGPLWCSAESCLPSTRRRPSLSQERLAGAGTPLPWASSS 242
Query: 174 GSELPEVGARQGL 186
+ P +G R+GL
Sbjct: 243 PTSTPALGGRRGL 255
>gi|153285461 fibroblast growth factor 2 [Homo sapiens]
Length = 288
Score = 31.6 bits (70), Expect = 0.47
Identities = 39/126 (30%), Positives = 49/126 (38%), Gaps = 30/126 (23%)
Query: 74 SAWKPCLQPLLTPGRAALTAPLMCPRLKAEHSRIHAGRPGDWLPNSGQDLG--------- 124
+AW+ L P R P + PR +A S GR + P SG LG
Sbjct: 36 AAWEAAL-----PRRRPRRHPSVNPRSRAAGSPRTRGRRTEERP-SGSRLGDRGRGRALP 89
Query: 125 ----GTQGDWGPAPQGFGSRSGTSPGNQHGSSGSHPPEAVSGSHPTPAGQSSDGS----- 175
G +G G AP+ G R G G++ A GS P PAG + GS
Sbjct: 90 GGRLGGRGR-GRAPERVGGR-----GRGRGTAAPRAAPAARGSRPGPAGTMAAGSITTLP 143
Query: 176 ELPEVG 181
LPE G
Sbjct: 144 ALPEDG 149
>gi|11761629 fibrinogen, alpha polypeptide isoform alpha
preproprotein [Homo sapiens]
Length = 644
Score = 31.6 bits (70), Expect = 0.47
Identities = 22/70 (31%), Positives = 27/70 (38%), Gaps = 2/70 (2%)
Query: 110 GRPGDWLPNSGQDLGGTQGDWGPAPQGFGSRSGTSPGNQHGSSGSHPPEAVSGSHPTPAG 169
G G W NSG G+ G+ P GS +PG+ S H S S T
Sbjct: 329 GSTGSW--NSGSSGTGSTGNQNPGSPRPGSTGTWNPGSSERGSAGHWTSESSVSGSTGQW 386
Query: 170 QSSDGSELPE 179
S GS P+
Sbjct: 387 HSESGSFRPD 396
Score = 28.1 bits (61), Expect = 5.2
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 8/68 (11%)
Query: 113 GDWLPNSGQDLGGTQGDWGPAPQGFGSRSGTSPGNQ-HGSSGSHPPEAVSGSHPT-PAGQ 170
G W NSG G+ G+ P G G + PG+ GS+GS SGS T G
Sbjct: 293 GSW--NSGSSGPGSTGNRNPGSSGTGGTATWKPGSSGPGSTGSWN----SGSSGTGSTGN 346
Query: 171 SSDGSELP 178
+ GS P
Sbjct: 347 QNPGSPRP 354
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.132 0.443
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,885,734
Number of Sequences: 37866
Number of extensions: 646526
Number of successful extensions: 3397
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 200
Number of HSP's that attempted gapping in prelim test: 3047
Number of HSP's gapped (non-prelim): 509
length of query: 201
length of database: 18,247,518
effective HSP length: 97
effective length of query: 104
effective length of database: 14,574,516
effective search space: 1515749664
effective search space used: 1515749664
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.