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Search of human proteins with 239755585
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239755585 PREDICTED: hypothetical protein [Homo sapiens]
(350 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239755585 PREDICTED: hypothetical protein [Homo sapiens] 734 0.0
gi|169202233 PREDICTED: hypothetical protein [Homo sapiens] 718 0.0
gi|239750101 PREDICTED: hypothetical protein [Homo sapiens] 673 0.0
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 41 0.002
gi|156071470 hyperpolarization activated cyclic nucleotide-gated... 40 0.002
gi|239747641 PREDICTED: hypothetical protein XP_002347916 [Homo ... 40 0.002
gi|239754512 PREDICTED: hypothetical protein [Homo sapiens] 39 0.007
gi|239751123 PREDICTED: hypothetical protein XP_002347725 [Homo ... 39 0.007
gi|239749073 PREDICTED: hypothetical protein [Homo sapiens] 39 0.007
gi|239743099 PREDICTED: hypothetical protein XP_002342754 [Homo ... 39 0.007
gi|239508751 PREDICTED: hypothetical protein [Homo sapiens] 39 0.007
gi|153791350 replication initiator 1 isoform 1 [Homo sapiens] 39 0.007
gi|153792539 replication initiator 1 isoform 1 [Homo sapiens] 39 0.007
gi|153792647 replication initiator 1 isoform 3 [Homo sapiens] 39 0.007
gi|153791994 replication initiator 1 isoform 1 [Homo sapiens] 39 0.007
gi|153792074 proline rich 12 [Homo sapiens] 39 0.009
gi|188497689 chromatin licensing and DNA replication factor 1 [H... 38 0.015
gi|156416026 zinc finger protein 219 [Homo sapiens] 38 0.015
gi|156415998 zinc finger protein 219 [Homo sapiens] 38 0.015
gi|27262645 ataxin 2 related protein isoform B [Homo sapiens] 38 0.015
gi|27262653 ataxin 2 related protein isoform E [Homo sapiens] 38 0.015
gi|27262649 ataxin 2 related protein isoform C [Homo sapiens] 38 0.015
gi|156415996 zinc finger protein 219 [Homo sapiens] 38 0.015
gi|27262647 ataxin 2 related protein isoform A [Homo sapiens] 38 0.015
gi|27262651 ataxin 2 related protein isoform D [Homo sapiens] 38 0.015
gi|157168329 formin 1 [Homo sapiens] 37 0.020
gi|239741603 PREDICTED: hypothetical protein XP_002342247 [Homo ... 37 0.020
gi|145301567 hypothetical protein LOC56006 [Homo sapiens] 37 0.020
gi|46048439 N-acetyltransferase 6 [Homo sapiens] 37 0.020
gi|183396804 Regulation of nuclear pre-mRNA domain containing 2 ... 37 0.020
>gi|239755585 PREDICTED: hypothetical protein [Homo sapiens]
Length = 350
Score = 734 bits (1895), Expect = 0.0
Identities = 350/350 (100%), Positives = 350/350 (100%)
Query: 1 MVQCFADGALRPRPSPHGVQGEKPAPIPPPPAQESNGASCGATPHNSLIPPPLLPHYPCP 60
MVQCFADGALRPRPSPHGVQGEKPAPIPPPPAQESNGASCGATPHNSLIPPPLLPHYPCP
Sbjct: 1 MVQCFADGALRPRPSPHGVQGEKPAPIPPPPAQESNGASCGATPHNSLIPPPLLPHYPCP 60
Query: 61 LPYEHLADSVEAVLPKALVEGGHLASCHVEWLPGGKLPRLPGVGHGCLVTRGAHEVHGDP 120
LPYEHLADSVEAVLPKALVEGGHLASCHVEWLPGGKLPRLPGVGHGCLVTRGAHEVHGDP
Sbjct: 61 LPYEHLADSVEAVLPKALVEGGHLASCHVEWLPGGKLPRLPGVGHGCLVTRGAHEVHGDP 120
Query: 121 GAHVGAVAAQRVGQHRGQLRLLLGGREHRHGQRALPALQQTRQVQQVVHAGVRGQDHIVG 180
GAHVGAVAAQRVGQHRGQLRLLLGGREHRHGQRALPALQQTRQVQQVVHAGVRGQDHIVG
Sbjct: 121 GAHVGAVAAQRVGQHRGQLRLLLGGREHRHGQRALPALQQTRQVQQVVHAGVRGQDHIVG 180
Query: 181 VHGGLQQAPVDAVIAASVQDASRGQRGAELRLDLVHGPWGRGKELKILVLLLLPVQSGQQ 240
VHGGLQQAPVDAVIAASVQDASRGQRGAELRLDLVHGPWGRGKELKILVLLLLPVQSGQQ
Sbjct: 181 VHGGLQQAPVDAVIAASVQDASRGQRGAELRLDLVHGPWGRGKELKILVLLLLPVQSGQQ 240
Query: 241 RQVEQLQHRHQHERGQQQLVEGAPDGVGHLHGSRGSGRAATTTRPQTTPAAASPDLPQPA 300
RQVEQLQHRHQHERGQQQLVEGAPDGVGHLHGSRGSGRAATTTRPQTTPAAASPDLPQPA
Sbjct: 241 RQVEQLQHRHQHERGQQQLVEGAPDGVGHLHGSRGSGRAATTTRPQTTPAAASPDLPQPA 300
Query: 301 ERSRGEPRPAEPRAPPRPPPAARPQCPVQCECLLMETGCFCGNPGLSAEL 350
ERSRGEPRPAEPRAPPRPPPAARPQCPVQCECLLMETGCFCGNPGLSAEL
Sbjct: 301 ERSRGEPRPAEPRAPPRPPPAARPQCPVQCECLLMETGCFCGNPGLSAEL 350
>gi|169202233 PREDICTED: hypothetical protein [Homo sapiens]
Length = 381
Score = 718 bits (1853), Expect = 0.0
Identities = 350/381 (91%), Positives = 350/381 (91%), Gaps = 31/381 (8%)
Query: 1 MVQCFADGALRPRPSPHGVQGEKPAPIPPPPAQESNGASCGATPHNSLIPPPLLPHYPCP 60
MVQCFADGALRPRPSPHGVQGEKPAPIPPPPAQESNGASCGATPHNSLIPPPLLPHYPCP
Sbjct: 1 MVQCFADGALRPRPSPHGVQGEKPAPIPPPPAQESNGASCGATPHNSLIPPPLLPHYPCP 60
Query: 61 LPYEHLADSVEAVLPKALVEGGHLASCHVEWLPGGKLPRLPGVGHGCLVTRGAHEVHGDP 120
LPYEHLADSVEAVLPKALVEGGHLASCHVEWLPGGKLPRLPGVGHGCLVTRGAHEVHGDP
Sbjct: 61 LPYEHLADSVEAVLPKALVEGGHLASCHVEWLPGGKLPRLPGVGHGCLVTRGAHEVHGDP 120
Query: 121 GAHVGAVAAQRVGQHRGQLRLLLGGREHRHGQRALPALQQTRQVQQVVHAGVRGQDHIVG 180
GAHVGAVAAQRVGQHRGQLRLLLGGREHRHGQRALPALQQTRQVQQVVHAGVRGQDHIVG
Sbjct: 121 GAHVGAVAAQRVGQHRGQLRLLLGGREHRHGQRALPALQQTRQVQQVVHAGVRGQDHIVG 180
Query: 181 VHGGLQQAPVDAVIAASVQDASRGQRGAELRLDLVHGPWGRGKELKILVLLLLPVQSGQQ 240
VHGGLQQAPVDAVIAASVQDASRGQRGAELRLDLVHGPWGRGKELKILVLLLLPVQSGQQ
Sbjct: 181 VHGGLQQAPVDAVIAASVQDASRGQRGAELRLDLVHGPWGRGKELKILVLLLLPVQSGQQ 240
Query: 241 RQVEQLQHRHQHERGQQQLVEGAPDGVGHLHGSRGSGRAATTTRPQTTPAAASPDLPQPA 300
RQVEQLQHRHQHERGQQQLVEGAPDGVGHLHGSRGSGRAATTTRPQTTPAAASPDLPQPA
Sbjct: 241 RQVEQLQHRHQHERGQQQLVEGAPDGVGHLHGSRGSGRAATTTRPQTTPAAASPDLPQPA 300
Query: 301 ERSRGEPRPAEPRAPPRPPPAAR-------------------------------PQCPVQ 329
ERSRGEPRPAEPRAPPRPPPAAR PQCPVQ
Sbjct: 301 ERSRGEPRPAEPRAPPRPPPAARRPPPATAPSPRRAGSPPTREEEPRPRRSAARPQCPVQ 360
Query: 330 CECLLMETGCFCGNPGLSAEL 350
CECLLMETGCFCGNPGLSAEL
Sbjct: 361 CECLLMETGCFCGNPGLSAEL 381
>gi|239750101 PREDICTED: hypothetical protein [Homo sapiens]
Length = 365
Score = 673 bits (1737), Expect = 0.0
Identities = 324/327 (99%), Positives = 324/327 (99%)
Query: 1 MVQCFADGALRPRPSPHGVQGEKPAPIPPPPAQESNGASCGATPHNSLIPPPLLPHYPCP 60
MVQCFADGALRPRPSPHGVQGEKPAPIPPPPAQESNGASCGATPHNSLIPPPLLPHYPCP
Sbjct: 1 MVQCFADGALRPRPSPHGVQGEKPAPIPPPPAQESNGASCGATPHNSLIPPPLLPHYPCP 60
Query: 61 LPYEHLADSVEAVLPKALVEGGHLASCHVEWLPGGKLPRLPGVGHGCLVTRGAHEVHGDP 120
LPYEHLADSVEAVLPKALVEGGHLASCHVEWLPGGKLPRLPGVGHGCLVTRGAHEVHGDP
Sbjct: 61 LPYEHLADSVEAVLPKALVEGGHLASCHVEWLPGGKLPRLPGVGHGCLVTRGAHEVHGDP 120
Query: 121 GAHVGAVAAQRVGQHRGQLRLLLGGREHRHGQRALPALQQTRQVQQVVHAGVRGQDHIVG 180
GAHVGAVAAQRVGQHRGQLRLLLGGREHRHGQRALPALQQTRQVQQVVHAGVRGQDHIVG
Sbjct: 121 GAHVGAVAAQRVGQHRGQLRLLLGGREHRHGQRALPALQQTRQVQQVVHAGVRGQDHIVG 180
Query: 181 VHGGLQQAPVDAVIAASVQDASRGQRGAELRLDLVHGPWGRGKELKILVLLLLPVQSGQQ 240
VHGGLQQAPVDAVIAASVQDASRGQRGAELRLDLVHGPWGRGKELKILVLLLLPVQSGQQ
Sbjct: 181 VHGGLQQAPVDAVIAASVQDASRGQRGAELRLDLVHGPWGRGKELKILVLLLLPVQSGQQ 240
Query: 241 RQVEQLQHRHQHERGQQQLVEGAPDGVGHLHGSRGSGRAATTTRPQTTPAAASPDLPQPA 300
RQVEQLQHRHQHERGQQQLVEGAPDGVGHLHGSRGSGRAATTTRPQTTPAAASPDLPQPA
Sbjct: 241 RQVEQLQHRHQHERGQQQLVEGAPDGVGHLHGSRGSGRAATTTRPQTTPAAASPDLPQPA 300
Query: 301 ERSRGEPRPAEPRAPPRPPPAARPQCP 327
ERSRGEPRPAEPRAPPRPPPAAR P
Sbjct: 301 ERSRGEPRPAEPRAPPRPPPAARRPPP 327
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 40.8 bits (94), Expect = 0.002
Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Query: 262 GAPDGVGHLHGSRGSGRAATTTRPQTTPAAAS--PDLPQPAERSRGEPRPAEPRAPPRPP 319
G P+G G++ G +PQ P P P P R +G P P P PP
Sbjct: 223 GKPEGPPSQGGNKPQGPPPHPGKPQGPPPQEGNKPQRPPPPGRPQGPPPPGGNPQQPLPP 282
Query: 320 PAARPQCP 327
PA +PQ P
Sbjct: 283 PAGKPQGP 290
Score = 33.1 bits (74), Expect = 0.38
Identities = 23/67 (34%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
Query: 262 GAPDGVGHLHGSRGSGRAATTTRPQ-TTPAAASPD--LPQPAERSRGEPRPAEPRAPPRP 318
G P G G++ R RPQ P +P LP PA + +G P P + P RP
Sbjct: 244 GKPQGPPPQEGNKPQ-RPPPPGRPQGPPPPGGNPQQPLPPPAGKPQGPPPPPQGGRPHRP 302
Query: 319 PPAARPQ 325
P PQ
Sbjct: 303 PQGQPPQ 309
Score = 32.0 bits (71), Expect = 0.85
Identities = 22/76 (28%), Positives = 31/76 (40%), Gaps = 17/76 (22%)
Query: 262 GAPDGVGHLHGSRGSGRAATTTRPQTTPAAASPDLPQPAERSRGEP-RPAEPRAPPR--- 317
G P+G G++ G +P+ P PQ +S+G P RP +P PP
Sbjct: 181 GKPEGPPPQGGNQSQGPPPRPGKPEGPP-------PQGGNQSQGPPPRPGKPEGPPSQGG 233
Query: 318 ------PPPAARPQCP 327
PP +PQ P
Sbjct: 234 NKPQGPPPHPGKPQGP 249
Score = 31.2 bits (69), Expect = 1.4
Identities = 20/65 (30%), Positives = 26/65 (40%), Gaps = 8/65 (12%)
Query: 6 ADGALRPR-PSPHGVQGEKPAPI-------PPPPAQESNGASCGATPHNSLIPPPLLPHY 57
+ G +P+ P PH + + P P PPPP + G P L PP P
Sbjct: 230 SQGGNKPQGPPPHPGKPQGPPPQEGNKPQRPPPPGRPQGPPPPGGNPQQPLPPPAGKPQG 289
Query: 58 PCPLP 62
P P P
Sbjct: 290 PPPPP 294
Score = 30.4 bits (67), Expect = 2.5
Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 17/76 (22%)
Query: 262 GAPDGVGHLHGSRGSGRAATTTRPQTTPAAASPDLPQPAERSRGEP-RPAEPRAPP---- 316
G P+G G++ G +P+ P PQ +S+G P RP +P PP
Sbjct: 76 GKPEGPPPQGGNQSQGPPPRPGKPEGQP-------PQGGNQSQGPPPRPGKPEGPPPQGG 128
Query: 317 -----RPPPAARPQCP 327
PP +P+ P
Sbjct: 129 NQSQGPPPRPGKPEGP 144
Score = 30.4 bits (67), Expect = 2.5
Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 17/76 (22%)
Query: 262 GAPDGVGHLHGSRGSGRAATTTRPQTTPAAASPDLPQPAERSRGEP-RPAEPRAPP---- 316
G P+G G++ G +P+ P PQ +S+G P RP +P PP
Sbjct: 97 GKPEGQPPQGGNQSQGPPPRPGKPEGPP-------PQGGNQSQGPPPRPGKPEGPPPQGG 149
Query: 317 -----RPPPAARPQCP 327
PP +P+ P
Sbjct: 150 NQSQGPPPRPGKPEGP 165
Score = 30.4 bits (67), Expect = 2.5
Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 17/76 (22%)
Query: 262 GAPDGVGHLHGSRGSGRAATTTRPQTTPAAASPDLPQPAERSRGEP-RPAEPRAPP---- 316
G P+G G++ G +P+ P PQ +S+G P RP +P PP
Sbjct: 118 GKPEGPPPQGGNQSQGPPPRPGKPEGPP-------PQGGNQSQGPPPRPGKPEGPPPQGG 170
Query: 317 -----RPPPAARPQCP 327
PP +P+ P
Sbjct: 171 NQSQGPPPHPGKPEGP 186
Score = 30.0 bits (66), Expect = 3.2
Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 17/76 (22%)
Query: 262 GAPDGVGHLHGSRGSGRAATTTRPQTTPAAASPDLPQPAERSRGEP-RPAEPRAPP---- 316
G P+G G++ G +P+ P PQ +S+G P RP +P PP
Sbjct: 160 GKPEGPPPQGGNQSQGPPPHPGKPEGPP-------PQGGNQSQGPPPRPGKPEGPPPQGG 212
Query: 317 -----RPPPAARPQCP 327
PP +P+ P
Sbjct: 213 NQSQGPPPRPGKPEGP 228
>gi|156071470 hyperpolarization activated cyclic nucleotide-gated
potassium channel 2 [Homo sapiens]
Length = 889
Score = 40.4 bits (93), Expect = 0.002
Identities = 29/84 (34%), Positives = 32/84 (38%), Gaps = 16/84 (19%)
Query: 275 GSGRAATTTRPQTTPAAASPDLPQPAERSRGEPRPAEPRAPPRPPPAARPQCPVQCECL- 333
G GR + P TPA P P PA + P P P PP P PA PQ P + E L
Sbjct: 6 GGGRPGES--PGATPAPGPPPPPPPAPPQQQPPPPPPPAPPPGPGPAP-PQHPPRAEALP 62
Query: 334 ------------LMETGCFCGNPG 345
L CG PG
Sbjct: 63 PEAADEGGPRGRLRSRDSSCGRPG 86
Score = 35.8 bits (81), Expect = 0.059
Identities = 27/76 (35%), Positives = 31/76 (40%), Gaps = 12/76 (15%)
Query: 8 GALRPRPSPHGVQGEKPAPIPPP-PAQESNGASCGATPHNSLIPPPLLPHYPCPLPYEHL 66
G RP SP P P PPP P Q+ PPP P P P P +H
Sbjct: 6 GGGRPGESPGATPAPGPPPPPPPAPPQQQPPPP----------PPPAPPPGPGPAPPQH- 54
Query: 67 ADSVEAVLPKALVEGG 82
EA+ P+A EGG
Sbjct: 55 PPRAEALPPEAADEGG 70
Score = 35.8 bits (81), Expect = 0.059
Identities = 22/54 (40%), Positives = 23/54 (42%), Gaps = 3/54 (5%)
Query: 275 GSGRAATTTRPQTTPAAASPDLPQPAERSRGEPRPAEPRAPPRPPPAARPQCPV 328
GS R P PAAASP P PA PA PRAP P P P+
Sbjct: 753 GSPRLVRRPPPGPAPAAASPGPPPPASPPGA---PASPRAPRTSPYGGLPAAPL 803
>gi|239747641 PREDICTED: hypothetical protein XP_002347916 [Homo
sapiens]
Length = 193
Score = 40.4 bits (93), Expect = 0.002
Identities = 37/119 (31%), Positives = 51/119 (42%), Gaps = 17/119 (14%)
Query: 220 GRGKELKILVLLLLPVQSGQQRQVEQLQHRH---QHERGQQQLVEGAPDGVGHLHG---- 272
GR E+ ++ L +P+ + +++ Q H Q +R QQ+ +PD
Sbjct: 26 GRRDEVIPVLQLQVPLSGAEGKELLAAQAAHRPRQQQRQQQRPRPRSPDPAARGQHVPEL 85
Query: 273 -SRGSGRAATTT-------RPQTTPAAASPDLPQPAERSRGEPRPAEPRAPPRPPPAAR 323
SR G AA T RP P P +P P +RG R E RAPPRP A R
Sbjct: 86 RSRKPGPAARTEEGGDVTGRPWQPPLLPPPGVPTPG--NRGGERRGERRAPPRPAGAPR 142
>gi|239754512 PREDICTED: hypothetical protein [Homo sapiens]
Length = 556
Score = 38.9 bits (89), Expect = 0.007
Identities = 79/293 (26%), Positives = 109/293 (37%), Gaps = 87/293 (29%)
Query: 117 HGDPGAHVGAVA---AQRVGQHRGQLRLLLGGREHRHGQRALPA-------LQQTRQVQQ 166
HG G HVG V R G G R+ R +H + L A L Q R++
Sbjct: 179 HGRLGVHVGVVVMVVVHRSGYSVGARRVHWVPRGAKHRRLGLEAARAEVGVLGQRRRLPG 238
Query: 167 VVHAGVR----GQDHIVGVHGGLQQAPVDAVIAAS-------VQDASRGQRGAEL-RLDL 214
+ G R I GV G QQ V V+A Q +R R E+ +L +
Sbjct: 239 RLAQGPRRIAANAQLIRGV--GAQQERVHVVVAQGPSGGHHRAQRLARPARPTEIMKLQI 296
Query: 215 ----VHGPWGRGKEL----KILVLLL---LPVQSG---QQRQV-------EQLQHRHQHE 253
+ P G K L K+ +L L LPV + ++R+V Q+Q R + +
Sbjct: 297 SCNNLVAPGGNCKNLRGLGKVRLLCLVGELPVNNPCGPRERRVYPRPPSKSQIQRRIRPK 356
Query: 254 RGQQQLVEGAPDG------------VGHLHGS----RGSG------------------RA 279
R +++ +G P +G+L G RG G A
Sbjct: 357 RSRRRPYQGTPGRDRPLRDCYSGPRLGYLRGPETRRRGGGVWWKGKAGRLAKRCGERHEA 416
Query: 280 ATTTRPQTTPAA------ASPDLPQPAERSRGEPRPAEPRAPPRPPPAARPQC 326
+P+ P A +P P PA RG PRP P PP PPP R C
Sbjct: 417 PEQGKPRLPPQAWHDQGRDAPPGPTPAR--RGLPRPPPPPPPPLPPPPRREPC 467
>gi|239751123 PREDICTED: hypothetical protein XP_002347725 [Homo
sapiens]
Length = 296
Score = 38.9 bits (89), Expect = 0.007
Identities = 37/116 (31%), Positives = 46/116 (39%), Gaps = 27/116 (23%)
Query: 232 LLPVQSGQQRQVEQL----QHRHQHERGQQQLVEGAPD----------GVGHLHGSRGSG 277
L P+Q + V+ L QHRH + +L+ G G GHL + G+
Sbjct: 138 LAPMQRAEPPAVQALRVLLQHRHDVTLAEGELIRGLGHIVIERFGQHVGHGHLAAAPGAW 197
Query: 278 RAAT-------TTRPQTTPAAASPDLPQP--AERSRGEPRPAEPRAP----PRPPP 320
RAA + R P S P P ERSR PA P AP PR PP
Sbjct: 198 RAAAPAGWGLGSARAAQRPREGSRRFPAPPAPERSRTPDCPAAPAAPRMRRPRRPP 253
>gi|239749073 PREDICTED: hypothetical protein [Homo sapiens]
Length = 884
Score = 38.9 bits (89), Expect = 0.007
Identities = 79/293 (26%), Positives = 109/293 (37%), Gaps = 87/293 (29%)
Query: 117 HGDPGAHVGAVA---AQRVGQHRGQLRLLLGGREHRHGQRALPA-------LQQTRQVQQ 166
HG G HVG V R G G R+ R +H + L A L Q R++
Sbjct: 507 HGRLGVHVGVVVMVVVHRSGYSVGARRVHWVPRGAKHRRLGLEAARAEVGVLGQRRRLPG 566
Query: 167 VVHAGVR----GQDHIVGVHGGLQQAPVDAVIAAS-------VQDASRGQRGAEL-RLDL 214
+ G R I GV G QQ V V+A Q +R R E+ +L +
Sbjct: 567 RLAQGPRRIAANAQLIRGV--GAQQERVHVVVAQGPSGGHHRAQRLARPARPTEIMKLQI 624
Query: 215 ----VHGPWGRGKEL----KILVLLL---LPVQSG---QQRQV-------EQLQHRHQHE 253
+ P G K L K+ +L L LPV + ++R+V Q+Q R + +
Sbjct: 625 SCNNLVAPGGNCKNLRGLGKVRLLCLVGELPVNNPCGPRERRVYPRPPSKSQIQRRIRPK 684
Query: 254 RGQQQLVEGAPDG------------VGHLHGS----RGSG------------------RA 279
R +++ +G P +G+L G RG G A
Sbjct: 685 RSRRRPYQGTPGRDRPLRDCYSGPRLGYLRGPETRRRGGGVWWKGKAGRLAKRCGERHEA 744
Query: 280 ATTTRPQTTPAA------ASPDLPQPAERSRGEPRPAEPRAPPRPPPAARPQC 326
+P+ P A +P P PA RG PRP P PP PPP R C
Sbjct: 745 PEQGKPRLPPQAWHDQGRDAPPGPTPAR--RGLPRPPPPPPPPLPPPPRREPC 795
>gi|239743099 PREDICTED: hypothetical protein XP_002342754 [Homo
sapiens]
Length = 884
Score = 38.9 bits (89), Expect = 0.007
Identities = 79/293 (26%), Positives = 109/293 (37%), Gaps = 87/293 (29%)
Query: 117 HGDPGAHVGAVA---AQRVGQHRGQLRLLLGGREHRHGQRALPA-------LQQTRQVQQ 166
HG G HVG V R G G R+ R +H + L A L Q R++
Sbjct: 507 HGRLGVHVGVVVMVVVHRSGYSVGARRVHWVPRGAKHRRLGLEAARAEVGVLGQRRRLPG 566
Query: 167 VVHAGVR----GQDHIVGVHGGLQQAPVDAVIAAS-------VQDASRGQRGAEL-RLDL 214
+ G R I GV G QQ V V+A Q +R R E+ +L +
Sbjct: 567 RLAQGPRRIAANAQLIRGV--GAQQERVHVVVAQGPSGGHHRAQRLARPARPTEIMKLQI 624
Query: 215 ----VHGPWGRGKEL----KILVLLL---LPVQSG---QQRQV-------EQLQHRHQHE 253
+ P G K L K+ +L L LPV + ++R+V Q+Q R + +
Sbjct: 625 SCNNLVAPGGNCKNLRGLGKVRLLCLVGELPVNNPCGPRERRVYPRPPSKSQIQRRIRPK 684
Query: 254 RGQQQLVEGAPDG------------VGHLHGS----RGSG------------------RA 279
R +++ +G P +G+L G RG G A
Sbjct: 685 RSRRRPYQGTPGRDRPLRDCYSGPRLGYLRGPETRRRGGGVWWKGKAGRLAKRCGERHEA 744
Query: 280 ATTTRPQTTPAA------ASPDLPQPAERSRGEPRPAEPRAPPRPPPAARPQC 326
+P+ P A +P P PA RG PRP P PP PPP R C
Sbjct: 745 PEQGKPRLPPQAWHDQGRDAPPGPTPAR--RGLPRPPPPPPPPLPPPPRREPC 795
>gi|239508751 PREDICTED: hypothetical protein [Homo sapiens]
Length = 884
Score = 38.9 bits (89), Expect = 0.007
Identities = 79/293 (26%), Positives = 109/293 (37%), Gaps = 87/293 (29%)
Query: 117 HGDPGAHVGAVA---AQRVGQHRGQLRLLLGGREHRHGQRALPA-------LQQTRQVQQ 166
HG G HVG V R G G R+ R +H + L A L Q R++
Sbjct: 507 HGRLGVHVGVVVMVVVHRSGYSVGARRVHWVPRGAKHRRLGLEAARAEVGVLGQRRRLPG 566
Query: 167 VVHAGVR----GQDHIVGVHGGLQQAPVDAVIAAS-------VQDASRGQRGAEL-RLDL 214
+ G R I GV G QQ V V+A Q +R R E+ +L +
Sbjct: 567 RLAQGPRRIAANAQLIRGV--GAQQERVHVVVAQGPSGGHHRAQRLARPARPTEIMKLQI 624
Query: 215 ----VHGPWGRGKEL----KILVLLL---LPVQSG---QQRQV-------EQLQHRHQHE 253
+ P G K L K+ +L L LPV + ++R+V Q+Q R + +
Sbjct: 625 SCNNLVAPGGNCKNLRGLGKVRLLCLVGELPVNNPCGPRERRVYPRPPSKSQIQRRIRPK 684
Query: 254 RGQQQLVEGAPDG------------VGHLHGS----RGSG------------------RA 279
R +++ +G P +G+L G RG G A
Sbjct: 685 RSRRRPYQGTPGRDRPLRDCYSGPRLGYLRGPETRRRGGGVWWKGKAGRLAKRCGERHEA 744
Query: 280 ATTTRPQTTPAA------ASPDLPQPAERSRGEPRPAEPRAPPRPPPAARPQC 326
+P+ P A +P P PA RG PRP P PP PPP R C
Sbjct: 745 PEQGKPRLPPQAWHDQGRDAPPGPTPAR--RGLPRPPPPPPPPLPPPPRREPC 795
>gi|153791350 replication initiator 1 isoform 1 [Homo sapiens]
Length = 567
Score = 38.9 bits (89), Expect = 0.007
Identities = 19/43 (44%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 286 QTTPAAASPDLPQPAERSRGEPRPAEPRAPPR-PPPAARPQCP 327
Q P SP LP + S EP PA P P + PPP A P+ P
Sbjct: 322 QAAPGPGSPQLPAGPQESAAEPTPAVPLKPAQEPPPGAPPEHP 364
>gi|153792539 replication initiator 1 isoform 1 [Homo sapiens]
Length = 567
Score = 38.9 bits (89), Expect = 0.007
Identities = 19/43 (44%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 286 QTTPAAASPDLPQPAERSRGEPRPAEPRAPPR-PPPAARPQCP 327
Q P SP LP + S EP PA P P + PPP A P+ P
Sbjct: 322 QAAPGPGSPQLPAGPQESAAEPTPAVPLKPAQEPPPGAPPEHP 364
>gi|153792647 replication initiator 1 isoform 3 [Homo sapiens]
Length = 624
Score = 38.9 bits (89), Expect = 0.007
Identities = 19/43 (44%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 286 QTTPAAASPDLPQPAERSRGEPRPAEPRAPPR-PPPAARPQCP 327
Q P SP LP + S EP PA P P + PPP A P+ P
Sbjct: 379 QAAPGPGSPQLPAGPQESAAEPTPAVPLKPAQEPPPGAPPEHP 421
>gi|153791994 replication initiator 1 isoform 1 [Homo sapiens]
Length = 567
Score = 38.9 bits (89), Expect = 0.007
Identities = 19/43 (44%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 286 QTTPAAASPDLPQPAERSRGEPRPAEPRAPPR-PPPAARPQCP 327
Q P SP LP + S EP PA P P + PPP A P+ P
Sbjct: 322 QAAPGPGSPQLPAGPQESAAEPTPAVPLKPAQEPPPGAPPEHP 364
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 38.5 bits (88), Expect = 0.009
Identities = 23/57 (40%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Query: 275 GSGRAATTTRPQTTPAAASPDLPQ----PAERSRGEPRPA--EPRAPPRPPPAARPQ 325
G +T P PAAA P P P+ S G P P E + PP PPPA PQ
Sbjct: 1412 GPKDTSTPDGPPLAPAAAVPGPPPLPGLPSANSNGTPEPPLLEEKPPPTPPPAPTPQ 1468
Score = 32.7 bits (73), Expect = 0.50
Identities = 19/43 (44%), Positives = 20/43 (46%), Gaps = 10/43 (23%)
Query: 285 PQTTPAAASPD---LPQPAERSRGEPRPAEPRAPPRPPPAARP 324
P P +SP LP P P PA P PP PPPAA P
Sbjct: 1487 PLVAPTPSSPPPPPLPPP-------PPPAMPSPPPPPPPAAAP 1522
Score = 32.0 bits (71), Expect = 0.85
Identities = 15/41 (36%), Positives = 18/41 (43%)
Query: 280 ATTTRPQTTPAAASPDLPQPAERSRGEPRPAEPRAPPRPPP 320
A T +PQ P P P+ P P+ P PP PPP
Sbjct: 1464 APTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPP 1504
Score = 31.2 bits (69), Expect = 1.4
Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 5/56 (8%)
Query: 11 RPRPSPHGVQGEKPAPIPPP----PAQESNGASCGATPHNSLIPPPLLPHYPCPLP 62
+P P+P +P P PPP PA S TP +S PPPL P P +P
Sbjct: 1456 KPPPTPPPAPTPQPQPPPPPPPPQPALPSPPPLVAPTP-SSPPPPPLPPPPPPAMP 1510
Score = 30.8 bits (68), Expect = 1.9
Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 8/69 (11%)
Query: 270 LHGSRGSGRAATTTRPQTTPAAASPDLPQPAERS--------RGEPRPAEPRAPPRPPPA 321
L S + AA + PQ + + P P ER+ + RPA + PP PPPA
Sbjct: 248 LASSSAAAAAAEQSSPQLYNFSGAAPGPPPPERALPRQDTVIKHYQRPASAQPPPPPPPA 307
Query: 322 ARPQCPVQC 330
Q + C
Sbjct: 308 HALQHYLSC 316
Score = 29.6 bits (65), Expect = 4.2
Identities = 15/46 (32%), Positives = 17/46 (36%)
Query: 282 TTRPQTTPAAASPDLPQPAERSRGEPRPAEPRAPPRPPPAARPQCP 327
T P TP P P P + + P P P PPP P P
Sbjct: 1460 TPPPAPTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPP 1505
Score = 28.9 bits (63), Expect = 7.2
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 8/42 (19%)
Query: 24 PAPIPPPPAQESNGASCGATPHNSLI---PPPLLPHYPCPLP 62
P P+P P+ SNG TP L+ PPP P P P P
Sbjct: 1433 PPPLPGLPSANSNG-----TPEPPLLEEKPPPTPPPAPTPQP 1469
Score = 28.9 bits (63), Expect = 7.2
Identities = 19/57 (33%), Positives = 22/57 (38%), Gaps = 6/57 (10%)
Query: 12 PRPSPHGVQGEKPAPIPPPPAQESNGASCGATPHNSLIPP------PLLPHYPCPLP 62
P P+P P P PP PA S TP + PP P +P P P P
Sbjct: 1461 PPPAPTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSPPPPPP 1517
Score = 28.5 bits (62), Expect = 9.4
Identities = 19/55 (34%), Positives = 20/55 (36%), Gaps = 4/55 (7%)
Query: 10 LRPRPSPHGVQGEKPAPIPPPPAQESNGASCG----ATPHNSLIPPPLLPHYPCP 60
L +P P P P PPPP A P S PPP LP P P
Sbjct: 1453 LEEKPPPTPPPAPTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPP 1507
>gi|188497689 chromatin licensing and DNA replication factor 1 [Homo
sapiens]
Length = 546
Score = 37.7 bits (86), Expect = 0.015
Identities = 20/47 (42%), Positives = 22/47 (46%)
Query: 278 RAATTTRPQTTPAAASPDLPQPAERSRGEPRPAEPRAPPRPPPAARP 324
RA P+ A + L A S G PRPA P PP PPAA P
Sbjct: 366 RARNLISPRMEKALSQLALRSAAPSSPGSPRPALPATPPATPPAASP 412
>gi|156416026 zinc finger protein 219 [Homo sapiens]
Length = 722
Score = 37.7 bits (86), Expect = 0.015
Identities = 23/65 (35%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Query: 271 HGSRGSGRAATTTRPQTTPAAASPDLPQPAERSRGEPRP-AEPRAPPRPPPAA--RPQCP 327
HG+ AAT+ P P P P+P + EP P E A P P PAA P P
Sbjct: 212 HGAPERPLAATSAAPPPQPQPQPPPQPEPRSVPQPEPEPEPEREATPTPAPAAPEEPPAP 271
Query: 328 VQCEC 332
+ C
Sbjct: 272 PEFRC 276
Score = 28.5 bits (62), Expect = 9.4
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 21 GEKPAPIPPPPAQESNGASCGATP 44
G P P PPPP+Q + GA P
Sbjct: 557 GPGPPPEPPPPSQRGSAPQSGAKP 580
>gi|156415998 zinc finger protein 219 [Homo sapiens]
Length = 722
Score = 37.7 bits (86), Expect = 0.015
Identities = 23/65 (35%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Query: 271 HGSRGSGRAATTTRPQTTPAAASPDLPQPAERSRGEPRP-AEPRAPPRPPPAA--RPQCP 327
HG+ AAT+ P P P P+P + EP P E A P P PAA P P
Sbjct: 212 HGAPERPLAATSAAPPPQPQPQPPPQPEPRSVPQPEPEPEPEREATPTPAPAAPEEPPAP 271
Query: 328 VQCEC 332
+ C
Sbjct: 272 PEFRC 276
Score = 28.5 bits (62), Expect = 9.4
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 21 GEKPAPIPPPPAQESNGASCGATP 44
G P P PPPP+Q + GA P
Sbjct: 557 GPGPPPEPPPPSQRGSAPQSGAKP 580
>gi|27262645 ataxin 2 related protein isoform B [Homo sapiens]
Length = 1062
Score = 37.7 bits (86), Expect = 0.015
Identities = 28/83 (33%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Query: 243 VEQLQHRHQHERGQQQLVEGAPDGVGHLHGSRGSGRAATTTRPQTTPAAASPDLPQPAER 302
++Q Q QQ + P G +G G AT+ P PAAASP L A
Sbjct: 7 LQQPSQPQQPPPTQQAVARRPPGGTSPPNGGL-PGPLATSAAPPGPPAAASPCLGPVAAA 65
Query: 303 SRGEPRPAEPRAPPRPPPAARPQ 325
G R AE P+PPP + Q
Sbjct: 66 GSGLRRGAEGILAPQPPPPQQHQ 88
Score = 30.0 bits (66), Expect = 3.2
Identities = 26/84 (30%), Positives = 34/84 (40%), Gaps = 8/84 (9%)
Query: 254 RGQQQLVEGAPDGVGHLHGSRGSGRAATTTRPQTTPAAASPDLPQPAERSRGE----PRP 309
RG L +P G G G + + + Q P + L P+ R GE P P
Sbjct: 382 RGPHHLDNSSPGPGSEARGING-GPSRMSPKAQR-PLRGAKTLSSPSNRPSGETSVPPPP 439
Query: 310 AEPRA-PPRPPPAARPQCPVQCEC 332
A R PPR P +A P P+ C
Sbjct: 440 AVGRMYPPRSPKSAAP-APISASC 462
Score = 28.5 bits (62), Expect = 9.4
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Query: 279 AATTTRPQTTPAAASPDLPQPAERSRGEPRPAEPRAPPRPPP 320
A + + P P P QP + + G P A+ R PP PPP
Sbjct: 1012 ALSASTPSPYPYIGHPQGEQPGQ-APGFPGGADDRIPPLPPP 1052
>gi|27262653 ataxin 2 related protein isoform E [Homo sapiens]
Length = 1044
Score = 37.7 bits (86), Expect = 0.015
Identities = 28/83 (33%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Query: 243 VEQLQHRHQHERGQQQLVEGAPDGVGHLHGSRGSGRAATTTRPQTTPAAASPDLPQPAER 302
++Q Q QQ + P G +G G AT+ P PAAASP L A
Sbjct: 7 LQQPSQPQQPPPTQQAVARRPPGGTSPPNGGL-PGPLATSAAPPGPPAAASPCLGPVAAA 65
Query: 303 SRGEPRPAEPRAPPRPPPAARPQ 325
G R AE P+PPP + Q
Sbjct: 66 GSGLRRGAEGILAPQPPPPQQHQ 88
Score = 30.0 bits (66), Expect = 3.2
Identities = 26/84 (30%), Positives = 34/84 (40%), Gaps = 8/84 (9%)
Query: 254 RGQQQLVEGAPDGVGHLHGSRGSGRAATTTRPQTTPAAASPDLPQPAERSRGE----PRP 309
RG L +P G G G + + + Q P + L P+ R GE P P
Sbjct: 382 RGPHHLDNSSPGPGSEARGING-GPSRMSPKAQR-PLRGAKTLSSPSNRPSGETSVPPPP 439
Query: 310 AEPRA-PPRPPPAARPQCPVQCEC 332
A R PPR P +A P P+ C
Sbjct: 440 AVGRMYPPRSPKSAAP-APISASC 462
>gi|27262649 ataxin 2 related protein isoform C [Homo sapiens]
Length = 1097
Score = 37.7 bits (86), Expect = 0.015
Identities = 28/83 (33%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Query: 243 VEQLQHRHQHERGQQQLVEGAPDGVGHLHGSRGSGRAATTTRPQTTPAAASPDLPQPAER 302
++Q Q QQ + P G +G G AT+ P PAAASP L A
Sbjct: 7 LQQPSQPQQPPPTQQAVARRPPGGTSPPNGGL-PGPLATSAAPPGPPAAASPCLGPVAAA 65
Query: 303 SRGEPRPAEPRAPPRPPPAARPQ 325
G R AE P+PPP + Q
Sbjct: 66 GSGLRRGAEGILAPQPPPPQQHQ 88
Score = 30.0 bits (66), Expect = 3.2
Identities = 26/84 (30%), Positives = 34/84 (40%), Gaps = 8/84 (9%)
Query: 254 RGQQQLVEGAPDGVGHLHGSRGSGRAATTTRPQTTPAAASPDLPQPAERSRGE----PRP 309
RG L +P G G G + + + Q P + L P+ R GE P P
Sbjct: 382 RGPHHLDNSSPGPGSEARGING-GPSRMSPKAQR-PLRGAKTLSSPSNRPSGETSVPPPP 439
Query: 310 AEPRA-PPRPPPAARPQCPVQCEC 332
A R PPR P +A P P+ C
Sbjct: 440 AVGRMYPPRSPKSAAP-APISASC 462
>gi|156415996 zinc finger protein 219 [Homo sapiens]
Length = 722
Score = 37.7 bits (86), Expect = 0.015
Identities = 23/65 (35%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Query: 271 HGSRGSGRAATTTRPQTTPAAASPDLPQPAERSRGEPRP-AEPRAPPRPPPAA--RPQCP 327
HG+ AAT+ P P P P+P + EP P E A P P PAA P P
Sbjct: 212 HGAPERPLAATSAAPPPQPQPQPPPQPEPRSVPQPEPEPEPEREATPTPAPAAPEEPPAP 271
Query: 328 VQCEC 332
+ C
Sbjct: 272 PEFRC 276
Score = 28.5 bits (62), Expect = 9.4
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 21 GEKPAPIPPPPAQESNGASCGATP 44
G P P PPPP+Q + GA P
Sbjct: 557 GPGPPPEPPPPSQRGSAPQSGAKP 580
>gi|27262647 ataxin 2 related protein isoform A [Homo sapiens]
Length = 1075
Score = 37.7 bits (86), Expect = 0.015
Identities = 28/83 (33%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Query: 243 VEQLQHRHQHERGQQQLVEGAPDGVGHLHGSRGSGRAATTTRPQTTPAAASPDLPQPAER 302
++Q Q QQ + P G +G G AT+ P PAAASP L A
Sbjct: 7 LQQPSQPQQPPPTQQAVARRPPGGTSPPNGGL-PGPLATSAAPPGPPAAASPCLGPVAAA 65
Query: 303 SRGEPRPAEPRAPPRPPPAARPQ 325
G R AE P+PPP + Q
Sbjct: 66 GSGLRRGAEGILAPQPPPPQQHQ 88
Score = 30.0 bits (66), Expect = 3.2
Identities = 26/84 (30%), Positives = 34/84 (40%), Gaps = 8/84 (9%)
Query: 254 RGQQQLVEGAPDGVGHLHGSRGSGRAATTTRPQTTPAAASPDLPQPAERSRGE----PRP 309
RG L +P G G G + + + Q P + L P+ R GE P P
Sbjct: 382 RGPHHLDNSSPGPGSEARGING-GPSRMSPKAQR-PLRGAKTLSSPSNRPSGETSVPPPP 439
Query: 310 AEPRA-PPRPPPAARPQCPVQCEC 332
A R PPR P +A P P+ C
Sbjct: 440 AVGRMYPPRSPKSAAP-APISASC 462
>gi|27262651 ataxin 2 related protein isoform D [Homo sapiens]
Length = 1044
Score = 37.7 bits (86), Expect = 0.015
Identities = 28/83 (33%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Query: 243 VEQLQHRHQHERGQQQLVEGAPDGVGHLHGSRGSGRAATTTRPQTTPAAASPDLPQPAER 302
++Q Q QQ + P G +G G AT+ P PAAASP L A
Sbjct: 7 LQQPSQPQQPPPTQQAVARRPPGGTSPPNGGL-PGPLATSAAPPGPPAAASPCLGPVAAA 65
Query: 303 SRGEPRPAEPRAPPRPPPAARPQ 325
G R AE P+PPP + Q
Sbjct: 66 GSGLRRGAEGILAPQPPPPQQHQ 88
Score = 30.0 bits (66), Expect = 3.2
Identities = 26/84 (30%), Positives = 34/84 (40%), Gaps = 8/84 (9%)
Query: 254 RGQQQLVEGAPDGVGHLHGSRGSGRAATTTRPQTTPAAASPDLPQPAERSRGE----PRP 309
RG L +P G G G + + + Q P + L P+ R GE P P
Sbjct: 382 RGPHHLDNSSPGPGSEARGING-GPSRMSPKAQR-PLRGAKTLSSPSNRPSGETSVPPPP 439
Query: 310 AEPRA-PPRPPPAARPQCPVQCEC 332
A R PPR P +A P P+ C
Sbjct: 440 AVGRMYPPRSPKSAAP-APISASC 462
>gi|157168329 formin 1 [Homo sapiens]
Length = 1196
Score = 37.4 bits (85), Expect = 0.020
Identities = 18/52 (34%), Positives = 22/52 (42%)
Query: 276 SGRAATTTRPQTTPAAASPDLPQPAERSRGEPRPAEPRAPPRPPPAARPQCP 327
SG + + P P +A P LP P P P+ PP PPP P P
Sbjct: 660 SGLGSLSPAPPMPPVSAGPPLPPPPPPPPPLPPPSSAGPPPPPPPPPLPNSP 711
Score = 34.7 bits (78), Expect = 0.13
Identities = 20/53 (37%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Query: 8 GALRPRPSPHGVQGEKPAPIPPPPAQESNGASCGATPHNSLIPPPLLPHYPCP 60
G+L P P V P P PPPP S P PPP LP+ P P
Sbjct: 663 GSLSPAPPMPPVSAGPPLPPPPPPPPPLPPPSSAGPPPPP--PPPPLPNSPAP 713
Score = 31.2 bits (69), Expect = 1.4
Identities = 16/45 (35%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Query: 285 PQTTPAAASPDLPQPAERSRGEPRPAEPRAPP--RPPPAARPQCP 327
P P++A P P P P P P PP PPP P P
Sbjct: 689 PLPPPSSAGPPPPPPPPPLPNSPAPPNPGGPPPAPPPPGLAPPPP 733
Score = 28.9 bits (63), Expect = 7.2
Identities = 18/45 (40%), Positives = 19/45 (42%), Gaps = 5/45 (11%)
Query: 12 PRPSPHGVQGEKPAPIPPP----PAQESNGASCGATPHNSLIPPP 52
P P P G P P PPP PA + G A P L PPP
Sbjct: 689 PLPPPSSA-GPPPPPPPPPLPNSPAPPNPGGPPPAPPPPGLAPPP 732
Score = 28.5 bits (62), Expect = 9.4
Identities = 14/43 (32%), Positives = 16/43 (37%)
Query: 285 PQTTPAAASPDLPQPAERSRGEPRPAEPRAPPRPPPAARPQCP 327
P ++ P P P S P P P P PP A P P
Sbjct: 692 PPSSAGPPPPPPPPPLPNSPAPPNPGGPPPAPPPPGLAPPPPP 734
>gi|239741603 PREDICTED: hypothetical protein XP_002342247 [Homo
sapiens]
Length = 351
Score = 37.4 bits (85), Expect = 0.020
Identities = 17/39 (43%), Positives = 21/39 (53%)
Query: 288 TPAAASPDLPQPAERSRGEPRPAEPRAPPRPPPAARPQC 326
+P AA LP+ A R R PRPA PR P P + +C
Sbjct: 238 SPGAARSQLPETARRPRPRPRPALPRRAREPQPGSGRRC 276
>gi|145301567 hypothetical protein LOC56006 [Homo sapiens]
Length = 520
Score = 37.4 bits (85), Expect = 0.020
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Query: 274 RGSGRAATTTRPQTTPAAASPDLPQPAERSRGEPRPAEPRAPPRPPPAARP 324
R + +T+ Q TP S PAERS+ P P P APP P P +P
Sbjct: 50 RDASEETSTSVMQKTPIILSKP---PAERSKQPPPPTAPAAPPAPAPLEKP 97
>gi|46048439 N-acetyltransferase 6 [Homo sapiens]
Length = 308
Score = 37.4 bits (85), Expect = 0.020
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 5/65 (7%)
Query: 267 VGHLHGSRGSGRAATTTRPQTT-----PAAASPDLPQPAERSRGEPRPAEPRAPPRPPPA 321
+G+ G G T+ R T P A SP P+ A + P P+ PP PPP
Sbjct: 208 LGYQLGEPVQGLVFTSRRLPATLLNAFPTAPSPRPPRKAPNLTAQAAPRGPKGPPLPPPP 267
Query: 322 ARPQC 326
P+C
Sbjct: 268 PLPEC 272
>gi|183396804 Regulation of nuclear pre-mRNA domain containing 2 [Homo
sapiens]
Length = 1461
Score = 37.4 bits (85), Expect = 0.020
Identities = 32/98 (32%), Positives = 41/98 (41%), Gaps = 12/98 (12%)
Query: 6 ADGALRPRPSPH-GVQGEKPAPIPPPPAQESNGASCGATPHNSLIPPPLLPH-----YPC 59
A A P P H G+ P P PPPP + S+ G PPP + H +P
Sbjct: 1251 AHAAPPPPPGEHSGIPFPTPPP-PPPPGEHSSSGGSGVPFSTPPPPPPPVDHSGVVPFPA 1309
Query: 60 PLPYEHLADSVEAVLPK---ALVEGGHLASCHVEWLPG 94
P EH AV PK +L++G + H LPG
Sbjct: 1310 PPLAEHGVAGAVAVFPKDHSSLLQG--TLAEHFGVLPG 1345
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.137 0.437
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,204,280
Number of Sequences: 37866
Number of extensions: 1271493
Number of successful extensions: 19931
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 286
Number of HSP's successfully gapped in prelim test: 689
Number of HSP's that attempted gapping in prelim test: 13086
Number of HSP's gapped (non-prelim): 6423
length of query: 350
length of database: 18,247,518
effective HSP length: 103
effective length of query: 247
effective length of database: 14,347,320
effective search space: 3543788040
effective search space used: 3543788040
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.