LOC100293160 22405

Name: LOC100293160	Sequence: fasta or formatted (195aa)		NCBI GI: 239755466
Description: PREDICTED: similar to TRIMCyp		Referenced in: Peptidylprolyl Isomerases
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.2 16 4 C cysteine 2.6 5 1 D aspartate 4.1 8 1 E glutamate 7.2 14 1 F phenylalanine 7.7 15 2 G glycine 9.2 18 2 H histidine 3.6 7 2 I isoleucine 4.1 8 2 K lysine 9.7 19 2 L leucine 5.6 11 2 M methionine 2.6 5 1 N asparagine 4.6 9 1 P proline 3.1 6 1 Q glutamine 2.6 5 1 R arginine 2.6 5 1 S serine 8.2 16 2 T threonine 7.7 15 2 V valine 5.1 10 2 W tryptophan 1.0 2 1 Y tyrosine 0.5 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to TRIMCyp PPIA 0.543 peptidylprolyl isomerase A LOC643997 0.516 PREDICTED: similar to TRIMCyp isoform 2 LOC643997 0.516 PREDICTED: similar to TRIMCyp isoform 1 LOC643997 0.516 PREDICTED: similar to peptidylprolyl isomerase A is... LOC342541 0.508 PREDICTED: similar to TRIMCyp LOC342541 0.508 PREDICTED: similar to TRIMCyp LOC342541 0.508 PREDICTED: similar to TRIMCyp LOC390956 0.505 PREDICTED: similar to TRIM5/CypA fusion protein [Ho... LOC650157 0.505 PREDICTED: similar to TRIM5/CypA fusion protein [Ho... LOC650157 0.500 PREDICTED: similar to TRIM5/CypA fusion protein [Ho... LOC650157 0.500 PREDICTED: similar to TRIM5/CypA fusion protein [Ho... LOC643997 0.492 PREDICTED: similar to TRIMCyp isoform 1 LOC643997 0.492 PREDICTED: similar to TRIMCyp isoform 2 LOC643997 0.492 PREDICTED: similar to peptidylprolyl isomerase A iso... PPIAL4G 0.476 peptidylprolyl isomerase A (cyclophilin A)-like 4G ... LOC390956 0.476 PREDICTED: similar to TRIM5/cyclophilin A fusion pr... LOC390956 0.476 PREDICTED: similar to TRIM5/cyclophilin A fusion pr... LOC131055 0.476 PREDICTED: similar to TRIMCyp LOC131055 0.476 PREDICTED: similar to TRIMCyp LOC131055 0.476 PREDICTED: similar to TRIMCyp PPIAL4B 0.471 peptidylprolyl isomerase A (cyclophilin A)-like 4B ... PPIAL4A 0.471 peptidylprolyl isomerase A-like 4A PPIAL4C 0.471 peptidylprolyl isomerase A (cyclophilin A)-like 4C ... PPIAL4E 0.457 peptidylprolyl isomerase A (cyclophilin A)-like 4E ... LOC401859 0.452 PREDICTED: similar to TRIMCyp LOC401859 0.452 PREDICTED: similar to TRIMCyp LOC126170 0.439 PREDICTED: similar to TRIM5/CypA fusion protein [Ho... LOC126170 0.439 PREDICTED: similar to TRIM5/CypA fusion protein [Ho... LOC126170 0.439 PREDICTED: similar to TRIM5/CypA fusion protein [Ho... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.