LOC643997 21581

Name: LOC643997	Sequence: fasta or formatted (136aa)		NCBI GI: 239753360
Description: PREDICTED: similar to TRIMCyp isoform 2		Referenced in: Peptidylprolyl Isomerases
Other entries for this name: alt prot [165aa] PREDICTED: similar to TRIMCyp isoform 1 alt mRNA [136aa] PREDICTED: similar to peptidylprolyl isomerase A isoform 1 alt mRNA [136aa] PREDICTED: similar to TRIMCyp isoform 1 alt prot [165aa] PREDICTED: similar to peptidylprolyl isomerase A isoform 2 alt prot [165aa] PREDICTED: similar to TRIMCyp isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.7 5 1 C cysteine 3.7 5 2 D aspartate 3.7 5 1 E glutamate 7.4 10 1 F phenylalanine 10.3 14 2 G glycine 13.2 18 2 H histidine 5.1 7 2 I isoleucine 6.6 9 2 K lysine 9.6 13 2 L leucine 3.7 5 1 M methionine 2.9 4 1 N asparagine 4.4 6 1 P proline 2.9 4 1 Q glutamine 0.7 1 1 R arginine 2.2 3 1 S serine 5.9 8 1 T threonine 5.9 8 1 V valine 5.9 8 2 W tryptophan 0.7 1 1 Y tyrosine 1.5 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to TRIMCyp isoform 2 LOC643997 1.000 PREDICTED: similar to TRIMCyp isoform 1 LOC643997 1.000 PREDICTED: similar to peptidylprolyl isomerase A is... LOC643997 0.940 PREDICTED: similar to TRIMCyp isoform 1 LOC643997 0.940 PREDICTED: similar to TRIMCyp isoform 2 LOC643997 0.940 PREDICTED: similar to peptidylprolyl isomerase A iso... PPIA 0.790 peptidylprolyl isomerase A LOC100293160 0.727 PREDICTED: similar to TRIMCyp LOC131055 0.697 PREDICTED: similar to TRIMCyp LOC131055 0.697 PREDICTED: similar to TRIMCyp LOC131055 0.697 PREDICTED: similar to TRIMCyp LOC650157 0.697 PREDICTED: similar to TRIM5/CypA fusion protein [Ho... LOC342541 0.689 PREDICTED: similar to TRIMCyp LOC342541 0.689 PREDICTED: similar to TRIMCyp LOC342541 0.689 PREDICTED: similar to TRIMCyp LOC650157 0.689 PREDICTED: similar to TRIM5/CypA fusion protein [Ho... LOC650157 0.689 PREDICTED: similar to TRIM5/CypA fusion protein [Ho... LOC126170 0.685 PREDICTED: similar to TRIM5/CypA fusion protein [Ho... LOC126170 0.685 PREDICTED: similar to TRIM5/CypA fusion protein [Ho... LOC126170 0.685 PREDICTED: similar to TRIM5/CypA fusion protein [Ho... PPIAL4G 0.678 peptidylprolyl isomerase A (cyclophilin A)-like 4G ... PPIAL4B 0.670 peptidylprolyl isomerase A (cyclophilin A)-like 4B ... PPIAL4A 0.670 peptidylprolyl isomerase A-like 4A PPIAL4C 0.670 peptidylprolyl isomerase A (cyclophilin A)-like 4C ... LOC390956 0.663 PREDICTED: similar to TRIM5/CypA fusion protein [Ho... LOC390956 0.663 PREDICTED: similar to TRIM5/cyclophilin A fusion pr... LOC390956 0.663 PREDICTED: similar to TRIM5/cyclophilin A fusion pr... PPIAL4E 0.652 peptidylprolyl isomerase A (cyclophilin A)-like 4E ... LOC401859 0.652 PREDICTED: similar to TRIMCyp LOC401859 0.652 PREDICTED: similar to TRIMCyp Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.