LOC100293716 22363

Name: LOC100293716	Sequence: fasta or formatted (97aa)		NCBI GI: 239755367
Description: PREDICTED: similar to BMS1 homolog, ribosome assembly protein		Referenced in: Ribosomes
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.2 6 1 C cysteine 0.0 0 0 D aspartate 7.2 7 1 E glutamate 6.2 6 2 F phenylalanine 2.1 2 1 G glycine 3.1 3 1 H histidine 3.1 3 1 I isoleucine 2.1 2 1 K lysine 16.5 16 4 L leucine 7.2 7 1 M methionine 3.1 3 1 N asparagine 2.1 2 1 P proline 9.3 9 3 Q glutamine 7.2 7 1 R arginine 8.2 8 1 S serine 3.1 3 1 T threonine 4.1 4 1 V valine 8.2 8 4 W tryptophan 1.0 1 1 Y tyrosine 0.0 0 0			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to BMS1 homolog, ribosome assemb... LOC100288974 0.989 PREDICTED: hypothetical protein XP_002343044 BMS1 0.828 BMS1-like, ribosome assembly protein AKD1 0.057 adenylate kinase domain containing 1 isoform 1 [Hom... TSHZ1 0.046 teashirt family zinc finger 1 CHD4 0.046 chromodomain helicase DNA binding protein 4 RNF20 0.034 ring finger protein 20 IQCA1 0.034 IQ motif containing with AAA domain 1 CHD5 0.034 chromodomain helicase DNA binding protein 5 EIF5B 0.029 eukaryotic translation initiation factor 5B PCF11 0.029 pre-mRNA cleavage complex II protein Pcf11 AP3D1 0.029 adaptor-related protein complex 3, delta 1 subunit ... UPF2 0.029 UPF2 regulator of nonsense transcripts homolog [Homo... UPF2 0.029 UPF2 regulator of nonsense transcripts homolog [Homo... CIR1 0.029 CBF1 interacting corepressor NR4A2 0.023 nuclear receptor subfamily 4, group A, member 2 [Homo... KIAA1529 0.023 hypothetical protein LOC57653 TOP1 0.017 DNA topoisomerase I LOC100294088 0.017 PREDICTED: hypothetical protein, partial RDX 0.017 radixin RTF1 0.017 Paf1/RNA polymerase II complex component MAP1B 0.017 microtubule-associated protein 1B CCDC28A 0.017 coiled-coil domain containing 28A LOC100133599 0.017 PREDICTED: hypothetical protein RBBP6 0.017 retinoblastoma-binding protein 6 isoform 2 RBBP6 0.017 retinoblastoma-binding protein 6 isoform 1 PDCD11 0.017 programmed cell death 11 C4orf14 0.017 hypothetical protein LOC84273 ERCC3 0.017 excision repair cross-complementing rodent repair def... NTF3 0.017 neurotrophin 3 isoform 1 preproprotein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.