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Search of human proteins with 239755335
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239755335 PREDICTED: hypothetical protein [Homo sapiens]
(515 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239755335 PREDICTED: hypothetical protein [Homo sapiens] 1048 0.0
gi|239749833 PREDICTED: hypothetical protein XP_002347172 [Homo ... 617 e-177
gi|239744123 PREDICTED: hypothetical protein XP_002343065 [Homo ... 617 e-177
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 41 0.003
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 40 0.007
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 40 0.007
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 40 0.007
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 40 0.007
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 40 0.007
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 39 0.009
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 39 0.009
gi|157785645 SPEG complex locus [Homo sapiens] 36 0.074
gi|41406097 dishevelled 3 [Homo sapiens] 36 0.096
gi|239753242 PREDICTED: hypothetical protein XP_002345593 [Homo ... 35 0.13
gi|239747801 PREDICTED: hypothetical protein XP_002348317 [Homo ... 35 0.13
gi|239741675 PREDICTED: hypothetical protein XP_002342283 [Homo ... 35 0.13
gi|41281583 Histidine acid phosphatase domain containing 1 [Homo... 35 0.13
gi|37595528 polyhomeotic-like 2 isoform a [Homo sapiens] 35 0.13
gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens] 35 0.16
gi|239755949 PREDICTED: hypothetical protein [Homo sapiens] 35 0.21
gi|239750452 PREDICTED: hypothetical protein [Homo sapiens] 35 0.21
gi|133922582 zinc finger protein 358 [Homo sapiens] 35 0.21
gi|142976757 immediate early response 5 [Homo sapiens] 34 0.28
gi|239744754 PREDICTED: hypothetical protein XP_002343260 [Homo ... 34 0.28
gi|55953110 retinoblastoma protein-binding zinc finger protein i... 34 0.28
gi|20336260 retinoblastoma protein-binding zinc finger protein i... 34 0.28
gi|20336258 retinoblastoma protein-binding zinc finger protein i... 34 0.28
gi|151301215 widely-interspaced zinc finger motifs [Homo sapiens] 34 0.28
gi|56549696 E1A binding protein p400 [Homo sapiens] 34 0.37
gi|5454102 transforming, acidic coiled-coil containing protein 3... 34 0.37
>gi|239755335 PREDICTED: hypothetical protein [Homo sapiens]
Length = 515
Score = 1048 bits (2709), Expect = 0.0
Identities = 515/515 (100%), Positives = 515/515 (100%)
Query: 1 MASTSVMFSQIMRKARTSVAERLTPMAQCTSTRPCTLGNTEGSSDVSSNRQKVDTEVEEG 60
MASTSVMFSQIMRKARTSVAERLTPMAQCTSTRPCTLGNTEGSSDVSSNRQKVDTEVEEG
Sbjct: 1 MASTSVMFSQIMRKARTSVAERLTPMAQCTSTRPCTLGNTEGSSDVSSNRQKVDTEVEEG 60
Query: 61 VVVRLDAIVLQGHSTVEFGTCVHLELACSGIHNVGDSQLDQLALVPGCEEAGPDLIDMVQ 120
VVVRLDAIVLQGHSTVEFGTCVHLELACSGIHNVGDSQLDQLALVPGCEEAGPDLIDMVQ
Sbjct: 61 VVVRLDAIVLQGHSTVEFGTCVHLELACSGIHNVGDSQLDQLALVPGCEEAGPDLIDMVQ 120
Query: 121 CGSLTDPQQALQRSQCGRLVGRCLDCPMDLGPPEVLLLHLDFVGMKAPDGCGSQGTQEAP 180
CGSLTDPQQALQRSQCGRLVGRCLDCPMDLGPPEVLLLHLDFVGMKAPDGCGSQGTQEAP
Sbjct: 121 CGSLTDPQQALQRSQCGRLVGRCLDCPMDLGPPEVLLLHLDFVGMKAPDGCGSQGTQEAP 180
Query: 181 TNLSSSSQAPSPATSSTHPQTPVPSHFQGLGDQSLSPGNLGSLAKKPEGLAERGAHSHLW 240
TNLSSSSQAPSPATSSTHPQTPVPSHFQGLGDQSLSPGNLGSLAKKPEGLAERGAHSHLW
Sbjct: 181 TNLSSSSQAPSPATSSTHPQTPVPSHFQGLGDQSLSPGNLGSLAKKPEGLAERGAHSHLW 240
Query: 241 RLKTVAERGCRRQEEPDGVAGSRADPTLGFHHLLCVRLGQSLQQHQQDQCQGGKVAEPHG 300
RLKTVAERGCRRQEEPDGVAGSRADPTLGFHHLLCVRLGQSLQQHQQDQCQGGKVAEPHG
Sbjct: 241 RLKTVAERGCRRQEEPDGVAGSRADPTLGFHHLLCVRLGQSLQQHQQDQCQGGKVAEPHG 300
Query: 301 RDLGPHLASSGQPHPALPPEASPGPSALAGTPQLLVQPAELVQEASVGEDPSVLPHGDHR 360
RDLGPHLASSGQPHPALPPEASPGPSALAGTPQLLVQPAELVQEASVGEDPSVLPHGDHR
Sbjct: 301 RDLGPHLASSGQPHPALPPEASPGPSALAGTPQLLVQPAELVQEASVGEDPSVLPHGDHR 360
Query: 361 LAQGQPLVQHEVAHTAAVEVRAALTVEALVGGVQHVATKNCLSTSPPPCPLASYHSRISY 420
LAQGQPLVQHEVAHTAAVEVRAALTVEALVGGVQHVATKNCLSTSPPPCPLASYHSRISY
Sbjct: 361 LAQGQPLVQHEVAHTAAVEVRAALTVEALVGGVQHVATKNCLSTSPPPCPLASYHSRISY 420
Query: 421 EKVGPNFVHTAARRLPCPQELLQLQDAGARRGFVLSPQLWERGPAPAPLAPLPPVALASG 480
EKVGPNFVHTAARRLPCPQELLQLQDAGARRGFVLSPQLWERGPAPAPLAPLPPVALASG
Sbjct: 421 EKVGPNFVHTAARRLPCPQELLQLQDAGARRGFVLSPQLWERGPAPAPLAPLPPVALASG 480
Query: 481 MTHAPSGSSAAASRFSSRAHLEPRVFSSVGPAPCR 515
MTHAPSGSSAAASRFSSRAHLEPRVFSSVGPAPCR
Sbjct: 481 MTHAPSGSSAAASRFSSRAHLEPRVFSSVGPAPCR 515
>gi|239749833 PREDICTED: hypothetical protein XP_002347172 [Homo
sapiens]
Length = 302
Score = 617 bits (1591), Expect = e-177
Identities = 301/302 (99%), Positives = 302/302 (100%)
Query: 1 MASTSVMFSQIMRKARTSVAERLTPMAQCTSTRPCTLGNTEGSSDVSSNRQKVDTEVEEG 60
MASTSVMFSQIMRKARTSVAERLTPMAQCTSTRPCTLGNTEGSSDVSSNRQKVDTEVEEG
Sbjct: 1 MASTSVMFSQIMRKARTSVAERLTPMAQCTSTRPCTLGNTEGSSDVSSNRQKVDTEVEEG 60
Query: 61 VVVRLDAIVLQGHSTVEFGTCVHLELACSGIHNVGDSQLDQLALVPGCEEAGPDLIDMVQ 120
VVVRLDAIVLQGHSTVEFGTCVHLELACSGIHNVGDSQLDQLALVPGCEEAGPDLIDMVQ
Sbjct: 61 VVVRLDAIVLQGHSTVEFGTCVHLELACSGIHNVGDSQLDQLALVPGCEEAGPDLIDMVQ 120
Query: 121 CGSLTDPQQALQRSQCGRLVGRCLDCPMDLGPPEVLLLHLDFVGMKAPDGCGSQGTQEAP 180
CGSLTDPQQALQRSQCGRLVGRCLDCPMDLGPPEVLLLHLDFVGMKAPDGCGSQGTQEAP
Sbjct: 121 CGSLTDPQQALQRSQCGRLVGRCLDCPMDLGPPEVLLLHLDFVGMKAPDGCGSQGTQEAP 180
Query: 181 TNLSSSSQAPSPATSSTHPQTPVPSHFQGLGDQSLSPGNLGSLAKKPEGLAERGAHSHLW 240
TNLSSSSQAPSPATSSTHPQTPVPSHFQGLGDQSLSPGNLGSLAKKPEGLAERGAHSHLW
Sbjct: 181 TNLSSSSQAPSPATSSTHPQTPVPSHFQGLGDQSLSPGNLGSLAKKPEGLAERGAHSHLW 240
Query: 241 RLKTVAERGCRRQEEPDGVAGSRADPTLGFHHLLCVRLGQSLQQHQQDQCQGGKVAEPHG 300
RLKTVAERGCRRQEEPDGVAGSRADPTLGFHHLLCVRLGQSLQQHQQDQCQGGKVAEPHG
Sbjct: 241 RLKTVAERGCRRQEEPDGVAGSRADPTLGFHHLLCVRLGQSLQQHQQDQCQGGKVAEPHG 300
Query: 301 RD 302
R+
Sbjct: 301 RE 302
>gi|239744123 PREDICTED: hypothetical protein XP_002343065 [Homo
sapiens]
Length = 302
Score = 617 bits (1591), Expect = e-177
Identities = 301/302 (99%), Positives = 302/302 (100%)
Query: 1 MASTSVMFSQIMRKARTSVAERLTPMAQCTSTRPCTLGNTEGSSDVSSNRQKVDTEVEEG 60
MASTSVMFSQIMRKARTSVAERLTPMAQCTSTRPCTLGNTEGSSDVSSNRQKVDTEVEEG
Sbjct: 1 MASTSVMFSQIMRKARTSVAERLTPMAQCTSTRPCTLGNTEGSSDVSSNRQKVDTEVEEG 60
Query: 61 VVVRLDAIVLQGHSTVEFGTCVHLELACSGIHNVGDSQLDQLALVPGCEEAGPDLIDMVQ 120
VVVRLDAIVLQGHSTVEFGTCVHLELACSGIHNVGDSQLDQLALVPGCEEAGPDLIDMVQ
Sbjct: 61 VVVRLDAIVLQGHSTVEFGTCVHLELACSGIHNVGDSQLDQLALVPGCEEAGPDLIDMVQ 120
Query: 121 CGSLTDPQQALQRSQCGRLVGRCLDCPMDLGPPEVLLLHLDFVGMKAPDGCGSQGTQEAP 180
CGSLTDPQQALQRSQCGRLVGRCLDCPMDLGPPEVLLLHLDFVGMKAPDGCGSQGTQEAP
Sbjct: 121 CGSLTDPQQALQRSQCGRLVGRCLDCPMDLGPPEVLLLHLDFVGMKAPDGCGSQGTQEAP 180
Query: 181 TNLSSSSQAPSPATSSTHPQTPVPSHFQGLGDQSLSPGNLGSLAKKPEGLAERGAHSHLW 240
TNLSSSSQAPSPATSSTHPQTPVPSHFQGLGDQSLSPGNLGSLAKKPEGLAERGAHSHLW
Sbjct: 181 TNLSSSSQAPSPATSSTHPQTPVPSHFQGLGDQSLSPGNLGSLAKKPEGLAERGAHSHLW 240
Query: 241 RLKTVAERGCRRQEEPDGVAGSRADPTLGFHHLLCVRLGQSLQQHQQDQCQGGKVAEPHG 300
RLKTVAERGCRRQEEPDGVAGSRADPTLGFHHLLCVRLGQSLQQHQQDQCQGGKVAEPHG
Sbjct: 241 RLKTVAERGCRRQEEPDGVAGSRADPTLGFHHLLCVRLGQSLQQHQQDQCQGGKVAEPHG 300
Query: 301 RD 302
R+
Sbjct: 301 RE 302
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 40.8 bits (94), Expect = 0.003
Identities = 54/193 (27%), Positives = 72/193 (37%), Gaps = 32/193 (16%)
Query: 312 QPHPALPPE-ASPGPSALAGTPQLLVQPAELVQEASVGEDPSVLPHGDHRLAQGQPLVQH 370
+P P PP A+P AL P A AS+ P P PL+Q
Sbjct: 783 KPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQV 842
Query: 371 EVAHTAAVEVRAALTV-----EALVGGVQHVATKNCLSTSPPPCPLASYHSRISYEKVGP 425
+ A+ ++A + V G + L+ PPP P S S +S GP
Sbjct: 843 PPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLA---LAPGPPPPPSRSPSSTLS----GP 895
Query: 426 NFVHTAARRLPCPQELLQLQDAGARRGFVLSPQ-----------LWERGPAP------AP 468
+ ++ P+EL + D+G G SP W RGPAP AP
Sbjct: 896 DLAGHSSSATSTPEEL-RGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAP 954
Query: 469 LAPLP-PVALASG 480
APLP P A G
Sbjct: 955 GAPLPWPPATGPG 967
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 39.7 bits (91), Expect = 0.007
Identities = 64/275 (23%), Positives = 99/275 (36%), Gaps = 57/275 (20%)
Query: 174 QGTQEAPTNLSSSSQAPSPATSSTHPQTPVPSHFQGLGDQSLSPGN-LGSLAKKPEGLAE 232
Q Q+ + + + S + SP + P +P H GL PG G L P G+A
Sbjct: 3607 QQQQQQHSAVLALSPSQSPRLLTKLPGQLLPGH--GLQPPQGPPGGQAGGLRLTPGGMAL 3664
Query: 233 RGAHSHLWRLKTVAERGCRRQEEPDGVAGSRADPTLGF---------------------- 270
G + +A++ +Q++ G AGS A P+ GF
Sbjct: 3665 PGQPGGPFLNTALAQQ---QQQQHSGGAGSLAGPSGGFFPGNLALRSLGPDSRLLQERQL 3721
Query: 271 -----HHLLCVRLGQSLQQHQQDQCQGGKVAEPHGRDLGP----HLASSGQPHPALPPEA 321
L +L Q QQ QQ Q G+VA + GP + A +P +PP +
Sbjct: 3722 QLQQQRMQLAQKLQQQQQQQQQQQHLLGQVAIQQQQQQGPGVQTNQALGPKPQGLMPPSS 3781
Query: 322 SPGPSALAGTPQLLVQPAELVQEASVG----EDPSVL-PHGDHR---------------L 361
G +PQ P ++ A V + P L P G HR
Sbjct: 3782 HQGLLVQQLSPQPPQGPQGMLGPAQVAVLQQQHPGALGPQGPHRQVLMTQSRVLSSPQLA 3841
Query: 362 AQGQPLVQHEVAHTAAVEVRAALTVEALVGGVQHV 396
QGQ L+ H + + + + + G+ H+
Sbjct: 3842 QQGQGLMGHRLVTAQQQQQQQQHQQQGSMAGLSHL 3876
Score = 36.2 bits (82), Expect = 0.074
Identities = 52/182 (28%), Positives = 70/182 (38%), Gaps = 15/182 (8%)
Query: 301 RDLGPHLA-SSGQPHPALPPEASPGPSALAGTPQLLVQPAELVQEASVGEDPSVLP--HG 357
R GPHL+ +PH + PE P S A P L QP E +V E+P + P G
Sbjct: 737 RSEGPHLSPRPEEPHLSPRPE-EPHLSPQAEEPHLSPQPEEPCL-CAVPEEPHLSPQAEG 794
Query: 358 DHRLAQGQPL---VQHEVAHTAAVEVRAALTVEALVGGVQHVATKNCLSTSPPPCPLASY 414
H Q + L Q E H + V L+ + + + + CLS P L+
Sbjct: 795 PHLSPQPEELHLSPQTEEPHLSPVPEEPCLSPQPEESHLSPQSEEPCLSPRPEESHLSPE 854
Query: 415 HSRISYEKVGPNFVHTAARRLPCPQELLQLQDAGARRGFVLSPQLWERG---PAPAPLAP 471
+ P + P P+EL G LSP L E P PL+P
Sbjct: 855 LEKPPLSP-RPEKPPEEPGQCPAPEELPLFPPPGEPS---LSPLLGEPALSEPGEPPLSP 910
Query: 472 LP 473
LP
Sbjct: 911 LP 912
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 39.7 bits (91), Expect = 0.007
Identities = 61/213 (28%), Positives = 84/213 (39%), Gaps = 36/213 (16%)
Query: 305 PHLASSGQPHPALPPEASPGPSALAGTPQLLVQPAELVQEASVGEDPSVLPHGDHRLAQG 364
P LASS P P + P ++PG S + +P P L ++ P+ +P
Sbjct: 1620 PVLASSQTPVPVMAPSSTPGTSLASASPVPAPTPV-LAPSSTQTMLPAPVP--------- 1669
Query: 365 QPLVQHEVAHTAAVEVRAALTVEALVGGVQHVATKNCLSTSPPPCPLASYHSRISYEKVG 424
PL T A+ A T +GG T + L T P P + ++
Sbjct: 1670 SPLPSPASTQTLALAPALAPT----LGGSSPSQTLS-LGTGNPQGPFPTQTLSLT----- 1719
Query: 425 PNFVHTAARRLPCPQELLQLQDAGARRGFVLSP-QLWERGPAPAPLAPLPPV--ALASGM 481
A+ +P P + L L G L P Q PAP PLAP PV A A +
Sbjct: 1720 -----PASSLVPTPAQTLSLAP-----GPPLGPTQTLSLAPAP-PLAPASPVGPAPAHTL 1768
Query: 482 THAPSGSSAA--ASRFSSRAHLEPRVFSSVGPA 512
T AP+ SSA+ A L P ++GPA
Sbjct: 1769 TLAPASSSASLLAPASVQTLTLSPAPVPTLGPA 1801
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 39.7 bits (91), Expect = 0.007
Identities = 80/352 (22%), Positives = 116/352 (32%), Gaps = 53/352 (15%)
Query: 178 EAPTNLSSSSQAPSPATSSTHPQTPVPSHF----QGLGDQSLSPGNLGSLAKKPEGLAER 233
+APT ++ + + P T P PS QG S +P +P+
Sbjct: 188 QAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPN-------QPQAPTAP 240
Query: 234 GAHSHLWRLKTVAERGCRRQEEPDGVAGSRADPTLGFHHLLCVRLGQ-SLQQHQQDQCQG 292
H+H+ + + + R P P L L GQ S H Q G
Sbjct: 241 VPHTHIQQAPALHPQ---RPPSPHPPPHPSPHPPL---QPLTGSAGQPSAPSHAQPPLHG 294
Query: 293 GKVAEPHGRDLGPHLASSGQPHP-ALPPEASPGPSALAGTP--------------QLLVQ 337
PH GP L G P P LPP+AS G + L +P Q +Q
Sbjct: 295 QGPPGPHSLQAGPLLQHPGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQ 354
Query: 338 PAELVQEASVGEDPSVLPHGDHRLAQGQPLVQHEVAH--------TAAVEVRAALTVEAL 389
+ +E + P +PH P + AH + + A L
Sbjct: 355 SQQPPREQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPA 414
Query: 390 VGGVQHVATKNCLSTSPPPCPLASYHSRISYEKVGPNFVHTAARRLPCP---QELLQLQD 446
+ + ++T + S PPP L + P + T ++ LP P L
Sbjct: 415 LKPLSSLSTHHPPSAHPPPLQLMPQSQPLPSSPAQPPGL-TQSQNLPPPPASHPPTGLHQ 473
Query: 447 AGARRGFVLSPQLWERGPAP-----APLAPLPPVALASGMTHAPSGSSAAAS 493
+ F P + GP P P PP G + P S AAAS
Sbjct: 474 VAPQPPFAQHPFV-PGGPPPITPPTCPSTSTPPA--GPGTSAQPPCSGAAAS 522
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 39.7 bits (91), Expect = 0.007
Identities = 80/352 (22%), Positives = 116/352 (32%), Gaps = 53/352 (15%)
Query: 178 EAPTNLSSSSQAPSPATSSTHPQTPVPSHF----QGLGDQSLSPGNLGSLAKKPEGLAER 233
+APT ++ + + P T P PS QG S +P +P+
Sbjct: 742 QAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPN-------QPQAPTAP 794
Query: 234 GAHSHLWRLKTVAERGCRRQEEPDGVAGSRADPTLGFHHLLCVRLGQ-SLQQHQQDQCQG 292
H+H+ + + + R P P L L GQ S H Q G
Sbjct: 795 VPHTHIQQAPALHPQ---RPPSPHPPPHPSPHPPL---QPLTGSAGQPSAPSHAQPPLHG 848
Query: 293 GKVAEPHGRDLGPHLASSGQPHP-ALPPEASPGPSALAGTP--------------QLLVQ 337
PH GP L G P P LPP+AS G + L +P Q +Q
Sbjct: 849 QGPPGPHSLQAGPLLQHPGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQ 908
Query: 338 PAELVQEASVGEDPSVLPHGDHRLAQGQPLVQHEVAH--------TAAVEVRAALTVEAL 389
+ +E + P +PH P + AH + + A L
Sbjct: 909 SQQPPREQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPA 968
Query: 390 VGGVQHVATKNCLSTSPPPCPLASYHSRISYEKVGPNFVHTAARRLPCP---QELLQLQD 446
+ + ++T + S PPP L + P + T ++ LP P L
Sbjct: 969 LKPLSSLSTHHPPSAHPPPLQLMPQSQPLPSSPAQPPGL-TQSQNLPPPPASHPPTGLHQ 1027
Query: 447 AGARRGFVLSPQLWERGPAP-----APLAPLPPVALASGMTHAPSGSSAAAS 493
+ F P + GP P P PP G + P S AAAS
Sbjct: 1028 VAPQPPFAQHPFV-PGGPPPITPPTCPSTSTPPA--GPGTSAQPPCSGAAAS 1076
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 39.7 bits (91), Expect = 0.007
Identities = 80/352 (22%), Positives = 116/352 (32%), Gaps = 53/352 (15%)
Query: 178 EAPTNLSSSSQAPSPATSSTHPQTPVPSHF----QGLGDQSLSPGNLGSLAKKPEGLAER 233
+APT ++ + + P T P PS QG S +P +P+
Sbjct: 742 QAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPN-------QPQAPTAP 794
Query: 234 GAHSHLWRLKTVAERGCRRQEEPDGVAGSRADPTLGFHHLLCVRLGQ-SLQQHQQDQCQG 292
H+H+ + + + R P P L L GQ S H Q G
Sbjct: 795 VPHTHIQQAPALHPQ---RPPSPHPPPHPSPHPPL---QPLTGSAGQPSAPSHAQPPLHG 848
Query: 293 GKVAEPHGRDLGPHLASSGQPHP-ALPPEASPGPSALAGTP--------------QLLVQ 337
PH GP L G P P LPP+AS G + L +P Q +Q
Sbjct: 849 QGPPGPHSLQAGPLLQHPGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQ 908
Query: 338 PAELVQEASVGEDPSVLPHGDHRLAQGQPLVQHEVAH--------TAAVEVRAALTVEAL 389
+ +E + P +PH P + AH + + A L
Sbjct: 909 SQQPPREQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPA 968
Query: 390 VGGVQHVATKNCLSTSPPPCPLASYHSRISYEKVGPNFVHTAARRLPCP---QELLQLQD 446
+ + ++T + S PPP L + P + T ++ LP P L
Sbjct: 969 LKPLSSLSTHHPPSAHPPPLQLMPQSQPLPSSPAQPPGL-TQSQNLPPPPASHPPTGLHQ 1027
Query: 447 AGARRGFVLSPQLWERGPAP-----APLAPLPPVALASGMTHAPSGSSAAAS 493
+ F P + GP P P PP G + P S AAAS
Sbjct: 1028 VAPQPPFAQHPFV-PGGPPPITPPTCPSTSTPPA--GPGTSAQPPCSGAAAS 1076
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 39.3 bits (90), Expect = 0.009
Identities = 59/225 (26%), Positives = 78/225 (34%), Gaps = 50/225 (22%)
Query: 298 PHGRDLGPHLASSGQPHPALPPEASPGPSALA----------GTPQLLVQP--------- 338
P P ++ S P P PP + P LA TP L P
Sbjct: 482 PPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQ 541
Query: 339 AELVQEASVGEDPSVLPHGDHRLAQGQPLVQHEVAHTAAVEVRAALT-----VEALVGGV 393
A AS+ P P PL+Q + A+ ++A + V G
Sbjct: 542 APFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGP 601
Query: 394 QHVATKNCLSTSPPPCPLASYHSRISYEKVGPNFVHTAARRLPCPQELLQLQDAGARRGF 453
+ L+ PPP P S S +S GP+ ++ P+E L+ D+G G
Sbjct: 602 RLTL---ALAPGPPPPPSRSPSSTLS----GPDLAGHSSSATSTPEE-LRGYDSGPEGGA 653
Query: 454 VLS-----------PQLWERGPAP------APLAPLP-PVALASG 480
S P W RGPAP AP APLP P A G
Sbjct: 654 AASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPG 698
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 39.3 bits (90), Expect = 0.009
Identities = 59/225 (26%), Positives = 78/225 (34%), Gaps = 50/225 (22%)
Query: 298 PHGRDLGPHLASSGQPHPALPPEASPGPSALA----------GTPQLLVQP--------- 338
P P ++ S P P PP + P LA TP L P
Sbjct: 443 PPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQ 502
Query: 339 AELVQEASVGEDPSVLPHGDHRLAQGQPLVQHEVAHTAAVEVRAALT-----VEALVGGV 393
A AS+ P P PL+Q + A+ ++A + V G
Sbjct: 503 APFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGP 562
Query: 394 QHVATKNCLSTSPPPCPLASYHSRISYEKVGPNFVHTAARRLPCPQELLQLQDAGARRGF 453
+ L+ PPP P S S +S GP+ ++ P+E L+ D+G G
Sbjct: 563 RLTL---ALAPGPPPPPSRSPSSTLS----GPDLAGHSSSATSTPEE-LRGYDSGPEGGA 614
Query: 454 VLS-----------PQLWERGPAP------APLAPLP-PVALASG 480
S P W RGPAP AP APLP P A G
Sbjct: 615 AASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPG 659
>gi|157785645 SPEG complex locus [Homo sapiens]
Length = 3267
Score = 36.2 bits (82), Expect = 0.074
Identities = 54/216 (25%), Positives = 75/216 (34%), Gaps = 39/216 (18%)
Query: 279 GQSLQQHQQDQCQGGKVAEPHGRDLGPHLASSGQPHPALPPEAS----PGPSALAGTPQL 334
G++L H G + EP DL P LAS PA PP + P PS G
Sbjct: 265 GRALSIHVSVPQSGLRREEP---DLQPQLASEAPRRPAQPPPSKSALLPPPSPRVGKRSP 321
Query: 335 LVQPAELVQEASVGEDPSVLPHGDHRLAQGQPLVQHEVAHTAAVEVRAALTVEALVGGVQ 394
PA+ P+ P HR Q +P++ + ++ + +L G +
Sbjct: 322 PGPPAQ----------PAATPTSPHRRTQ-EPVLPEDTTTEEKRGKKSKSSGPSLAGTAE 370
Query: 395 HVATKNCLSTSPPPCPLASYHSRISYEKVGPNFVHTAARRLPCPQELLQLQDAGARRGFV 454
S P PL+ R+S P V +R L +LQ RR
Sbjct: 371 ----------SRPQTPLSEASGRLSALGRSPRLVRAGSRILD------KLQFFEERR--- 411
Query: 455 LSPQLWERGPAPAPLAPLPPVALASGMTHAPSGSSA 490
L PAPL P P+ A + S A
Sbjct: 412 --RSLERSDSPPAPLRPWVPLRKARSLEQPKSERGA 445
>gi|41406097 dishevelled 3 [Homo sapiens]
Length = 716
Score = 35.8 bits (81), Expect = 0.096
Identities = 47/197 (23%), Positives = 66/197 (33%), Gaps = 27/197 (13%)
Query: 179 APTNLSSSSQAPSPATSSTHPQTPVPSHFQGLGDQSLSPGNLGSLAKKPEGLAERGAHSH 238
AP ++ Q P P HP P P G + S G + ++ EG G++
Sbjct: 530 APWPMAFPYQYPPPP----HPYNPHP----GFPELGYSYGGGSASSQHSEGSRSSGSN-- 579
Query: 239 LWRLKTVAERGCRRQEEPDGVAGSRADPTLGFHHLLCVRLGQSLQQHQQDQCQGGKVAEP 298
G R++E D AG G R + + + G A
Sbjct: 580 --------RSGSDRRKEKDPKAGDSKSGGSGSESDHTTRSSLRGPRERAPSERSGPAASE 631
Query: 299 HGRDLGPHLASSGQPHPALPPEASPGPSALAGTPQLLVQPAELVQ---EASVGEDPSVLP 355
H LASS + H P PG L G P L++ P A G D + +P
Sbjct: 632 HSHRSHHSLASSLRSHHTHPSYGPPGVPPLYGPPMLMMPPPPAAMGPPGAPPGRDLASVP 691
Query: 356 ------HGDHRLAQGQP 366
R+A G P
Sbjct: 692 PELTASRQSFRMAMGNP 708
>gi|239753242 PREDICTED: hypothetical protein XP_002345593 [Homo
sapiens]
Length = 115
Score = 35.4 bits (80), Expect = 0.13
Identities = 28/87 (32%), Positives = 39/87 (44%)
Query: 2 ASTSVMFSQIMRKARTSVAERLTPMAQCTSTRPCTLGNTEGSSDVSSNRQKVDTEVEEGV 61
AS+S MR AR VAER P QCTSTRP ++ + + T++ V
Sbjct: 19 ASSSRTRRLCMRYARQMVAEREIPAWQCTSTRPPLFFTQCPLTNEAYGLLEPGTDLHHLV 78
Query: 62 VVRLDAIVLQGHSTVEFGTCVHLELAC 88
V+ D +V + V H+E C
Sbjct: 79 VLHRDTLVAEKALKVVGAAGGHVEDGC 105
>gi|239747801 PREDICTED: hypothetical protein XP_002348317 [Homo
sapiens]
Length = 115
Score = 35.4 bits (80), Expect = 0.13
Identities = 28/87 (32%), Positives = 39/87 (44%)
Query: 2 ASTSVMFSQIMRKARTSVAERLTPMAQCTSTRPCTLGNTEGSSDVSSNRQKVDTEVEEGV 61
AS+S MR AR VAER P QCTSTRP ++ + + T++ V
Sbjct: 19 ASSSRTRRLCMRYARQMVAEREIPAWQCTSTRPPLFFTQCPLTNEAYGLLEPGTDLHHLV 78
Query: 62 VVRLDAIVLQGHSTVEFGTCVHLELAC 88
V+ D +V + V H+E C
Sbjct: 79 VLHRDTLVAEKALKVVGAAGGHVEDGC 105
>gi|239741675 PREDICTED: hypothetical protein XP_002342283 [Homo
sapiens]
Length = 115
Score = 35.4 bits (80), Expect = 0.13
Identities = 28/87 (32%), Positives = 39/87 (44%)
Query: 2 ASTSVMFSQIMRKARTSVAERLTPMAQCTSTRPCTLGNTEGSSDVSSNRQKVDTEVEEGV 61
AS+S MR AR VAER P QCTSTRP ++ + + T++ V
Sbjct: 19 ASSSRTRRLCMRYARQMVAEREIPAWQCTSTRPPLFFTQCPLTNEAYGLLEPGTDLHHLV 78
Query: 62 VVRLDAIVLQGHSTVEFGTCVHLELAC 88
V+ D +V + V H+E C
Sbjct: 79 VLHRDTLVAEKALKVVGAAGGHVEDGC 105
>gi|41281583 Histidine acid phosphatase domain containing 1 [Homo
sapiens]
Length = 1222
Score = 35.4 bits (80), Expect = 0.13
Identities = 25/100 (25%), Positives = 40/100 (40%), Gaps = 4/100 (4%)
Query: 403 STSPPPCPLASYHSRISYEKVGPNFVHTAARRLPCPQELLQLQDAGARRGFVLSPQLWER 462
S P CPL + H+ +S ++V A+ P++ ++ R ++ ++
Sbjct: 1102 SMVPSICPLETLHNALSLKQVDEFLASIASPSSDVPRKTAEISSTALRSSPIMRKKVSLN 1161
Query: 463 GPAPAPLAPLPPVAL----ASGMTHAPSGSSAAASRFSSR 498
PA + P PP L AS SSA SSR
Sbjct: 1162 TYTPAKILPTPPATLKSTKASSKPATSGPSSAVVPNTSSR 1201
>gi|37595528 polyhomeotic-like 2 isoform a [Homo sapiens]
Length = 858
Score = 35.4 bits (80), Expect = 0.13
Identities = 51/215 (23%), Positives = 73/215 (33%), Gaps = 46/215 (21%)
Query: 170 GCGSQGTQEAPTNLSS----SSQAPSPATSSTHPQTPV---------PSHFQGLGD--QS 214
G GS P + + + Q P+ A S P PV P Q L QS
Sbjct: 209 GTGSPARPPTPAQVQNLTLRTQQTPAAAASGPTPTQPVLPSLALKPTPGGSQPLPTPAQS 268
Query: 215 LSPGNLGSLAKKPEGLAERGAHSHLWRLKTVAERGCRRQEEPDGVAG----SRADPTLGF 270
+ KP G+A+ H ++G P + G SR P +
Sbjct: 269 RNTAQASPAGAKP-GIADSVMEPH--------KKGDGNSSVPGSMEGRAGLSRTVPAVAA 319
Query: 271 HHLLCVRLGQSLQQHQQDQCQGGKVAEPHGRDLGPHLASSGQPHPAL---PPE------- 320
H L+ Q LQ HQ + +P + L P QP P PP+
Sbjct: 320 HPLIAPAYAQ-LQPHQL-------LPQPSSKHLQPQFVIQQQPQPQQQQPPPQQSRPVLQ 371
Query: 321 ASPGPSALAGTPQLLVQPAELVQEASVGEDPSVLP 355
A P P + +P + +QP+ +G LP
Sbjct: 372 AEPHPQLASVSPSVALQPSSEAHAMPLGPVTPALP 406
>gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens]
Length = 663
Score = 35.0 bits (79), Expect = 0.16
Identities = 35/142 (24%), Positives = 52/142 (36%), Gaps = 5/142 (3%)
Query: 372 VAHTAAVEVRAALTVEALVGGVQHVATKNCLSTSPPPCPLASY-HSRISYEKVGPNFVHT 430
VAH ++ A V G +H+A + L SPP ++ + + + H
Sbjct: 72 VAHLRLRDLGADPGVATTPLGPEHMAQASTLGLSPPSQAFPAHPEAPAAAARAAALVAHP 131
Query: 431 AARRLPCPQELLQLQDAGARRGFVLSPQLWERGPAPAPLAPLPPVALASGMTHAPSGSSA 490
A PC Q + P P+P P P PP SG T SG
Sbjct: 132 GAGSYPCGGGSSGAQPSAPPPPAPPLPPT----PSPPPPPPPPPPPALSGYTTTNSGGGG 187
Query: 491 AASRFSSRAHLEPRVFSSVGPA 512
++ + SR + R S+ PA
Sbjct: 188 SSGKGHSRDFVLRRDLSATAPA 209
>gi|239755949 PREDICTED: hypothetical protein [Homo sapiens]
Length = 524
Score = 34.7 bits (78), Expect = 0.21
Identities = 45/170 (26%), Positives = 76/170 (44%), Gaps = 12/170 (7%)
Query: 172 GSQGTQEAPTNLSSSSQAPSPATSSTHPQTPVPSHFQ-GLGDQSLSPG-NLGSL-AKKPE 228
G + T + + SS+S + P+TSST+ ++ +HF G GD+ L G L ++ A+ PE
Sbjct: 152 GPEMTDSSDSPDSSTSDSRDPSTSSTYIKSKSKNHFYVGGGDRFLLVGCTLTAIEAEPPE 211
Query: 229 GLAERGAHSHLWRLKTVAERGCRRQEEPDGVAGSRADPTLGFHHLLCVRLGQSLQQHQQD 288
+ G H + + AE G + + V G + H V G H
Sbjct: 212 EMLLIGRHGDVVQ---HAELG-QAVDGEAAVVGHQGQWVSLQHQESQVSEGPQAGDHALQ 267
Query: 289 QCQGGKVAEPHGRDLGPHLASSGQPHPALPPEASPGPSALAGTPQLLVQP 338
CQ + A+ G ++GP ++ + +P P++L G P L +P
Sbjct: 268 VCQVVE-AQVQGDEVGPGSTAT----LTVGVTETPPPTSLHGAPLFLAKP 312
>gi|239750452 PREDICTED: hypothetical protein [Homo sapiens]
Length = 524
Score = 34.7 bits (78), Expect = 0.21
Identities = 45/170 (26%), Positives = 76/170 (44%), Gaps = 12/170 (7%)
Query: 172 GSQGTQEAPTNLSSSSQAPSPATSSTHPQTPVPSHFQ-GLGDQSLSPG-NLGSL-AKKPE 228
G + T + + SS+S + P+TSST+ ++ +HF G GD+ L G L ++ A+ PE
Sbjct: 152 GPEMTDSSDSPDSSTSDSRDPSTSSTYIKSKSKNHFYVGGGDRFLLVGCTLTAIEAEPPE 211
Query: 229 GLAERGAHSHLWRLKTVAERGCRRQEEPDGVAGSRADPTLGFHHLLCVRLGQSLQQHQQD 288
+ G H + + AE G + + V G + H V G H
Sbjct: 212 EMLLIGRHGDVVQ---HAELG-QAVDGEAAVVGHQGQWVSLQHQESQVSEGPQAGDHALQ 267
Query: 289 QCQGGKVAEPHGRDLGPHLASSGQPHPALPPEASPGPSALAGTPQLLVQP 338
CQ + A+ G ++GP ++ + +P P++L G P L +P
Sbjct: 268 VCQVVE-AQVQGDEVGPGSTAT----LTVGVTETPPPTSLHGAPLFLAKP 312
>gi|133922582 zinc finger protein 358 [Homo sapiens]
Length = 568
Score = 34.7 bits (78), Expect = 0.21
Identities = 53/214 (24%), Positives = 72/214 (33%), Gaps = 14/214 (6%)
Query: 299 HGRDLGPHLASSGQPHPALPPEASPGPSALAGTPQLLVQPAELVQEASVGEDPSVLPHGD 358
HG L HL + G P P P + G G L++ GE P P
Sbjct: 246 HGSLLAQHLRTHGGPRPHKCPVCAKG----FGQGSALLKHLR----THTGERPYPCPQCG 297
Query: 359 HRLAQGQPLVQHEVAHTAAVEVRAALTVEAL--VGGVQHVATKNCLSTSPPPCPLASYHS 416
Q L+QH+ HTA R +A +QH + P CP S
Sbjct: 298 KAFGQSSALLQHQRTHTAERPYRCPHCGKAFGQSSNLQH-HLRIHTGERPYACPHCSKAF 356
Query: 417 RISYEKVGPNFVHTAARRLPCPQELLQLQDAGARRGFVLSPQLWERGPAPAPLAPLPPVA 476
S + VH+ R C L + G ++ E A A A A
Sbjct: 357 GQSSALLQHLHVHSGERPYRCQ---LCGKAFGQASSLTKHKRVHEGAAAAAAAAAAAAAA 413
Query: 477 LASGMTHAPSGSSAAASRFSSRAHLEPRVFSSVG 510
A+G+ P S A+ R + L P S +G
Sbjct: 414 AAAGLGLGPGLSPASMMRPGQVSLLGPDAVSVLG 447
>gi|142976757 immediate early response 5 [Homo sapiens]
Length = 327
Score = 34.3 bits (77), Expect = 0.28
Identities = 60/229 (26%), Positives = 83/229 (36%), Gaps = 35/229 (15%)
Query: 273 LLCVRLGQSLQQHQQDQCQGGKVAEPHGRDLGPHLASSGQPHPALPPEA---SPGPSALA 329
L+ + L + Q + D C G +A P G P G+P A PP P P+A A
Sbjct: 35 LVSLVLRSARQVYLSDPCPGLYLAGPAGTPAPPPQQQPGEP-AAGPPAGWGEPPPPAARA 93
Query: 330 GTPQLLVQPAELVQEASVGEDPSVLPHGDHRLAQGQPLVQHEVAHTAAVEVRAALTVEAL 389
P+ QP + +SV + P V GD V V V +
Sbjct: 94 SWPETEPQP----ERSSVSDAPRV---GDE------------------VPVATVTGVGDV 128
Query: 390 VGGVQHVATKNCLSTSPPPCPLASYHSRISYEKVG--PNFVHTAARRLPCP---QELLQL 444
G + AT+ S P A+ + + G P A R CP ++
Sbjct: 129 FQGGEADATEAAWSRVEGPRQAAAREAEGTAGGWGVFPEVSRAARRPCGCPLGGEDPPGT 188
Query: 445 QDAGARRGFVLSPQLWERGPAPAPLAPLPPVALASGMTHAPSGSSAAAS 493
A R +PQ E P PAP A P A+G+ P+G A S
Sbjct: 189 PAATPRAACCCAPQPAEDEP-PAPPAVCPRKRCAAGVGGGPAGCPAPGS 236
>gi|239744754 PREDICTED: hypothetical protein XP_002343260 [Homo
sapiens]
Length = 519
Score = 34.3 bits (77), Expect = 0.28
Identities = 45/170 (26%), Positives = 76/170 (44%), Gaps = 12/170 (7%)
Query: 172 GSQGTQEAPTNLSSSSQAPSPATSSTHPQTPVPSHFQ-GLGDQSLSPG-NLGSL-AKKPE 228
G + T + + SS+S + P+TSST+ ++ +HF G GD+ L G L ++ A+ PE
Sbjct: 147 GPEMTDSSDSPDSSTSDSRDPSTSSTYIKSKSKNHFYVGGGDRFLLVGCTLTAIEAEPPE 206
Query: 229 GLAERGAHSHLWRLKTVAERGCRRQEEPDGVAGSRADPTLGFHHLLCVRLGQSLQQHQQD 288
+ G H + + AE G + + V G + H V G H
Sbjct: 207 EMLLIGRHGDVVQ---HAELG-QAVDGEAAVVGHQGQWVSLQHQESQVPEGPQAGDHALQ 262
Query: 289 QCQGGKVAEPHGRDLGPHLASSGQPHPALPPEASPGPSALAGTPQLLVQP 338
CQ + A+ G ++GP ++ + +P P++L G P L +P
Sbjct: 263 VCQVVE-AQVQGDEVGPGSTAT----LTVGVTETPPPTSLHGAPLFLAKP 307
>gi|55953110 retinoblastoma protein-binding zinc finger protein
isoform c [Homo sapiens]
Length = 1481
Score = 34.3 bits (77), Expect = 0.28
Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 21/119 (17%)
Query: 404 TSPPPCPLASYHSRISYEKVGPNFVHT--------AARRLPCPQELLQLQDAGARRGF-V 454
+SPPPCP ++ P + T +A PCP L +A A+ +
Sbjct: 770 SSPPPCPPV-----LTVATPPPPLLPTVPLPAPSSSASPHPCPS---PLSNATAQSPLPI 821
Query: 455 LSPQLWERGPAPAPLAPLPPVALASGMTHAPSGSSAAASRFSSRAHLEPRVFSSVGPAP 513
LSP + P+P+P+ P+ P+ +++ P+ SS+++S SS + SS P P
Sbjct: 822 LSPTV---SPSPSPIPPVEPL-MSAASPGPPTLSSSSSSSSSSSSFSSSSSSSSPSPPP 876
>gi|20336260 retinoblastoma protein-binding zinc finger protein
isoform b [Homo sapiens]
Length = 1682
Score = 34.3 bits (77), Expect = 0.28
Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 21/119 (17%)
Query: 404 TSPPPCPLASYHSRISYEKVGPNFVHT--------AARRLPCPQELLQLQDAGARRGF-V 454
+SPPPCP ++ P + T +A PCP L +A A+ +
Sbjct: 971 SSPPPCPPV-----LTVATPPPPLLPTVPLPAPSSSASPHPCPS---PLSNATAQSPLPI 1022
Query: 455 LSPQLWERGPAPAPLAPLPPVALASGMTHAPSGSSAAASRFSSRAHLEPRVFSSVGPAP 513
LSP + P+P+P+ P+ P+ +++ P+ SS+++S SS + SS P P
Sbjct: 1023 LSPTV---SPSPSPIPPVEPL-MSAASPGPPTLSSSSSSSSSSSSFSSSSSSSSPSPPP 1077
>gi|20336258 retinoblastoma protein-binding zinc finger protein
isoform a [Homo sapiens]
Length = 1718
Score = 34.3 bits (77), Expect = 0.28
Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 21/119 (17%)
Query: 404 TSPPPCPLASYHSRISYEKVGPNFVHT--------AARRLPCPQELLQLQDAGARRGF-V 454
+SPPPCP ++ P + T +A PCP L +A A+ +
Sbjct: 971 SSPPPCPPV-----LTVATPPPPLLPTVPLPAPSSSASPHPCPS---PLSNATAQSPLPI 1022
Query: 455 LSPQLWERGPAPAPLAPLPPVALASGMTHAPSGSSAAASRFSSRAHLEPRVFSSVGPAP 513
LSP + P+P+P+ P+ P+ +++ P+ SS+++S SS + SS P P
Sbjct: 1023 LSPTV---SPSPSPIPPVEPL-MSAASPGPPTLSSSSSSSSSSSSFSSSSSSSSPSPPP 1077
>gi|151301215 widely-interspaced zinc finger motifs [Homo sapiens]
Length = 794
Score = 34.3 bits (77), Expect = 0.28
Identities = 35/115 (30%), Positives = 47/115 (40%), Gaps = 10/115 (8%)
Query: 297 EPHGRDLGPHLASSGQPHPALPPEASPGP-SALAGTP-QLLVQPAELVQEASV----GED 350
EP DL P LA G P A P SP P S LAG P + PA++ +E S+ G
Sbjct: 427 EPPAGDLAPALAEDGPPTVAPGPVQSPLPLSPLAGRPGKPGAGPAQVPRELSLTPITGAK 486
Query: 351 PSVLPH----GDHRLAQGQPLVQHEVAHTAAVEVRAALTVEALVGGVQHVATKNC 401
PS + R Q L+ EV ++ + L H +T+ C
Sbjct: 487 PSATGYLGSVAAKRPLQEDRLLPAEVKAKTYIQTELPFKAKTLHEKTSHSSTEAC 541
>gi|56549696 E1A binding protein p400 [Homo sapiens]
Length = 3122
Score = 33.9 bits (76), Expect = 0.37
Identities = 47/179 (26%), Positives = 68/179 (37%), Gaps = 15/179 (8%)
Query: 180 PTNLSSSSQAPSPATSSTHPQTPVPSHFQGLGDQSLSPGNLGSLAKKPEGLAERGAHSHL 239
P L + + A + PQ PSH G QS P L L + + G +
Sbjct: 1514 PAKLRAQTTAQASTPGQPPPQPQAPSHAAG---QSALPQRL-VLPSQAQARLPSGEVVKI 1569
Query: 240 WRLKTVAERGCR--RQEEPDGVAGSRADPTLGFHHLLCVRLGQSLQQHQQDQCQGGKVAE 297
+L ++ R + E P + + TL L + GQ LQ +
Sbjct: 1570 AQLASITGPQSRVAQPETPVTLQFQGSKFTLSHSQLRQLTAGQPLQLQGSVLQIVSAPGQ 1629
Query: 298 PHGRDLGP----HLASSGQPHPAL---PPEASPGPSALAGTPQLLVQPAELVQEASVGE 349
P+ R GP ++ +G H AL PP P P+ L TPQ+ V V +VGE
Sbjct: 1630 PYLRAPGPVVMQTVSQAGAVHGALGSKPPAGGPSPAPL--TPQVGVPGRVAVNALAVGE 1686
>gi|5454102 transforming, acidic coiled-coil containing protein 3
[Homo sapiens]
Length = 838
Score = 33.9 bits (76), Expect = 0.37
Identities = 44/170 (25%), Positives = 61/170 (35%), Gaps = 34/170 (20%)
Query: 125 TDPQQALQRSQCGR-----LVGRCLDCPMDLGPPEVL--LLHLDFVGMKAPDGCGSQGTQ 177
T P A+ + CG L G L CP +G P L AP+
Sbjct: 249 TSPPGAIPKEACGGAPLQGLPGEALGCPAGVGTPVPADGTQTLTCAHTSAPE-------S 301
Query: 178 EAPTN---------LSSSSQAPSPATSSTHPQTPVPSHFQGLGDQSLSPGNLGSLAKKPE 228
APTN LS + + +S+ PV F +S G A P
Sbjct: 302 TAPTNHLVAGRAMTLSPQEEVAAGQMASSSRSGPVKLEF------DVSDGATSKRAPPPR 355
Query: 229 GLAER-GAHSHLWRLKTVAERGCRRQEEPDGVAGSRADPTL----GFHHL 273
L ER G L + ++ + EE DG +G+ DP + G +HL
Sbjct: 356 RLGERSGLKPPLRKAAVRQQKAPQEVEEDDGRSGAGEDPPMPASRGSYHL 405
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.131 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,259,598
Number of Sequences: 37866
Number of extensions: 1426166
Number of successful extensions: 9534
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 172
Number of HSP's that attempted gapping in prelim test: 9034
Number of HSP's gapped (non-prelim): 702
length of query: 515
length of database: 18,247,518
effective HSP length: 107
effective length of query: 408
effective length of database: 14,195,856
effective search space: 5791909248
effective search space used: 5791909248
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.