LOC100292251 22327

Name: LOC100292251	Sequence: fasta or formatted (185aa)		NCBI GI: 239755282
Description: PREDICTED: similar to Tripartite motif-containing protein 43-like protein 1		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.9 9 1 C cysteine 7.0 13 1 D aspartate 4.3 8 1 E glutamate 5.4 10 2 F phenylalanine 4.3 8 2 G glycine 4.9 9 2 H histidine 4.9 9 1 I isoleucine 5.4 10 1 K lysine 5.9 11 2 L leucine 16.2 30 2 M methionine 2.7 5 1 N asparagine 4.3 8 1 P proline 5.4 10 2 Q glutamine 4.3 8 1 R arginine 4.3 8 1 S serine 6.5 12 2 T threonine 4.3 8 1 V valine 1.6 3 1 W tryptophan 2.2 4 1 Y tyrosine 1.1 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to Tripartite motif-containing p... LOC100290015 0.989 PREDICTED: hypothetical protein XP_002348292 LOC653192 0.406 PREDICTED: Tripartite motif-containing protein 43-li... TRIM43 0.406 tripartite motif-containing 43 TRIM48 0.323 tripartite motif-containing 48 LOC120824 0.320 PREDICTED: similar to hCG1802386 LOC120824 0.320 PREDICTED: similar to hCG1802386 LOC120824 0.320 PREDICTED: similar to hCG1802386 LOC652859 0.315 PREDICTED: similar to Tripartite motif-containing pr... SPRYD5 0.306 SPRY domain containing 5 LOC729384 0.301 hypothetical protein LOC729384 LOC100134006 0.301 PREDICTED: similar to ring finger protein 18 isofor... LOC399939 0.301 PREDICTED: similar to ring finger protein 18 LOC100131392 0.301 PREDICTED: similar to ring finger protein 18 LOC399939 0.301 PREDICTED: similar to ring finger protein 18 TRIM53 0.296 tripartite motif-containing 53 LOC642425 0.296 tripartite motif-containing 53-like LOC642425 0.296 PREDICTED: tripartite motif-containing 53-like [Hom... LOC283116 0.296 PREDICTED: similar to ring finger protein 18 isofor... LOC283116 0.296 PREDICTED: similar to ring finger protein 18 isofor... LOC283116 0.296 PREDICTED: similar to ring finger protein 18 LOC283116 0.296 PREDICTED: similar to ring finger protein 18 LOC340970 0.293 PREDICTED: similar to tripartite motif-containing 5... LOC340970 0.290 PREDICTED: similar to tripartite motif-containing 5... LOC340970 0.290 PREDICTED: similar to tripartite motif-containing 5... LOC653111 0.288 PREDICTED: similar to ring finger protein 18 TRIM49 0.288 ring finger protein 18 TRIM64 0.253 tripartite motif-containing 64 LOC642446 0.253 PREDICTED: tripartite motif-containing protein 64B-... LOC646754 0.231 PREDICTED: tripartite motif-containing protein 64C-... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.