Guide to the Human Genome
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Search of human proteins with 239755190

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239755190 PREDICTED: hypothetical protein [Homo sapiens]
         (98 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239755190 PREDICTED: hypothetical protein [Homo sapiens]           211   8e-56
gi|239749686 PREDICTED: hypothetical protein [Homo sapiens]           211   8e-56
gi|239743954 PREDICTED: hypothetical protein XP_002344279 [Homo ...   211   8e-56
gi|197276594 RNA binding motif protein 20 [Homo sapiens]               32   0.083
gi|5174545 myocyte enhancer factor 2D [Homo sapiens]                   31   0.19 
gi|40807489 egf-like module containing, mucin-like, hormone rece...    29   0.92 
gi|239756172 PREDICTED: hypothetical protein [Homo sapiens]            28   1.2  
gi|239750674 PREDICTED: hypothetical protein [Homo sapiens]            28   1.2  
gi|239744984 PREDICTED: hypothetical protein XP_002343349 [Homo ...    28   1.2  
gi|163310741 LIM and calponin homology domains 1 isoform a [Homo...    28   1.2  
gi|47458036 hereditary sensory neuropathy, type II [Homo sapiens]      28   1.6  
gi|118498364 dapper 1 isoform 2 [Homo sapiens]                         28   2.1  
gi|24158478 dapper 1 isoform 1 [Homo sapiens]                          28   2.1  
gi|224548936 hypothetical protein LOC100170229 [Homo sapiens]          27   2.7  
gi|215422375 neural precursor cell expressed, developmentally do...    27   2.7  
gi|5453680 neural precursor cell expressed, developmentally down...    27   2.7  
gi|239753883 PREDICTED: hypothetical protein [Homo sapiens]            27   4.6  
gi|239748442 PREDICTED: hypothetical protein XP_002346660 [Homo ...    27   4.6  
gi|169174934 PREDICTED: similar to ADAMTS-like 2 [Homo sapiens]        27   4.6  
gi|239742378 PREDICTED: hypothetical protein XP_002342507 [Homo ...    27   4.6  
gi|81158080 cystin 1 [Homo sapiens]                                    27   4.6  
gi|223718260 ADAMTS-like 2 precursor [Homo sapiens]                    26   6.0  
gi|41281450 ADAMTS-like 2 precursor [Homo sapiens]                     26   6.0  
gi|27894378 chloride intracellular channel 6 [Homo sapiens]            26   6.0  
gi|242117953 SH3 domain-containing protein C1orf113 isoform 1 [H...    26   7.8  
gi|242117948 SH3 domain-containing protein C1orf113 isoform 2 [H...    26   7.8  
gi|239753405 PREDICTED: hypothetical protein [Homo sapiens]            26   7.8  
gi|239747975 PREDICTED: hypothetical protein XP_002346485 [Homo ...    26   7.8  
gi|239741872 PREDICTED: hypothetical protein XP_002342329 [Homo ...    26   7.8  
gi|239508790 PREDICTED: hypothetical protein, partial [Homo sapi...    26   7.8  

>gi|239755190 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 98

 Score =  211 bits (538), Expect = 8e-56
 Identities = 98/98 (100%), Positives = 98/98 (100%)

Query: 1  MLSQCPFKALSPQIPNQQPFQGGATQDQAFDEPRLFGVPSWESHVSPSEIPNGRQRTPRD 60
          MLSQCPFKALSPQIPNQQPFQGGATQDQAFDEPRLFGVPSWESHVSPSEIPNGRQRTPRD
Sbjct: 1  MLSQCPFKALSPQIPNQQPFQGGATQDQAFDEPRLFGVPSWESHVSPSEIPNGRQRTPRD 60

Query: 61 HIQASGTCQDAIDGPGPNPAREGKGRDRTLETHGCLAI 98
          HIQASGTCQDAIDGPGPNPAREGKGRDRTLETHGCLAI
Sbjct: 61 HIQASGTCQDAIDGPGPNPAREGKGRDRTLETHGCLAI 98


>gi|239749686 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 98

 Score =  211 bits (538), Expect = 8e-56
 Identities = 98/98 (100%), Positives = 98/98 (100%)

Query: 1  MLSQCPFKALSPQIPNQQPFQGGATQDQAFDEPRLFGVPSWESHVSPSEIPNGRQRTPRD 60
          MLSQCPFKALSPQIPNQQPFQGGATQDQAFDEPRLFGVPSWESHVSPSEIPNGRQRTPRD
Sbjct: 1  MLSQCPFKALSPQIPNQQPFQGGATQDQAFDEPRLFGVPSWESHVSPSEIPNGRQRTPRD 60

Query: 61 HIQASGTCQDAIDGPGPNPAREGKGRDRTLETHGCLAI 98
          HIQASGTCQDAIDGPGPNPAREGKGRDRTLETHGCLAI
Sbjct: 61 HIQASGTCQDAIDGPGPNPAREGKGRDRTLETHGCLAI 98


>gi|239743954 PREDICTED: hypothetical protein XP_002344279 [Homo
          sapiens]
          Length = 98

 Score =  211 bits (538), Expect = 8e-56
 Identities = 98/98 (100%), Positives = 98/98 (100%)

Query: 1  MLSQCPFKALSPQIPNQQPFQGGATQDQAFDEPRLFGVPSWESHVSPSEIPNGRQRTPRD 60
          MLSQCPFKALSPQIPNQQPFQGGATQDQAFDEPRLFGVPSWESHVSPSEIPNGRQRTPRD
Sbjct: 1  MLSQCPFKALSPQIPNQQPFQGGATQDQAFDEPRLFGVPSWESHVSPSEIPNGRQRTPRD 60

Query: 61 HIQASGTCQDAIDGPGPNPAREGKGRDRTLETHGCLAI 98
          HIQASGTCQDAIDGPGPNPAREGKGRDRTLETHGCLAI
Sbjct: 61 HIQASGTCQDAIDGPGPNPAREGKGRDRTLETHGCLAI 98


>gi|197276594 RNA binding motif protein 20 [Homo sapiens]
          Length = 1227

 Score = 32.3 bits (72), Expect = 0.083
 Identities = 15/40 (37%), Positives = 20/40 (50%)

Query: 48  SEIPNGRQRTPRDHIQASGTCQDAIDGPGPNPAREGKGRD 87
           S  P  R  +PR H  +  +C  +   PGP+ A  G GRD
Sbjct: 635 SRSPVSRSLSPRSHTPSFTSCSSSHSPPGPSRADWGNGRD 674


>gi|5174545 myocyte enhancer factor 2D [Homo sapiens]
          Length = 521

 Score = 31.2 bits (69), Expect = 0.19
 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 2/64 (3%)

Query: 4   QCPFKALSPQIPNQQPFQGGATQDQAFDEPRLFGVPSWESHVSPSEIPNGRQRTPRDHIQ 63
           Q P +   PQ P QQP Q    Q Q   +P+    P  +SH+ P  + N    +P  H+ 
Sbjct: 368 QQPQQPQQPQPPQQQPPQPQQPQPQQPQQPQ--QPPQQQSHLVPVSLSNLIPGSPLPHVG 425

Query: 64  ASGT 67
           A+ T
Sbjct: 426 AALT 429


>gi|40807489 egf-like module containing, mucin-like, hormone
          receptor-like sequence 1 [Homo sapiens]
          Length = 886

 Score = 28.9 bits (63), Expect = 0.92
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 2/36 (5%)

Query: 40 SWESHVSPSEIPNGRQRTPRDH--IQASGTCQDAID 73
          SWE H+ P+  PN +    RD     A  TC + +D
Sbjct: 17 SWEGHIRPTRKPNTKGNNCRDSTLCPAYATCTNTVD 52


>gi|239756172 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 122

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 14/49 (28%), Positives = 21/49 (42%)

Query: 42 ESHVSPSEIPNGRQRTPRDHIQASGTCQDAIDGPGPNPAREGKGRDRTL 90
          ES  +   +PN    +P  +    G C     GP  +PA+ G+ R   L
Sbjct: 5  ESKAAELRVPNSLFPSPPSNPLLGGHCGRPTKGPAASPAKSGRSRPTIL 53


>gi|239750674 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 122

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 14/49 (28%), Positives = 21/49 (42%)

Query: 42 ESHVSPSEIPNGRQRTPRDHIQASGTCQDAIDGPGPNPAREGKGRDRTL 90
          ES  +   +PN    +P  +    G C     GP  +PA+ G+ R   L
Sbjct: 5  ESKAAELRVPNSLFPSPPSNPLLGGHCGRPTKGPAASPAKSGRSRPTIL 53


>gi|239744984 PREDICTED: hypothetical protein XP_002343349 [Homo
          sapiens]
          Length = 122

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 14/49 (28%), Positives = 21/49 (42%)

Query: 42 ESHVSPSEIPNGRQRTPRDHIQASGTCQDAIDGPGPNPAREGKGRDRTL 90
          ES  +   +PN    +P  +    G C     GP  +PA+ G+ R   L
Sbjct: 5  ESKAAELRVPNSLFPSPPSNPLLGGHCGRPTKGPAASPAKSGRSRPTIL 53


>gi|163310741 LIM and calponin homology domains 1 isoform a [Homo
            sapiens]
          Length = 1083

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 10/86 (11%)

Query: 6    PFKALSPQI---PNQQPFQGGATQDQAFDEPRLFGVPSWESHV--SPSEIPNGRQRTPRD 60
            P    +PQ+   P+Q       T      +P+   +    +H   SPSE    R+++PR+
Sbjct: 928  PHCGTNPQLAQDPSQNQQTSNPTHSSEDVKPKTLPLDKSINHQIESPSE---RRKKSPRE 984

Query: 61   HIQAS--GTCQDAIDGPGPNPAREGK 84
            H QA     C     G  PN +  GK
Sbjct: 985  HFQAGPFSPCSPTPPGQSPNRSISGK 1010


>gi|47458036 hereditary sensory neuropathy, type II [Homo sapiens]
          Length = 434

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 11/21 (52%), Positives = 13/21 (61%)

Query: 13  QIPNQQPFQGGATQDQAFDEP 33
           QIP Q+P QGG T    F+ P
Sbjct: 180 QIPEQKPVQGGPTSSSVFEFP 200


>gi|118498364 dapper 1 isoform 2 [Homo sapiens]
          Length = 799

 Score = 27.7 bits (60), Expect = 2.1
 Identities = 20/77 (25%), Positives = 30/77 (38%), Gaps = 2/77 (2%)

Query: 8   KALSPQIPNQQPFQGGATQDQAFDEPRLFGVPSWESHVSPSEIPNGRQRTPRDHIQASGT 67
           +A S ++P  +    GA  D           P+ + H   S I  G   +P++  Q SG 
Sbjct: 390 QAESKRVPLPEGCPSGAASDLQSKHLPKTAKPASQEHARCSAIGTGE--SPKESAQLSGA 447

Query: 68  CQDAIDGPGPNPAREGK 84
                   GP P +E K
Sbjct: 448 SPKESPSRGPAPPQENK 464


>gi|24158478 dapper 1 isoform 1 [Homo sapiens]
          Length = 836

 Score = 27.7 bits (60), Expect = 2.1
 Identities = 20/77 (25%), Positives = 30/77 (38%), Gaps = 2/77 (2%)

Query: 8   KALSPQIPNQQPFQGGATQDQAFDEPRLFGVPSWESHVSPSEIPNGRQRTPRDHIQASGT 67
           +A S ++P  +    GA  D           P+ + H   S I  G   +P++  Q SG 
Sbjct: 427 QAESKRVPLPEGCPSGAASDLQSKHLPKTAKPASQEHARCSAIGTGE--SPKESAQLSGA 484

Query: 68  CQDAIDGPGPNPAREGK 84
                   GP P +E K
Sbjct: 485 SPKESPSRGPAPPQENK 501


>gi|224548936 hypothetical protein LOC100170229 [Homo sapiens]
          Length = 715

 Score = 27.3 bits (59), Expect = 2.7
 Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 3/58 (5%)

Query: 14  IPNQQPFQGGATQDQAFDEPRLFGVPSWESHVSPSEIPNGRQRTPRDHIQASGTCQDA 71
           +P    ++   T+  +  + R    PS  S  SPS  P+G Q   +D  QA  T   A
Sbjct: 646 VPRSPDWKRSPTRTSSLSQNR---TPSKTSSHSPSTFPSGGQTLSQDDSQADATTSKA 700


>gi|215422375 neural precursor cell expressed, developmentally
           down-regulated 9 isoform 3 [Homo sapiens]
          Length = 834

 Score = 27.3 bits (59), Expect = 2.7
 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 2/49 (4%)

Query: 8   KALSPQIPNQQPFQGGATQDQAFDEPRLFGVPSWESHVSPSEIPNGRQR 56
           ++LSP  P  Q  Q   +Q+ A+D PR  GV   E     SE  N ++R
Sbjct: 295 QSLSPNHPPPQLGQSVGSQNDAYDVPR--GVQFLEPPAETSEKANPQER 341


>gi|5453680 neural precursor cell expressed, developmentally
           down-regulated 9 isoform 1 [Homo sapiens]
          Length = 834

 Score = 27.3 bits (59), Expect = 2.7
 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 2/49 (4%)

Query: 8   KALSPQIPNQQPFQGGATQDQAFDEPRLFGVPSWESHVSPSEIPNGRQR 56
           ++LSP  P  Q  Q   +Q+ A+D PR  GV   E     SE  N ++R
Sbjct: 295 QSLSPNHPPPQLGQSVGSQNDAYDVPR--GVQFLEPPAETSEKANPQER 341


>gi|239753883 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 296

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 3/39 (7%)

Query: 54  RQRTPRDHIQASGTCQDAIDGPGPNPAREGKGRDRTLET 92
           R R PR  +         +  PGP     GKGR+R L T
Sbjct: 126 RLRRPRHRLPGGSR---RLPAPGPRAPAPGKGRERELRT 161


>gi|239748442 PREDICTED: hypothetical protein XP_002346660 [Homo
           sapiens]
          Length = 296

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 3/39 (7%)

Query: 54  RQRTPRDHIQASGTCQDAIDGPGPNPAREGKGRDRTLET 92
           R R PR  +         +  PGP     GKGR+R L T
Sbjct: 126 RLRRPRHRLPGGSR---RLPAPGPRAPAPGKGRERELRT 161


>gi|169174934 PREDICTED: similar to ADAMTS-like 2 [Homo sapiens]
          Length = 660

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 13/78 (16%)

Query: 14  IPNQQPFQGGATQDQAFDEPRLFGVPSWESHVSPSEIPNGRQRTPRDHIQASGTCQDAID 73
           IP+     G A+ ++   + RLFG P  +  + PS+   G+        + +  C+ A  
Sbjct: 73  IPHNGSLYGQASSERLGLDNRLFGHPGLDMELGPSQ---GQ--------ETNEVCEQAGG 121

Query: 74  GPGPNPAREGKG-RDRTL 90
           G    P R GKG RDR +
Sbjct: 122 GACEGPPR-GKGFRDRNV 138


>gi|239742378 PREDICTED: hypothetical protein XP_002342507 [Homo
           sapiens]
          Length = 296

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 3/39 (7%)

Query: 54  RQRTPRDHIQASGTCQDAIDGPGPNPAREGKGRDRTLET 92
           R R PR  +         +  PGP     GKGR+R L T
Sbjct: 126 RLRRPRHRLPGGSR---RLPAPGPRAPAPGKGRERELRT 161


>gi|81158080 cystin 1 [Homo sapiens]
          Length = 158

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 16/55 (29%), Positives = 21/55 (38%), Gaps = 10/55 (18%)

Query: 46 SPSEIPNG----------RQRTPRDHIQASGTCQDAIDGPGPNPAREGKGRDRTL 90
          SP  +P G          R+R P    +  G   +   G  P+P     GRD TL
Sbjct: 17 SPESLPAGPGAAALEGGTRRRVPVAAAEVPGAAAEEAPGRDPSPVAPPDGRDETL 71


>gi|223718260 ADAMTS-like 2 precursor [Homo sapiens]
          Length = 951

 Score = 26.2 bits (56), Expect = 6.0
 Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 13/78 (16%)

Query: 14  IPNQQPFQGGATQDQAFDEPRLFGVPSWESHVSPSEIPNGRQRTPRDHIQASGTCQDAID 73
           +P+     G A+ ++   + RLFG P  +  + PS+   G+        + +  C+ A  
Sbjct: 364 VPHNGSLYGQASSERLGLDNRLFGHPGLDMELGPSQ---GQ--------ETNEVCEQAGG 412

Query: 74  GPGPNPAREGKG-RDRTL 90
           G    P R GKG RDR +
Sbjct: 413 GACEGPPR-GKGFRDRNV 429


>gi|41281450 ADAMTS-like 2 precursor [Homo sapiens]
          Length = 951

 Score = 26.2 bits (56), Expect = 6.0
 Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 13/78 (16%)

Query: 14  IPNQQPFQGGATQDQAFDEPRLFGVPSWESHVSPSEIPNGRQRTPRDHIQASGTCQDAID 73
           +P+     G A+ ++   + RLFG P  +  + PS+   G+        + +  C+ A  
Sbjct: 364 VPHNGSLYGQASSERLGLDNRLFGHPGLDMELGPSQ---GQ--------ETNEVCEQAGG 412

Query: 74  GPGPNPAREGKG-RDRTL 90
           G    P R GKG RDR +
Sbjct: 413 GACEGPPR-GKGFRDRNV 429


>gi|27894378 chloride intracellular channel 6 [Homo sapiens]
          Length = 686

 Score = 26.2 bits (56), Expect = 6.0
 Identities = 23/80 (28%), Positives = 30/80 (37%), Gaps = 4/80 (5%)

Query: 18  QPFQGGATQDQAFDEPRLFGVPSWESHVSPSEIPNGRQRTPRDHIQASGTCQDAIDGPGP 77
           Q  +G +    A  EPR       E   +P       QR       ASG   D++D  GP
Sbjct: 106 QQVEGASPGRGAQGEPRGEAQREPEDSAAPERQEEAEQRPEVPEGSASGEAGDSVDAEGP 165

Query: 78  ---NPAREGKGRDRTLETHG 94
              N   EG   D ++E  G
Sbjct: 166 LGDNIEAEGPAGD-SVEAEG 184


>gi|242117953 SH3 domain-containing protein C1orf113 isoform 1 [Homo
           sapiens]
          Length = 756

 Score = 25.8 bits (55), Expect = 7.8
 Identities = 13/46 (28%), Positives = 20/46 (43%), Gaps = 4/46 (8%)

Query: 15  PNQQPFQGGATQDQAFDEPRLFGVPSWESHVSPSEIPNGRQRTPRD 60
           P Q   + G     A ++P     P  E+   P E P+  +RTP +
Sbjct: 561 PRQAELKSGPASRPALEKPH----PHEEATTLPEEAPSNDERTPEE 602


>gi|242117948 SH3 domain-containing protein C1orf113 isoform 2 [Homo
           sapiens]
          Length = 645

 Score = 25.8 bits (55), Expect = 7.8
 Identities = 13/46 (28%), Positives = 20/46 (43%), Gaps = 4/46 (8%)

Query: 15  PNQQPFQGGATQDQAFDEPRLFGVPSWESHVSPSEIPNGRQRTPRD 60
           P Q   + G     A ++P     P  E+   P E P+  +RTP +
Sbjct: 450 PRQAELKSGPASRPALEKPH----PHEEATTLPEEAPSNDERTPEE 491


>gi|239753405 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 219

 Score = 25.8 bits (55), Expect = 7.8
 Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 1/46 (2%)

Query: 46  SPSEIPNGRQRTPRDHIQASGTCQDAIDGPGPNPAREGKGRDRTLE 91
           SP        R PR     +GT        GP  +R G+GR R L+
Sbjct: 132 SPRRAIEAGARPPRQR-PGAGTAAARASRAGPRASRRGRGRGRGLQ 176


>gi|239747975 PREDICTED: hypothetical protein XP_002346485 [Homo
           sapiens]
          Length = 219

 Score = 25.8 bits (55), Expect = 7.8
 Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 1/46 (2%)

Query: 46  SPSEIPNGRQRTPRDHIQASGTCQDAIDGPGPNPAREGKGRDRTLE 91
           SP        R PR     +GT        GP  +R G+GR R L+
Sbjct: 132 SPRRAIEAGARPPRQR-PGAGTAAARASRAGPRASRRGRGRGRGLQ 176


>gi|239741872 PREDICTED: hypothetical protein XP_002342329 [Homo
           sapiens]
          Length = 219

 Score = 25.8 bits (55), Expect = 7.8
 Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 1/46 (2%)

Query: 46  SPSEIPNGRQRTPRDHIQASGTCQDAIDGPGPNPAREGKGRDRTLE 91
           SP        R PR     +GT        GP  +R G+GR R L+
Sbjct: 132 SPRRAIEAGARPPRQR-PGAGTAAARASRAGPRASRRGRGRGRGLQ 176


>gi|239508790 PREDICTED: hypothetical protein, partial [Homo
           sapiens]
          Length = 490

 Score = 25.8 bits (55), Expect = 7.8
 Identities = 22/73 (30%), Positives = 28/73 (38%), Gaps = 5/73 (6%)

Query: 7   FKALSPQIPNQQPFQGGATQDQAFDEPRLFGVPSWESHVS--PSEIPNGRQRTPRDHIQA 64
           +  +SP  P   P   G     +     L GVPS  S VS  PS++P+     P      
Sbjct: 97  YSLVSPHRPLVSPLLSGVPSPPSDVPSLLSGVPSLPSDVSSPPSDVPSLLSDVPS---LL 153

Query: 65  SGTCQDAIDGPGP 77
           SG      D P P
Sbjct: 154 SGVPSPPSDVPSP 166


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.135    0.429 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,365,995
Number of Sequences: 37866
Number of extensions: 288313
Number of successful extensions: 556
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 545
Number of HSP's gapped (non-prelim): 36
length of query: 98
length of database: 18,247,518
effective HSP length: 69
effective length of query: 29
effective length of database: 15,634,764
effective search space: 453408156
effective search space used: 453408156
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
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