Search of human proteins with 239754856

Search of human proteins with 239754856

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239754856 PREDICTED: p150-like [Homo sapiens]
         (262 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239754856 PREDICTED: p150-like [Homo sapiens]                      549   e-157
gi|239743530 PREDICTED: p150-like [Homo sapiens]                      548   e-156
gi|239749395 PREDICTED: p150-like [Homo sapiens]                      547   e-156
gi|239754376 PREDICTED: similar to putative p150 [Homo sapiens]       400   e-112
gi|239748989 PREDICTED: hypothetical protein XP_002346845 [Homo ...   400   e-112
gi|239743009 PREDICTED: hypothetical protein XP_002342695 [Homo ...   400   e-112
gi|239754371 PREDICTED: hypothetical protein [Homo sapiens]           345   2e-95
gi|239748922 PREDICTED: hypothetical protein [Homo sapiens]           345   2e-95
gi|239742944 PREDICTED: hypothetical protein [Homo sapiens]           345   2e-95
gi|239756280 PREDICTED: hypothetical protein XP_002344872 [Homo ...   253   9e-68
gi|239750807 PREDICTED: hypothetical protein XP_002347566 [Homo ...   253   9e-68
gi|239745167 PREDICTED: hypothetical protein XP_002343386 [Homo ...   253   9e-68
gi|239752486 PREDICTED: hypothetical protein XP_002347335 [Homo ...   111   6e-25
gi|239754279 PREDICTED: hypothetical protein XP_002345940 [Homo ...    51   9e-07
gi|239748812 PREDICTED: hypothetical protein XP_002346807 [Homo ...    51   9e-07
gi|239740912 PREDICTED: hypothetical protein XP_002344084 [Homo ...    51   9e-07
gi|239740849 PREDICTED: hypothetical protein XP_002344051 [Homo ...    51   9e-07
gi|38570064 hypothetical protein LOC136895 [Homo sapiens]              31   0.96 
gi|148491080 trinucleotide repeat containing 6B isoform 2 [Homo ...    30   1.6  
gi|241982729 trinucleotide repeat containing 6B isoform 1 [Homo ...    30   1.6  
gi|154813197 talpid3 protein [Homo sapiens]                            30   1.6  
gi|28626523 olfactory receptor, family 2, subfamily H, member 1 ...    30   1.6  
gi|6912622 RAD54 homolog B [Homo sapiens]                              30   2.1  
gi|42476164 POU class 2 homeobox 1 [Homo sapiens]                      29   4.8  
gi|148746183 ubiquitin specific protease 35 [Homo sapiens]             28   6.2  
gi|20806097 nucleolar complex associated 3 homolog [Homo sapiens]      28   6.2  
gi|214830928 coiled-coil domain containing 113 isoform 2 [Homo s...    28   8.1  
gi|19923432 coiled-coil domain containing 113 isoform 1 [Homo sa...    28   8.1  
gi|30795117 F-box only protein, helicase, 18 isoform 1 [Homo sap...    28   8.1  
gi|30795119 F-box only protein, helicase, 18 isoform 2 [Homo sap...    28   8.1  

>gi|239754856 PREDICTED: p150-like [Homo sapiens]
          Length = 262

 Score =  549 bits (1415), Expect = e-157
 Identities = 262/262 (100%), Positives = 262/262 (100%)

Query: 1   MKMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRAHIAKSILSQKNKAGGITL 60
           MKMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRAHIAKSILSQKNKAGGITL
Sbjct: 1   MKMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRAHIAKSILSQKNKAGGITL 60

Query: 61  PDFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSLF 120
           PDFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSLF
Sbjct: 61  PDFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSLF 120

Query: 121 NKWCWENWLATCRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGITLQDIGMGK 180
           NKWCWENWLATCRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGITLQDIGMGK
Sbjct: 121 NKWCWENWLATCRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGITLQDIGMGK 180

Query: 181 DFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLISR 240
           DFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLISR
Sbjct: 181 DFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLISR 240

Query: 241 IYNELKQIYKKKTTPSKSGPRT 262
           IYNELKQIYKKKTTPSKSGPRT
Sbjct: 241 IYNELKQIYKKKTTPSKSGPRT 262


>gi|239743530 PREDICTED: p150-like [Homo sapiens]
          Length = 262

 Score =  548 bits (1411), Expect = e-156
 Identities = 261/262 (99%), Positives = 262/262 (100%)

Query: 1   MKMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRAHIAKSILSQKNKAGGITL 60
           M+MAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRAHIAKSILSQKNKAGGITL
Sbjct: 1   MQMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRAHIAKSILSQKNKAGGITL 60

Query: 61  PDFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSLF 120
           PDFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSLF
Sbjct: 61  PDFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSLF 120

Query: 121 NKWCWENWLATCRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGITLQDIGMGK 180
           NKWCWENWLATCRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGITLQDIGMGK
Sbjct: 121 NKWCWENWLATCRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGITLQDIGMGK 180

Query: 181 DFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLISR 240
           DFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLISR
Sbjct: 181 DFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLISR 240

Query: 241 IYNELKQIYKKKTTPSKSGPRT 262
           IYNELKQIYKKKTTPSKSGPRT
Sbjct: 241 IYNELKQIYKKKTTPSKSGPRT 262


>gi|239749395 PREDICTED: p150-like [Homo sapiens]
          Length = 262

 Score =  547 bits (1409), Expect = e-156
 Identities = 261/262 (99%), Positives = 261/262 (99%)

Query: 1   MKMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRAHIAKSILSQKNKAGGITL 60
           MKMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRAHIAKSILSQKNKAGGITL
Sbjct: 1   MKMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRAHIAKSILSQKNKAGGITL 60

Query: 61  PDFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSLF 120
           PDFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSLF
Sbjct: 61  PDFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSLF 120

Query: 121 NKWCWENWLATCRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGITLQDIGMGK 180
           NKWCWENWLATCRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGITLQDIGMGK
Sbjct: 121 NKWCWENWLATCRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGITLQDIGMGK 180

Query: 181 DFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLISR 240
           DFMSKTPKAMATKAKIDKWD IKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLISR
Sbjct: 181 DFMSKTPKAMATKAKIDKWDQIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLISR 240

Query: 241 IYNELKQIYKKKTTPSKSGPRT 262
           IYNELKQIYKKKTTPSKSGPRT
Sbjct: 241 IYNELKQIYKKKTTPSKSGPRT 262


>gi|239754376 PREDICTED: similar to putative p150 [Homo sapiens]
          Length = 295

 Score =  400 bits (1029), Expect = e-112
 Identities = 188/194 (96%), Positives = 190/194 (97%)

Query: 60  LPDFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSL 119
           LPDFKLYYKATVTKTAWY YQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSL
Sbjct: 2   LPDFKLYYKATVTKTAWYRYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSL 61

Query: 120 FNKWCWENWLATCRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGITLQDIGMG 179
           FNKWCWENWLA CRKLKLDPFLTPYTKINSRWIK LNVRPKTIKT+EENLGIT+QDIGMG
Sbjct: 62  FNKWCWENWLAICRKLKLDPFLTPYTKINSRWIKYLNVRPKTIKTVEENLGITIQDIGMG 121

Query: 180 KDFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLIS 239
           KDFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLIS
Sbjct: 122 KDFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLIS 181

Query: 240 RIYNELKQIYKKKT 253
           RIYNE KQIYKKKT
Sbjct: 182 RIYNEFKQIYKKKT 195


>gi|239748989 PREDICTED: hypothetical protein XP_002346845 [Homo
           sapiens]
          Length = 295

 Score =  400 bits (1029), Expect = e-112
 Identities = 188/194 (96%), Positives = 190/194 (97%)

Query: 60  LPDFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSL 119
           LPDFKLYYKATVTKTAWY YQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSL
Sbjct: 2   LPDFKLYYKATVTKTAWYRYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSL 61

Query: 120 FNKWCWENWLATCRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGITLQDIGMG 179
           FNKWCWENWLA CRKLKLDPFLTPYTKINSRWIK LNVRPKTIKT+EENLGIT+QDIGMG
Sbjct: 62  FNKWCWENWLAICRKLKLDPFLTPYTKINSRWIKYLNVRPKTIKTVEENLGITIQDIGMG 121

Query: 180 KDFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLIS 239
           KDFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLIS
Sbjct: 122 KDFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLIS 181

Query: 240 RIYNELKQIYKKKT 253
           RIYNE KQIYKKKT
Sbjct: 182 RIYNEFKQIYKKKT 195


>gi|239743009 PREDICTED: hypothetical protein XP_002342695 [Homo
           sapiens]
          Length = 295

 Score =  400 bits (1029), Expect = e-112
 Identities = 188/194 (96%), Positives = 190/194 (97%)

Query: 60  LPDFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSL 119
           LPDFKLYYKATVTKTAWY YQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSL
Sbjct: 2   LPDFKLYYKATVTKTAWYRYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSL 61

Query: 120 FNKWCWENWLATCRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGITLQDIGMG 179
           FNKWCWENWLA CRKLKLDPFLTPYTKINSRWIK LNVRPKTIKT+EENLGIT+QDIGMG
Sbjct: 62  FNKWCWENWLAICRKLKLDPFLTPYTKINSRWIKYLNVRPKTIKTVEENLGITIQDIGMG 121

Query: 180 KDFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLIS 239
           KDFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLIS
Sbjct: 122 KDFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLIS 181

Query: 240 RIYNELKQIYKKKT 253
           RIYNE KQIYKKKT
Sbjct: 182 RIYNEFKQIYKKKT 195


>gi|239754371 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 224

 Score =  345 bits (886), Expect = 2e-95
 Identities = 162/196 (82%), Positives = 175/196 (89%)

Query: 46  KSILSQKNKAGGITLPDFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEITPHIYNYLIF 105
           K  L +KN AGGI LPDFKL+YKATVTKTAWYWYQNR IDQW+RTE SEI  H+YN+LIF
Sbjct: 29  KCSLMEKNTAGGIMLPDFKLHYKATVTKTAWYWYQNRHIDQWSRTETSEIKQHVYNHLIF 88

Query: 106 DKPEKNKQWGKDSLFNKWCWENWLATCRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTL 165
           DKP+KNK+WGKD LF+KWCWENWLA CRKLKLDPFLTPY KINSRWIKDLNV+ KTIK L
Sbjct: 89  DKPDKNKKWGKDLLFSKWCWENWLAICRKLKLDPFLTPYMKINSRWIKDLNVKLKTIKIL 148

Query: 166 EENLGITLQDIGMGKDFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKWE 225
           EENLG T+QDIGMGKDFM KTPKA+ATKAKIDKWDLIKLKSF TAKE  IRVNRQPT+W+
Sbjct: 149 EENLGNTIQDIGMGKDFMMKTPKAIATKAKIDKWDLIKLKSFFTAKEIIIRVNRQPTEWK 208

Query: 226 KIFATYSSDKGLISRI 241
           KIFA Y SDKGLISRI
Sbjct: 209 KIFAIYPSDKGLISRI 224


>gi|239748922 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 224

 Score =  345 bits (886), Expect = 2e-95
 Identities = 162/196 (82%), Positives = 175/196 (89%)

Query: 46  KSILSQKNKAGGITLPDFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEITPHIYNYLIF 105
           K  L +KN AGGI LPDFKL+YKATVTKTAWYWYQNR IDQW+RTE SEI  H+YN+LIF
Sbjct: 29  KCSLMEKNTAGGIMLPDFKLHYKATVTKTAWYWYQNRHIDQWSRTETSEIKQHVYNHLIF 88

Query: 106 DKPEKNKQWGKDSLFNKWCWENWLATCRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTL 165
           DKP+KNK+WGKD LF+KWCWENWLA CRKLKLDPFLTPY KINSRWIKDLNV+ KTIK L
Sbjct: 89  DKPDKNKKWGKDLLFSKWCWENWLAICRKLKLDPFLTPYMKINSRWIKDLNVKLKTIKIL 148

Query: 166 EENLGITLQDIGMGKDFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKWE 225
           EENLG T+QDIGMGKDFM KTPKA+ATKAKIDKWDLIKLKSF TAKE  IRVNRQPT+W+
Sbjct: 149 EENLGNTIQDIGMGKDFMMKTPKAIATKAKIDKWDLIKLKSFFTAKEIIIRVNRQPTEWK 208

Query: 226 KIFATYSSDKGLISRI 241
           KIFA Y SDKGLISRI
Sbjct: 209 KIFAIYPSDKGLISRI 224


>gi|239742944 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 224

 Score =  345 bits (886), Expect = 2e-95
 Identities = 162/196 (82%), Positives = 175/196 (89%)

Query: 46  KSILSQKNKAGGITLPDFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEITPHIYNYLIF 105
           K  L +KN AGGI LPDFKL+YKATVTKTAWYWYQNR IDQW+RTE SEI  H+YN+LIF
Sbjct: 29  KCSLMEKNTAGGIMLPDFKLHYKATVTKTAWYWYQNRHIDQWSRTETSEIKQHVYNHLIF 88

Query: 106 DKPEKNKQWGKDSLFNKWCWENWLATCRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTL 165
           DKP+KNK+WGKD LF+KWCWENWLA CRKLKLDPFLTPY KINSRWIKDLNV+ KTIK L
Sbjct: 89  DKPDKNKKWGKDLLFSKWCWENWLAICRKLKLDPFLTPYMKINSRWIKDLNVKLKTIKIL 148

Query: 166 EENLGITLQDIGMGKDFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKWE 225
           EENLG T+QDIGMGKDFM KTPKA+ATKAKIDKWDLIKLKSF TAKE  IRVNRQPT+W+
Sbjct: 149 EENLGNTIQDIGMGKDFMMKTPKAIATKAKIDKWDLIKLKSFFTAKEIIIRVNRQPTEWK 208

Query: 226 KIFATYSSDKGLISRI 241
           KIFA Y SDKGLISRI
Sbjct: 209 KIFAIYPSDKGLISRI 224


>gi|239756280 PREDICTED: hypothetical protein XP_002344872 [Homo
           sapiens]
          Length = 283

 Score =  253 bits (647), Expect = 9e-68
 Identities = 117/126 (92%), Positives = 121/126 (96%)

Query: 1   MKMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRAHIAKSILSQKNKAGGITL 60
           +KMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRA IAKS LSQKNK GGITL
Sbjct: 156 VKMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRALIAKSSLSQKNKTGGITL 215

Query: 61  PDFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSLF 120
           PDFKLYYKATVTKT+WYWYQNRDIDQWNRTEPSEI PHIYNYLIFDKP+KNKQWGKDSLF
Sbjct: 216 PDFKLYYKATVTKTSWYWYQNRDIDQWNRTEPSEIMPHIYNYLIFDKPDKNKQWGKDSLF 275

Query: 121 NKWCWE 126
           NKW W+
Sbjct: 276 NKWWWK 281


>gi|239750807 PREDICTED: hypothetical protein XP_002347566 [Homo
           sapiens]
          Length = 283

 Score =  253 bits (647), Expect = 9e-68
 Identities = 117/126 (92%), Positives = 121/126 (96%)

Query: 1   MKMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRAHIAKSILSQKNKAGGITL 60
           +KMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRA IAKS LSQKNK GGITL
Sbjct: 156 VKMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRALIAKSSLSQKNKTGGITL 215

Query: 61  PDFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSLF 120
           PDFKLYYKATVTKT+WYWYQNRDIDQWNRTEPSEI PHIYNYLIFDKP+KNKQWGKDSLF
Sbjct: 216 PDFKLYYKATVTKTSWYWYQNRDIDQWNRTEPSEIMPHIYNYLIFDKPDKNKQWGKDSLF 275

Query: 121 NKWCWE 126
           NKW W+
Sbjct: 276 NKWWWK 281


>gi|239745167 PREDICTED: hypothetical protein XP_002343386 [Homo
           sapiens]
          Length = 283

 Score =  253 bits (647), Expect = 9e-68
 Identities = 117/126 (92%), Positives = 121/126 (96%)

Query: 1   MKMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRAHIAKSILSQKNKAGGITL 60
           +KMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRA IAKS LSQKNK GGITL
Sbjct: 156 VKMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRALIAKSSLSQKNKTGGITL 215

Query: 61  PDFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSLF 120
           PDFKLYYKATVTKT+WYWYQNRDIDQWNRTEPSEI PHIYNYLIFDKP+KNKQWGKDSLF
Sbjct: 216 PDFKLYYKATVTKTSWYWYQNRDIDQWNRTEPSEIMPHIYNYLIFDKPDKNKQWGKDSLF 275

Query: 121 NKWCWE 126
           NKW W+
Sbjct: 276 NKWWWK 281


>gi|239752486 PREDICTED: hypothetical protein XP_002347335 [Homo
           sapiens]
          Length = 137

 Score =  111 bits (278), Expect = 6e-25
 Identities = 55/80 (68%), Positives = 63/80 (78%), Gaps = 2/80 (2%)

Query: 178 MGKDFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGL 237
           MG+DF+++TPKAMAT+ KI KWDL KLKS C+AK+T IRVNRQPT+WE I A Y SDKGL
Sbjct: 1   MGRDFITRTPKAMATETKIYKWDLTKLKSICSAKDTIIRVNRQPTEWENIVAIYPSDKGL 60

Query: 238 ISRIYNELKQIYKKKTTPSK 257
           I RIY E  QIYKKK    K
Sbjct: 61  ICRIYKE--QIYKKKKNHQK 78


>gi|239754279 PREDICTED: hypothetical protein XP_002345940 [Homo
           sapiens]
          Length = 240

 Score = 51.2 bits (121), Expect = 9e-07
 Identities = 24/26 (92%), Positives = 24/26 (92%)

Query: 228 FATYSSDKGLISRIYNELKQIYKKKT 253
           F  YSSDKGLISRIYNELKQIYKKKT
Sbjct: 5   FCIYSSDKGLISRIYNELKQIYKKKT 30


>gi|239748812 PREDICTED: hypothetical protein XP_002346807 [Homo
           sapiens]
          Length = 240

 Score = 51.2 bits (121), Expect = 9e-07
 Identities = 24/26 (92%), Positives = 24/26 (92%)

Query: 228 FATYSSDKGLISRIYNELKQIYKKKT 253
           F  YSSDKGLISRIYNELKQIYKKKT
Sbjct: 5   FCIYSSDKGLISRIYNELKQIYKKKT 30


>gi|239740912 PREDICTED: hypothetical protein XP_002344084 [Homo
           sapiens]
          Length = 240

 Score = 51.2 bits (121), Expect = 9e-07
 Identities = 24/26 (92%), Positives = 24/26 (92%)

Query: 228 FATYSSDKGLISRIYNELKQIYKKKT 253
           F  YSSDKGLISRIYNELKQIYKKKT
Sbjct: 5   FCIYSSDKGLISRIYNELKQIYKKKT 30


>gi|239740849 PREDICTED: hypothetical protein XP_002344051 [Homo
           sapiens]
          Length = 240

 Score = 51.2 bits (121), Expect = 9e-07
 Identities = 24/26 (92%), Positives = 24/26 (92%)

Query: 228 FATYSSDKGLISRIYNELKQIYKKKT 253
           F  YSSDKGLISRIYNELKQIYKKKT
Sbjct: 5   FCIYSSDKGLISRIYNELKQIYKKKT 30


>gi|38570064 hypothetical protein LOC136895 [Homo sapiens]
          Length = 590

 Score = 31.2 bits (69), Expect = 0.96
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 5/43 (11%)

Query: 182 FMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKW 224
           F  K PK  A    ++ WD I     C+AKE  I+ N + + W
Sbjct: 240 FYPKPPKTFAPNTSLNSWDPI-----CSAKEANIQRNLERSHW 277


>gi|148491080 trinucleotide repeat containing 6B isoform 2 [Homo
           sapiens]
          Length = 1723

 Score = 30.4 bits (67), Expect = 1.6
 Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 4/40 (10%)

Query: 76  WYWYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWG 115
           W  Y+N +   W    P E TP  +N    + P K++ WG
Sbjct: 698 WNDYKNNNSSNWGGGRPDEKTPSSWN----ENPSKDQGWG 733


>gi|241982729 trinucleotide repeat containing 6B isoform 1 [Homo
           sapiens]
          Length = 1833

 Score = 30.4 bits (67), Expect = 1.6
 Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 4/40 (10%)

Query: 76  WYWYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWG 115
           W  Y+N +   W    P E TP  +N    + P K++ WG
Sbjct: 698 WNDYKNNNSSNWGGGRPDEKTPSSWN----ENPSKDQGWG 733


>gi|154813197 talpid3 protein [Homo sapiens]
          Length = 1472

 Score = 30.4 bits (67), Expect = 1.6
 Identities = 27/114 (23%), Positives = 49/114 (42%), Gaps = 15/114 (13%)

Query: 82  RDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSLFNKWCWENWLATCRKLKLDPFL 141
           + +D+W +T  +EI   +    +    +   Q     ++ K  ++   +T +K       
Sbjct: 538 KTVDEWIKTISAEIQGLLKATTVIQDEDYMLQ-----VYGKPVYQGHRSTLKK------- 585

Query: 142 TPYTKINSRWIKDLNVRPKTIKTLEENLGITLQDIGMGKDFMSKTPKAMATKAK 195
            PY + NS   K    RPK I+ ++   G  ++ I    DF +  PK M +K K
Sbjct: 586 GPYLRFNSPSPKSRPQRPKVIERVK---GTKVKSIRTQTDFYATKPKKMDSKMK 636


>gi|28626523 olfactory receptor, family 2, subfamily H, member 1
           [Homo sapiens]
          Length = 316

 Score = 30.4 bits (67), Expect = 1.6
 Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 1/56 (1%)

Query: 204 LKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLISRIYNELKQIYKKKTTPSKSG 259
           L S+    +  +R+N   T W K F T SS   +++  Y+ +  +Y +   P   G
Sbjct: 213 LASYGATAQAVLRIN-SATAWRKAFGTCSSHLTVVTLFYSSVIAVYLQPKNPYAQG 267


>gi|6912622 RAD54 homolog B [Homo sapiens]
          Length = 910

 Score = 30.0 bits (66), Expect = 2.1
 Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 19/92 (20%)

Query: 97  PHIYNYLIFDKPEKNKQWGKDSLFNKWCWENWLATCRKLKLDPFLT----PYTKINSRWI 152
           P+  N L+  +P+KN QW    +FNK C+         + +DP+L     P+ K    ++
Sbjct: 257 PYTPNSLVMPRPDKNHQW----VFNKNCF-----PLVDVVIDPYLVYHLRPHQKEGIIFL 307

Query: 153 KD------LNVRPKTIKTLEENLGITLQDIGM 178
            +      +N R   I   E  LG TLQ I +
Sbjct: 308 YECVMGMRMNGRCGAILADEMGLGKTLQCISL 339


>gi|42476164 POU class 2 homeobox 1 [Homo sapiens]
          Length = 743

 Score = 28.9 bits (63), Expect = 4.8
 Identities = 25/99 (25%), Positives = 48/99 (48%), Gaps = 13/99 (13%)

Query: 126 ENWLATCRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGITLQDIGMGKDFM-- 183
           E WL     L  D  L+  + +NS  I+ L+ R K   ++E N+ + L+     K F+  
Sbjct: 347 EKWLNDAENLSSDSSLSSPSALNSPGIEGLSRRRKKRTSIETNIRVALE-----KSFLEN 401

Query: 184 ----SKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVN 218
               S+    +A +  ++K ++I++  FC  ++   R+N
Sbjct: 402 QKPTSEEITMIADQLNMEK-EVIRV-WFCNRRQKEKRIN 438


>gi|148746183 ubiquitin specific protease 35 [Homo sapiens]
          Length = 1018

 Score = 28.5 bits (62), Expect = 6.2
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 196 IDKWDLIKLKSFCTAKETTIRVNRQPTKWEKIFA 229
           IDKW +  LK     K+ +I +    TK EK+F+
Sbjct: 282 IDKWIIALLKGLAAVKKFSILIEVSLTKIEKVFS 315


>gi|20806097 nucleolar complex associated 3 homolog [Homo sapiens]
          Length = 800

 Score = 28.5 bits (62), Expect = 6.2
 Identities = 28/110 (25%), Positives = 47/110 (42%), Gaps = 21/110 (19%)

Query: 119 LFNKWCWENWLATCRKLKLDPFLTPYTKINSRWIKDLN--VRPKTIKTLEENLGITLQDI 176
           L ++ C E      ++ KL        K+ S ++K  N  VRP+ +KT    L + ++++
Sbjct: 376 LISEMCCEAVKKLFKQDKLGQASLGVIKVISGFVKGRNYEVRPEMLKTF---LCLRIKEV 432

Query: 177 GMGKDFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKWEK 226
                           + K D  D+ K K F T KE    ++R   KW+K
Sbjct: 433 ----------------EVKKDTEDINKPKKFMTFKEKRKSLSRMQRKWKK 466


>gi|214830928 coiled-coil domain containing 113 isoform 2 [Homo
           sapiens]
          Length = 323

 Score = 28.1 bits (61), Expect = 8.1
 Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 3/80 (3%)

Query: 148 NSRWIKDLNVRPKTIKTLEENLGITLQDIGMGKDFMSKTPKAMATKAKIDKWDLIKLKSF 207
           N+++++ +  R + +  L+ + G TLQ +   K   SK  KAM     +DK  L++ +  
Sbjct: 175 NAQFLETIEARNQELTQLKLSSGNTLQVLNAYK---SKLHKAMEIYLNLDKEILLRKELL 231

Query: 208 CTAKETTIRVNRQPTKWEKI 227
              ++ T++V     K E +
Sbjct: 232 EKIEKETLQVEEDRAKAEAV 251


>gi|19923432 coiled-coil domain containing 113 isoform 1 [Homo
           sapiens]
          Length = 377

 Score = 28.1 bits (61), Expect = 8.1
 Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 3/80 (3%)

Query: 148 NSRWIKDLNVRPKTIKTLEENLGITLQDIGMGKDFMSKTPKAMATKAKIDKWDLIKLKSF 207
           N+++++ +  R + +  L+ + G TLQ +   K   SK  KAM     +DK  L++ +  
Sbjct: 229 NAQFLETIEARNQELTQLKLSSGNTLQVLNAYK---SKLHKAMEIYLNLDKEILLRKELL 285

Query: 208 CTAKETTIRVNRQPTKWEKI 227
              ++ T++V     K E +
Sbjct: 286 EKIEKETLQVEEDRAKAEAV 305


>gi|30795117 F-box only protein, helicase, 18 isoform 1 [Homo
           sapiens]
          Length = 1094

 Score = 28.1 bits (61), Expect = 8.1
 Identities = 17/80 (21%), Positives = 34/80 (42%), Gaps = 13/80 (16%)

Query: 92  PSEITPHIYNYLIFDKPEKNKQWGKDSLFNKWCWENWLATCRKLKLDPFLTPYTKINSRW 151
           PSE+  H++ +L    P ++  W    + + W         R++  DP   P+ K+  R+
Sbjct: 267 PSEVLRHVFAFL----PVEDLYWNLSLVCHLW---------REIISDPLFIPWKKLYHRY 313

Query: 152 IKDLNVRPKTIKTLEENLGI 171
           + +       +  +  N GI
Sbjct: 314 LMNEEQAVSKVDGILSNCGI 333


>gi|30795119 F-box only protein, helicase, 18 isoform 2 [Homo
           sapiens]
          Length = 1043

 Score = 28.1 bits (61), Expect = 8.1
 Identities = 17/80 (21%), Positives = 34/80 (42%), Gaps = 13/80 (16%)

Query: 92  PSEITPHIYNYLIFDKPEKNKQWGKDSLFNKWCWENWLATCRKLKLDPFLTPYTKINSRW 151
           PSE+  H++ +L    P ++  W    + + W         R++  DP   P+ K+  R+
Sbjct: 216 PSEVLRHVFAFL----PVEDLYWNLSLVCHLW---------REIISDPLFIPWKKLYHRY 262

Query: 152 IKDLNVRPKTIKTLEENLGI 171
           + +       +  +  N GI
Sbjct: 263 LMNEEQAVSKVDGILSNCGI 282


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.133    0.422 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,107,952
Number of Sequences: 37866
Number of extensions: 425410
Number of successful extensions: 931
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 911
Number of HSP's gapped (non-prelim): 30
length of query: 262
length of database: 18,247,518
effective HSP length: 100
effective length of query: 162
effective length of database: 14,460,918
effective search space: 2342668716
effective search space used: 2342668716
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.