Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239754787
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239754787 PREDICTED: hypothetical protein [Homo sapiens]
(179 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239754787 PREDICTED: hypothetical protein [Homo sapiens] 373 e-104
gi|239749297 PREDICTED: hypothetical protein XP_002346987 [Homo ... 373 e-104
gi|239743391 PREDICTED: hypothetical protein XP_002342836 [Homo ... 373 e-104
gi|239509088 PREDICTED: hypothetical protein [Homo sapiens] 373 e-104
gi|46409434 hypothetical protein LOC388759 [Homo sapiens] 37 0.012
gi|169206489 PREDICTED: hypothetical protein [Homo sapiens] 36 0.020
gi|169205942 PREDICTED: hypothetical protein [Homo sapiens] 36 0.020
gi|169206171 PREDICTED: hypothetical protein [Homo sapiens] 34 0.059
gi|239753721 PREDICTED: hypothetical protein [Homo sapiens] 34 0.059
gi|239748254 PREDICTED: hypothetical protein XP_002346600 [Homo ... 34 0.059
gi|239742155 PREDICTED: hypothetical protein XP_002342442 [Homo ... 34 0.059
gi|45387945 family with sequence similarity 62 (C2 domain contai... 33 0.17
gi|7705555 iroquois homeobox 4 [Homo sapiens] 32 0.22
gi|170932471 hypothetical protein LOC79703 [Homo sapiens] 32 0.29
gi|13376335 hypothetical protein LOC79946 [Homo sapiens] 32 0.29
gi|169164474 PREDICTED: hypothetical protein [Homo sapiens] 32 0.38
gi|239747958 PREDICTED: hypothetical protein isoform 4 [Homo sap... 32 0.38
gi|239741853 PREDICTED: hypothetical protein isoform 2 [Homo sap... 32 0.38
gi|239756562 PREDICTED: hypothetical protein [Homo sapiens] 31 0.50
gi|239753329 PREDICTED: hypothetical protein XP_002345623 [Homo ... 31 0.50
gi|239745977 PREDICTED: hypothetical protein XP_002343631 [Homo ... 31 0.65
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 31 0.65
gi|239756943 PREDICTED: hypothetical protein [Homo sapiens] 30 0.85
gi|239751443 PREDICTED: hypothetical protein [Homo sapiens] 30 0.85
gi|239745948 PREDICTED: hypothetical protein XP_002343622 [Homo ... 30 0.85
gi|239747677 PREDICTED: hypothetical protein [Homo sapiens] 30 1.1
gi|239741546 PREDICTED: hypothetical protein XP_002342233 [Homo ... 30 1.1
gi|190341082 HECT domain containing 2 isoform b [Homo sapiens] 30 1.1
gi|190341084 HECT domain containing 2 isoform a [Homo sapiens] 30 1.1
gi|119226260 calcium homeostasis endoplasmic reticulum protein [... 30 1.1
>gi|239754787 PREDICTED: hypothetical protein [Homo sapiens]
Length = 179
Score = 373 bits (957), Expect = e-104
Identities = 179/179 (100%), Positives = 179/179 (100%)
Query: 1 MRSAPAVIPTRPGEFVHQSLESASNSRLQPVTSTGHRSAPLEAGLLTGCVLMPGCSASQA 60
MRSAPAVIPTRPGEFVHQSLESASNSRLQPVTSTGHRSAPLEAGLLTGCVLMPGCSASQA
Sbjct: 1 MRSAPAVIPTRPGEFVHQSLESASNSRLQPVTSTGHRSAPLEAGLLTGCVLMPGCSASQA 60
Query: 61 SMELHSWSPCPDGFCTYRVLRSCPLCNCLTCSRPDGPEKENHGRSRKQLCAASQRVPREE 120
SMELHSWSPCPDGFCTYRVLRSCPLCNCLTCSRPDGPEKENHGRSRKQLCAASQRVPREE
Sbjct: 61 SMELHSWSPCPDGFCTYRVLRSCPLCNCLTCSRPDGPEKENHGRSRKQLCAASQRVPREE 120
Query: 121 RERAAGAWRRPTPSRAQASAAPLPGSHLERELRPRAISRGRGRTCGAGSSRRQQAPGAS 179
RERAAGAWRRPTPSRAQASAAPLPGSHLERELRPRAISRGRGRTCGAGSSRRQQAPGAS
Sbjct: 121 RERAAGAWRRPTPSRAQASAAPLPGSHLERELRPRAISRGRGRTCGAGSSRRQQAPGAS 179
>gi|239749297 PREDICTED: hypothetical protein XP_002346987 [Homo
sapiens]
Length = 179
Score = 373 bits (957), Expect = e-104
Identities = 179/179 (100%), Positives = 179/179 (100%)
Query: 1 MRSAPAVIPTRPGEFVHQSLESASNSRLQPVTSTGHRSAPLEAGLLTGCVLMPGCSASQA 60
MRSAPAVIPTRPGEFVHQSLESASNSRLQPVTSTGHRSAPLEAGLLTGCVLMPGCSASQA
Sbjct: 1 MRSAPAVIPTRPGEFVHQSLESASNSRLQPVTSTGHRSAPLEAGLLTGCVLMPGCSASQA 60
Query: 61 SMELHSWSPCPDGFCTYRVLRSCPLCNCLTCSRPDGPEKENHGRSRKQLCAASQRVPREE 120
SMELHSWSPCPDGFCTYRVLRSCPLCNCLTCSRPDGPEKENHGRSRKQLCAASQRVPREE
Sbjct: 61 SMELHSWSPCPDGFCTYRVLRSCPLCNCLTCSRPDGPEKENHGRSRKQLCAASQRVPREE 120
Query: 121 RERAAGAWRRPTPSRAQASAAPLPGSHLERELRPRAISRGRGRTCGAGSSRRQQAPGAS 179
RERAAGAWRRPTPSRAQASAAPLPGSHLERELRPRAISRGRGRTCGAGSSRRQQAPGAS
Sbjct: 121 RERAAGAWRRPTPSRAQASAAPLPGSHLERELRPRAISRGRGRTCGAGSSRRQQAPGAS 179
>gi|239743391 PREDICTED: hypothetical protein XP_002342836 [Homo
sapiens]
Length = 179
Score = 373 bits (957), Expect = e-104
Identities = 179/179 (100%), Positives = 179/179 (100%)
Query: 1 MRSAPAVIPTRPGEFVHQSLESASNSRLQPVTSTGHRSAPLEAGLLTGCVLMPGCSASQA 60
MRSAPAVIPTRPGEFVHQSLESASNSRLQPVTSTGHRSAPLEAGLLTGCVLMPGCSASQA
Sbjct: 1 MRSAPAVIPTRPGEFVHQSLESASNSRLQPVTSTGHRSAPLEAGLLTGCVLMPGCSASQA 60
Query: 61 SMELHSWSPCPDGFCTYRVLRSCPLCNCLTCSRPDGPEKENHGRSRKQLCAASQRVPREE 120
SMELHSWSPCPDGFCTYRVLRSCPLCNCLTCSRPDGPEKENHGRSRKQLCAASQRVPREE
Sbjct: 61 SMELHSWSPCPDGFCTYRVLRSCPLCNCLTCSRPDGPEKENHGRSRKQLCAASQRVPREE 120
Query: 121 RERAAGAWRRPTPSRAQASAAPLPGSHLERELRPRAISRGRGRTCGAGSSRRQQAPGAS 179
RERAAGAWRRPTPSRAQASAAPLPGSHLERELRPRAISRGRGRTCGAGSSRRQQAPGAS
Sbjct: 121 RERAAGAWRRPTPSRAQASAAPLPGSHLERELRPRAISRGRGRTCGAGSSRRQQAPGAS 179
>gi|239509088 PREDICTED: hypothetical protein [Homo sapiens]
Length = 179
Score = 373 bits (957), Expect = e-104
Identities = 179/179 (100%), Positives = 179/179 (100%)
Query: 1 MRSAPAVIPTRPGEFVHQSLESASNSRLQPVTSTGHRSAPLEAGLLTGCVLMPGCSASQA 60
MRSAPAVIPTRPGEFVHQSLESASNSRLQPVTSTGHRSAPLEAGLLTGCVLMPGCSASQA
Sbjct: 1 MRSAPAVIPTRPGEFVHQSLESASNSRLQPVTSTGHRSAPLEAGLLTGCVLMPGCSASQA 60
Query: 61 SMELHSWSPCPDGFCTYRVLRSCPLCNCLTCSRPDGPEKENHGRSRKQLCAASQRVPREE 120
SMELHSWSPCPDGFCTYRVLRSCPLCNCLTCSRPDGPEKENHGRSRKQLCAASQRVPREE
Sbjct: 61 SMELHSWSPCPDGFCTYRVLRSCPLCNCLTCSRPDGPEKENHGRSRKQLCAASQRVPREE 120
Query: 121 RERAAGAWRRPTPSRAQASAAPLPGSHLERELRPRAISRGRGRTCGAGSSRRQQAPGAS 179
RERAAGAWRRPTPSRAQASAAPLPGSHLERELRPRAISRGRGRTCGAGSSRRQQAPGAS
Sbjct: 121 RERAAGAWRRPTPSRAQASAAPLPGSHLERELRPRAISRGRGRTCGAGSSRRQQAPGAS 179
>gi|46409434 hypothetical protein LOC388759 [Homo sapiens]
Length = 237
Score = 36.6 bits (83), Expect = 0.012
Identities = 19/50 (38%), Positives = 26/50 (52%)
Query: 97 PEKENHGRSRKQLCAASQRVPREERERAAGAWRRPTPSRAQASAAPLPGS 146
P + SR CA+S R RE+++R AG P+P+ A P PGS
Sbjct: 101 PAAASRSGSRTLRCASSDRSLREQKQRRAGPDPTPSPAPPPAGPRPSPGS 150
>gi|169206489 PREDICTED: hypothetical protein [Homo sapiens]
Length = 564
Score = 35.8 bits (81), Expect = 0.020
Identities = 33/96 (34%), Positives = 40/96 (41%), Gaps = 9/96 (9%)
Query: 89 LTCSRP-DGPEKENHGRSRKQLCAASQRVPREERERAAG------AWRRPTPSRAQASAA 141
LT RP D E G SR++ + ++ R R A A P PS AQ+
Sbjct: 76 LTTRRPRDAGEAAVSGPSRQRRTSRARTALWGRRSRRAAGPGLDCAGSAPAPSGAQSCGG 135
Query: 142 PLPGSHLERELRPRAISRGRGRTCGAGSSRRQQAPG 177
P P S L R L S G GR G+ S R PG
Sbjct: 136 PAPASALRRPLTQWDASGGGGR--GSHSGPRAGTPG 169
>gi|169205942 PREDICTED: hypothetical protein [Homo sapiens]
Length = 564
Score = 35.8 bits (81), Expect = 0.020
Identities = 33/96 (34%), Positives = 40/96 (41%), Gaps = 9/96 (9%)
Query: 89 LTCSRP-DGPEKENHGRSRKQLCAASQRVPREERERAAG------AWRRPTPSRAQASAA 141
LT RP D E G SR++ + ++ R R A A P PS AQ+
Sbjct: 76 LTTRRPRDAGEAAVSGPSRQRRTSRARTALWGRRSRRAAGPGLDCAGSAPAPSGAQSCGG 135
Query: 142 PLPGSHLERELRPRAISRGRGRTCGAGSSRRQQAPG 177
P P S L R L S G GR G+ S R PG
Sbjct: 136 PAPASALRRPLTQWDASGGGGR--GSHSGPRAGTPG 169
>gi|169206171 PREDICTED: hypothetical protein [Homo sapiens]
Length = 466
Score = 34.3 bits (77), Expect = 0.059
Identities = 33/106 (31%), Positives = 43/106 (40%), Gaps = 22/106 (20%)
Query: 89 LTCSRP-DGPEKENHGRSRKQLCAASQRVPREERERAAG------AWRRPTPSRAQASAA 141
LT RP D E G SR++ + ++ R R A A P PS AQ+
Sbjct: 76 LTTRRPRDAGEAAVSGPSRQRRTSRARTALWGRRSRRAAGPGLDCAGSAPAPSGAQSCGG 135
Query: 142 PLPGSHLERELR---------------PRAISRGRGRTCGAGSSRR 172
P P S L R L PRA + G GR+ AG+ R+
Sbjct: 136 PAPASALRRPLTQWDASGGGGRASHSGPRAGTPGGGRSSRAGARRK 181
>gi|239753721 PREDICTED: hypothetical protein [Homo sapiens]
Length = 342
Score = 34.3 bits (77), Expect = 0.059
Identities = 44/165 (26%), Positives = 57/165 (34%), Gaps = 16/165 (9%)
Query: 19 SLESASNSRLQPVTSTGHRSAPLEAGLLTGCVLMPGCSASQASMELHSWSPCPDGFCTYR 78
SL +A++ R P G S G G +L PG WSP P
Sbjct: 111 SLRAAAHHRHNPGRRRGGGSPAAREGDAAGWLLAPGLGPRLRGGR-GGWSPAPKAGSPMA 169
Query: 79 VLRSCPLCNCLTCSR----PDGPEKENHGRSRKQLCA--ASQRVPREERERAAGAWRRPT 132
T R PD P R+R LCA AS+R P G RP
Sbjct: 170 AAPGRTCEGKRTAPRRMLLPDSPYAGRPQRARTSLCAAPASRRPPAPTVAAPRGLETRPA 229
Query: 133 -PSRAQASAAPLPGSHLERELRPRAISRGRGRTCGAGSSRRQQAP 176
P RA A+ G L ++ R G+G+ R ++ P
Sbjct: 230 LPRRAGAAVHGSEGLALR--------AKRRDANAGSGARRCRELP 266
>gi|239748254 PREDICTED: hypothetical protein XP_002346600 [Homo
sapiens]
Length = 342
Score = 34.3 bits (77), Expect = 0.059
Identities = 44/165 (26%), Positives = 57/165 (34%), Gaps = 16/165 (9%)
Query: 19 SLESASNSRLQPVTSTGHRSAPLEAGLLTGCVLMPGCSASQASMELHSWSPCPDGFCTYR 78
SL +A++ R P G S G G +L PG WSP P
Sbjct: 111 SLRAAAHHRHNPGRRRGGGSPAAREGDAAGWLLAPGLGPRLRGGR-GGWSPAPKAGSPMA 169
Query: 79 VLRSCPLCNCLTCSR----PDGPEKENHGRSRKQLCA--ASQRVPREERERAAGAWRRPT 132
T R PD P R+R LCA AS+R P G RP
Sbjct: 170 AAPGRTCEGKRTAPRRMLLPDSPYAGRPQRARTSLCAAPASRRPPAPTVAAPRGLETRPA 229
Query: 133 -PSRAQASAAPLPGSHLERELRPRAISRGRGRTCGAGSSRRQQAP 176
P RA A+ G L ++ R G+G+ R ++ P
Sbjct: 230 LPRRAGAAVHGSEGLALR--------AKRRDANAGSGARRCRELP 266
>gi|239742155 PREDICTED: hypothetical protein XP_002342442 [Homo
sapiens]
Length = 342
Score = 34.3 bits (77), Expect = 0.059
Identities = 44/165 (26%), Positives = 57/165 (34%), Gaps = 16/165 (9%)
Query: 19 SLESASNSRLQPVTSTGHRSAPLEAGLLTGCVLMPGCSASQASMELHSWSPCPDGFCTYR 78
SL +A++ R P G S G G +L PG WSP P
Sbjct: 111 SLRAAAHHRHNPGRRRGGGSPAAREGDAAGWLLAPGLGPRLRGGR-GGWSPAPKAGSPMA 169
Query: 79 VLRSCPLCNCLTCSR----PDGPEKENHGRSRKQLCA--ASQRVPREERERAAGAWRRPT 132
T R PD P R+R LCA AS+R P G RP
Sbjct: 170 AAPGRTCEGKRTAPRRMLLPDSPYAGRPQRARTSLCAAPASRRPPAPTVAAPRGLETRPA 229
Query: 133 -PSRAQASAAPLPGSHLERELRPRAISRGRGRTCGAGSSRRQQAP 176
P RA A+ G L ++ R G+G+ R ++ P
Sbjct: 230 LPRRAGAAVHGSEGLALR--------AKRRDANAGSGARRCRELP 266
>gi|45387945 family with sequence similarity 62 (C2 domain
containing) member B [Homo sapiens]
Length = 893
Score = 32.7 bits (73), Expect = 0.17
Identities = 22/72 (30%), Positives = 27/72 (37%), Gaps = 6/72 (8%)
Query: 105 SRKQLCAASQRVPREERERAAGAWRRPTPSRAQASAAPLPGSHLERELRPRAISRGRGRT 164
SR + RVP E G WR P AS P R + +RG G
Sbjct: 5 SRAEAGVRRSRVPSE------GRWRGAEPPGISASTQPASAGRAARHCGAMSGARGEGPE 58
Query: 165 CGAGSSRRQQAP 176
GAG + + AP
Sbjct: 59 AGAGGAGGRAAP 70
>gi|7705555 iroquois homeobox 4 [Homo sapiens]
Length = 519
Score = 32.3 bits (72), Expect = 0.22
Identities = 21/53 (39%), Positives = 23/53 (43%), Gaps = 5/53 (9%)
Query: 94 PDGPEKENHGRSRKQLCAASQRVPREERERAAGAWRRPTPSRAQASAAPLPGS 146
PDGP KE G R L A E+ ERA R A A PLPG+
Sbjct: 293 PDGPVKEASGALRMSLAAGGGAALDEDLERARSCLR-----SAAAGPEPLPGA 340
>gi|170932471 hypothetical protein LOC79703 [Homo sapiens]
Length = 677
Score = 32.0 bits (71), Expect = 0.29
Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
Query: 117 PREERERAAGAWRRPTPS-----RAQASAAPL-PGSHLERELRPRAISRGR 161
PR E RA + R P+PS R +A+AAPL P RE RA++ GR
Sbjct: 598 PRIEEMRALRSARAPSPSEAAPRRPEATAAPLTPRGREHREAHGRALAPGR 648
>gi|13376335 hypothetical protein LOC79946 [Homo sapiens]
Length = 257
Score = 32.0 bits (71), Expect = 0.29
Identities = 52/160 (32%), Positives = 59/160 (36%), Gaps = 22/160 (13%)
Query: 21 ESASNSRLQPVTS---TGHRSAPLEAGLLTG---CVLMPGCSASQAS-MELHSWSPCPDG 73
E S SR P +G AP + G C+ G ++AS S SP P
Sbjct: 13 EPRSGSRRLPKAEGDKSGSAGAPSKNSSRLGGRPCMCTAGRRPNRASGRRRRSCSPAPTW 72
Query: 74 --FCTYRVLR-SCPLCNCLTCSRPDGPEKENHGRSRKQLCAASQRVPREERE-RAAGAWR 129
C Y R + C R G HG + AS PR R R G
Sbjct: 73 PPLCCYPQSRPTASAAGPGACMRASG---RPHGNT-----TASTAPPRHPRPRRPGGPAL 124
Query: 130 RPTPSRAQASAAPLPGSHLERELRPRAISRG--RGRTCGA 167
RPTP R A AP P S R RPR R RGR GA
Sbjct: 125 RPTP-RPCAGPAPPPASRDCRCRRPRRWPRAGRRGRRAGA 163
>gi|169164474 PREDICTED: hypothetical protein [Homo sapiens]
Length = 259
Score = 31.6 bits (70), Expect = 0.38
Identities = 19/52 (36%), Positives = 21/52 (40%), Gaps = 4/52 (7%)
Query: 128 WRRPTPSRAQASAAPLPGSHLERELRPRAISRGRGRTCGAGSSRRQQAPGAS 179
W P R A A PLP ER+ RP GRG S PGA+
Sbjct: 108 WAVALPHRPSALAGPLPSQTAERQARPLVRELGRGSAAAGCPS----LPGAT 155
>gi|239747958 PREDICTED: hypothetical protein isoform 4 [Homo
sapiens]
Length = 259
Score = 31.6 bits (70), Expect = 0.38
Identities = 19/52 (36%), Positives = 21/52 (40%), Gaps = 4/52 (7%)
Query: 128 WRRPTPSRAQASAAPLPGSHLERELRPRAISRGRGRTCGAGSSRRQQAPGAS 179
W P R A A PLP ER+ RP GRG S PGA+
Sbjct: 108 WAVALPHRPSALAGPLPSQTAERQARPLVRELGRGSAAAGCPS----LPGAT 155
>gi|239741853 PREDICTED: hypothetical protein isoform 2 [Homo
sapiens]
Length = 259
Score = 31.6 bits (70), Expect = 0.38
Identities = 19/52 (36%), Positives = 21/52 (40%), Gaps = 4/52 (7%)
Query: 128 WRRPTPSRAQASAAPLPGSHLERELRPRAISRGRGRTCGAGSSRRQQAPGAS 179
W P R A A PLP ER+ RP GRG S PGA+
Sbjct: 108 WAVALPHRPSALAGPLPSQTAERQARPLVRELGRGSAAAGCPS----LPGAT 155
>gi|239756562 PREDICTED: hypothetical protein [Homo sapiens]
Length = 235
Score = 31.2 bits (69), Expect = 0.50
Identities = 25/107 (23%), Positives = 44/107 (41%), Gaps = 6/107 (5%)
Query: 78 RVLRSCPLCNCLTCSRPDGPEKENHGRSRKQLCAASQRVPREERERAAGAWRR------P 131
RV + P T S P ++ GR+ ++C + + ++ A+GA RR P
Sbjct: 99 RVGKGPPSRESWTRSAPQRCPSQDAGRAGSRVCRSRPQSRGGQKAAASGAKRRGVGGKEP 158
Query: 132 TPSRAQASAAPLPGSHLERELRPRAISRGRGRTCGAGSSRRQQAPGA 178
+ A+ A G ++ R R + G G ++ Q+A A
Sbjct: 159 RRQKPAAAGAKSRGGKSHKKPRRRGQKAAPAKNSGGGGNKPQKAAAA 205
>gi|239753329 PREDICTED: hypothetical protein XP_002345623 [Homo
sapiens]
Length = 351
Score = 31.2 bits (69), Expect = 0.50
Identities = 29/118 (24%), Positives = 47/118 (39%), Gaps = 9/118 (7%)
Query: 66 SWSPCPDGFCTYRVLRSCP--LCNCLTCSRPDGPEKENHGRSRKQLCAASQ----RVPRE 119
SW+ C Y+ +C +R G +K R R Q A S+ + PR
Sbjct: 109 SWTRSAPRRCPYQDASRAGSRVCRSRPQNRGGGDKKP---RRRGQKAAKSRGGGGKKPRG 165
Query: 120 ERERAAGAWRRPTPSRAQASAAPLPGSHLERELRPRAISRGRGRTCGAGSSRRQQAPG 177
++ AGA + P R AA G L++ ++ G +T AG + ++ G
Sbjct: 166 QKAAGAGAKKHRKPRRRGERAAAAGGKKLQKAAAAKSRGGGGKKTAAAGGKKPRRRRG 223
>gi|239745977 PREDICTED: hypothetical protein XP_002343631 [Homo
sapiens]
Length = 177
Score = 30.8 bits (68), Expect = 0.65
Identities = 15/29 (51%), Positives = 19/29 (65%)
Query: 130 RPTPSRAQASAAPLPGSHLERELRPRAIS 158
RP S A ++AP P SHL +LRPR +S
Sbjct: 77 RPGLSVAGKASAPRPASHLYSKLRPRLVS 105
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 30.8 bits (68), Expect = 0.65
Identities = 30/90 (33%), Positives = 35/90 (38%), Gaps = 13/90 (14%)
Query: 92 SRPDGPEKENHGRSRKQLCAASQRVPREERERAAGAW-RRPTPSRAQASAAP-LPGSHLE 149
SR P K H RSR P+ R R+A W R +P R S +P PG
Sbjct: 495 SRSRTPTKRGHSRSRS---------PQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRS 545
Query: 150 RELRPRAISRGRGRTCGAGSSRRQQAPGAS 179
R + R SR R G SR G S
Sbjct: 546 RNTQRRGRSRSARR--GRSHSRSPATRGRS 573
Score = 29.3 bits (64), Expect = 1.9
Identities = 21/87 (24%), Positives = 33/87 (37%), Gaps = 7/87 (8%)
Query: 84 PLCNCLTCSRPDGPEKENHGRSRKQLCAASQRVPREERERAAGAWRRPTPSRAQASA--- 140
PL P P E + + +++P+ ++ +PT AS+
Sbjct: 380 PLATTPLSQEPVNPPSEASPTRDRSPPKSPEKLPQSSSSESSPPSPQPTKVSRHASSSPE 439
Query: 141 ----APLPGSHLERELRPRAISRGRGR 163
AP PGSH E P + +R GR
Sbjct: 440 SPKPAPAPGSHREISSSPTSKNRSHGR 466
Score = 27.7 bits (60), Expect = 5.5
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 97 PEKENHGRSRKQLCAASQRVPREERERAAGA-----WRRPTPSRAQASAAPLPGSHLERE 151
P ++ R+ + R P R+R+ W+R SR++AS P +H
Sbjct: 1825 PARQESSRTSSRRRRGRSRTPPTSRKRSRSRTSPAPWKR---SRSRAS----PATHRRSR 1877
Query: 152 LRPRAISRGRGRTCGAGSSRRQ 173
R ISR R R+ + SRR+
Sbjct: 1878 SRTPLISRRRSRSRTSPVSRRR 1899
>gi|239756943 PREDICTED: hypothetical protein [Homo sapiens]
Length = 783
Score = 30.4 bits (67), Expect = 0.85
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
Query: 123 RAAGAWRRPTP-----SRAQASAAPLPGSHLERELRPRAISRG 160
R AG W RP P +RA PLPG+ E ++SRG
Sbjct: 522 RGAGRWARPGPGWDGGARAGTQGLPLPGTEAEPGALGCSLSRG 564
>gi|239751443 PREDICTED: hypothetical protein [Homo sapiens]
Length = 783
Score = 30.4 bits (67), Expect = 0.85
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
Query: 123 RAAGAWRRPTP-----SRAQASAAPLPGSHLERELRPRAISRG 160
R AG W RP P +RA PLPG+ E ++SRG
Sbjct: 522 RGAGRWARPGPGWDGGARAGTQGLPLPGTEAEPGALGCSLSRG 564
>gi|239745948 PREDICTED: hypothetical protein XP_002343622 [Homo
sapiens]
Length = 791
Score = 30.4 bits (67), Expect = 0.85
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
Query: 123 RAAGAWRRPTP-----SRAQASAAPLPGSHLERELRPRAISRG 160
R AG W RP P +RA PLPG+ E ++SRG
Sbjct: 530 RGAGRWARPGPGWDGGARAGTQGLPLPGTEAEPGALGCSLSRG 572
>gi|239747677 PREDICTED: hypothetical protein [Homo sapiens]
Length = 262
Score = 30.0 bits (66), Expect = 1.1
Identities = 17/45 (37%), Positives = 21/45 (46%)
Query: 131 PTPSRAQASAAPLPGSHLERELRPRAISRGRGRTCGAGSSRRQQA 175
P PS A+ S AP P + LR R RGR C +R +A
Sbjct: 49 PGPSNARRSFAPFPLENWISYLRGRGSRSERGRECACARARLARA 93
>gi|239741546 PREDICTED: hypothetical protein XP_002342233 [Homo
sapiens]
Length = 262
Score = 30.0 bits (66), Expect = 1.1
Identities = 17/45 (37%), Positives = 21/45 (46%)
Query: 131 PTPSRAQASAAPLPGSHLERELRPRAISRGRGRTCGAGSSRRQQA 175
P PS A+ S AP P + LR R RGR C +R +A
Sbjct: 49 PGPSNARRSFAPFPLENWISYLRGRGSRSERGRECACARARLARA 93
>gi|190341082 HECT domain containing 2 isoform b [Homo sapiens]
Length = 207
Score = 30.0 bits (66), Expect = 1.1
Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 4/52 (7%)
Query: 127 AWRRPTPSRAQASAAPLP----GSHLERELRPRAISRGRGRTCGAGSSRRQQ 174
A R P+P+ AAP P G ERE P +S G G T G + Q
Sbjct: 4 AVRVPSPATPLVVAAPAPEERKGKESEREKLPPIVSAGAGATAGLDRGAKGQ 55
>gi|190341084 HECT domain containing 2 isoform a [Homo sapiens]
Length = 776
Score = 30.0 bits (66), Expect = 1.1
Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 4/52 (7%)
Query: 127 AWRRPTPSRAQASAAPLP----GSHLERELRPRAISRGRGRTCGAGSSRRQQ 174
A R P+P+ AAP P G ERE P +S G G T G + Q
Sbjct: 4 AVRVPSPATPLVVAAPAPEERKGKESEREKLPPIVSAGAGATAGLDRGAKGQ 55
>gi|119226260 calcium homeostasis endoplasmic reticulum protein
[Homo sapiens]
Length = 916
Score = 30.0 bits (66), Expect = 1.1
Identities = 31/123 (25%), Positives = 48/123 (39%), Gaps = 6/123 (4%)
Query: 56 SASQASMELHSWSPCPDGFCTYRVLRSCPLCNCLTCSRPDGPEKENHGRSRKQLCAASQR 115
S ++S +S S G + RSC + SR + + RSR Q + S+
Sbjct: 745 SRGRSSSRSNSRSSKSSGSYSRSRSRSCSRSYSRSRSRSRSRSRSSRSRSRSQSRSRSKS 804
Query: 116 VPREERERAAGAWRRPTPSRAQA----SAAPLPGSHLERELRPRAISRGRGRTCGAGSSR 171
R R+ R PTP + SA P+P S L E + + G + G
Sbjct: 805 YSPGRRRRSRS--RSPTPPSSAGLGSNSAPPIPDSRLGEENKGHQMLVKMGWSGSGGLGA 862
Query: 172 RQQ 174
++Q
Sbjct: 863 KEQ 865
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.129 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,774,172
Number of Sequences: 37866
Number of extensions: 458845
Number of successful extensions: 2284
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 129
Number of HSP's that attempted gapping in prelim test: 2180
Number of HSP's gapped (non-prelim): 232
length of query: 179
length of database: 18,247,518
effective HSP length: 96
effective length of query: 83
effective length of database: 14,612,382
effective search space: 1212827706
effective search space used: 1212827706
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.