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Search of human proteins with 239754740
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239754740 PREDICTED: similar to hCG2039506 [Homo sapiens]
(170 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239754740 PREDICTED: similar to hCG2039506 [Homo sapiens] 342 1e-94
gi|239749275 PREDICTED: hypothetical protein XP_002346976 [Homo ... 56 2e-08
gi|239754728 PREDICTED: similar to hCG1737376 [Homo sapiens] 54 5e-08
gi|239754730 PREDICTED: similar to hCG1737378 [Homo sapiens] 50 7e-07
gi|169218204 PREDICTED: similar to pre-B lymphocyte gene 1 [Homo... 50 7e-07
gi|239743839 PREDICTED: hypothetical protein XP_002342967 [Homo ... 50 1e-06
gi|239755286 PREDICTED: similar to hCG1742442 [Homo sapiens] 49 3e-06
gi|169194776 PREDICTED: similar to hCG1742442 [Homo sapiens] 49 3e-06
gi|169167318 PREDICTED: similar to hCG2042707 [Homo sapiens] 49 3e-06
gi|169190399 PREDICTED: similar to hCG1742442 [Homo sapiens] 49 3e-06
gi|169174843 PREDICTED: similar to hCG1742442 [Homo sapiens] 49 3e-06
gi|239754726 PREDICTED: similar to hCG2002986 [Homo sapiens] 47 8e-06
gi|239741653 PREDICTED: hypothetical protein XP_002342271 [Homo ... 47 1e-05
gi|169163335 PREDICTED: similar to hCG1742442 [Homo sapiens] 46 1e-05
gi|169163724 PREDICTED: similar to hCG26659 [Homo sapiens] 46 2e-05
gi|239747852 PREDICTED: hypothetical protein XP_002346449 [Homo ... 46 2e-05
gi|169163023 PREDICTED: similar to hCG26659 [Homo sapiens] 46 2e-05
gi|239754736 PREDICTED: similar to hCG2039503 [Homo sapiens] 45 2e-05
gi|239758119 PREDICTED: similar to hCG2042717 [Homo sapiens] 45 3e-05
gi|239754742 PREDICTED: similar to hCG2002958 [Homo sapiens] 45 4e-05
gi|239749273 PREDICTED: similar to hCG2039484 [Homo sapiens] 45 4e-05
gi|239745527 PREDICTED: hypothetical protein XP_002343511 [Homo ... 45 4e-05
gi|169217390 PREDICTED: similar to hCG1742442 [Homo sapiens] 42 2e-04
gi|169217347 PREDICTED: similar to hCG1742442 [Homo sapiens] 42 2e-04
gi|239754738 PREDICTED: similar to hCG2039504 [Homo sapiens] 41 4e-04
gi|169163270 PREDICTED: similar to hCG2043206 [Homo sapiens] 41 4e-04
gi|239753214 PREDICTED: similar to hCG2043206 [Homo sapiens] 41 6e-04
gi|239754744 PREDICTED: similar to hCG2043257 [Homo sapiens] 40 7e-04
gi|239750750 PREDICTED: hypothetical protein XP_002347524 [Homo ... 40 7e-04
gi|239754734 PREDICTED: similar to hCG2002964 [Homo sapiens] 40 0.001
>gi|239754740 PREDICTED: similar to hCG2039506 [Homo sapiens]
Length = 170
Score = 342 bits (876), Expect = 1e-94
Identities = 170/170 (100%), Positives = 170/170 (100%)
Query: 1 MEAVVTTLPREGGVRPSRKMLLLLLLLGPGSGLGAVVSQHPSWVICKSGTSVKIECRSLD 60
MEAVVTTLPREGGVRPSRKMLLLLLLLGPGSGLGAVVSQHPSWVICKSGTSVKIECRSLD
Sbjct: 1 MEAVVTTLPREGGVRPSRKMLLLLLLLGPGSGLGAVVSQHPSWVICKSGTSVKIECRSLD 60
Query: 61 FQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPE 120
FQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPE
Sbjct: 61 FQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPE 120
Query: 121 DSSFYICSARDTAPGGDQTPRQEPLQLPSAPAGPLSAERGSVENGKPQLS 170
DSSFYICSARDTAPGGDQTPRQEPLQLPSAPAGPLSAERGSVENGKPQLS
Sbjct: 121 DSSFYICSARDTAPGGDQTPRQEPLQLPSAPAGPLSAERGSVENGKPQLS 170
>gi|239749275 PREDICTED: hypothetical protein XP_002346976 [Homo
sapiens]
Length = 245
Score = 55.8 bits (133), Expect = 2e-08
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Query: 34 GAVVSQHPSWVICKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQ 93
GA VSQ PS + + G V++ C + T ++WYRQ Q L + +G+ A +
Sbjct: 100 GAGVSQSPSNKVTEKGKDVELRCDPISGH-TALYWYRQSLGQGLEFLIYF-QGNSAPDKS 157
Query: 94 GVEKDKFLINHASLTLSTLTVTSAHPEDSSFYICSA 129
G+ D+F ++STLT+ EDS+ Y+C++
Sbjct: 158 GLPSDRFSAERTGGSVSTLTIQRTQQEDSAVYLCAS 193
>gi|239754728 PREDICTED: similar to hCG1737376 [Homo sapiens]
Length = 170
Score = 54.3 bits (129), Expect = 5e-08
Identities = 40/124 (32%), Positives = 60/124 (48%), Gaps = 4/124 (3%)
Query: 22 LLLLLLGPGSGLGAVVSQHPSWVICKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMA 81
++L LLG + A V+Q P + + G V + C+ + T+FWYRQ Q L L+A
Sbjct: 9 VVLCLLGEEL-IDARVTQTPRHKVTEMGQEVTMRCQPI-LGHNTVFWYRQTMMQGLELLA 66
Query: 82 TSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPEDSSFYIC-SARDTAPGGDQTP 140
+ + G+ KD+F TL+TL + + P DS+ Y C S TA P
Sbjct: 67 YFRNRAPLD-DSGMPKDRFSAEMPDATLATLKIQPSEPRDSAVYFCASGLVTALQNHLLP 125
Query: 141 RQEP 144
Q+P
Sbjct: 126 VQKP 129
>gi|239754730 PREDICTED: similar to hCG1737378 [Homo sapiens]
Length = 179
Score = 50.4 bits (119), Expect = 7e-07
Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 3/114 (2%)
Query: 20 MLLLLLLLGPGSGLGAVVSQHPSWVICKSGTSVKIECRSLDFQATTMFWYRQFPKQSLML 79
M +L L P + A V+Q PS + + G +V + C + ++WYR+ + +
Sbjct: 1 MSCILFLSLPTEHIEAGVTQFPSHSVIEKGQTVTLRCDPISGH-DNLYWYRRVMGKEIKF 59
Query: 80 MATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPEDSSFYIC-SARDT 132
+ + SK E G+ ++FL T STL V A EDS Y C S++DT
Sbjct: 60 LLHFVKESKQD-ESGMPNNRFLAERTGGTYSTLKVQPAELEDSGVYFCASSQDT 112
>gi|169218204 PREDICTED: similar to pre-B lymphocyte gene 1 [Homo
sapiens]
Length = 123
Score = 50.4 bits (119), Expect = 7e-07
Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 6/121 (4%)
Query: 14 VRPSRKMLLLLLLLGPGSGLGAVVSQHPSWVICKSGTSVKIECRSLDFQATTMFWYRQFP 73
+R ++L LLLL PG+ ++Q PS++ G V I CR+ ++ + WY+Q P
Sbjct: 3 MRVPAQLLGLLLLWLPGARCDIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKP 62
Query: 74 KQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPEDSSFYICSARDTA 133
++ L+ + +T + GV S T TLT++S PED + Y C ++
Sbjct: 63 GKAPKLLIY----AASTLQSGVPSR--FSGSGSGTEFTLTISSLQPEDFATYYCQQLNSY 116
Query: 134 P 134
P
Sbjct: 117 P 117
>gi|239743839 PREDICTED: hypothetical protein XP_002342967 [Homo
sapiens]
Length = 761
Score = 49.7 bits (117), Expect = 1e-06
Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 9/124 (7%)
Query: 14 VRPSRKMLLLLLLLG---PGSGLGAVVSQHPSWVICKSGTSVKIECRSLDFQATTMFWYR 70
VR ++L LL LLG PG+ ++Q PS + G V I CR+ + + WY+
Sbjct: 636 VRAPTQLLGLLGLLGLWLPGARCDIQMTQSPSSLSASVGGRVTITCRASQGISNNLNWYQ 695
Query: 71 QFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPEDSSFYICSAR 130
Q P+++ L+ + ++ + G+ + S T TLT++S PED + Y C
Sbjct: 696 QKPRKTPKLLIY----AASSLQSGIPSR--FSDSGSGTDYTLTISSLQPEDFATYYCQQS 749
Query: 131 DTAP 134
D+ P
Sbjct: 750 DSNP 753
>gi|239755286 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 296
Score = 48.5 bits (114), Expect = 3e-06
Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 9/130 (6%)
Query: 6 TTLPREGG---VRPSRKMLLLLLLLGPGSGLGAVVSQHPSWVICKSGTSVKIECRSLDFQ 62
T+ P+ G VR ++L LL+L PG+ ++Q PS + G V I CR+
Sbjct: 163 TSQPQSGHSTEVRAPTQLLGLLVLWLPGARCDIQMTQSPSSLSASVGDRVTITCRASQGI 222
Query: 63 ATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPEDS 122
+ + WY+Q P ++ L+ + ++ + G+ + S T TLT++S PED
Sbjct: 223 SNNLNWYQQKPGKTPKLLIY----AASSLQSGIPSR--FSDSGSGTDYTLTISSLQPEDF 276
Query: 123 SFYICSARDT 132
+ Y C D+
Sbjct: 277 ATYYCQQSDS 286
>gi|169194776 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 242
Score = 48.5 bits (114), Expect = 3e-06
Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 9/130 (6%)
Query: 6 TTLPREGG---VRPSRKMLLLLLLLGPGSGLGAVVSQHPSWVICKSGTSVKIECRSLDFQ 62
T+ P+ G VR ++L LL+L PG+ ++Q PS + G V I CR+
Sbjct: 109 TSQPQSGHSTEVRAPTQLLGLLVLWLPGARCDIQMTQSPSSLSASVGDRVTITCRASQGI 168
Query: 63 ATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPEDS 122
+ + WY+Q P ++ L+ + ++ + G+ + S T TLT++S PED
Sbjct: 169 SNNLNWYQQKPGKTPKLLIY----AASSLQSGIPSR--FSDSGSGTDYTLTISSLQPEDF 222
Query: 123 SFYICSARDT 132
+ Y C D+
Sbjct: 223 ATYYCQQSDS 232
>gi|169167318 PREDICTED: similar to hCG2042707 [Homo sapiens]
Length = 142
Score = 48.5 bits (114), Expect = 3e-06
Identities = 39/123 (31%), Positives = 58/123 (47%), Gaps = 10/123 (8%)
Query: 14 VRPSRKMLLLLLLLGPGSGLGAVVSQHPSWVICKSGTSVKIECRSLDFQATTMFWYRQFP 73
+R ++L LLLL PG+ ++Q PS + G V I CR+ + ++ WY+Q P
Sbjct: 12 MRVPAQLLGLLLLWLPGTRCDIQMTQSPSSLSASVGDRVTITCRASQGISNSLAWYQQKP 71
Query: 74 KQS--LMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPEDSSFYICSARD 131
++ L+L A S E GV S T TLT++S PED + Y C
Sbjct: 72 GKAPKLLLYAASR------LESGVPSR--FSGSGSGTDYTLTISSLQPEDFATYYCQQYY 123
Query: 132 TAP 134
+ P
Sbjct: 124 STP 126
>gi|169190399 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 242
Score = 48.5 bits (114), Expect = 3e-06
Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 9/130 (6%)
Query: 6 TTLPREGG---VRPSRKMLLLLLLLGPGSGLGAVVSQHPSWVICKSGTSVKIECRSLDFQ 62
T+ P+ G VR ++L LL+L PG+ ++Q PS + G V I CR+
Sbjct: 109 TSQPQSGHSTEVRAPTQLLGLLVLWLPGARCDIQMTQSPSSLSASVGDRVTITCRASQGI 168
Query: 63 ATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPEDS 122
+ + WY+Q P ++ L+ + ++ + G+ + S T TLT++S PED
Sbjct: 169 SNNLNWYQQKPGKTPKLLIY----AASSLQSGIPSR--FSDSGSGTDYTLTISSLQPEDF 222
Query: 123 SFYICSARDT 132
+ Y C D+
Sbjct: 223 ATYYCQQSDS 232
>gi|169174843 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 276
Score = 48.5 bits (114), Expect = 3e-06
Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 9/124 (7%)
Query: 14 VRPSRKMLLLLLLLG---PGSGLGAVVSQHPSWVICKSGTSVKIECRSLDFQATTMFWYR 70
VR ++L LL LLG PG ++Q PS + G V I CR+ + + WY+
Sbjct: 151 VRAPTQLLGLLGLLGLWLPGVRCDIQMTQSPSSLSASVGGRVTITCRASQGISNNLNWYQ 210
Query: 71 QFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPEDSSFYICSAR 130
Q P+++ L+ + ++ + G+ + S T TLT++S PED + Y C
Sbjct: 211 QKPRKTPKLLIY----AASSLQSGIPSR--FSDSGSGTDYTLTISSLQPEDFATYYCQQS 264
Query: 131 DTAP 134
D+ P
Sbjct: 265 DSNP 268
>gi|239754726 PREDICTED: similar to hCG2002986 [Homo sapiens]
Length = 189
Score = 47.0 bits (110), Expect = 8e-06
Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 3/111 (2%)
Query: 35 AVVSQHPSWVICKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQG 94
A V Q P + + G V + C+ + +FWYRQ + L L+ N + G
Sbjct: 58 AGVIQSPRHEVTEMGQEVTLRCKPISGH-DYLFWYRQTMMRGLELLIYFNNNVPID-DSG 115
Query: 95 VEKDKFLINHASLTLSTLTVTSAHPEDSSFYIC-SARDTAPGGDQTPRQEP 144
+ +D+F + + STL + + P DS+ Y C S+ TA P Q+P
Sbjct: 116 MPEDRFSAKMPNASFSTLKIQPSEPRDSAVYFCASSLATALQNHPFPVQKP 166
>gi|239741653 PREDICTED: hypothetical protein XP_002342271 [Homo
sapiens]
Length = 636
Score = 46.6 bits (109), Expect = 1e-05
Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 6/121 (4%)
Query: 14 VRPSRKMLLLLLLLGPGSGLGAVVSQHPSWVICKSGTSVKIECRSLDFQATTMFWYRQFP 73
+R ++L LL+L PG+ ++Q PS + G V I CR+ + + WY+Q P
Sbjct: 514 MRAPTQLLGLLVLWLPGARCDIQMTQSPSSLSASVGDRVTITCRASQGISNNLNWYQQKP 573
Query: 74 KQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPEDSSFYICSARDTA 133
++ L+ + ++ + G+ + S TLT+ S PED + Y C D+
Sbjct: 574 GKTPKLLIY----AASSLQSGIPSR--FSDSGSGADYTLTIRSLQPEDFATYYCQQSDST 627
Query: 134 P 134
P
Sbjct: 628 P 628
>gi|169163335 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 295
Score = 46.2 bits (108), Expect = 1e-05
Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 6/121 (4%)
Query: 14 VRPSRKMLLLLLLLGPGSGLGAVVSQHPSWVICKSGTSVKIECRSLDFQATTMFWYRQFP 73
VR ++L LL L PG+ ++Q PS + G V I CR+ + + WY+Q P
Sbjct: 173 VRAPTQLLGLLGLWLPGARCDIQMTQSPSSLSASVGGRVTITCRASQGISNNLNWYQQKP 232
Query: 74 KQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPEDSSFYICSARDTA 133
++ L+ + ++ + G+ + S TLT++S PED + Y C D+
Sbjct: 233 GKTPKLLIY----AASSLQSGIPSR--FSDSGSGADYTLTISSLQPEDFAAYYCQQSDST 286
Query: 134 P 134
P
Sbjct: 287 P 287
>gi|169163724 PREDICTED: similar to hCG26659 [Homo sapiens]
Length = 191
Score = 45.8 bits (107), Expect = 2e-05
Identities = 37/121 (30%), Positives = 56/121 (46%), Gaps = 6/121 (4%)
Query: 14 VRPSRKMLLLLLLLGPGSGLGAVVSQHPSWVICKSGTSVKIECRSLDFQATTMFWYRQFP 73
+R ++L LLLL G+ V+Q PS + G V I CR+ + + WY+Q P
Sbjct: 3 MRVPAQLLGLLLLWLRGARCDIQVTQSPSSLSASVGDRVTITCRASQGISNGLSWYQQKP 62
Query: 74 KQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPEDSSFYICSARDTA 133
Q+ L+ + ++ + GV S T TLT++S PED + Y C T
Sbjct: 63 GQAPTLLIY----AASSLQSGVPSR--FSGSGSGTDFTLTISSLQPEDVATYYCLQDYTT 116
Query: 134 P 134
P
Sbjct: 117 P 117
>gi|239747852 PREDICTED: hypothetical protein XP_002346449 [Homo
sapiens]
Length = 155
Score = 45.8 bits (107), Expect = 2e-05
Identities = 37/121 (30%), Positives = 56/121 (46%), Gaps = 6/121 (4%)
Query: 14 VRPSRKMLLLLLLLGPGSGLGAVVSQHPSWVICKSGTSVKIECRSLDFQATTMFWYRQFP 73
+R ++L LLLL G+ V+Q PS + G V I CR+ + + WY+Q P
Sbjct: 3 MRVPAQLLGLLLLWLRGARCDIQVTQSPSSLSASVGDRVTITCRASQGISNGLSWYQQKP 62
Query: 74 KQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPEDSSFYICSARDTA 133
Q+ L+ + ++ + GV S T TLT++S PED + Y C T
Sbjct: 63 GQAPTLLIY----AASSLQSGVPSR--FSGSGSGTDFTLTISSLQPEDVATYYCLQDYTT 116
Query: 134 P 134
P
Sbjct: 117 P 117
>gi|169163023 PREDICTED: similar to hCG26659 [Homo sapiens]
Length = 191
Score = 45.8 bits (107), Expect = 2e-05
Identities = 37/121 (30%), Positives = 56/121 (46%), Gaps = 6/121 (4%)
Query: 14 VRPSRKMLLLLLLLGPGSGLGAVVSQHPSWVICKSGTSVKIECRSLDFQATTMFWYRQFP 73
+R ++L LLLL G+ V+Q PS + G V I CR+ + + WY+Q P
Sbjct: 3 MRVPAQLLGLLLLWLRGARCDIQVTQSPSSLSASVGDRVTITCRASQGISNGLSWYQQKP 62
Query: 74 KQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPEDSSFYICSARDTA 133
Q+ L+ + ++ + GV S T TLT++S PED + Y C T
Sbjct: 63 GQAPTLLIY----AASSLQSGVPSR--FSGSGSGTDFTLTISSLQPEDVATYYCLQDYTT 116
Query: 134 P 134
P
Sbjct: 117 P 117
>gi|239754736 PREDICTED: similar to hCG2039503 [Homo sapiens]
Length = 135
Score = 45.4 bits (106), Expect = 2e-05
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 6/99 (6%)
Query: 37 VSQHPSWVICKSGTSVKIECRSLDFQATTMF--WYRQFPKQSLMLMATSNEGSKATYEQG 94
VSQ P + G V + C D + MF WYRQ +Q + L+ S + + G
Sbjct: 23 VSQTPRHKVTNMGQEVILRC---DPSSGHMFVHWYRQNLRQEMKLLI-SFQYQNIAVDSG 78
Query: 95 VEKDKFLINHASLTLSTLTVTSAHPEDSSFYICSARDTA 133
+ K++F + T STL + A P DS+ Y+ S+ TA
Sbjct: 79 MPKERFTAERPNGTSSTLKIHPAEPRDSAVYLYSSGGTA 117
>gi|239758119 PREDICTED: similar to hCG2042717 [Homo sapiens]
Length = 196
Score = 45.1 bits (105), Expect = 3e-05
Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 4/103 (3%)
Query: 45 ICKSGTSVKIECRSLDFQATT--MFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLI 102
+ K G S+++ C + F + M W RQ P + L ++ + S T K +F I
Sbjct: 40 LVKPGGSLRLSCAASGFTFSDYYMSWIRQAPGKGLEWVSYISSSSSYTNYADSVKGRFTI 99
Query: 103 NHASLTLST-LTVTSAHPEDSSFYICSARDTAPGGDQTPRQEP 144
+ + S L + S ED++ Y C ARDT GG PR +P
Sbjct: 100 SRDNAKNSLYLQMNSLRAEDTAVYYC-ARDTVRGGQCEPRHKP 141
>gi|239754742 PREDICTED: similar to hCG2002958 [Homo sapiens]
Length = 132
Score = 44.7 bits (104), Expect = 4e-05
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 4/106 (3%)
Query: 26 LLGPGSGLGAVVSQHPSWVICKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNE 85
LLG GS + A V+Q P I K+G + +EC M+WYRQ P L L+ S +
Sbjct: 13 LLGTGS-MDADVTQTPRNRITKTGKRIMLECSQTKGH-DRMYWYRQDPGLGLQLIYYSFD 70
Query: 86 GSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPEDSSFYICSARD 131
+G D + ++ + +L++ SA P ++ Y C+ D
Sbjct: 71 --VKDINKGEISDGYSVSRQAQAKFSLSLESAIPNQTALYFCATSD 114
>gi|239749273 PREDICTED: similar to hCG2039484 [Homo sapiens]
Length = 235
Score = 44.7 bits (104), Expect = 4e-05
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 8/107 (7%)
Query: 24 LLLLGPGSGLGAVVSQHPSWVICKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATS 83
LL GP + A V+Q P + + K+G S+ + C D M+WYRQ P L L+ S
Sbjct: 27 LLWAGP---VNAGVTQTPKFRVLKTGQSMTLLCAQ-DMNHEYMYWYRQDPGMGLRLIHYS 82
Query: 84 -NEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPEDSSFYICSA 129
EG+ A +G D + ++ L + SA P +S Y C++
Sbjct: 83 VGEGTTA---KGEVPDGYNVSRLKKQNFLLGLESAAPSQTSVYFCAS 126
>gi|239745527 PREDICTED: hypothetical protein XP_002343511 [Homo
sapiens]
Length = 147
Score = 44.7 bits (104), Expect = 4e-05
Identities = 32/104 (30%), Positives = 47/104 (45%), Gaps = 5/104 (4%)
Query: 45 ICKSGTSVKIECRS--LDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLI 102
+ + G S+++ C F + M W RQ P + L ++ G Y V K +F I
Sbjct: 30 LVQPGGSLRLSCAGSGFTFSSYAMHWVRQAPGKGLEWVSAIGTGGGTYYADSV-KGRFTI 88
Query: 103 NHASLTLST-LTVTSAHPEDSSFYICSARDTAPGGDQTPRQEPL 145
+ + S L + S ED + Y C ARDT G PR +PL
Sbjct: 89 SRDNAKNSLYLQMNSLRAEDMAVYYC-ARDTVRGSQCEPRHKPL 131
>gi|169217390 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 205
Score = 42.4 bits (98), Expect = 2e-04
Identities = 32/121 (26%), Positives = 55/121 (45%), Gaps = 6/121 (4%)
Query: 14 VRPSRKMLLLLLLLGPGSGLGAVVSQHPSWVICKSGTSVKIECRSLDFQATTMFWYRQFP 73
VR ++L LL+ PG ++Q PS + G V I CR+ + WY++ P
Sbjct: 83 VRAPTQLLGLLVFWLPGVRCDIQMTQSPSSLSASVGDRVTITCRASQGIINNLNWYQKKP 142
Query: 74 KQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPEDSSFYICSARDTA 133
++ L+ + ++ + G+ + S T T T++S PED + Y C D+
Sbjct: 143 GKTPKLLIY----AASSLQSGIPTR--FSDSGSGTDYTPTISSLQPEDFATYYCQQSDST 196
Query: 134 P 134
P
Sbjct: 197 P 197
>gi|169217347 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 205
Score = 42.4 bits (98), Expect = 2e-04
Identities = 32/121 (26%), Positives = 55/121 (45%), Gaps = 6/121 (4%)
Query: 14 VRPSRKMLLLLLLLGPGSGLGAVVSQHPSWVICKSGTSVKIECRSLDFQATTMFWYRQFP 73
VR ++L LL+ PG ++Q PS + G V I CR+ + WY++ P
Sbjct: 83 VRAPTQLLGLLVFWLPGVRCDIQMTQSPSSLSASVGDRVTITCRASQGIINNLNWYQKKP 142
Query: 74 KQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPEDSSFYICSARDTA 133
++ L+ + ++ + G+ + S T T T++S PED + Y C D+
Sbjct: 143 GKTPKLLIY----AASSLQSGIPTR--FSDSGSGTDYTPTISSLQPEDFATYYCQQSDST 196
Query: 134 P 134
P
Sbjct: 197 P 197
>gi|239754738 PREDICTED: similar to hCG2039504 [Homo sapiens]
Length = 182
Score = 41.2 bits (95), Expect = 4e-04
Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 3/107 (2%)
Query: 23 LLLLLGPGSGLGAVVSQHPSWVICKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMAT 82
++ LLG G A V Q+P ++ + G ++ C + + ++WYRQ P++ L M
Sbjct: 43 VICLLGAGLS-NAGVMQNPRHLVRRRGQEARLRCSPMKGHSH-VYWYRQLPEEGLKFMVY 100
Query: 83 SNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPEDSSFYICSA 129
+ E G+ K++F S L + DS+ Y C++
Sbjct: 101 LQK-ENIIDESGMPKERFSAEFPKEGPSILRIQQVVRGDSAAYFCAS 146
>gi|169163270 PREDICTED: similar to hCG2043206 [Homo sapiens]
Length = 151
Score = 41.2 bits (95), Expect = 4e-04
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 15/114 (13%)
Query: 19 KMLLLLLLLGPGSGLGAVVSQHPSWVICKSGTSVKIECR-SLDFQATTMFWYRQFPKQSL 77
++L LLLL P + V++Q P+ + G + CR S ++ + WY+Q P Q+
Sbjct: 6 QLLFLLLLWLPDTTGEIVMTQSPATLSLSPGERATLSCRASQSVSSSYLSWYQQKPGQAP 65
Query: 78 MLM----ATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPEDSSFYIC 127
L+ +T G A + S T TLT++S PED + Y C
Sbjct: 66 RLLIYGASTRATGIPARFS----------GSGSGTDFTLTISSLQPEDFAVYYC 109
>gi|239753214 PREDICTED: similar to hCG2043206 [Homo sapiens]
Length = 157
Score = 40.8 bits (94), Expect = 6e-04
Identities = 35/119 (29%), Positives = 53/119 (44%), Gaps = 20/119 (16%)
Query: 19 KMLLLLLLLGPGSGL-----GAVVSQHPSWVICKSGTSVKIECR-SLDFQATTMFWYRQF 72
++L LLLL PG G V++Q P+ + G + CR S ++ + WY+Q
Sbjct: 6 QLLFLLLLWLPGEGNMRYHGEIVMTQSPATLSLSPGERATLSCRASQSVSSSYLSWYQQK 65
Query: 73 PKQSLMLM----ATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPEDSSFYIC 127
P Q+ L+ +T G A + S T TLT++S PED + Y C
Sbjct: 66 PGQAPRLLIYGASTRATGIPARFS----------GSGSGTDFTLTISSLQPEDFAVYYC 114
>gi|239754744 PREDICTED: similar to hCG2043257 [Homo sapiens]
Length = 132
Score = 40.4 bits (93), Expect = 7e-04
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 4/103 (3%)
Query: 30 GSGL-GAVVSQHPSWVICKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSK 88
G+GL A + Q P +++ +G + +EC S M+WY+Q P L L+ S G
Sbjct: 15 GAGLMEADIYQTPRYLVIGTGKKITLEC-SQTMGHDKMYWYQQDPGMELHLIHYSY-GVN 72
Query: 89 ATYEQGVEKDKFLINHASLTLSTLTVTSAHPEDSSFYICSARD 131
+T E+G + ++ LT+ SA P +S Y+C++ +
Sbjct: 73 ST-EKGDLSSESTVSRIRTEHFPLTLESARPSHTSQYLCASSE 114
>gi|239750750 PREDICTED: hypothetical protein XP_002347524 [Homo
sapiens]
Length = 202
Score = 40.4 bits (93), Expect = 7e-04
Identities = 35/129 (27%), Positives = 55/129 (42%), Gaps = 12/129 (9%)
Query: 45 ICKSGTSVKIECRSLDFQATT--MFWYRQFPKQSLMLMATSNEGSKAT-YEQGVEKDKFL 101
+ K G S+++ C + F + M W RQ P + L + S G+ T Y Q + +
Sbjct: 30 LVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRSYSGNGNTGYAQKFQGRVTM 89
Query: 102 INHASLTLSTLTVTSAHPEDSSFYICSARDT----APGGDQTPRQEPLQLPSAPAGPLSA 157
S + + + ++S ED Y C A+DT P G T ++ L A P
Sbjct: 90 TRDTSTSTAYMELSSQRSEDIDVYYCCAQDTGGCSGPPGAHTTQRIAQDLQGAIRTP--- 146
Query: 158 ERGSVENGK 166
G VE+ K
Sbjct: 147 --GCVEDNK 153
>gi|239754734 PREDICTED: similar to hCG2002964 [Homo sapiens]
Length = 122
Score = 39.7 bits (91), Expect = 0.001
Identities = 28/109 (25%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 21 LLLLLLLGPGSGLGAVVSQHPSWVICKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLM 80
+ +L LL GS G V+Q P ++ G K+ C + + +FWY+Q K +
Sbjct: 8 ITILCLLAAGSP-GEEVAQTPKHLVRGEGQKAKLYCAPIKGHSY-VFWYQQVLKNEFKFL 65
Query: 81 ATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPEDSSFYICSA 129
S + E G+ K++F + +L + + EDS+ Y C++
Sbjct: 66 I-SFQNENVFDETGMPKERFSAKCLPNSPCSLEIQATKLEDSAVYFCAS 113
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.130 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,320,800
Number of Sequences: 37866
Number of extensions: 343491
Number of successful extensions: 1477
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 81
Number of HSP's that attempted gapping in prelim test: 1279
Number of HSP's gapped (non-prelim): 263
length of query: 170
length of database: 18,247,518
effective HSP length: 95
effective length of query: 75
effective length of database: 14,650,248
effective search space: 1098768600
effective search space used: 1098768600
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.