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Search of human proteins with 239754738
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239754738 PREDICTED: similar to hCG2039504 [Homo sapiens]
(182 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239754738 PREDICTED: similar to hCG2039504 [Homo sapiens] 386 e-108
gi|239754728 PREDICTED: similar to hCG1737376 [Homo sapiens] 134 4e-32
gi|239754726 PREDICTED: similar to hCG2002986 [Homo sapiens] 133 1e-31
gi|239749275 PREDICTED: hypothetical protein XP_002346976 [Homo ... 125 2e-29
gi|239754734 PREDICTED: similar to hCG2002964 [Homo sapiens] 124 3e-29
gi|239754736 PREDICTED: similar to hCG2039503 [Homo sapiens] 106 1e-23
gi|239754724 PREDICTED: similar to hCG1737365 [Homo sapiens] 104 4e-23
gi|239754730 PREDICTED: similar to hCG1737378 [Homo sapiens] 100 7e-22
gi|239749277 PREDICTED: hypothetical protein XP_002346977 [Homo ... 100 1e-21
gi|239749273 PREDICTED: similar to hCG2039484 [Homo sapiens] 80 1e-15
gi|239754732 PREDICTED: similar to hCG1737379 [Homo sapiens] 79 2e-15
gi|239749279 PREDICTED: hypothetical protein XP_002346978 [Homo ... 79 2e-15
gi|239754742 PREDICTED: similar to hCG2002958 [Homo sapiens] 69 2e-12
gi|239754744 PREDICTED: similar to hCG2043257 [Homo sapiens] 66 2e-11
gi|239757666 PREDICTED: similar to hCG2040021 [Homo sapiens] 42 4e-04
gi|239754740 PREDICTED: similar to hCG2039506 [Homo sapiens] 41 5e-04
gi|239752152 PREDICTED: hypothetical protein XP_002348153 [Homo ... 40 0.001
gi|169163335 PREDICTED: similar to hCG1742442 [Homo sapiens] 39 0.002
gi|239741653 PREDICTED: hypothetical protein XP_002342271 [Homo ... 39 0.002
gi|169218204 PREDICTED: similar to pre-B lymphocyte gene 1 [Homo... 38 0.004
gi|239743839 PREDICTED: hypothetical protein XP_002342967 [Homo ... 38 0.005
gi|169174843 PREDICTED: similar to hCG1742442 [Homo sapiens] 37 0.009
gi|169217719 PREDICTED: similar to hCG96018 [Homo sapiens] 36 0.021
gi|239757668 PREDICTED: similar to Ig lambda chain [Homo sapiens] 36 0.021
gi|89062025 PREDICTED: similar to hCG96018 [Homo sapiens] 36 0.021
gi|239755286 PREDICTED: similar to hCG1742442 [Homo sapiens] 35 0.027
gi|169194776 PREDICTED: similar to hCG1742442 [Homo sapiens] 35 0.027
gi|169190399 PREDICTED: similar to hCG1742442 [Homo sapiens] 35 0.027
gi|239753214 PREDICTED: similar to hCG2043206 [Homo sapiens] 34 0.079
gi|169163270 PREDICTED: similar to hCG2043206 [Homo sapiens] 34 0.079
>gi|239754738 PREDICTED: similar to hCG2039504 [Homo sapiens]
Length = 182
Score = 386 bits (991), Expect = e-108
Identities = 182/182 (100%), Positives = 182/182 (100%)
Query: 1 MHLVGGSCEVWFPDVLQQVPLPCLWAPSMANSAMDTRVLCCAVICLLGAGLSNAGVMQNP 60
MHLVGGSCEVWFPDVLQQVPLPCLWAPSMANSAMDTRVLCCAVICLLGAGLSNAGVMQNP
Sbjct: 1 MHLVGGSCEVWFPDVLQQVPLPCLWAPSMANSAMDTRVLCCAVICLLGAGLSNAGVMQNP 60
Query: 61 RHLVRRRGQEARLRCSPMKGHSHVYWYRQLPEEGLKFMVYLQKENIIDESGMPKERFSAE 120
RHLVRRRGQEARLRCSPMKGHSHVYWYRQLPEEGLKFMVYLQKENIIDESGMPKERFSAE
Sbjct: 61 RHLVRRRGQEARLRCSPMKGHSHVYWYRQLPEEGLKFMVYLQKENIIDESGMPKERFSAE 120
Query: 121 FPKEGPSILRIQQVVRGDSAAYFCASSPPTLMQSHILSVHKHPPDLPWKQRWARKGNALP 180
FPKEGPSILRIQQVVRGDSAAYFCASSPPTLMQSHILSVHKHPPDLPWKQRWARKGNALP
Sbjct: 121 FPKEGPSILRIQQVVRGDSAAYFCASSPPTLMQSHILSVHKHPPDLPWKQRWARKGNALP 180
Query: 181 VQ 182
VQ
Sbjct: 181 VQ 182
>gi|239754728 PREDICTED: similar to hCG1737376 [Homo sapiens]
Length = 170
Score = 134 bits (337), Expect = 4e-32
Identities = 66/135 (48%), Positives = 85/135 (62%), Gaps = 5/135 (3%)
Query: 34 MDTRVLCCAVICLLGAGLSNAGVMQNPRHLVRRRGQEARLRCSPMKGHSHVYWYRQLPEE 93
M TR+LCC V+CLLG L +A V Q PRH V GQE +RC P+ GH+ V+WYRQ +
Sbjct: 1 MATRLLCCVVLCLLGEELIDARVTQTPRHKVTEMGQEVTMRCQPILGHNTVFWYRQTMMQ 60
Query: 94 GLKFMVYLQKENIIDESGMPKERFSAEFPKEGPSILRIQQVVRGDSAAYFCASSPPTLMQ 153
GL+ + Y + +D+SGMPK+RFSAE P + L+IQ DSA YFCAS T +Q
Sbjct: 61 GLELLAYFRNRAPLDDSGMPKDRFSAEMPDATLATLKIQPSEPRDSAVYFCASGLVTALQ 120
Query: 154 SHILSVHKHPPDLPW 168
+H+L V K PW
Sbjct: 121 NHLLPVQK-----PW 130
>gi|239754726 PREDICTED: similar to hCG2002986 [Homo sapiens]
Length = 189
Score = 133 bits (334), Expect = 1e-31
Identities = 65/139 (46%), Positives = 88/139 (63%), Gaps = 5/139 (3%)
Query: 30 ANSAMDTRVLCCAVICLLGAGLSNAGVMQNPRHLVRRRGQEARLRCSPMKGHSHVYWYRQ 89
++SAMD+ LCC +C+L A ++AGV+Q+PRH V GQE LRC P+ GH +++WYRQ
Sbjct: 34 SHSAMDSWTLCCVSLCILVAKHTDAGVIQSPRHEVTEMGQEVTLRCKPISGHDYLFWYRQ 93
Query: 90 LPEEGLKFMVYLQKENIIDESGMPKERFSAEFPKEGPSILRIQQVVRGDSAAYFCASSPP 149
GL+ ++Y ID+SGMP++RFSA+ P S L+IQ DSA YFCASS
Sbjct: 94 TMMRGLELLIYFNNNVPIDDSGMPEDRFSAKMPNASFSTLKIQPSEPRDSAVYFCASSLA 153
Query: 150 TLMQSHILSVHKHPPDLPW 168
T +Q+H V K PW
Sbjct: 154 TALQNHPFPVQK-----PW 167
>gi|239749275 PREDICTED: hypothetical protein XP_002346976 [Homo
sapiens]
Length = 245
Score = 125 bits (314), Expect = 2e-29
Identities = 63/140 (45%), Positives = 85/140 (60%)
Query: 27 PSMANSAMDTRVLCCAVICLLGAGLSNAGVMQNPRHLVRRRGQEARLRCSPMKGHSHVYW 86
PS + AM TR+L CLLGA + AGV Q+P + V +G++ LRC P+ GH+ +YW
Sbjct: 74 PSCPDPAMGTRLLFWVAFCLLGADHTGAGVSQSPSNKVTEKGKDVELRCDPISGHTALYW 133
Query: 87 YRQLPEEGLKFMVYLQKENIIDESGMPKERFSAEFPKEGPSILRIQQVVRGDSAAYFCAS 146
YRQ +GL+F++Y Q + D+SG+P +RFSAE S L IQ+ + DSA Y CAS
Sbjct: 134 YRQSLGQGLEFLIYFQGNSAPDKSGLPSDRFSAERTGGSVSTLTIQRTQQEDSAVYLCAS 193
Query: 147 SPPTLMQSHILSVHKHPPDL 166
S T S +L HK P L
Sbjct: 194 SLATAWHSRLLPAHKPHPSL 213
>gi|239754734 PREDICTED: similar to hCG2002964 [Homo sapiens]
Length = 122
Score = 124 bits (312), Expect = 3e-29
Identities = 57/113 (50%), Positives = 76/113 (67%)
Query: 40 CCAVICLLGAGLSNAGVMQNPRHLVRRRGQEARLRCSPMKGHSHVYWYRQLPEEGLKFMV 99
C ++CLL AG V Q P+HLVR GQ+A+L C+P+KGHS+V+WY+Q+ + KF++
Sbjct: 7 CITILCLLAAGSPGEEVAQTPKHLVRGEGQKAKLYCAPIKGHSYVFWYQQVLKNEFKFLI 66
Query: 100 YLQKENIIDESGMPKERFSAEFPKEGPSILRIQQVVRGDSAAYFCASSPPTLM 152
Q EN+ DE+GMPKERFSA+ P L IQ DSA YFCASS T++
Sbjct: 67 SFQNENVFDETGMPKERFSAKCLPNSPCSLEIQATKLEDSAVYFCASSQSTVL 119
>gi|239754736 PREDICTED: similar to hCG2039503 [Homo sapiens]
Length = 135
Score = 106 bits (264), Expect = 1e-23
Identities = 54/113 (47%), Positives = 66/113 (58%)
Query: 34 MDTRVLCCAVICLLGAGLSNAGVMQNPRHLVRRRGQEARLRCSPMKGHSHVYWYRQLPEE 93
MD +LC +CLL AG S GV Q PRH V GQE LRC P GH V+WYRQ +
Sbjct: 1 MDIWLLCWVTLCLLAAGHSEPGVSQTPRHKVTNMGQEVILRCDPSSGHMFVHWYRQNLRQ 60
Query: 94 GLKFMVYLQKENIIDESGMPKERFSAEFPKEGPSILRIQQVVRGDSAAYFCAS 146
+K ++ Q +NI +SGMPKERF+AE P S L+I DSA Y +S
Sbjct: 61 EMKLLISFQYQNIAVDSGMPKERFTAERPNGTSSTLKIHPAEPRDSAVYLYSS 113
>gi|239754724 PREDICTED: similar to hCG1737365 [Homo sapiens]
Length = 147
Score = 104 bits (260), Expect = 4e-23
Identities = 53/125 (42%), Positives = 75/125 (60%)
Query: 27 PSMANSAMDTRVLCCAVICLLGAGLSNAGVMQNPRHLVRRRGQEARLRCSPMKGHSHVYW 86
PS + AM TR+LC CLL L AGV+Q+PR+ + + Q C+P+ GH+ +YW
Sbjct: 23 PSCPDPAMGTRLLCWVAFCLLVEELIEAGVVQSPRYKIIEKKQPVAFWCNPISGHNTLYW 82
Query: 87 YRQLPEEGLKFMVYLQKENIIDESGMPKERFSAEFPKEGPSILRIQQVVRGDSAAYFCAS 146
Y Q +G + ++ + E +D+S +PK+RFSAE K S L+IQ GDSA Y CAS
Sbjct: 83 YLQNLGQGPELLIRYENEEAVDDSQLPKDRFSAERLKGVDSTLKIQPAELGDSAVYLCAS 142
Query: 147 SPPTL 151
S T+
Sbjct: 143 SLDTV 147
>gi|239754730 PREDICTED: similar to hCG1737378 [Homo sapiens]
Length = 179
Score = 100 bits (249), Expect = 7e-22
Identities = 51/124 (41%), Positives = 70/124 (56%)
Query: 39 LCCAVICLLGAGLSNAGVMQNPRHLVRRRGQEARLRCSPMKGHSHVYWYRQLPEEGLKFM 98
+ C + L AGV Q P H V +GQ LRC P+ GH ++YWYR++ + +KF+
Sbjct: 1 MSCILFLSLPTEHIEAGVTQFPSHSVIEKGQTVTLRCDPISGHDNLYWYRRVMGKEIKFL 60
Query: 99 VYLQKENIIDESGMPKERFSAEFPKEGPSILRIQQVVRGDSAAYFCASSPPTLMQSHILS 158
++ KE+ DESGMP RF AE S L++Q DS YFCASS T++ S L+
Sbjct: 61 LHFVKESKQDESGMPNNRFLAERTGGTYSTLKVQPAELEDSGVYFCASSQDTVLHSRALA 120
Query: 159 VHKH 162
V H
Sbjct: 121 VQNH 124
>gi|239749277 PREDICTED: hypothetical protein XP_002346977 [Homo
sapiens]
Length = 118
Score = 99.8 bits (247), Expect = 1e-21
Identities = 50/118 (42%), Positives = 71/118 (60%)
Query: 34 MDTRVLCCAVICLLGAGLSNAGVMQNPRHLVRRRGQEARLRCSPMKGHSHVYWYRQLPEE 93
M TR+LC CLL L AGV+Q+PR+ + + Q C+P+ GH+ +YWY Q +
Sbjct: 1 MGTRLLCWVAFCLLVEELIEAGVVQSPRYKIIEKKQPVAFWCNPISGHNTLYWYLQNLGQ 60
Query: 94 GLKFMVYLQKENIIDESGMPKERFSAEFPKEGPSILRIQQVVRGDSAAYFCASSPPTL 151
G + ++ + E +D+S +PK+RFSAE K S L+IQ GDSA Y CASS T+
Sbjct: 61 GPELLIRYENEEAVDDSQLPKDRFSAERLKGVDSTLKIQPAELGDSAVYLCASSLDTV 118
>gi|239749273 PREDICTED: similar to hCG2039484 [Homo sapiens]
Length = 235
Score = 80.1 bits (196), Expect = 1e-15
Identities = 44/129 (34%), Positives = 66/129 (51%), Gaps = 1/129 (0%)
Query: 33 AMDTRVLCCAVICLLGAGLSNAGVMQNPRHLVRRRGQEARLRCSPMKGHSHVYWYRQLPE 92
AM +LCC LL AG NAGV Q P+ V + GQ L C+ H ++YWYRQ P
Sbjct: 14 AMSLGLLCCGAFSLLWAGPVNAGVTQTPKFRVLKTGQSMTLLCAQDMNHEYMYWYRQDPG 73
Query: 93 EGLKFMVYLQKENIIDESGMPKERFSAEFPKEGPSILRIQQVVRGDSAAYFCASSPPTLM 152
GL+ + Y E + +P + ++ K+ +L ++ ++ YFCASS T++
Sbjct: 74 MGLRLIHYSVGEGTTAKGEVP-DGYNVSRLKKQNFLLGLESAAPSQTSVYFCASSYSTVL 132
Query: 153 QSHILSVHK 161
+LS K
Sbjct: 133 HGCLLSAQK 141
>gi|239754732 PREDICTED: similar to hCG1737379 [Homo sapiens]
Length = 167
Score = 79.0 bits (193), Expect = 2e-15
Identities = 42/118 (35%), Positives = 65/118 (55%), Gaps = 1/118 (0%)
Query: 44 ICLLGAGLSNAGVMQNPRHLVRRRGQEARLRCSPMKGHSHVYWYRQLPEEGLKFMVYLQK 103
+CLLG G +A V+QNPR+ V + G+ L CS H+ +YWY+Q + K + +
Sbjct: 11 LCLLGTGHGDAMVIQNPRYQVTQFGKPVTLSCSQTLNHNVMYWYQQKSSQAPKLLFHYYD 70
Query: 104 ENIIDESGMPKERFSAEFPKEGPSILRIQQVVRGDSAAYFCASSPPTLMQSHILSVHK 161
++ +E+ P + F + P L I+ GD+A Y CA+S T +Q +LSVHK
Sbjct: 71 KDFNNEADTP-DNFQSRRPNTSFCFLDIRSPGLGDAAMYLCATSRDTELQCFLLSVHK 127
>gi|239749279 PREDICTED: hypothetical protein XP_002346978 [Homo
sapiens]
Length = 167
Score = 79.0 bits (193), Expect = 2e-15
Identities = 42/118 (35%), Positives = 65/118 (55%), Gaps = 1/118 (0%)
Query: 44 ICLLGAGLSNAGVMQNPRHLVRRRGQEARLRCSPMKGHSHVYWYRQLPEEGLKFMVYLQK 103
+CLLG G +A V+QNPR+ V + G+ L CS H+ +YWY+Q + K + +
Sbjct: 11 LCLLGTGHGDAMVIQNPRYQVTQFGKPVTLSCSQTLNHNVMYWYQQKSSQAPKLLFHYYD 70
Query: 104 ENIIDESGMPKERFSAEFPKEGPSILRIQQVVRGDSAAYFCASSPPTLMQSHILSVHK 161
++ +E+ P + F + P L I+ GD+A Y CA+S T +Q +LSVHK
Sbjct: 71 KDFNNEADTP-DNFQSRRPNTSFCFLDIRSPGLGDAAMYLCATSRDTELQCFLLSVHK 127
>gi|239754742 PREDICTED: similar to hCG2002958 [Homo sapiens]
Length = 132
Score = 69.3 bits (168), Expect = 2e-12
Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 1/114 (0%)
Query: 34 MDTRVLCCAVICLLGAGLSNAGVMQNPRHLVRRRGQEARLRCSPMKGHSHVYWYRQLPEE 93
M + + C LLG G +A V Q PR+ + + G+ L CS KGH +YWYRQ P
Sbjct: 1 MASLLFFCGAFYLLGTGSMDADVTQTPRNRITKTGKRIMLECSQTKGHDRMYWYRQDPGL 60
Query: 94 GLKFMVYLQKENIIDESGMPKERFSAEFPKEGPSILRIQQVVRGDSAAYFCASS 147
GL+ + Y I++ G + +S + L ++ + +A YFCA+S
Sbjct: 61 GLQLIYYSFDVKDINK-GEISDGYSVSRQAQAKFSLSLESAIPNQTALYFCATS 113
>gi|239754744 PREDICTED: similar to hCG2043257 [Homo sapiens]
Length = 132
Score = 65.9 bits (159), Expect = 2e-11
Identities = 41/131 (31%), Positives = 60/131 (45%), Gaps = 1/131 (0%)
Query: 34 MDTRVLCCAVICLLGAGLSNAGVMQNPRHLVRRRGQEARLRCSPMKGHSHVYWYRQLPEE 93
M R+LC LGAGL A + Q PR+LV G++ L CS GH +YWY+Q P
Sbjct: 1 MTIRLLCYMGFYFLGAGLMEADIYQTPRYLVIGTGKKITLECSQTMGHDKMYWYQQDPGM 60
Query: 94 GLKFMVYLQKENIIDESGMPKERFSAEFPKEGPSILRIQQVVRGDSAAYFCASSPPTLMQ 153
L + Y N ++ + E + E L ++ ++ Y CASS T++
Sbjct: 61 ELHLIHYSYGVNSTEKGDLSSESTVSRIRTE-HFPLTLESARPSHTSQYLCASSEYTVLH 119
Query: 154 SHILSVHKHPP 164
+ S K P
Sbjct: 120 GYRHSAQKGSP 130
>gi|239757666 PREDICTED: similar to hCG2040021 [Homo sapiens]
Length = 137
Score = 41.6 bits (96), Expect = 4e-04
Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 11/105 (10%)
Query: 56 VMQNPRHLVRRRGQEARLRCSPMK-GHSHVYWYRQLPEEGLKFMVYLQKENIIDESGMPK 114
V+ P + G+ AR+ C G V+WY+Q P + +VY + SG+P
Sbjct: 22 VLTQPPSVSVAPGKTARITCGGNNIGSKSVHWYQQKPGQAPVLVVYDDSDR---PSGIP- 77
Query: 115 ERFSAEFPKEGPSILRIQQVVRGDSAAYFC-----ASSPPTLMQS 154
ERFS + L I +V GD A Y+C +S PT+ Q+
Sbjct: 78 ERFSGS-NSGNTATLTISRVEAGDEADYYCQVWDSSSDHPTVTQA 121
>gi|239754740 PREDICTED: similar to hCG2039506 [Homo sapiens]
Length = 170
Score = 41.2 bits (95), Expect = 5e-04
Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 3/107 (2%)
Query: 43 VICLLGAGLS-NAGVMQNPRHLVRRRGQEARLRCSPMKGHSH-VYWYRQLPEEGLKFMVY 100
++ LLG G A V Q+P ++ + G ++ C + + ++WYRQ P++ L M
Sbjct: 23 LLLLLGPGSGLGAVVSQHPSWVICKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMAT 82
Query: 101 LQK-ENIIDESGMPKERFSAEFPKEGPSILRIQQVVRGDSAAYFCAS 146
+ E G+ K++F S L + DS+ Y C++
Sbjct: 83 SNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPEDSSFYICSA 129
>gi|239752152 PREDICTED: hypothetical protein XP_002348153 [Homo
sapiens]
Length = 264
Score = 39.7 bits (91), Expect = 0.001
Identities = 33/102 (32%), Positives = 45/102 (44%), Gaps = 10/102 (9%)
Query: 49 AGLSNAGVMQNPRHLVRRRGQEARLRCSPMK---GHSHVYWYRQLPEEGLKFMVYLQKEN 105
AG V+ P GQ + CS G + V WY+QLP K ++Y +
Sbjct: 41 AGSWAQSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQR 100
Query: 106 IIDESGMPKERFSAEFPKEGPSI-LRIQQVVRGDSAAYFCAS 146
SG+P +RFS K G S L I + D A Y+CA+
Sbjct: 101 ---PSGVP-DRFSGS--KSGTSASLAISGLQSEDEADYYCAA 136
>gi|169163335 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 295
Score = 38.9 bits (89), Expect = 0.002
Identities = 36/116 (31%), Positives = 54/116 (46%), Gaps = 13/116 (11%)
Query: 46 LLGAGLSNAG----VMQNPRHLVRRRGQEARLRCSPMKGHSH-VYWYRQLPEEGLKFMVY 100
LLG L A + Q+P L G + C +G S+ + WY+Q P + K ++Y
Sbjct: 182 LLGLWLPGARCDIQMTQSPSSLSASVGGRVTITCRASQGISNNLNWYQQKPGKTPKLLIY 241
Query: 101 LQKENIIDESGMPKERFSAEFPKEGPSILRIQQVVRGDSAAYFCA---SSPPTLMQ 153
+SG+P RFS + L I + D AAY+C S+PPT++Q
Sbjct: 242 AASSL---QSGIP-SRFS-DSGSGADYTLTISSLQPEDFAAYYCQQSDSTPPTVLQ 292
>gi|239741653 PREDICTED: hypothetical protein XP_002342271 [Homo
sapiens]
Length = 636
Score = 38.9 bits (89), Expect = 0.002
Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 10/122 (8%)
Query: 36 TRVLCCAVICLLGAGLSNAGVMQNPRHLVRRRGQEARLRCSPMKGHSH-VYWYRQLPEEG 94
T++L V+ L GA + + Q+P L G + C +G S+ + WY+Q P +
Sbjct: 518 TQLLGLLVLWLPGARC-DIQMTQSPSSLSASVGDRVTITCRASQGISNNLNWYQQKPGKT 576
Query: 95 LKFMVYLQKENIIDESGMPKERFSAEFPKEGPSILRIQQVVRGDSAAYFCA---SSPPTL 151
K ++Y +SG+P RFS + L I+ + D A Y+C S+PPT
Sbjct: 577 PKLLIYAASSL---QSGIP-SRFS-DSGSGADYTLTIRSLQPEDFATYYCQQSDSTPPTA 631
Query: 152 MQ 153
+Q
Sbjct: 632 LQ 633
>gi|169218204 PREDICTED: similar to pre-B lymphocyte gene 1 [Homo
sapiens]
Length = 123
Score = 38.1 bits (87), Expect = 0.004
Identities = 36/128 (28%), Positives = 56/128 (43%), Gaps = 12/128 (9%)
Query: 34 MDTRV---LCCAVICLLGAGLSNAGVMQNPRHLVRRRGQEARLRCSPMKG-HSHVYWYRQ 89
MD RV L ++ L + + Q+P L G + C +G S++ WY+Q
Sbjct: 1 MDMRVPAQLLGLLLLWLPGARCDIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQ 60
Query: 90 LPEEGLKFMVYLQKENIIDESGMPKERFSAEFPKEGPSILRIQQVVRGDSAAYFCA---S 146
P + K ++Y +SG+P RFS L I + D A Y+C S
Sbjct: 61 KPGKAPKLLIYAASTL---QSGVP-SRFSGS-GSGTEFTLTISSLQPEDFATYYCQQLNS 115
Query: 147 SPPTLMQS 154
PPT++Q+
Sbjct: 116 YPPTVLQT 123
>gi|239743839 PREDICTED: hypothetical protein XP_002342967 [Homo
sapiens]
Length = 761
Score = 37.7 bits (86), Expect = 0.005
Identities = 40/139 (28%), Positives = 60/139 (43%), Gaps = 17/139 (12%)
Query: 27 PSMANSAMDTRVLC----CAVICLLGAGLSNAG----VMQNPRHLVRRRGQEARLRCSPM 78
PS S T V ++ LLG L A + Q+P L G + C
Sbjct: 625 PSQPQSGHSTDVRAPTQLLGLLGLLGLWLPGARCDIQMTQSPSSLSASVGGRVTITCRAS 684
Query: 79 KGHSH-VYWYRQLPEEGLKFMVYLQKENIIDESGMPKERFSAEFPKEGPSILRIQQVVRG 137
+G S+ + WY+Q P + K ++Y +SG+P RFS + L I +
Sbjct: 685 QGISNNLNWYQQKPRKTPKLLIYAASSL---QSGIP-SRFS-DSGSGTDYTLTISSLQPE 739
Query: 138 DSAAYFCA---SSPPTLMQ 153
D A Y+C S+PPT++Q
Sbjct: 740 DFATYYCQQSDSNPPTVLQ 758
>gi|169174843 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 276
Score = 37.0 bits (84), Expect = 0.009
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 9/100 (9%)
Query: 58 QNPRHLVRRRGQEARLRCSPMKGHSH-VYWYRQLPEEGLKFMVYLQKENIIDESGMPKER 116
Q+P L G + C +G S+ + WY+Q P + K ++Y +SG+P R
Sbjct: 179 QSPSSLSASVGGRVTITCRASQGISNNLNWYQQKPRKTPKLLIYAASSL---QSGIP-SR 234
Query: 117 FSAEFPKEGPSILRIQQVVRGDSAAYFCA---SSPPTLMQ 153
FS + L I + D A Y+C S+PPT++Q
Sbjct: 235 FS-DSGSGTDYTLTISSLQPEDFATYYCQQSDSNPPTVLQ 273
>gi|169217719 PREDICTED: similar to hCG96018 [Homo sapiens]
Length = 150
Score = 35.8 bits (81), Expect = 0.021
Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 5/95 (5%)
Query: 56 VMQNPRHLVRRRGQEARLRCSPMKGHS----HVYWYRQLPEEGLKFMV-YLQKENIIDES 110
V+ P L G AR C+ G + +YWY+Q P ++++ Y + S
Sbjct: 22 VLTQPTSLSASPGASARFTCTLRSGINVGTYRIYWYQQKPGSLPRYLLRYKSDSDKQQGS 81
Query: 111 GMPKERFSAEFPKEGPSILRIQQVVRGDSAAYFCA 145
G+P ++ +L I + D A Y+CA
Sbjct: 82 GVPSRFSGSKDASTNAGLLLISGLQSEDEADYYCA 116
>gi|239757668 PREDICTED: similar to Ig lambda chain [Homo sapiens]
Length = 288
Score = 35.8 bits (81), Expect = 0.021
Identities = 28/104 (26%), Positives = 45/104 (43%), Gaps = 11/104 (10%)
Query: 48 GAGLSNAGVMQNPRHLVRRRGQEARLRC----SPMKGHSHVYWYRQLPEEGLKFMVYLQK 103
G G + P + GQ + C S + G+++V WY+Q P + K M+Y
Sbjct: 14 GTGSWAQSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIY--- 70
Query: 104 ENIIDESGMPKERFSAEFPKEG-PSILRIQQVVRGDSAAYFCAS 146
++ + RFS K G + L I + D A Y+C+S
Sbjct: 71 -DVSNRPSGVSNRFSGS--KSGNTASLTISGLQAEDEADYYCSS 111
>gi|89062025 PREDICTED: similar to hCG96018 [Homo sapiens]
Length = 150
Score = 35.8 bits (81), Expect = 0.021
Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 5/95 (5%)
Query: 56 VMQNPRHLVRRRGQEARLRCSPMKGHS----HVYWYRQLPEEGLKFMV-YLQKENIIDES 110
V+ P L G AR C+ G + +YWY+Q P ++++ Y + S
Sbjct: 22 VLTQPTSLSASPGASARFTCTLRSGINVGTYRIYWYQQKPGSLPRYLLRYKSDSDKQQGS 81
Query: 111 GMPKERFSAEFPKEGPSILRIQQVVRGDSAAYFCA 145
G+P ++ +L I + D A Y+CA
Sbjct: 82 GVPSRFSGSKDASTNAGLLLISGLQSEDEADYYCA 116
>gi|239755286 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 296
Score = 35.4 bits (80), Expect = 0.027
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 10/122 (8%)
Query: 36 TRVLCCAVICLLGAGLSNAGVMQNPRHLVRRRGQEARLRCSPMKGHSH-VYWYRQLPEEG 94
T++L V+ L GA + + Q+P L G + C +G S+ + WY+Q P +
Sbjct: 178 TQLLGLLVLWLPGARC-DIQMTQSPSSLSASVGDRVTITCRASQGISNNLNWYQQKPGKT 236
Query: 95 LKFMVYLQKENIIDESGMPKERFSAEFPKEGPSILRIQQVVRGDSAAYFCA---SSPPTL 151
K ++Y +SG+P RFS + L I + D A Y+C S+ PT+
Sbjct: 237 PKLLIYAASSL---QSGIP-SRFS-DSGSGTDYTLTISSLQPEDFATYYCQQSDSTSPTV 291
Query: 152 MQ 153
+Q
Sbjct: 292 LQ 293
>gi|169194776 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 242
Score = 35.4 bits (80), Expect = 0.027
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 10/122 (8%)
Query: 36 TRVLCCAVICLLGAGLSNAGVMQNPRHLVRRRGQEARLRCSPMKGHSH-VYWYRQLPEEG 94
T++L V+ L GA + + Q+P L G + C +G S+ + WY+Q P +
Sbjct: 124 TQLLGLLVLWLPGARC-DIQMTQSPSSLSASVGDRVTITCRASQGISNNLNWYQQKPGKT 182
Query: 95 LKFMVYLQKENIIDESGMPKERFSAEFPKEGPSILRIQQVVRGDSAAYFCA---SSPPTL 151
K ++Y +SG+P RFS + L I + D A Y+C S+ PT+
Sbjct: 183 PKLLIYAASSL---QSGIP-SRFS-DSGSGTDYTLTISSLQPEDFATYYCQQSDSTSPTV 237
Query: 152 MQ 153
+Q
Sbjct: 238 LQ 239
>gi|169190399 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 242
Score = 35.4 bits (80), Expect = 0.027
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 10/122 (8%)
Query: 36 TRVLCCAVICLLGAGLSNAGVMQNPRHLVRRRGQEARLRCSPMKGHSH-VYWYRQLPEEG 94
T++L V+ L GA + + Q+P L G + C +G S+ + WY+Q P +
Sbjct: 124 TQLLGLLVLWLPGARC-DIQMTQSPSSLSASVGDRVTITCRASQGISNNLNWYQQKPGKT 182
Query: 95 LKFMVYLQKENIIDESGMPKERFSAEFPKEGPSILRIQQVVRGDSAAYFCA---SSPPTL 151
K ++Y +SG+P RFS + L I + D A Y+C S+ PT+
Sbjct: 183 PKLLIYAASSL---QSGIP-SRFS-DSGSGTDYTLTISSLQPEDFATYYCQQSDSTSPTV 237
Query: 152 MQ 153
+Q
Sbjct: 238 LQ 239
>gi|239753214 PREDICTED: similar to hCG2043206 [Homo sapiens]
Length = 157
Score = 33.9 bits (76), Expect = 0.079
Identities = 29/104 (27%), Positives = 44/104 (42%), Gaps = 16/104 (15%)
Query: 58 QNPRHLVRRRGQEARLRC--SPMKGHSHVYWYRQLPEEGLKFMVYLQKENIIDESGMPKE 115
Q+P L G+ A L C S S++ WY+Q P + + ++Y +G+P
Sbjct: 31 QSPATLSLSPGERATLSCRASQSVSSSYLSWYQQKPGQAPRLLIYGASTR---ATGIP-- 85
Query: 116 RFSAEFPKEGPS---ILRIQQVVRGDSAAYFCASS---PPTLMQ 153
A F G L I + D A Y+C PPT++Q
Sbjct: 86 ---ARFSGSGSGTDFTLTISSLQPEDFAVYYCQQDYNLPPTVIQ 126
>gi|169163270 PREDICTED: similar to hCG2043206 [Homo sapiens]
Length = 151
Score = 33.9 bits (76), Expect = 0.079
Identities = 29/104 (27%), Positives = 44/104 (42%), Gaps = 16/104 (15%)
Query: 58 QNPRHLVRRRGQEARLRC--SPMKGHSHVYWYRQLPEEGLKFMVYLQKENIIDESGMPKE 115
Q+P L G+ A L C S S++ WY+Q P + + ++Y +G+P
Sbjct: 26 QSPATLSLSPGERATLSCRASQSVSSSYLSWYQQKPGQAPRLLIYGASTR---ATGIP-- 80
Query: 116 RFSAEFPKEGPS---ILRIQQVVRGDSAAYFCASS---PPTLMQ 153
A F G L I + D A Y+C PPT++Q
Sbjct: 81 ---ARFSGSGSGTDFTLTISSLQPEDFAVYYCQQDYNLPPTVIQ 121
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.136 0.450
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,205,249
Number of Sequences: 37866
Number of extensions: 371894
Number of successful extensions: 978
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 49
Number of HSP's that attempted gapping in prelim test: 926
Number of HSP's gapped (non-prelim): 92
length of query: 182
length of database: 18,247,518
effective HSP length: 96
effective length of query: 86
effective length of database: 14,612,382
effective search space: 1256664852
effective search space used: 1256664852
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.