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Search of human proteins with 239754736
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239754736 PREDICTED: similar to hCG2039503 [Homo sapiens]
(135 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239754736 PREDICTED: similar to hCG2039503 [Homo sapiens] 289 5e-79
gi|239754726 PREDICTED: similar to hCG2002986 [Homo sapiens] 138 2e-33
gi|239754728 PREDICTED: similar to hCG1737376 [Homo sapiens] 127 4e-30
gi|239749275 PREDICTED: hypothetical protein XP_002346976 [Homo ... 124 2e-29
gi|239754724 PREDICTED: similar to hCG1737365 [Homo sapiens] 110 5e-25
gi|239749277 PREDICTED: hypothetical protein XP_002346977 [Homo ... 110 5e-25
gi|239754738 PREDICTED: similar to hCG2039504 [Homo sapiens] 106 7e-24
gi|239754730 PREDICTED: similar to hCG1737378 [Homo sapiens] 100 5e-22
gi|239754734 PREDICTED: similar to hCG2002964 [Homo sapiens] 99 1e-21
gi|239754732 PREDICTED: similar to hCG1737379 [Homo sapiens] 73 6e-14
gi|239749279 PREDICTED: hypothetical protein XP_002346978 [Homo ... 73 6e-14
gi|239754744 PREDICTED: similar to hCG2043257 [Homo sapiens] 60 7e-10
gi|239754742 PREDICTED: similar to hCG2002958 [Homo sapiens] 56 1e-08
gi|239749273 PREDICTED: similar to hCG2039484 [Homo sapiens] 56 1e-08
gi|239754740 PREDICTED: similar to hCG2039506 [Homo sapiens] 45 1e-05
gi|169218204 PREDICTED: similar to pre-B lymphocyte gene 1 [Homo... 43 9e-05
gi|169174843 PREDICTED: similar to hCG1742442 [Homo sapiens] 42 1e-04
gi|239743839 PREDICTED: hypothetical protein XP_002342967 [Homo ... 42 1e-04
gi|239755286 PREDICTED: similar to hCG1742442 [Homo sapiens] 40 4e-04
gi|169194776 PREDICTED: similar to hCG1742442 [Homo sapiens] 40 4e-04
gi|169190399 PREDICTED: similar to hCG1742442 [Homo sapiens] 40 4e-04
gi|169163724 PREDICTED: similar to hCG26659 [Homo sapiens] 40 6e-04
gi|239747852 PREDICTED: hypothetical protein XP_002346449 [Homo ... 40 6e-04
gi|169163023 PREDICTED: similar to hCG26659 [Homo sapiens] 40 6e-04
gi|169167318 PREDICTED: similar to hCG2042707 [Homo sapiens] 39 0.002
gi|239757668 PREDICTED: similar to Ig lambda chain [Homo sapiens] 37 0.004
gi|239753214 PREDICTED: similar to hCG2043206 [Homo sapiens] 37 0.004
gi|239753212 PREDICTED: similar to hCG1686089 [Homo sapiens] 36 0.008
gi|239749464 PREDICTED: hypothetical protein XP_002347049 [Homo ... 36 0.008
gi|169163270 PREDICTED: similar to hCG2043206 [Homo sapiens] 35 0.018
>gi|239754736 PREDICTED: similar to hCG2039503 [Homo sapiens]
Length = 135
Score = 289 bits (739), Expect = 5e-79
Identities = 135/135 (100%), Positives = 135/135 (100%)
Query: 1 MDIWLLCWVTLCLLAAGHSEPGVSQTPRHKVTNMGQEVILRCDPSSGHMFVHWYRQNLRQ 60
MDIWLLCWVTLCLLAAGHSEPGVSQTPRHKVTNMGQEVILRCDPSSGHMFVHWYRQNLRQ
Sbjct: 1 MDIWLLCWVTLCLLAAGHSEPGVSQTPRHKVTNMGQEVILRCDPSSGHMFVHWYRQNLRQ 60
Query: 61 EMKLLISFQYQNIAVDSGMPKERFTAERPNGTSSTLKIHPAEPRDSAVYLYSSGGTAWLS 120
EMKLLISFQYQNIAVDSGMPKERFTAERPNGTSSTLKIHPAEPRDSAVYLYSSGGTAWLS
Sbjct: 61 EMKLLISFQYQNIAVDSGMPKERFTAERPNGTSSTLKIHPAEPRDSAVYLYSSGGTAWLS 120
Query: 121 QFPPGCKPSGCSSPS 135
QFPPGCKPSGCSSPS
Sbjct: 121 QFPPGCKPSGCSSPS 135
>gi|239754726 PREDICTED: similar to hCG2002986 [Homo sapiens]
Length = 189
Score = 138 bits (347), Expect = 2e-33
Identities = 69/129 (53%), Positives = 88/129 (68%), Gaps = 1/129 (0%)
Query: 1 MDIWLLCWVTLCLLAAGHSEPGVSQTPRHKVTNMGQEVILRCDPSSGHMFVHWYRQNLRQ 60
MD W LC V+LC+L A H++ GV Q+PRH+VT MGQEV LRC P SGH ++ WYRQ + +
Sbjct: 38 MDSWTLCCVSLCILVAKHTDAGVIQSPRHEVTEMGQEVTLRCKPISGHDYLFWYRQTMMR 97
Query: 61 EMKLLISFQYQNIAVDSGMPKERFTAERPNGTSSTLKIHPAEPRDSAVYLYSSGGTAWLS 120
++LLI F DSGMP++RF+A+ PN + STLKI P+EPRDSAVY +S L
Sbjct: 98 GLELLIYFNNNVPIDDSGMPEDRFSAKMPNASFSTLKIQPSEPRDSAVYFCASSLATALQ 157
Query: 121 QFP-PGCKP 128
P P KP
Sbjct: 158 NHPFPVQKP 166
>gi|239754728 PREDICTED: similar to hCG1737376 [Homo sapiens]
Length = 170
Score = 127 bits (318), Expect = 4e-30
Identities = 68/125 (54%), Positives = 83/125 (66%), Gaps = 1/125 (0%)
Query: 5 LLCWVTLCLLAAGHSEPGVSQTPRHKVTNMGQEVILRCDPSSGHMFVHWYRQNLRQEMKL 64
LLC V LCLL + V+QTPRHKVT MGQEV +RC P GH V WYRQ + Q ++L
Sbjct: 5 LLCCVVLCLLGEELIDARVTQTPRHKVTEMGQEVTMRCQPILGHNTVFWYRQTMMQGLEL 64
Query: 65 LISFQYQNIAVDSGMPKERFTAERPNGTSSTLKIHPAEPRDSAVYLYSSG-GTAWLSQFP 123
L F+ + DSGMPK+RF+AE P+ T +TLKI P+EPRDSAVY +SG TA +
Sbjct: 65 LAYFRNRAPLDDSGMPKDRFSAEMPDATLATLKIQPSEPRDSAVYFCASGLVTALQNHLL 124
Query: 124 PGCKP 128
P KP
Sbjct: 125 PVQKP 129
>gi|239749275 PREDICTED: hypothetical protein XP_002346976 [Homo
sapiens]
Length = 245
Score = 124 bits (311), Expect = 2e-29
Identities = 64/125 (51%), Positives = 82/125 (65%), Gaps = 1/125 (0%)
Query: 5 LLCWVTLCLLAAGHSEPGVSQTPRHKVTNMGQEVILRCDPSSGHMFVHWYRQNLRQEMKL 64
LL WV CLL A H+ GVSQ+P +KVT G++V LRCDP SGH ++WYRQ+L Q ++
Sbjct: 85 LLFWVAFCLLGADHTGAGVSQSPSNKVTEKGKDVELRCDPISGHTALYWYRQSLGQGLEF 144
Query: 65 LISFQYQNIAVDSGMPKERFTAERPNGTSSTLKIHPAEPRDSAVYLYSSG-GTAWLSQFP 123
LI FQ + SG+P +RF+AER G+ STL I + DSAVYL +S TAW S+
Sbjct: 145 LIYFQGNSAPDKSGLPSDRFSAERTGGSVSTLTIQRTQQEDSAVYLCASSLATAWHSRLL 204
Query: 124 PGCKP 128
P KP
Sbjct: 205 PAHKP 209
>gi|239754724 PREDICTED: similar to hCG1737365 [Homo sapiens]
Length = 147
Score = 110 bits (274), Expect = 5e-25
Identities = 56/109 (51%), Positives = 70/109 (64%)
Query: 5 LLCWVTLCLLAAGHSEPGVSQTPRHKVTNMGQEVILRCDPSSGHMFVHWYRQNLRQEMKL 64
LLCWV CLL E GV Q+PR+K+ Q V C+P SGH ++WY QNL Q +L
Sbjct: 34 LLCWVAFCLLVEELIEAGVVQSPRYKIIEKKQPVAFWCNPISGHNTLYWYLQNLGQGPEL 93
Query: 65 LISFQYQNIAVDSGMPKERFTAERPNGTSSTLKIHPAEPRDSAVYLYSS 113
LI ++ + DS +PK+RF+AER G STLKI PAE DSAVYL +S
Sbjct: 94 LIRYENEEAVDDSQLPKDRFSAERLKGVDSTLKIQPAELGDSAVYLCAS 142
>gi|239749277 PREDICTED: hypothetical protein XP_002346977 [Homo
sapiens]
Length = 118
Score = 110 bits (274), Expect = 5e-25
Identities = 56/109 (51%), Positives = 70/109 (64%)
Query: 5 LLCWVTLCLLAAGHSEPGVSQTPRHKVTNMGQEVILRCDPSSGHMFVHWYRQNLRQEMKL 64
LLCWV CLL E GV Q+PR+K+ Q V C+P SGH ++WY QNL Q +L
Sbjct: 5 LLCWVAFCLLVEELIEAGVVQSPRYKIIEKKQPVAFWCNPISGHNTLYWYLQNLGQGPEL 64
Query: 65 LISFQYQNIAVDSGMPKERFTAERPNGTSSTLKIHPAEPRDSAVYLYSS 113
LI ++ + DS +PK+RF+AER G STLKI PAE DSAVYL +S
Sbjct: 65 LIRYENEEAVDDSQLPKDRFSAERLKGVDSTLKIQPAELGDSAVYLCAS 113
>gi|239754738 PREDICTED: similar to hCG2039504 [Homo sapiens]
Length = 182
Score = 106 bits (264), Expect = 7e-24
Identities = 54/113 (47%), Positives = 66/113 (58%)
Query: 1 MDIWLLCWVTLCLLAAGHSEPGVSQTPRHKVTNMGQEVILRCDPSSGHMFVHWYRQNLRQ 60
MD +LC +CLL AG S GV Q PRH V GQE LRC P GH V+WYRQ +
Sbjct: 34 MDTRVLCCAVICLLGAGLSNAGVMQNPRHLVRRRGQEARLRCSPMKGHSHVYWYRQLPEE 93
Query: 61 EMKLLISFQYQNIAVDSGMPKERFTAERPNGTSSTLKIHPAEPRDSAVYLYSS 113
+K ++ Q +NI +SGMPKERF+AE P S L+I DSA Y +S
Sbjct: 94 GLKFMVYLQKENIIDESGMPKERFSAEFPKEGPSILRIQQVVRGDSAAYFCAS 146
>gi|239754730 PREDICTED: similar to hCG1737378 [Homo sapiens]
Length = 179
Score = 100 bits (248), Expect = 5e-22
Identities = 50/100 (50%), Positives = 63/100 (63%)
Query: 14 LAAGHSEPGVSQTPRHKVTNMGQEVILRCDPSSGHMFVHWYRQNLRQEMKLLISFQYQNI 73
L H E GV+Q P H V GQ V LRCDP SGH ++WYR+ + +E+K L+ F ++
Sbjct: 9 LPTEHIEAGVTQFPSHSVIEKGQTVTLRCDPISGHDNLYWYRRVMGKEIKFLLHFVKESK 68
Query: 74 AVDSGMPKERFTAERPNGTSSTLKIHPAEPRDSAVYLYSS 113
+SGMP RF AER GT STLK+ PAE DS VY +S
Sbjct: 69 QDESGMPNNRFLAERTGGTYSTLKVQPAELEDSGVYFCAS 108
>gi|239754734 PREDICTED: similar to hCG2002964 [Homo sapiens]
Length = 122
Score = 99.0 bits (245), Expect = 1e-21
Identities = 51/114 (44%), Positives = 70/114 (61%)
Query: 7 CWVTLCLLAAGHSEPGVSQTPRHKVTNMGQEVILRCDPSSGHMFVHWYRQNLRQEMKLLI 66
C LCLLAAG V+QTP+H V GQ+ L C P GH +V WY+Q L+ E K LI
Sbjct: 7 CITILCLLAAGSPGEEVAQTPKHLVRGEGQKAKLYCAPIKGHSYVFWYQQVLKNEFKFLI 66
Query: 67 SFQYQNIAVDSGMPKERFTAERPNGTSSTLKIHPAEPRDSAVYLYSSGGTAWLS 120
SFQ +N+ ++GMPKERF+A+ + +L+I + DSAVY +S + L+
Sbjct: 67 SFQNENVFDETGMPKERFSAKCLPNSPCSLEIQATKLEDSAVYFCASSQSTVLN 120
>gi|239754732 PREDICTED: similar to hCG1737379 [Homo sapiens]
Length = 167
Score = 73.2 bits (178), Expect = 6e-14
Identities = 43/129 (33%), Positives = 64/129 (49%), Gaps = 6/129 (4%)
Query: 5 LLCWVTLCLLAAGHSEPGVSQTPRHKVTNMGQEVILRCDPSSGHMFVHWYRQNLRQEMKL 64
LL W+ LCLL GH + V Q PR++VT G+ V L C + H ++WY+Q Q KL
Sbjct: 5 LLHWMALCLLGTGHGDAMVIQNPRYQVTQFGKPVTLSCSQTLNHNVMYWYQQKSSQAPKL 64
Query: 65 LISFQYQNIAVDSGMPKERFTAERPNGTSSTLKIHPAEPRDSAVYLYSSGGTAWLSQF-- 122
L + ++ ++ P + F + RPN + L I D+A+YL ++ L F
Sbjct: 65 LFHYYDKDFNNEADTP-DNFQSRRPNTSFCFLDIRSPGLGDAAMYLCATSRDTELQCFLL 123
Query: 123 ---PPGCKP 128
P C P
Sbjct: 124 SVHKPHCFP 132
>gi|239749279 PREDICTED: hypothetical protein XP_002346978 [Homo
sapiens]
Length = 167
Score = 73.2 bits (178), Expect = 6e-14
Identities = 43/129 (33%), Positives = 64/129 (49%), Gaps = 6/129 (4%)
Query: 5 LLCWVTLCLLAAGHSEPGVSQTPRHKVTNMGQEVILRCDPSSGHMFVHWYRQNLRQEMKL 64
LL W+ LCLL GH + V Q PR++VT G+ V L C + H ++WY+Q Q KL
Sbjct: 5 LLHWMALCLLGTGHGDAMVIQNPRYQVTQFGKPVTLSCSQTLNHNVMYWYQQKSSQAPKL 64
Query: 65 LISFQYQNIAVDSGMPKERFTAERPNGTSSTLKIHPAEPRDSAVYLYSSGGTAWLSQF-- 122
L + ++ ++ P + F + RPN + L I D+A+YL ++ L F
Sbjct: 65 LFHYYDKDFNNEADTP-DNFQSRRPNTSFCFLDIRSPGLGDAAMYLCATSRDTELQCFLL 123
Query: 123 ---PPGCKP 128
P C P
Sbjct: 124 SVHKPHCFP 132
>gi|239754744 PREDICTED: similar to hCG2043257 [Homo sapiens]
Length = 132
Score = 59.7 bits (143), Expect = 7e-10
Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 1/113 (0%)
Query: 1 MDIWLLCWVTLCLLAAGHSEPGVSQTPRHKVTNMGQEVILRCDPSSGHMFVHWYRQNLRQ 60
M I LLC++ L AG E + QTPR+ V G+++ L C + GH ++WY+Q+
Sbjct: 1 MTIRLLCYMGFYFLGAGLMEADIYQTPRYLVIGTGKKITLECSQTMGHDKMYWYQQDPGM 60
Query: 61 EMKLLISFQYQNIAVDSGMPKERFTAERPNGTSSTLKIHPAEPRDSAVYLYSS 113
E+ LI + Y + + G T R L + A P ++ YL +S
Sbjct: 61 ELH-LIHYSYGVNSTEKGDLSSESTVSRIRTEHFPLTLESARPSHTSQYLCAS 112
>gi|239754742 PREDICTED: similar to hCG2002958 [Homo sapiens]
Length = 132
Score = 55.8 bits (133), Expect = 1e-08
Identities = 27/97 (27%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Query: 13 LLAAGHSEPGVSQTPRHKVTNMGQEVILRCDPSSGHMFVHWYRQNLRQEMKLLISFQYQN 72
LL G + V+QTPR+++T G+ ++L C + GH ++WYRQ+ ++ LI + +
Sbjct: 13 LLGTGSMDADVTQTPRNRITKTGKRIMLECSQTKGHDRMYWYRQDPGLGLQ-LIYYSFDV 71
Query: 73 IAVDSGMPKERFTAERPNGTSSTLKIHPAEPRDSAVY 109
++ G + ++ R +L + A P +A+Y
Sbjct: 72 KDINKGEISDGYSVSRQAQAKFSLSLESAIPNQTALY 108
>gi|239749273 PREDICTED: similar to hCG2039484 [Homo sapiens]
Length = 235
Score = 55.8 bits (133), Expect = 1e-08
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 1/113 (0%)
Query: 1 MDIWLLCWVTLCLLAAGHSEPGVSQTPRHKVTNMGQEVILRCDPSSGHMFVHWYRQNLRQ 60
M + LLC LL AG GV+QTP+ +V GQ + L C H +++WYRQ+
Sbjct: 15 MSLGLLCCGAFSLLWAGPVNAGVTQTPKFRVLKTGQSMTLLCAQDMNHEYMYWYRQDPGM 74
Query: 61 EMKLLISFQYQNIAVDSGMPKERFTAERPNGTSSTLKIHPAEPRDSAVYLYSS 113
++ LI + G + + R + L + A P ++VY +S
Sbjct: 75 GLR-LIHYSVGEGTTAKGEVPDGYNVSRLKKQNFLLGLESAAPSQTSVYFCAS 126
>gi|239754740 PREDICTED: similar to hCG2039506 [Homo sapiens]
Length = 170
Score = 45.4 bits (106), Expect = 1e-05
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 6/99 (6%)
Query: 23 VSQTPRHKVTNMGQEVILRC---DPSSGHMFVHWYRQNLRQEMKLLI-SFQYQNIAVDSG 78
VSQ P + G V + C D + MF WYRQ +Q + L+ S + + G
Sbjct: 37 VSQHPSWVICKSGTSVKIECRSLDFQATTMF--WYRQFPKQSLMLMATSNEGSKATYEQG 94
Query: 79 MPKERFTAERPNGTSSTLKIHPAEPRDSAVYLYSSGGTA 117
+ K++F + T STL + A P DS+ Y+ S+ TA
Sbjct: 95 VEKDKFLINHASLTLSTLTVTSAHPEDSSFYICSARDTA 133
>gi|169218204 PREDICTED: similar to pre-B lymphocyte gene 1 [Homo
sapiens]
Length = 123
Score = 42.7 bits (99), Expect = 9e-05
Identities = 35/120 (29%), Positives = 54/120 (45%), Gaps = 11/120 (9%)
Query: 6 LCWVTLCLLAAGHSEPGVSQTPRHKVTNMGQEVILRCDPSSG-HMFVHWYRQNLRQEMKL 64
L + L L + ++Q+P ++G V + C S G ++ WY+Q + KL
Sbjct: 9 LLGLLLLWLPGARCDIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKL 68
Query: 65 LISFQYQNIAVDSGMPKERFTAERPNGTSSTLKIHPAEPRDSAVYLYSSGGTAWLSQFPP 124
LI Y + SG+P RF+ +GT TL I +P D A Y L+ +PP
Sbjct: 69 LI---YAASTLQSGVPS-RFSGSG-SGTEFTLTISSLQPEDFATYYCQQ-----LNSYPP 118
>gi|169174843 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 276
Score = 42.4 bits (98), Expect = 1e-04
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 23 VSQTPRHKVTNMGQEVILRCDPSSG-HMFVHWYRQNLRQEMKLLISFQYQNIAVDSGMPK 81
++Q+P ++G V + C S G ++WY+Q R+ KLLI Y ++ SG+P
Sbjct: 177 MTQSPSSLSASVGGRVTITCRASQGISNNLNWYQQKPRKTPKLLI---YAASSLQSGIP- 232
Query: 82 ERFTAERPNGTSSTLKIHPAEPRDSAVY 109
RF ++ +GT TL I +P D A Y
Sbjct: 233 SRF-SDSGSGTDYTLTISSLQPEDFATY 259
>gi|239743839 PREDICTED: hypothetical protein XP_002342967 [Homo
sapiens]
Length = 761
Score = 42.4 bits (98), Expect = 1e-04
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 23 VSQTPRHKVTNMGQEVILRCDPSSG-HMFVHWYRQNLRQEMKLLISFQYQNIAVDSGMPK 81
++Q+P ++G V + C S G ++WY+Q R+ KLLI Y ++ SG+P
Sbjct: 662 MTQSPSSLSASVGGRVTITCRASQGISNNLNWYQQKPRKTPKLLI---YAASSLQSGIP- 717
Query: 82 ERFTAERPNGTSSTLKIHPAEPRDSAVY 109
RF ++ +GT TL I +P D A Y
Sbjct: 718 SRF-SDSGSGTDYTLTISSLQPEDFATY 744
>gi|239755286 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 296
Score = 40.4 bits (93), Expect = 4e-04
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 23 VSQTPRHKVTNMGQEVILRCDPSSG-HMFVHWYRQNLRQEMKLLISFQYQNIAVDSGMPK 81
++Q+P ++G V + C S G ++WY+Q + KLLI Y ++ SG+P
Sbjct: 197 MTQSPSSLSASVGDRVTITCRASQGISNNLNWYQQKPGKTPKLLI---YAASSLQSGIPS 253
Query: 82 ERFTAERPNGTSSTLKIHPAEPRDSAVY 109
RF+ + +GT TL I +P D A Y
Sbjct: 254 -RFS-DSGSGTDYTLTISSLQPEDFATY 279
>gi|169194776 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 242
Score = 40.4 bits (93), Expect = 4e-04
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 23 VSQTPRHKVTNMGQEVILRCDPSSG-HMFVHWYRQNLRQEMKLLISFQYQNIAVDSGMPK 81
++Q+P ++G V + C S G ++WY+Q + KLLI Y ++ SG+P
Sbjct: 143 MTQSPSSLSASVGDRVTITCRASQGISNNLNWYQQKPGKTPKLLI---YAASSLQSGIPS 199
Query: 82 ERFTAERPNGTSSTLKIHPAEPRDSAVY 109
RF+ + +GT TL I +P D A Y
Sbjct: 200 -RFS-DSGSGTDYTLTISSLQPEDFATY 225
>gi|169190399 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 242
Score = 40.4 bits (93), Expect = 4e-04
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 23 VSQTPRHKVTNMGQEVILRCDPSSG-HMFVHWYRQNLRQEMKLLISFQYQNIAVDSGMPK 81
++Q+P ++G V + C S G ++WY+Q + KLLI Y ++ SG+P
Sbjct: 143 MTQSPSSLSASVGDRVTITCRASQGISNNLNWYQQKPGKTPKLLI---YAASSLQSGIPS 199
Query: 82 ERFTAERPNGTSSTLKIHPAEPRDSAVY 109
RF+ + +GT TL I +P D A Y
Sbjct: 200 -RFS-DSGSGTDYTLTISSLQPEDFATY 225
>gi|169163724 PREDICTED: similar to hCG26659 [Homo sapiens]
Length = 191
Score = 40.0 bits (92), Expect = 6e-04
Identities = 33/105 (31%), Positives = 48/105 (45%), Gaps = 6/105 (5%)
Query: 6 LCWVTLCLLAAGHSEPGVSQTPRHKVTNMGQEVILRCDPSSG-HMFVHWYRQNLRQEMKL 64
L + L L + V+Q+P ++G V + C S G + WY+Q Q L
Sbjct: 9 LLGLLLLWLRGARCDIQVTQSPSSLSASVGDRVTITCRASQGISNGLSWYQQKPGQAPTL 68
Query: 65 LISFQYQNIAVDSGMPKERFTAERPNGTSSTLKIHPAEPRDSAVY 109
LI Y ++ SG+P RF+ +GT TL I +P D A Y
Sbjct: 69 LI---YAASSLQSGVPS-RFSGSG-SGTDFTLTISSLQPEDVATY 108
>gi|239747852 PREDICTED: hypothetical protein XP_002346449 [Homo
sapiens]
Length = 155
Score = 40.0 bits (92), Expect = 6e-04
Identities = 33/105 (31%), Positives = 48/105 (45%), Gaps = 6/105 (5%)
Query: 6 LCWVTLCLLAAGHSEPGVSQTPRHKVTNMGQEVILRCDPSSG-HMFVHWYRQNLRQEMKL 64
L + L L + V+Q+P ++G V + C S G + WY+Q Q L
Sbjct: 9 LLGLLLLWLRGARCDIQVTQSPSSLSASVGDRVTITCRASQGISNGLSWYQQKPGQAPTL 68
Query: 65 LISFQYQNIAVDSGMPKERFTAERPNGTSSTLKIHPAEPRDSAVY 109
LI Y ++ SG+P RF+ +GT TL I +P D A Y
Sbjct: 69 LI---YAASSLQSGVPS-RFSGSG-SGTDFTLTISSLQPEDVATY 108
>gi|169163023 PREDICTED: similar to hCG26659 [Homo sapiens]
Length = 191
Score = 40.0 bits (92), Expect = 6e-04
Identities = 33/105 (31%), Positives = 48/105 (45%), Gaps = 6/105 (5%)
Query: 6 LCWVTLCLLAAGHSEPGVSQTPRHKVTNMGQEVILRCDPSSG-HMFVHWYRQNLRQEMKL 64
L + L L + V+Q+P ++G V + C S G + WY+Q Q L
Sbjct: 9 LLGLLLLWLRGARCDIQVTQSPSSLSASVGDRVTITCRASQGISNGLSWYQQKPGQAPTL 68
Query: 65 LISFQYQNIAVDSGMPKERFTAERPNGTSSTLKIHPAEPRDSAVY 109
LI Y ++ SG+P RF+ +GT TL I +P D A Y
Sbjct: 69 LI---YAASSLQSGVPS-RFSGSG-SGTDFTLTISSLQPEDVATY 108
>gi|169167318 PREDICTED: similar to hCG2042707 [Homo sapiens]
Length = 142
Score = 38.5 bits (88), Expect = 0.002
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Query: 23 VSQTPRHKVTNMGQEVILRCDPSSG-HMFVHWYRQNLRQEMKLLISFQYQNIAVDSGMPK 81
++Q+P ++G V + C S G + WY+Q + KLL+ Y ++SG+P
Sbjct: 35 MTQSPSSLSASVGDRVTITCRASQGISNSLAWYQQKPGKAPKLLL---YAASRLESGVPS 91
Query: 82 ERFTAERPNGTSSTLKIHPAEPRDSAVY 109
RF+ +GT TL I +P D A Y
Sbjct: 92 -RFSGSG-SGTDYTLTISSLQPEDFATY 117
>gi|239757668 PREDICTED: similar to Ig lambda chain [Homo sapiens]
Length = 288
Score = 37.4 bits (85), Expect = 0.004
Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 9/114 (7%)
Query: 4 WLLCWVTLCLLAAGHSEPGVSQTPRHKVTNMGQEVILRCDPSS----GHMFVHWYRQNLR 59
W L ++TL G P + GQ + + C +S G+ +V WY+Q+
Sbjct: 3 WALLFLTLLTQGTGSWAQSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPG 62
Query: 60 QEMKLLISFQYQNIAVDSGMPKERFTAERPNGTSSTLKIHPAEPRDSAVYLYSS 113
+ KL+I Y SG+ RF+ + +G +++L I + D A Y SS
Sbjct: 63 KAPKLMI---YDVSNRPSGV-SNRFSGSK-SGNTASLTISGLQAEDEADYYCSS 111
>gi|239753214 PREDICTED: similar to hCG2043206 [Homo sapiens]
Length = 157
Score = 37.4 bits (85), Expect = 0.004
Identities = 30/94 (31%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 18 HSEPGVSQTPRHKVTNMGQEVILRCDPSSG--HMFVHWYRQNLRQEMKLLISFQYQNIAV 75
H E ++Q+P + G+ L C S ++ WY+Q Q +LLI Y
Sbjct: 24 HGEIVMTQSPATLSLSPGERATLSCRASQSVSSSYLSWYQQKPGQAPRLLI---YGASTR 80
Query: 76 DSGMPKERFTAERPNGTSSTLKIHPAEPRDSAVY 109
+G+P RF+ +GT TL I +P D AVY
Sbjct: 81 ATGIPA-RFSGSG-SGTDFTLTISSLQPEDFAVY 112
>gi|239753212 PREDICTED: similar to hCG1686089 [Homo sapiens]
Length = 152
Score = 36.2 bits (82), Expect = 0.008
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 7/114 (6%)
Query: 6 LCWVTLCLLAAGHSEPGVSQTPRHKVTNMGQEVILRCDPSSG--HMFVHWYRQNLRQEMK 63
L ++ L L E ++Q+P + G+ L C S ++ WY+Q +
Sbjct: 7 LLFLLLLWLPDTTGEIVLTQSPATLSLSPGERATLSCGASQSVSSSYLAWYQQKPGLAPR 66
Query: 64 LLISFQYQNIAVDSGMPKERFTAERPNGTSSTLKIHPAEPRDSAVYLYSSGGTA 117
LLI Y + +G+P +RF+ +GT TL I EP D AVY G++
Sbjct: 67 LLI---YDASSRATGIP-DRFSGSG-SGTDFTLTISRLEPEDFAVYYCQQYGSS 115
>gi|239749464 PREDICTED: hypothetical protein XP_002347049 [Homo
sapiens]
Length = 152
Score = 36.2 bits (82), Expect = 0.008
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 7/114 (6%)
Query: 6 LCWVTLCLLAAGHSEPGVSQTPRHKVTNMGQEVILRCDPSSG--HMFVHWYRQNLRQEMK 63
L ++ L L E ++Q+P + G+ L C S ++ WY+Q +
Sbjct: 7 LLFLLLLWLPDTTGEIVLTQSPATLSLSPGERATLSCGASQSVSSSYLAWYQQKPGLAPR 66
Query: 64 LLISFQYQNIAVDSGMPKERFTAERPNGTSSTLKIHPAEPRDSAVYLYSSGGTA 117
LLI Y + +G+P +RF+ +GT TL I EP D AVY G++
Sbjct: 67 LLI---YDASSRATGIP-DRFSGSG-SGTDFTLTISRLEPEDFAVYYCQQYGSS 115
>gi|169163270 PREDICTED: similar to hCG2043206 [Homo sapiens]
Length = 151
Score = 35.0 bits (79), Expect = 0.018
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 7/106 (6%)
Query: 6 LCWVTLCLLAAGHSEPGVSQTPRHKVTNMGQEVILRCDPSSG--HMFVHWYRQNLRQEMK 63
L ++ L L E ++Q+P + G+ L C S ++ WY+Q Q +
Sbjct: 7 LLFLLLLWLPDTTGEIVMTQSPATLSLSPGERATLSCRASQSVSSSYLSWYQQKPGQAPR 66
Query: 64 LLISFQYQNIAVDSGMPKERFTAERPNGTSSTLKIHPAEPRDSAVY 109
LLI Y +G+P RF+ +GT TL I +P D AVY
Sbjct: 67 LLI---YGASTRATGIPA-RFSGSG-SGTDFTLTISSLQPEDFAVY 107
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.133 0.435
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,439,252
Number of Sequences: 37866
Number of extensions: 279423
Number of successful extensions: 835
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 796
Number of HSP's gapped (non-prelim): 67
length of query: 135
length of database: 18,247,518
effective HSP length: 91
effective length of query: 44
effective length of database: 14,801,712
effective search space: 651275328
effective search space used: 651275328
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.