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Search of human proteins with 239754728
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239754728 PREDICTED: similar to hCG1737376 [Homo sapiens]
(170 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239754728 PREDICTED: similar to hCG1737376 [Homo sapiens] 350 3e-97
gi|239754726 PREDICTED: similar to hCG2002986 [Homo sapiens] 209 7e-55
gi|239749275 PREDICTED: hypothetical protein XP_002346976 [Homo ... 141 2e-34
gi|239754738 PREDICTED: similar to hCG2039504 [Homo sapiens] 134 4e-32
gi|239754724 PREDICTED: similar to hCG1737365 [Homo sapiens] 131 2e-31
gi|239749277 PREDICTED: hypothetical protein XP_002346977 [Homo ... 131 2e-31
gi|239754736 PREDICTED: similar to hCG2039503 [Homo sapiens] 127 6e-30
gi|239754730 PREDICTED: similar to hCG1737378 [Homo sapiens] 118 3e-27
gi|239754734 PREDICTED: similar to hCG2002964 [Homo sapiens] 100 1e-21
gi|239754732 PREDICTED: similar to hCG1737379 [Homo sapiens] 92 3e-19
gi|239749279 PREDICTED: hypothetical protein XP_002346978 [Homo ... 92 3e-19
gi|239749273 PREDICTED: similar to hCG2039484 [Homo sapiens] 77 9e-15
gi|239754742 PREDICTED: similar to hCG2002958 [Homo sapiens] 75 4e-14
gi|239754744 PREDICTED: similar to hCG2043257 [Homo sapiens] 65 3e-11
gi|239754740 PREDICTED: similar to hCG2039506 [Homo sapiens] 54 5e-08
gi|239752152 PREDICTED: hypothetical protein XP_002348153 [Homo ... 50 9e-07
gi|169167318 PREDICTED: similar to hCG2042707 [Homo sapiens] 48 4e-06
gi|239755286 PREDICTED: similar to hCG1742442 [Homo sapiens] 47 8e-06
gi|169163724 PREDICTED: similar to hCG26659 [Homo sapiens] 47 8e-06
gi|169194776 PREDICTED: similar to hCG1742442 [Homo sapiens] 47 8e-06
gi|239747852 PREDICTED: hypothetical protein XP_002346449 [Homo ... 47 8e-06
gi|169190399 PREDICTED: similar to hCG1742442 [Homo sapiens] 47 8e-06
gi|169163023 PREDICTED: similar to hCG26659 [Homo sapiens] 47 8e-06
gi|239741653 PREDICTED: hypothetical protein XP_002342271 [Homo ... 46 1e-05
gi|169218204 PREDICTED: similar to pre-B lymphocyte gene 1 [Homo... 43 1e-04
gi|169174843 PREDICTED: similar to hCG1742442 [Homo sapiens] 43 1e-04
gi|239743839 PREDICTED: hypothetical protein XP_002342967 [Homo ... 43 1e-04
gi|169163335 PREDICTED: similar to hCG1742442 [Homo sapiens] 42 2e-04
gi|7019567 pre-B lymphocyte 3 [Homo sapiens] 39 0.003
gi|239753235 PREDICTED: similar to hCG36857 [Homo sapiens] 38 0.004
>gi|239754728 PREDICTED: similar to hCG1737376 [Homo sapiens]
Length = 170
Score = 350 bits (898), Expect = 3e-97
Identities = 170/170 (100%), Positives = 170/170 (100%)
Query: 1 MATRLLCCVVLCLLGEELIDARVTQTPRHKVTEMGQEVTMRCQPILGHNTVFWYRQTMMQ 60
MATRLLCCVVLCLLGEELIDARVTQTPRHKVTEMGQEVTMRCQPILGHNTVFWYRQTMMQ
Sbjct: 1 MATRLLCCVVLCLLGEELIDARVTQTPRHKVTEMGQEVTMRCQPILGHNTVFWYRQTMMQ 60
Query: 61 GLELLAYFRNRAPLDDSGMPKDRFSAEMPDATLATLKIQPSEPRDSAVYFCASGLVTALQ 120
GLELLAYFRNRAPLDDSGMPKDRFSAEMPDATLATLKIQPSEPRDSAVYFCASGLVTALQ
Sbjct: 61 GLELLAYFRNRAPLDDSGMPKDRFSAEMPDATLATLKIQPSEPRDSAVYFCASGLVTALQ 120
Query: 121 NHLLPVQKPWCFLFSSSTQQLSAAFLAPPLAQEVHRFRVPHVPRQGKNRS 170
NHLLPVQKPWCFLFSSSTQQLSAAFLAPPLAQEVHRFRVPHVPRQGKNRS
Sbjct: 121 NHLLPVQKPWCFLFSSSTQQLSAAFLAPPLAQEVHRFRVPHVPRQGKNRS 170
>gi|239754726 PREDICTED: similar to hCG2002986 [Homo sapiens]
Length = 189
Score = 209 bits (533), Expect = 7e-55
Identities = 100/145 (68%), Positives = 115/145 (79%), Gaps = 1/145 (0%)
Query: 6 LCCVVLCLLGEELIDARVTQTPRHKVTEMGQEVTMRCQPILGHNTVFWYRQTMMQGLELL 65
LCCV LC+L + DA V Q+PRH+VTEMGQEVT+RC+PI GH+ +FWYRQTMM+GLELL
Sbjct: 43 LCCVSLCILVAKHTDAGVIQSPRHEVTEMGQEVTLRCKPISGHDYLFWYRQTMMRGLELL 102
Query: 66 AYFRNRAPLDDSGMPKDRFSAEMPDATLATLKIQPSEPRDSAVYFCASGLVTALQNHLLP 125
YF N P+DDSGMP+DRFSA+MP+A+ +TLKIQPSEPRDSAVYFCAS L TALQNH P
Sbjct: 103 IYFNNNVPIDDSGMPEDRFSAKMPNASFSTLKIQPSEPRDSAVYFCASSLATALQNHPFP 162
Query: 126 VQKPWCFLFSSSTQQ-LSAAFLAPP 149
VQKPWCF FS L F PP
Sbjct: 163 VQKPWCFSFSFYLPAVLGKVFPVPP 187
>gi|239749275 PREDICTED: hypothetical protein XP_002346976 [Homo
sapiens]
Length = 245
Score = 141 bits (356), Expect = 2e-34
Identities = 74/156 (47%), Positives = 97/156 (62%), Gaps = 2/156 (1%)
Query: 1 MATRLLCCVVLCLLGEELIDARVTQTPRHKVTEMGQEVTMRCQPILGHNTVFWYRQTMMQ 60
M TRLL V CLLG + A V+Q+P +KVTE G++V +RC PI GH ++WYRQ++ Q
Sbjct: 81 MGTRLLFWVAFCLLGADHTGAGVSQSPSNKVTEKGKDVELRCDPISGHTALYWYRQSLGQ 140
Query: 61 GLELLAYFRNRAPLDDSGMPKDRFSAEMPDATLATLKIQPSEPRDSAVYFCASGLVTALQ 120
GLE L YF+ + D SG+P DRFSAE +++TL IQ ++ DSAVY CAS L TA
Sbjct: 141 GLEFLIYFQGNSAPDKSGLPSDRFSAERTGGSVSTLTIQRTQQEDSAVYLCASSLATAWH 200
Query: 121 NHLLPVQKPWCFLFSSSTQQLSAAF--LAPPLAQEV 154
+ LLP KP L L+ F L PP ++V
Sbjct: 201 SRLLPAHKPHPSLSLQLLDTLNRGFSLLLPPHGKQV 236
>gi|239754738 PREDICTED: similar to hCG2039504 [Homo sapiens]
Length = 182
Score = 134 bits (337), Expect = 4e-32
Identities = 66/135 (48%), Positives = 85/135 (62%), Gaps = 5/135 (3%)
Query: 1 MATRLLCCVVLCLLGEELIDARVTQTPRHKVTEMGQEVTMRCQPILGHNTVFWYRQTMMQ 60
M TR+LCC V+CLLG L +A V Q PRH V GQE +RC P+ GH+ V+WYRQ +
Sbjct: 34 MDTRVLCCAVICLLGAGLSNAGVMQNPRHLVRRRGQEARLRCSPMKGHSHVYWYRQLPEE 93
Query: 61 GLELLAYFRNRAPLDDSGMPKDRFSAEMPDATLATLKIQPSEPRDSAVYFCASGLVTALQ 120
GL+ + Y + +D+SGMPK+RFSAE P + L+IQ DSA YFCAS T +Q
Sbjct: 94 GLKFMVYLQKENIIDESGMPKERFSAEFPKEGPSILRIQQVVRGDSAAYFCASSPPTLMQ 153
Query: 121 NHLLPVQK-----PW 130
+H+L V K PW
Sbjct: 154 SHILSVHKHPPDLPW 168
>gi|239754724 PREDICTED: similar to hCG1737365 [Homo sapiens]
Length = 147
Score = 131 bits (330), Expect = 2e-31
Identities = 67/117 (57%), Positives = 79/117 (67%)
Query: 1 MATRLLCCVVLCLLGEELIDARVTQTPRHKVTEMGQEVTMRCQPILGHNTVFWYRQTMMQ 60
M TRLLC V CLL EELI+A V Q+PR+K+ E Q V C PI GHNT++WY Q + Q
Sbjct: 30 MGTRLLCWVAFCLLVEELIEAGVVQSPRYKIIEKKQPVAFWCNPISGHNTLYWYLQNLGQ 89
Query: 61 GLELLAYFRNRAPLDDSGMPKDRFSAEMPDATLATLKIQPSEPRDSAVYFCASGLVT 117
G ELL + N +DDS +PKDRFSAE +TLKIQP+E DSAVY CAS L T
Sbjct: 90 GPELLIRYENEEAVDDSQLPKDRFSAERLKGVDSTLKIQPAELGDSAVYLCASSLDT 146
>gi|239749277 PREDICTED: hypothetical protein XP_002346977 [Homo
sapiens]
Length = 118
Score = 131 bits (330), Expect = 2e-31
Identities = 67/117 (57%), Positives = 79/117 (67%)
Query: 1 MATRLLCCVVLCLLGEELIDARVTQTPRHKVTEMGQEVTMRCQPILGHNTVFWYRQTMMQ 60
M TRLLC V CLL EELI+A V Q+PR+K+ E Q V C PI GHNT++WY Q + Q
Sbjct: 1 MGTRLLCWVAFCLLVEELIEAGVVQSPRYKIIEKKQPVAFWCNPISGHNTLYWYLQNLGQ 60
Query: 61 GLELLAYFRNRAPLDDSGMPKDRFSAEMPDATLATLKIQPSEPRDSAVYFCASGLVT 117
G ELL + N +DDS +PKDRFSAE +TLKIQP+E DSAVY CAS L T
Sbjct: 61 GPELLIRYENEEAVDDSQLPKDRFSAERLKGVDSTLKIQPAELGDSAVYLCASSLDT 117
>gi|239754736 PREDICTED: similar to hCG2039503 [Homo sapiens]
Length = 135
Score = 127 bits (318), Expect = 6e-30
Identities = 68/125 (54%), Positives = 83/125 (66%), Gaps = 1/125 (0%)
Query: 5 LLCCVVLCLLGEELIDARVTQTPRHKVTEMGQEVTMRCQPILGHNTVFWYRQTMMQGLEL 64
LLC V LCLL + V+QTPRHKVT MGQEV +RC P GH V WYRQ + Q ++L
Sbjct: 5 LLCWVTLCLLAAGHSEPGVSQTPRHKVTNMGQEVILRCDPSSGHMFVHWYRQNLRQEMKL 64
Query: 65 LAYFRNRAPLDDSGMPKDRFSAEMPDATLATLKIQPSEPRDSAVYFCASGLVTALQNHLL 124
L F+ + DSGMPK+RF+AE P+ T +TLKI P+EPRDSAVY +SG TA +
Sbjct: 65 LISFQYQNIAVDSGMPKERFTAERPNGTSSTLKIHPAEPRDSAVYLYSSG-GTAWLSQFP 123
Query: 125 PVQKP 129
P KP
Sbjct: 124 PGCKP 128
>gi|239754730 PREDICTED: similar to hCG1737378 [Homo sapiens]
Length = 179
Score = 118 bits (295), Expect = 3e-27
Identities = 57/122 (46%), Positives = 77/122 (63%)
Query: 6 LCCVVLCLLGEELIDARVTQTPRHKVTEMGQEVTMRCQPILGHNTVFWYRQTMMQGLELL 65
+ C++ L E I+A VTQ P H V E GQ VT+RC PI GH+ ++WYR+ M + ++ L
Sbjct: 1 MSCILFLSLPTEHIEAGVTQFPSHSVIEKGQTVTLRCDPISGHDNLYWYRRVMGKEIKFL 60
Query: 66 AYFRNRAPLDDSGMPKDRFSAEMPDATLATLKIQPSEPRDSAVYFCASGLVTALQNHLLP 125
+F + D+SGMP +RF AE T +TLK+QP+E DS VYFCAS T L + L
Sbjct: 61 LHFVKESKQDESGMPNNRFLAERTGGTYSTLKVQPAELEDSGVYFCASSQDTVLHSRALA 120
Query: 126 VQ 127
VQ
Sbjct: 121 VQ 122
>gi|239754734 PREDICTED: similar to hCG2002964 [Homo sapiens]
Length = 122
Score = 99.8 bits (247), Expect = 1e-21
Identities = 50/119 (42%), Positives = 69/119 (57%)
Query: 1 MATRLLCCVVLCLLGEELIDARVTQTPRHKVTEMGQEVTMRCQPILGHNTVFWYRQTMMQ 60
M+ C +LCLL V QTP+H V GQ+ + C PI GH+ VFWY+Q +
Sbjct: 1 MSPIFTCITILCLLAAGSPGEEVAQTPKHLVRGEGQKAKLYCAPIKGHSYVFWYQQVLKN 60
Query: 61 GLELLAYFRNRAPLDDSGMPKDRFSAEMPDATLATLKIQPSEPRDSAVYFCASGLVTAL 119
+ L F+N D++GMPK+RFSA+ + +L+IQ ++ DSAVYFCAS T L
Sbjct: 61 EFKFLISFQNENVFDETGMPKERFSAKCLPNSPCSLEIQATKLEDSAVYFCASSQSTVL 119
>gi|239754732 PREDICTED: similar to hCG1737379 [Homo sapiens]
Length = 167
Score = 91.7 bits (226), Expect = 3e-19
Identities = 50/132 (37%), Positives = 74/132 (56%), Gaps = 1/132 (0%)
Query: 1 MATRLLCCVVLCLLGEELIDARVTQTPRHKVTEMGQEVTMRCQPILGHNTVFWYRQTMMQ 60
M LL + LCLLG DA V Q PR++VT+ G+ VT+ C L HN ++WY+Q Q
Sbjct: 1 MGPGLLHWMALCLLGTGHGDAMVIQNPRYQVTQFGKPVTLSCSQTLNHNVMYWYQQKSSQ 60
Query: 61 GLELLAYFRNRAPLDDSGMPKDRFSAEMPDATLATLKIQPSEPRDSAVYFCASGLVTALQ 120
+LL ++ ++ +++ P D F + P+ + L I+ D+A+Y CA+ T LQ
Sbjct: 61 APKLLFHYYDKDFNNEADTP-DNFQSRRPNTSFCFLDIRSPGLGDAAMYLCATSRDTELQ 119
Query: 121 NHLLPVQKPWCF 132
LL V KP CF
Sbjct: 120 CFLLSVHKPHCF 131
>gi|239749279 PREDICTED: hypothetical protein XP_002346978 [Homo
sapiens]
Length = 167
Score = 91.7 bits (226), Expect = 3e-19
Identities = 50/132 (37%), Positives = 74/132 (56%), Gaps = 1/132 (0%)
Query: 1 MATRLLCCVVLCLLGEELIDARVTQTPRHKVTEMGQEVTMRCQPILGHNTVFWYRQTMMQ 60
M LL + LCLLG DA V Q PR++VT+ G+ VT+ C L HN ++WY+Q Q
Sbjct: 1 MGPGLLHWMALCLLGTGHGDAMVIQNPRYQVTQFGKPVTLSCSQTLNHNVMYWYQQKSSQ 60
Query: 61 GLELLAYFRNRAPLDDSGMPKDRFSAEMPDATLATLKIQPSEPRDSAVYFCASGLVTALQ 120
+LL ++ ++ +++ P D F + P+ + L I+ D+A+Y CA+ T LQ
Sbjct: 61 APKLLFHYYDKDFNNEADTP-DNFQSRRPNTSFCFLDIRSPGLGDAAMYLCATSRDTELQ 119
Query: 121 NHLLPVQKPWCF 132
LL V KP CF
Sbjct: 120 CFLLSVHKPHCF 131
>gi|239749273 PREDICTED: similar to hCG2039484 [Homo sapiens]
Length = 235
Score = 76.6 bits (187), Expect = 9e-15
Identities = 53/169 (31%), Positives = 78/169 (46%), Gaps = 10/169 (5%)
Query: 1 MATRLLCCVVLCLLGEELIDARVTQTPRHKVTEMGQEVTMRCQPILGHNTVFWYRQTMMQ 60
M+ LLCC LL ++A VTQTP+ +V + GQ +T+ C + H ++WYRQ
Sbjct: 15 MSLGLLCCGAFSLLWAGPVNAGVTQTPKFRVLKTGQSMTLLCAQDMNHEYMYWYRQDPGM 74
Query: 61 GLELLAYFRNRAPLDDSGMPKDRFSAEMPDATLATLKIQPSEPRDSAVYFCASGLVTALQ 120
GL L+ Y +P D ++ L ++ + P ++VYFCAS T L
Sbjct: 75 GLRLIHYSVGEGTTAKGEVP-DGYNVSRLKKQNFLLGLESAAPSQTSVYFCASSYSTVLH 133
Query: 121 NHLLPVQK-------PWCFLFSSSTQQLSAAFLAP--PLAQEVHRFRVP 160
LL QK P FS + + F AP P + +H +VP
Sbjct: 134 GCLLSAQKGKGRCCPPPQHRFSDALGPSTENFGAPMGPGSASLHLCQVP 182
>gi|239754742 PREDICTED: similar to hCG2002958 [Homo sapiens]
Length = 132
Score = 74.7 bits (182), Expect = 4e-14
Identities = 38/113 (33%), Positives = 63/113 (55%), Gaps = 1/113 (0%)
Query: 1 MATRLLCCVVLCLLGEELIDARVTQTPRHKVTEMGQEVTMRCQPILGHNTVFWYRQTMMQ 60
MA+ L C LLG +DA VTQTPR+++T+ G+ + + C GH+ ++WYRQ
Sbjct: 1 MASLLFFCGAFYLLGTGSMDADVTQTPRNRITKTGKRIMLECSQTKGHDRMYWYRQDPGL 60
Query: 61 GLELLAYFRNRAPLDDSGMPKDRFSAEMPDATLATLKIQPSEPRDSAVYFCAS 113
GL+L+ Y + + + G D +S +L ++ + P +A+YFCA+
Sbjct: 61 GLQLIYYSFDVKDI-NKGEISDGYSVSRQAQAKFSLSLESAIPNQTALYFCAT 112
>gi|239754744 PREDICTED: similar to hCG2043257 [Homo sapiens]
Length = 132
Score = 65.1 bits (157), Expect = 3e-11
Identities = 39/132 (29%), Positives = 64/132 (48%), Gaps = 9/132 (6%)
Query: 1 MATRLLCCVVLCLLGEELIDARVTQTPRHKVTEMGQEVTMRCQPILGHNTVFWYRQTMMQ 60
M RLLC + LG L++A + QTPR+ V G+++T+ C +GH+ ++WY+Q
Sbjct: 1 MTIRLLCYMGFYFLGAGLMEADIYQTPRYLVIGTGKKITLECSQTMGHDKMYWYQQDPGM 60
Query: 61 GLELLAYFRNRAPLDDSGMPKDRFSAEMPDATLAT----LKIQPSEPRDSAVYFCASGLV 116
L L+ Y + K S+E + + T L ++ + P ++ Y CAS
Sbjct: 61 ELHLIHY-----SYGVNSTEKGDLSSESTVSRIRTEHFPLTLESARPSHTSQYLCASSEY 115
Query: 117 TALQNHLLPVQK 128
T L + QK
Sbjct: 116 TVLHGYRHSAQK 127
>gi|239754740 PREDICTED: similar to hCG2039506 [Homo sapiens]
Length = 170
Score = 54.3 bits (129), Expect = 5e-08
Identities = 40/124 (32%), Positives = 60/124 (48%), Gaps = 4/124 (3%)
Query: 9 VVLCLLGEEL-IDARVTQTPRHKVTEMGQEVTMRCQPI-LGHNTVFWYRQTMMQGLELLA 66
++L LLG + A V+Q P + + G V + C+ + T+FWYRQ Q L L+A
Sbjct: 22 LLLLLLGPGSGLGAVVSQHPSWVICKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMA 81
Query: 67 YFRNRAPLD-DSGMPKDRFSAEMPDATLATLKIQPSEPRDSAVYFCASGLVTALQNHLLP 125
+ + G+ KD+F TL+TL + + P DS+ Y C S TA P
Sbjct: 82 TSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPEDSSFYIC-SARDTAPGGDQTP 140
Query: 126 VQKP 129
Q+P
Sbjct: 141 RQEP 144
>gi|239752152 PREDICTED: hypothetical protein XP_002348153 [Homo
sapiens]
Length = 264
Score = 50.1 bits (118), Expect = 9e-07
Identities = 50/143 (34%), Positives = 67/143 (46%), Gaps = 25/143 (17%)
Query: 23 VTQTPRHKVTEMGQEVTMRCQPI---LGHNTVFWYRQTMMQGLELLAYFRNRAPLDDSGM 79
+TQ P T GQ VT+ C +G NTV WY+Q +LL Y N+ P SG+
Sbjct: 49 LTQPPSASGTP-GQRVTISCSGSSSNIGSNTVNWYQQLPGTAPKLLIYSNNQRP---SGV 104
Query: 80 PKDRFSAEMPDATLATLKIQPSEPRDSAVYFCASGLVTALQNHLLPVQKPWCFLFSSSTQ 139
P DRFS T A+L I + D A Y+CA A + L P C++F T+
Sbjct: 105 P-DRFSGS-KSGTSASLAISGLQSEDEADYYCA-----AWDDSL---NGPTCWVFGGGTK 154
Query: 140 -----QLSAA---FLAPPLAQEV 154
Q AA L PP ++E+
Sbjct: 155 LTVLGQPKAAPSVTLFPPSSEEL 177
>gi|169167318 PREDICTED: similar to hCG2042707 [Homo sapiens]
Length = 142
Score = 48.1 bits (113), Expect = 4e-06
Identities = 37/109 (33%), Positives = 56/109 (51%), Gaps = 7/109 (6%)
Query: 4 RLLCCVVLCLLGEELIDARVTQTPRHKVTEMGQEVTMRCQPILG-HNTVFWYRQTMMQGL 62
+LL ++L L G D ++TQ+P +G VT+ C+ G N++ WY+Q +
Sbjct: 17 QLLGLLLLWLPGTRC-DIQMTQSPSSLSASVGDRVTITCRASQGISNSLAWYQQKPGKAP 75
Query: 63 ELLAYFRNRAPLDDSGMPKDRFSAEMPDATLATLKIQPSEPRDSAVYFC 111
+LL Y +R +SG+P RFS T TL I +P D A Y+C
Sbjct: 76 KLLLYAASRL---ESGVPS-RFSGS-GSGTDYTLTISSLQPEDFATYYC 119
>gi|239755286 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 296
Score = 47.0 bits (110), Expect = 8e-06
Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 3 TRLLCCVVLCLLGEELIDARVTQTPRHKVTEMGQEVTMRCQPILG-HNTVFWYRQTMMQG 61
T+LL +VL L G D ++TQ+P +G VT+ C+ G N + WY+Q +
Sbjct: 178 TQLLGLLVLWLPGARC-DIQMTQSPSSLSASVGDRVTITCRASQGISNNLNWYQQKPGKT 236
Query: 62 LELLAYFRNRAPLDDSGMPKDRFSAEMPDATLATLKIQPSEPRDSAVYFC 111
+LL Y + SG+P RFS + T TL I +P D A Y+C
Sbjct: 237 PKLLIYAASSL---QSGIPS-RFS-DSGSGTDYTLTISSLQPEDFATYYC 281
>gi|169163724 PREDICTED: similar to hCG26659 [Homo sapiens]
Length = 191
Score = 47.0 bits (110), Expect = 8e-06
Identities = 39/115 (33%), Positives = 53/115 (46%), Gaps = 7/115 (6%)
Query: 4 RLLCCVVLCLLGEELIDARVTQTPRHKVTEMGQEVTMRCQPILG-HNTVFWYRQTMMQGL 62
+LL ++L L G D +VTQ+P +G VT+ C+ G N + WY+Q Q
Sbjct: 8 QLLGLLLLWLRGARC-DIQVTQSPSSLSASVGDRVTITCRASQGISNGLSWYQQKPGQAP 66
Query: 63 ELLAYFRNRAPLDDSGMPKDRFSAEMPDATLATLKIQPSEPRDSAVYFCASGLVT 117
LL Y + SG+P RFS T TL I +P D A Y+C T
Sbjct: 67 TLLIYAASSL---QSGVPS-RFSGS-GSGTDFTLTISSLQPEDVATYYCLQDYTT 116
>gi|169194776 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 242
Score = 47.0 bits (110), Expect = 8e-06
Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 3 TRLLCCVVLCLLGEELIDARVTQTPRHKVTEMGQEVTMRCQPILG-HNTVFWYRQTMMQG 61
T+LL +VL L G D ++TQ+P +G VT+ C+ G N + WY+Q +
Sbjct: 124 TQLLGLLVLWLPGARC-DIQMTQSPSSLSASVGDRVTITCRASQGISNNLNWYQQKPGKT 182
Query: 62 LELLAYFRNRAPLDDSGMPKDRFSAEMPDATLATLKIQPSEPRDSAVYFC 111
+LL Y + SG+P RFS + T TL I +P D A Y+C
Sbjct: 183 PKLLIYAASSL---QSGIPS-RFS-DSGSGTDYTLTISSLQPEDFATYYC 227
>gi|239747852 PREDICTED: hypothetical protein XP_002346449 [Homo
sapiens]
Length = 155
Score = 47.0 bits (110), Expect = 8e-06
Identities = 39/115 (33%), Positives = 53/115 (46%), Gaps = 7/115 (6%)
Query: 4 RLLCCVVLCLLGEELIDARVTQTPRHKVTEMGQEVTMRCQPILG-HNTVFWYRQTMMQGL 62
+LL ++L L G D +VTQ+P +G VT+ C+ G N + WY+Q Q
Sbjct: 8 QLLGLLLLWLRGARC-DIQVTQSPSSLSASVGDRVTITCRASQGISNGLSWYQQKPGQAP 66
Query: 63 ELLAYFRNRAPLDDSGMPKDRFSAEMPDATLATLKIQPSEPRDSAVYFCASGLVT 117
LL Y + SG+P RFS T TL I +P D A Y+C T
Sbjct: 67 TLLIYAASSL---QSGVPS-RFSGS-GSGTDFTLTISSLQPEDVATYYCLQDYTT 116
>gi|169190399 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 242
Score = 47.0 bits (110), Expect = 8e-06
Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 3 TRLLCCVVLCLLGEELIDARVTQTPRHKVTEMGQEVTMRCQPILG-HNTVFWYRQTMMQG 61
T+LL +VL L G D ++TQ+P +G VT+ C+ G N + WY+Q +
Sbjct: 124 TQLLGLLVLWLPGARC-DIQMTQSPSSLSASVGDRVTITCRASQGISNNLNWYQQKPGKT 182
Query: 62 LELLAYFRNRAPLDDSGMPKDRFSAEMPDATLATLKIQPSEPRDSAVYFC 111
+LL Y + SG+P RFS + T TL I +P D A Y+C
Sbjct: 183 PKLLIYAASSL---QSGIPS-RFS-DSGSGTDYTLTISSLQPEDFATYYC 227
>gi|169163023 PREDICTED: similar to hCG26659 [Homo sapiens]
Length = 191
Score = 47.0 bits (110), Expect = 8e-06
Identities = 39/115 (33%), Positives = 53/115 (46%), Gaps = 7/115 (6%)
Query: 4 RLLCCVVLCLLGEELIDARVTQTPRHKVTEMGQEVTMRCQPILG-HNTVFWYRQTMMQGL 62
+LL ++L L G D +VTQ+P +G VT+ C+ G N + WY+Q Q
Sbjct: 8 QLLGLLLLWLRGARC-DIQVTQSPSSLSASVGDRVTITCRASQGISNGLSWYQQKPGQAP 66
Query: 63 ELLAYFRNRAPLDDSGMPKDRFSAEMPDATLATLKIQPSEPRDSAVYFCASGLVT 117
LL Y + SG+P RFS T TL I +P D A Y+C T
Sbjct: 67 TLLIYAASSL---QSGVPS-RFSGS-GSGTDFTLTISSLQPEDVATYYCLQDYTT 116
>gi|239741653 PREDICTED: hypothetical protein XP_002342271 [Homo
sapiens]
Length = 636
Score = 46.2 bits (108), Expect = 1e-05
Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 3 TRLLCCVVLCLLGEELIDARVTQTPRHKVTEMGQEVTMRCQPILG-HNTVFWYRQTMMQG 61
T+LL +VL L G D ++TQ+P +G VT+ C+ G N + WY+Q +
Sbjct: 518 TQLLGLLVLWLPGARC-DIQMTQSPSSLSASVGDRVTITCRASQGISNNLNWYQQKPGKT 576
Query: 62 LELLAYFRNRAPLDDSGMPKDRFSAEMPDATLATLKIQPSEPRDSAVYFC 111
+LL Y + SG+P RFS A TL I+ +P D A Y+C
Sbjct: 577 PKLLIYAASSL---QSGIPS-RFSDSGSGADY-TLTIRSLQPEDFATYYC 621
>gi|169218204 PREDICTED: similar to pre-B lymphocyte gene 1 [Homo
sapiens]
Length = 123
Score = 43.1 bits (100), Expect = 1e-04
Identities = 36/109 (33%), Positives = 53/109 (48%), Gaps = 7/109 (6%)
Query: 4 RLLCCVVLCLLGEELIDARVTQTPRHKVTEMGQEVTMRCQPILGHNTVF-WYRQTMMQGL 62
+LL ++L L G D ++TQ+P +G VT+ C+ G ++ WY+Q +
Sbjct: 8 QLLGLLLLWLPGARC-DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAP 66
Query: 63 ELLAYFRNRAPLDDSGMPKDRFSAEMPDATLATLKIQPSEPRDSAVYFC 111
+LL Y A SG+P RFS T TL I +P D A Y+C
Sbjct: 67 KLLIY---AASTLQSGVPS-RFSGS-GSGTEFTLTISSLQPEDFATYYC 110
>gi|169174843 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 276
Score = 43.1 bits (100), Expect = 1e-04
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Query: 20 DARVTQTPRHKVTEMGQEVTMRCQPILG-HNTVFWYRQTMMQGLELLAYFRNRAPLDDSG 78
D ++TQ+P +G VT+ C+ G N + WY+Q + +LL Y + SG
Sbjct: 174 DIQMTQSPSSLSASVGGRVTITCRASQGISNNLNWYQQKPRKTPKLLIYAASSL---QSG 230
Query: 79 MPKDRFSAEMPDATLATLKIQPSEPRDSAVYFC 111
+P RFS + T TL I +P D A Y+C
Sbjct: 231 IPS-RFS-DSGSGTDYTLTISSLQPEDFATYYC 261
>gi|239743839 PREDICTED: hypothetical protein XP_002342967 [Homo
sapiens]
Length = 761
Score = 43.1 bits (100), Expect = 1e-04
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Query: 20 DARVTQTPRHKVTEMGQEVTMRCQPILG-HNTVFWYRQTMMQGLELLAYFRNRAPLDDSG 78
D ++TQ+P +G VT+ C+ G N + WY+Q + +LL Y + SG
Sbjct: 659 DIQMTQSPSSLSASVGGRVTITCRASQGISNNLNWYQQKPRKTPKLLIYAASSL---QSG 715
Query: 79 MPKDRFSAEMPDATLATLKIQPSEPRDSAVYFC 111
+P RFS + T TL I +P D A Y+C
Sbjct: 716 IPS-RFS-DSGSGTDYTLTISSLQPEDFATYYC 746
>gi|169163335 PREDICTED: similar to hCG1742442 [Homo sapiens]
Length = 295
Score = 42.4 bits (98), Expect = 2e-04
Identities = 37/110 (33%), Positives = 53/110 (48%), Gaps = 7/110 (6%)
Query: 3 TRLLCCVVLCLLGEELIDARVTQTPRHKVTEMGQEVTMRCQPILG-HNTVFWYRQTMMQG 61
T+LL + L L G D ++TQ+P +G VT+ C+ G N + WY+Q +
Sbjct: 177 TQLLGLLGLWLPGARC-DIQMTQSPSSLSASVGGRVTITCRASQGISNNLNWYQQKPGKT 235
Query: 62 LELLAYFRNRAPLDDSGMPKDRFSAEMPDATLATLKIQPSEPRDSAVYFC 111
+LL Y + SG+P RFS A TL I +P D A Y+C
Sbjct: 236 PKLLIYAASSL---QSGIPS-RFSDSGSGADY-TLTISSLQPEDFAAYYC 280
>gi|7019567 pre-B lymphocyte 3 [Homo sapiens]
Length = 123
Score = 38.5 bits (88), Expect = 0.003
Identities = 28/86 (32%), Positives = 36/86 (41%), Gaps = 6/86 (6%)
Query: 35 GQEVTMRCQPILGHNT-----VFWYRQTMMQGLELLAYFRNRAPLDDSGMPKDRFSAEMP 89
GQ + C H T V WY+Q L Y+R+ DRFSA
Sbjct: 33 GQVAQLSCTLSPQHVTIRDYGVSWYQQRAGSAPRYLLYYRSEEDHHRPADIPDRFSAAKD 92
Query: 90 DATLA-TLKIQPSEPRDSAVYFCASG 114
+A A L I P +P D A Y+C+ G
Sbjct: 93 EAHNACVLTISPVQPEDDADYYCSVG 118
>gi|239753235 PREDICTED: similar to hCG36857 [Homo sapiens]
Length = 108
Score = 38.1 bits (87), Expect = 0.004
Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 7/107 (6%)
Query: 4 RLLCCVVLCLLGEELIDARVTQTPRHKVTEMGQEVTMRCQPILG-HNTVFWYRQTMMQGL 62
+LL ++LCL + D ++TQ P +G VT+ CQ +N + WY+Q +
Sbjct: 8 QLLAFLLLCL-PDARCDIQMTQPPSSLSASVGDRVTVSCQASQSIYNYLNWYQQKPGKAP 66
Query: 63 ELLAYFRNRAPLDDSGMPKDRFSAEMPDATLATLKIQPSEPRDSAVY 109
+ L Y RA GMP +FS TL + +P D A Y
Sbjct: 67 KFLTY---RASSLQRGMP-SQFSGSGYGRDF-TLTVSSLQPEDFATY 108
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.135 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,411,472
Number of Sequences: 37866
Number of extensions: 255913
Number of successful extensions: 859
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 61
Number of HSP's that attempted gapping in prelim test: 835
Number of HSP's gapped (non-prelim): 77
length of query: 170
length of database: 18,247,518
effective HSP length: 95
effective length of query: 75
effective length of database: 14,650,248
effective search space: 1098768600
effective search space used: 1098768600
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.