Guide to the Human Genome
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Search of human proteins with 239754726

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239754726 PREDICTED: similar to hCG2002986 [Homo sapiens]
         (189 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239754726 PREDICTED: similar to hCG2002986 [Homo sapiens]          402   e-113
gi|239754728 PREDICTED: similar to hCG1737376 [Homo sapiens]          209   9e-55
gi|239749275 PREDICTED: hypothetical protein XP_002346976 [Homo ...   144   6e-35
gi|239754736 PREDICTED: similar to hCG2039503 [Homo sapiens]          138   3e-33
gi|239754738 PREDICTED: similar to hCG2039504 [Homo sapiens]          133   1e-31
gi|239754724 PREDICTED: similar to hCG1737365 [Homo sapiens]          125   2e-29
gi|239754730 PREDICTED: similar to hCG1737378 [Homo sapiens]          124   5e-29
gi|239749277 PREDICTED: hypothetical protein XP_002346977 [Homo ...   122   2e-28
gi|239754734 PREDICTED: similar to hCG2002964 [Homo sapiens]          104   5e-23
gi|239754732 PREDICTED: similar to hCG1737379 [Homo sapiens]           94   7e-20
gi|239749279 PREDICTED: hypothetical protein XP_002346978 [Homo ...    94   7e-20
gi|239749273 PREDICTED: similar to hCG2039484 [Homo sapiens]           77   7e-15
gi|239754742 PREDICTED: similar to hCG2002958 [Homo sapiens]           72   2e-13
gi|239754744 PREDICTED: similar to hCG2043257 [Homo sapiens]           63   2e-10
gi|169218204 PREDICTED: similar to pre-B lymphocyte gene 1 [Homo...    49   2e-06
gi|169163724 PREDICTED: similar to hCG26659 [Homo sapiens]             47   7e-06
gi|239747852 PREDICTED: hypothetical protein XP_002346449 [Homo ...    47   7e-06
gi|169163023 PREDICTED: similar to hCG26659 [Homo sapiens]             47   7e-06
gi|239741653 PREDICTED: hypothetical protein XP_002342271 [Homo ...    47   7e-06
gi|239754740 PREDICTED: similar to hCG2039506 [Homo sapiens]           47   1e-05
gi|239752152 PREDICTED: hypothetical protein XP_002348153 [Homo ...    47   1e-05
gi|169163335 PREDICTED: similar to hCG1742442 [Homo sapiens]           46   2e-05
gi|239755286 PREDICTED: similar to hCG1742442 [Homo sapiens]           46   2e-05
gi|169194776 PREDICTED: similar to hCG1742442 [Homo sapiens]           46   2e-05
gi|169167318 PREDICTED: similar to hCG2042707 [Homo sapiens]           46   2e-05
gi|169190399 PREDICTED: similar to hCG1742442 [Homo sapiens]           46   2e-05
gi|169174843 PREDICTED: similar to hCG1742442 [Homo sapiens]           45   5e-05
gi|239743839 PREDICTED: hypothetical protein XP_002342967 [Homo ...    45   5e-05
gi|239753212 PREDICTED: similar to hCG1686089 [Homo sapiens]           44   1e-04
gi|239749464 PREDICTED: hypothetical protein XP_002347049 [Homo ...    44   1e-04

>gi|239754726 PREDICTED: similar to hCG2002986 [Homo sapiens]
          Length = 189

 Score =  402 bits (1034), Expect = e-113
 Identities = 189/189 (100%), Positives = 189/189 (100%)

Query: 1   MSLTDAFCGDKMSQNSFLCSCSQRAWSGIFHICSHSAMDSWTLCCVSLCILVAKHTDAGV 60
           MSLTDAFCGDKMSQNSFLCSCSQRAWSGIFHICSHSAMDSWTLCCVSLCILVAKHTDAGV
Sbjct: 1   MSLTDAFCGDKMSQNSFLCSCSQRAWSGIFHICSHSAMDSWTLCCVSLCILVAKHTDAGV 60

Query: 61  IQSPRHEVTEMGQEVTLRCKPISGHDYLFWYRQTMMRGLELLIYFNNNVPIDDSGMPEDR 120
           IQSPRHEVTEMGQEVTLRCKPISGHDYLFWYRQTMMRGLELLIYFNNNVPIDDSGMPEDR
Sbjct: 61  IQSPRHEVTEMGQEVTLRCKPISGHDYLFWYRQTMMRGLELLIYFNNNVPIDDSGMPEDR 120

Query: 121 FSAKMPNASFSTLKIQPSEPRDSAVYFCASSLATALQNHPFPVQKPWCFSFSFYLPAVLG 180
           FSAKMPNASFSTLKIQPSEPRDSAVYFCASSLATALQNHPFPVQKPWCFSFSFYLPAVLG
Sbjct: 121 FSAKMPNASFSTLKIQPSEPRDSAVYFCASSLATALQNHPFPVQKPWCFSFSFYLPAVLG 180

Query: 181 KVFPVPPSP 189
           KVFPVPPSP
Sbjct: 181 KVFPVPPSP 189


>gi|239754728 PREDICTED: similar to hCG1737376 [Homo sapiens]
          Length = 170

 Score =  209 bits (533), Expect = 9e-55
 Identities = 100/145 (68%), Positives = 115/145 (79%), Gaps = 1/145 (0%)

Query: 43  LCCVSLCILVAKHTDAGVIQSPRHEVTEMGQEVTLRCKPISGHDYLFWYRQTMMRGLELL 102
           LCCV LC+L  +  DA V Q+PRH+VTEMGQEVT+RC+PI GH+ +FWYRQTMM+GLELL
Sbjct: 6   LCCVVLCLLGEELIDARVTQTPRHKVTEMGQEVTMRCQPILGHNTVFWYRQTMMQGLELL 65

Query: 103 IYFNNNVPIDDSGMPEDRFSAKMPNASFSTLKIQPSEPRDSAVYFCASSLATALQNHPFP 162
            YF N  P+DDSGMP+DRFSA+MP+A+ +TLKIQPSEPRDSAVYFCAS L TALQNH  P
Sbjct: 66  AYFRNRAPLDDSGMPKDRFSAEMPDATLATLKIQPSEPRDSAVYFCASGLVTALQNHLLP 125

Query: 163 VQKPWCFSFSFYLPAVLGKVFPVPP 187
           VQKPWCF FS      L   F  PP
Sbjct: 126 VQKPWCFLFSSSTQQ-LSAAFLAPP 149


>gi|239749275 PREDICTED: hypothetical protein XP_002346976 [Homo
           sapiens]
          Length = 245

 Score =  144 bits (362), Expect = 6e-35
 Identities = 73/134 (54%), Positives = 89/134 (66%)

Query: 33  CSHSAMDSWTLCCVSLCILVAKHTDAGVIQSPRHEVTEMGQEVTLRCKPISGHDYLFWYR 92
           C   AM +  L  V+ C+L A HT AGV QSP ++VTE G++V LRC PISGH  L+WYR
Sbjct: 76  CPDPAMGTRLLFWVAFCLLGADHTGAGVSQSPSNKVTEKGKDVELRCDPISGHTALYWYR 135

Query: 93  QTMMRGLELLIYFNNNVPIDDSGMPEDRFSAKMPNASFSTLKIQPSEPRDSAVYFCASSL 152
           Q++ +GLE LIYF  N   D SG+P DRFSA+    S STL IQ ++  DSAVY CASSL
Sbjct: 136 QSLGQGLEFLIYFQGNSAPDKSGLPSDRFSAERTGGSVSTLTIQRTQQEDSAVYLCASSL 195

Query: 153 ATALQNHPFPVQKP 166
           ATA  +   P  KP
Sbjct: 196 ATAWHSRLLPAHKP 209


>gi|239754736 PREDICTED: similar to hCG2039503 [Homo sapiens]
          Length = 135

 Score =  138 bits (347), Expect = 3e-33
 Identities = 69/129 (53%), Positives = 88/129 (68%), Gaps = 1/129 (0%)

Query: 38  MDSWTLCCVSLCILVAKHTDAGVIQSPRHEVTEMGQEVTLRCKPISGHDYLFWYRQTMMR 97
           MD W LC V+LC+L A H++ GV Q+PRH+VT MGQEV LRC P SGH ++ WYRQ + +
Sbjct: 1   MDIWLLCWVTLCLLAAGHSEPGVSQTPRHKVTNMGQEVILRCDPSSGHMFVHWYRQNLRQ 60

Query: 98  GLELLIYFNNNVPIDDSGMPEDRFSAKMPNASFSTLKIQPSEPRDSAVYFCASSLATALQ 157
            ++LLI F       DSGMP++RF+A+ PN + STLKI P+EPRDSAVY  +S     L 
Sbjct: 61  EMKLLISFQYQNIAVDSGMPKERFTAERPNGTSSTLKIHPAEPRDSAVYLYSSGGTAWLS 120

Query: 158 NHPFPVQKP 166
             P P  KP
Sbjct: 121 QFP-PGCKP 128


>gi|239754738 PREDICTED: similar to hCG2039504 [Homo sapiens]
          Length = 182

 Score =  133 bits (334), Expect = 1e-31
 Identities = 65/139 (46%), Positives = 88/139 (63%), Gaps = 5/139 (3%)

Query: 34  SHSAMDSWTLCCVSLCILVAKHTDAGVIQSPRHEVTEMGQEVTLRCKPISGHDYLFWYRQ 93
           ++SAMD+  LCC  +C+L A  ++AGV+Q+PRH V   GQE  LRC P+ GH +++WYRQ
Sbjct: 30  ANSAMDTRVLCCAVICLLGAGLSNAGVMQNPRHLVRRRGQEARLRCSPMKGHSHVYWYRQ 89

Query: 94  TMMRGLELLIYFNNNVPIDDSGMPEDRFSAKMPNASFSTLKIQPSEPRDSAVYFCASSLA 153
               GL+ ++Y      ID+SGMP++RFSA+ P    S L+IQ     DSA YFCASS  
Sbjct: 90  LPEEGLKFMVYLQKENIIDESGMPKERFSAEFPKEGPSILRIQQVVRGDSAAYFCASSPP 149

Query: 154 TALQNHPFPVQK-----PW 167
           T +Q+H   V K     PW
Sbjct: 150 TLMQSHILSVHKHPPDLPW 168


>gi|239754724 PREDICTED: similar to hCG1737365 [Homo sapiens]
          Length = 147

 Score =  125 bits (315), Expect = 2e-29
 Identities = 63/122 (51%), Positives = 82/122 (67%)

Query: 33  CSHSAMDSWTLCCVSLCILVAKHTDAGVIQSPRHEVTEMGQEVTLRCKPISGHDYLFWYR 92
           C   AM +  LC V+ C+LV +  +AGV+QSPR+++ E  Q V   C PISGH+ L+WY 
Sbjct: 25  CPDPAMGTRLLCWVAFCLLVEELIEAGVVQSPRYKIIEKKQPVAFWCNPISGHNTLYWYL 84

Query: 93  QTMMRGLELLIYFNNNVPIDDSGMPEDRFSAKMPNASFSTLKIQPSEPRDSAVYFCASSL 152
           Q + +G ELLI + N   +DDS +P+DRFSA+      STLKIQP+E  DSAVY CASSL
Sbjct: 85  QNLGQGPELLIRYENEEAVDDSQLPKDRFSAERLKGVDSTLKIQPAELGDSAVYLCASSL 144

Query: 153 AT 154
            T
Sbjct: 145 DT 146


>gi|239754730 PREDICTED: similar to hCG1737378 [Homo sapiens]
          Length = 179

 Score =  124 bits (311), Expect = 5e-29
 Identities = 59/122 (48%), Positives = 78/122 (63%)

Query: 43  LCCVSLCILVAKHTDAGVIQSPRHEVTEMGQEVTLRCKPISGHDYLFWYRQTMMRGLELL 102
           + C+    L  +H +AGV Q P H V E GQ VTLRC PISGHD L+WYR+ M + ++ L
Sbjct: 1   MSCILFLSLPTEHIEAGVTQFPSHSVIEKGQTVTLRCDPISGHDNLYWYRRVMGKEIKFL 60

Query: 103 IYFNNNVPIDDSGMPEDRFSAKMPNASFSTLKIQPSEPRDSAVYFCASSLATALQNHPFP 162
           ++F      D+SGMP +RF A+    ++STLK+QP+E  DS VYFCASS  T L +    
Sbjct: 61  LHFVKESKQDESGMPNNRFLAERTGGTYSTLKVQPAELEDSGVYFCASSQDTVLHSRALA 120

Query: 163 VQ 164
           VQ
Sbjct: 121 VQ 122


>gi|239749277 PREDICTED: hypothetical protein XP_002346977 [Homo
           sapiens]
          Length = 118

 Score =  122 bits (305), Expect = 2e-28
 Identities = 61/117 (52%), Positives = 80/117 (68%)

Query: 38  MDSWTLCCVSLCILVAKHTDAGVIQSPRHEVTEMGQEVTLRCKPISGHDYLFWYRQTMMR 97
           M +  LC V+ C+LV +  +AGV+QSPR+++ E  Q V   C PISGH+ L+WY Q + +
Sbjct: 1   MGTRLLCWVAFCLLVEELIEAGVVQSPRYKIIEKKQPVAFWCNPISGHNTLYWYLQNLGQ 60

Query: 98  GLELLIYFNNNVPIDDSGMPEDRFSAKMPNASFSTLKIQPSEPRDSAVYFCASSLAT 154
           G ELLI + N   +DDS +P+DRFSA+      STLKIQP+E  DSAVY CASSL T
Sbjct: 61  GPELLIRYENEEAVDDSQLPKDRFSAERLKGVDSTLKIQPAELGDSAVYLCASSLDT 117


>gi|239754734 PREDICTED: similar to hCG2002964 [Homo sapiens]
          Length = 122

 Score =  104 bits (259), Expect = 5e-23
 Identities = 54/114 (47%), Positives = 72/114 (63%), Gaps = 2/114 (1%)

Query: 44  CCVSLCILVAKHTDAGVIQSPRHEVTEMGQEVTLRCKPISGHDYLFWYRQTMMRGLELLI 103
           C   LC+L A      V Q+P+H V   GQ+  L C PI GH Y+FWY+Q +    + LI
Sbjct: 7   CITILCLLAAGSPGEEVAQTPKHLVRGEGQKAKLYCAPIKGHSYVFWYQQVLKNEFKFLI 66

Query: 104 YFNNNVPIDDSGMPEDRFSAK-MPNASFSTLKIQPSEPRDSAVYFCASSLATAL 156
            F N    D++GMP++RFSAK +PN+  S L+IQ ++  DSAVYFCASS +T L
Sbjct: 67  SFQNENVFDETGMPKERFSAKCLPNSPCS-LEIQATKLEDSAVYFCASSQSTVL 119


>gi|239754732 PREDICTED: similar to hCG1737379 [Homo sapiens]
          Length = 167

 Score = 94.0 bits (232), Expect = 7e-20
 Identities = 51/142 (35%), Positives = 78/142 (54%), Gaps = 5/142 (3%)

Query: 46  VSLCILVAKHTDAGVIQSPRHEVTEMGQEVTLRCKPISGHDYLFWYRQTMMRGLELLIYF 105
           ++LC+L   H DA VIQ+PR++VT+ G+ VTL C     H+ ++WY+Q   +  +LL ++
Sbjct: 9   MALCLLGTGHGDAMVIQNPRYQVTQFGKPVTLSCSQTLNHNVMYWYQQKSSQAPKLLFHY 68

Query: 106 NNNVPIDDSGMPEDRFSAKMPNASFSTLKIQPSEPRDSAVYFCASSLATALQNHPFPVQK 165
            +    +++  P D F ++ PN SF  L I+     D+A+Y CA+S  T LQ     V K
Sbjct: 69  YDKDFNNEADTP-DNFQSRRPNTSFCFLDIRSPGLGDAAMYLCATSRDTELQCFLLSVHK 127

Query: 166 PWCFSFSFYLPAVLGKVFPVPP 187
           P CF      P    +  P PP
Sbjct: 128 PHCFPD----PGAFSRTSPSPP 145


>gi|239749279 PREDICTED: hypothetical protein XP_002346978 [Homo
           sapiens]
          Length = 167

 Score = 94.0 bits (232), Expect = 7e-20
 Identities = 51/142 (35%), Positives = 78/142 (54%), Gaps = 5/142 (3%)

Query: 46  VSLCILVAKHTDAGVIQSPRHEVTEMGQEVTLRCKPISGHDYLFWYRQTMMRGLELLIYF 105
           ++LC+L   H DA VIQ+PR++VT+ G+ VTL C     H+ ++WY+Q   +  +LL ++
Sbjct: 9   MALCLLGTGHGDAMVIQNPRYQVTQFGKPVTLSCSQTLNHNVMYWYQQKSSQAPKLLFHY 68

Query: 106 NNNVPIDDSGMPEDRFSAKMPNASFSTLKIQPSEPRDSAVYFCASSLATALQNHPFPVQK 165
            +    +++  P D F ++ PN SF  L I+     D+A+Y CA+S  T LQ     V K
Sbjct: 69  YDKDFNNEADTP-DNFQSRRPNTSFCFLDIRSPGLGDAAMYLCATSRDTELQCFLLSVHK 127

Query: 166 PWCFSFSFYLPAVLGKVFPVPP 187
           P CF      P    +  P PP
Sbjct: 128 PHCFPD----PGAFSRTSPSPP 145


>gi|239749273 PREDICTED: similar to hCG2039484 [Homo sapiens]
          Length = 235

 Score = 77.4 bits (189), Expect = 7e-15
 Identities = 43/129 (33%), Positives = 66/129 (51%), Gaps = 1/129 (0%)

Query: 37  AMDSWTLCCVSLCILVAKHTDAGVIQSPRHEVTEMGQEVTLRCKPISGHDYLFWYRQTMM 96
           AM    LCC +  +L A   +AGV Q+P+  V + GQ +TL C     H+Y++WYRQ   
Sbjct: 14  AMSLGLLCCGAFSLLWAGPVNAGVTQTPKFRVLKTGQSMTLLCAQDMNHEYMYWYRQDPG 73

Query: 97  RGLELLIYFNNNVPIDDSGMPEDRFSAKMPNASFSTLKIQPSEPRDSAVYFCASSLATAL 156
            GL L+ Y           +P+    +++   +F  L ++ + P  ++VYFCASS +T L
Sbjct: 74  MGLRLIHYSVGEGTTAKGEVPDGYNVSRLKKQNF-LLGLESAAPSQTSVYFCASSYSTVL 132

Query: 157 QNHPFPVQK 165
                  QK
Sbjct: 133 HGCLLSAQK 141


>gi|239754742 PREDICTED: similar to hCG2002958 [Homo sapiens]
          Length = 132

 Score = 72.4 bits (176), Expect = 2e-13
 Identities = 38/114 (33%), Positives = 62/114 (54%), Gaps = 1/114 (0%)

Query: 38  MDSWTLCCVSLCILVAKHTDAGVIQSPRHEVTEMGQEVTLRCKPISGHDYLFWYRQTMMR 97
           M S    C +  +L     DA V Q+PR+ +T+ G+ + L C    GHD ++WYRQ    
Sbjct: 1   MASLLFFCGAFYLLGTGSMDADVTQTPRNRITKTGKRIMLECSQTKGHDRMYWYRQDPGL 60

Query: 98  GLELLIYFNNNVPIDDSGMPEDRFSAKMPNASFSTLKIQPSEPRDSAVYFCASS 151
           GL+ LIY++ +V   + G   D +S      +  +L ++ + P  +A+YFCA+S
Sbjct: 61  GLQ-LIYYSFDVKDINKGEISDGYSVSRQAQAKFSLSLESAIPNQTALYFCATS 113


>gi|239754744 PREDICTED: similar to hCG2043257 [Homo sapiens]
          Length = 132

 Score = 62.8 bits (151), Expect = 2e-10
 Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 3/124 (2%)

Query: 43  LCCVSLCILVAKHTDAGVIQSPRHEVTEMGQEVTLRCKPISGHDYLFWYRQTMMRGLEL- 101
           LC +    L A   +A + Q+PR+ V   G+++TL C    GHD ++WY+Q    G+EL 
Sbjct: 6   LCYMGFYFLGAGLMEADIYQTPRYLVIGTGKKITLECSQTMGHDKMYWYQQD--PGMELH 63

Query: 102 LIYFNNNVPIDDSGMPEDRFSAKMPNASFSTLKIQPSEPRDSAVYFCASSLATALQNHPF 161
           LI+++  V   + G      +          L ++ + P  ++ Y CASS  T L  +  
Sbjct: 64  LIHYSYGVNSTEKGDLSSESTVSRIRTEHFPLTLESARPSHTSQYLCASSEYTVLHGYRH 123

Query: 162 PVQK 165
             QK
Sbjct: 124 SAQK 127


>gi|169218204 PREDICTED: similar to pre-B lymphocyte gene 1 [Homo
           sapiens]
          Length = 123

 Score = 49.3 bits (116), Expect = 2e-06
 Identities = 33/93 (35%), Positives = 45/93 (48%), Gaps = 6/93 (6%)

Query: 57  DAGVIQSPRHEVTEMGQEVTLRCKPISG-HDYLFWYRQTMMRGLELLIYFNNNVPIDDSG 115
           D  + QSP      +G  VT+ C+   G   YL WY+Q   +  +LLIY  + +    SG
Sbjct: 23  DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTL---QSG 79

Query: 116 MPEDRFSAKMPNASFSTLKIQPSEPRDSAVYFC 148
           +P  RFS       F TL I   +P D A Y+C
Sbjct: 80  VP-SRFSGSGSGTEF-TLTISSLQPEDFATYYC 110


>gi|169163724 PREDICTED: similar to hCG26659 [Homo sapiens]
          Length = 191

 Score = 47.4 bits (111), Expect = 7e-06
 Identities = 34/99 (34%), Positives = 46/99 (46%), Gaps = 6/99 (6%)

Query: 57  DAGVIQSPRHEVTEMGQEVTLRCKPISG-HDYLFWYRQTMMRGLELLIYFNNNVPIDDSG 115
           D  V QSP      +G  VT+ C+   G  + L WY+Q   +   LLIY  +++    SG
Sbjct: 23  DIQVTQSPSSLSASVGDRVTITCRASQGISNGLSWYQQKPGQAPTLLIYAASSL---QSG 79

Query: 116 MPEDRFSAKMPNASFSTLKIQPSEPRDSAVYFCASSLAT 154
           +P  RFS       F TL I   +P D A Y+C     T
Sbjct: 80  VPS-RFSGSGSGTDF-TLTISSLQPEDVATYYCLQDYTT 116


>gi|239747852 PREDICTED: hypothetical protein XP_002346449 [Homo
           sapiens]
          Length = 155

 Score = 47.4 bits (111), Expect = 7e-06
 Identities = 34/99 (34%), Positives = 46/99 (46%), Gaps = 6/99 (6%)

Query: 57  DAGVIQSPRHEVTEMGQEVTLRCKPISG-HDYLFWYRQTMMRGLELLIYFNNNVPIDDSG 115
           D  V QSP      +G  VT+ C+   G  + L WY+Q   +   LLIY  +++    SG
Sbjct: 23  DIQVTQSPSSLSASVGDRVTITCRASQGISNGLSWYQQKPGQAPTLLIYAASSL---QSG 79

Query: 116 MPEDRFSAKMPNASFSTLKIQPSEPRDSAVYFCASSLAT 154
           +P  RFS       F TL I   +P D A Y+C     T
Sbjct: 80  VPS-RFSGSGSGTDF-TLTISSLQPEDVATYYCLQDYTT 116


>gi|169163023 PREDICTED: similar to hCG26659 [Homo sapiens]
          Length = 191

 Score = 47.4 bits (111), Expect = 7e-06
 Identities = 34/99 (34%), Positives = 46/99 (46%), Gaps = 6/99 (6%)

Query: 57  DAGVIQSPRHEVTEMGQEVTLRCKPISG-HDYLFWYRQTMMRGLELLIYFNNNVPIDDSG 115
           D  V QSP      +G  VT+ C+   G  + L WY+Q   +   LLIY  +++    SG
Sbjct: 23  DIQVTQSPSSLSASVGDRVTITCRASQGISNGLSWYQQKPGQAPTLLIYAASSL---QSG 79

Query: 116 MPEDRFSAKMPNASFSTLKIQPSEPRDSAVYFCASSLAT 154
           +P  RFS       F TL I   +P D A Y+C     T
Sbjct: 80  VPS-RFSGSGSGTDF-TLTISSLQPEDVATYYCLQDYTT 116


>gi|239741653 PREDICTED: hypothetical protein XP_002342271 [Homo
           sapiens]
          Length = 636

 Score = 47.4 bits (111), Expect = 7e-06
 Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 6/99 (6%)

Query: 57  DAGVIQSPRHEVTEMGQEVTLRCKPISG-HDYLFWYRQTMMRGLELLIYFNNNVPIDDSG 115
           D  + QSP      +G  VT+ C+   G  + L WY+Q   +  +LLIY  +++    SG
Sbjct: 534 DIQMTQSPSSLSASVGDRVTITCRASQGISNNLNWYQQKPGKTPKLLIYAASSL---QSG 590

Query: 116 MPEDRFSAKMPNASFSTLKIQPSEPRDSAVYFCASSLAT 154
           +P  RFS     A + TL I+  +P D A Y+C  S +T
Sbjct: 591 IPS-RFSDSGSGADY-TLTIRSLQPEDFATYYCQQSDST 627


>gi|239754740 PREDICTED: similar to hCG2039506 [Homo sapiens]
          Length = 170

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 3/111 (2%)

Query: 58  AGVIQSPRHEVTEMGQEVTLRCKPISGH-DYLFWYRQTMMRGLELLIYFNNNVPID-DSG 115
           A V Q P   + + G  V + C+ +      +FWYRQ   + L L+   N       + G
Sbjct: 35  AVVSQHPSWVICKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQG 94

Query: 116 MPEDRFSAKMPNASFSTLKIQPSEPRDSAVYFCASSLATALQNHPFPVQKP 166
           + +D+F     + + STL +  + P DS+ Y C S+  TA      P Q+P
Sbjct: 95  VEKDKFLINHASLTLSTLTVTSAHPEDSSFYIC-SARDTAPGGDQTPRQEP 144


>gi|239752152 PREDICTED: hypothetical protein XP_002348153 [Homo
           sapiens]
          Length = 264

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 40/118 (33%), Positives = 55/118 (46%), Gaps = 9/118 (7%)

Query: 36  SAMDSWTLCCVSLCILVAKHTDAGVIQSPRHEVTEMGQEVTLRCKPIS---GHDYLFWYR 92
           S+M S+ L    L         + + Q P    T  GQ VT+ C   S   G + + WY+
Sbjct: 25  SSMASFPLLLTLLTHCAGSWAQSVLTQPPSASGTP-GQRVTISCSGSSSNIGSNTVNWYQ 83

Query: 93  QTMMRGLELLIYFNNNVPIDDSGMPEDRFSAKMPNASFSTLKIQPSEPRDSAVYFCAS 150
           Q      +LLIY NN  P   SG+P DRFS      S ++L I   +  D A Y+CA+
Sbjct: 84  QLPGTAPKLLIYSNNQRP---SGVP-DRFSGSKSGTS-ASLAISGLQSEDEADYYCAA 136


>gi|169163335 PREDICTED: similar to hCG1742442 [Homo sapiens]
          Length = 295

 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 6/99 (6%)

Query: 57  DAGVIQSPRHEVTEMGQEVTLRCKPISG-HDYLFWYRQTMMRGLELLIYFNNNVPIDDSG 115
           D  + QSP      +G  VT+ C+   G  + L WY+Q   +  +LLIY  +++    SG
Sbjct: 193 DIQMTQSPSSLSASVGGRVTITCRASQGISNNLNWYQQKPGKTPKLLIYAASSL---QSG 249

Query: 116 MPEDRFSAKMPNASFSTLKIQPSEPRDSAVYFCASSLAT 154
           +P  RFS     A + TL I   +P D A Y+C  S +T
Sbjct: 250 IPS-RFSDSGSGADY-TLTISSLQPEDFAAYYCQQSDST 286


>gi|239755286 PREDICTED: similar to hCG1742442 [Homo sapiens]
          Length = 296

 Score = 45.8 bits (107), Expect = 2e-05
 Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 6/100 (6%)

Query: 57  DAGVIQSPRHEVTEMGQEVTLRCKPISG-HDYLFWYRQTMMRGLELLIYFNNNVPIDDSG 115
           D  + QSP      +G  VT+ C+   G  + L WY+Q   +  +LLIY  +++    SG
Sbjct: 194 DIQMTQSPSSLSASVGDRVTITCRASQGISNNLNWYQQKPGKTPKLLIYAASSL---QSG 250

Query: 116 MPEDRFSAKMPNASFSTLKIQPSEPRDSAVYFCASSLATA 155
           +P  RFS       + TL I   +P D A Y+C  S +T+
Sbjct: 251 IPS-RFSDSGSGTDY-TLTISSLQPEDFATYYCQQSDSTS 288


>gi|169194776 PREDICTED: similar to hCG1742442 [Homo sapiens]
          Length = 242

 Score = 45.8 bits (107), Expect = 2e-05
 Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 6/100 (6%)

Query: 57  DAGVIQSPRHEVTEMGQEVTLRCKPISG-HDYLFWYRQTMMRGLELLIYFNNNVPIDDSG 115
           D  + QSP      +G  VT+ C+   G  + L WY+Q   +  +LLIY  +++    SG
Sbjct: 140 DIQMTQSPSSLSASVGDRVTITCRASQGISNNLNWYQQKPGKTPKLLIYAASSL---QSG 196

Query: 116 MPEDRFSAKMPNASFSTLKIQPSEPRDSAVYFCASSLATA 155
           +P  RFS       + TL I   +P D A Y+C  S +T+
Sbjct: 197 IPS-RFSDSGSGTDY-TLTISSLQPEDFATYYCQQSDSTS 234


>gi|169167318 PREDICTED: similar to hCG2042707 [Homo sapiens]
          Length = 142

 Score = 45.8 bits (107), Expect = 2e-05
 Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 6/99 (6%)

Query: 57  DAGVIQSPRHEVTEMGQEVTLRCKPISG-HDYLFWYRQTMMRGLELLIYFNNNVPIDDSG 115
           D  + QSP      +G  VT+ C+   G  + L WY+Q   +  +LL+Y  + +   +SG
Sbjct: 32  DIQMTQSPSSLSASVGDRVTITCRASQGISNSLAWYQQKPGKAPKLLLYAASRL---ESG 88

Query: 116 MPEDRFSAKMPNASFSTLKIQPSEPRDSAVYFCASSLAT 154
           +P  RFS       + TL I   +P D A Y+C    +T
Sbjct: 89  VPS-RFSGSGSGTDY-TLTISSLQPEDFATYYCQQYYST 125


>gi|169190399 PREDICTED: similar to hCG1742442 [Homo sapiens]
          Length = 242

 Score = 45.8 bits (107), Expect = 2e-05
 Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 6/100 (6%)

Query: 57  DAGVIQSPRHEVTEMGQEVTLRCKPISG-HDYLFWYRQTMMRGLELLIYFNNNVPIDDSG 115
           D  + QSP      +G  VT+ C+   G  + L WY+Q   +  +LLIY  +++    SG
Sbjct: 140 DIQMTQSPSSLSASVGDRVTITCRASQGISNNLNWYQQKPGKTPKLLIYAASSL---QSG 196

Query: 116 MPEDRFSAKMPNASFSTLKIQPSEPRDSAVYFCASSLATA 155
           +P  RFS       + TL I   +P D A Y+C  S +T+
Sbjct: 197 IPS-RFSDSGSGTDY-TLTISSLQPEDFATYYCQQSDSTS 234


>gi|169174843 PREDICTED: similar to hCG1742442 [Homo sapiens]
          Length = 276

 Score = 44.7 bits (104), Expect = 5e-05
 Identities = 32/96 (33%), Positives = 47/96 (48%), Gaps = 6/96 (6%)

Query: 57  DAGVIQSPRHEVTEMGQEVTLRCKPISG-HDYLFWYRQTMMRGLELLIYFNNNVPIDDSG 115
           D  + QSP      +G  VT+ C+   G  + L WY+Q   +  +LLIY  +++    SG
Sbjct: 174 DIQMTQSPSSLSASVGGRVTITCRASQGISNNLNWYQQKPRKTPKLLIYAASSL---QSG 230

Query: 116 MPEDRFSAKMPNASFSTLKIQPSEPRDSAVYFCASS 151
           +P  RFS       + TL I   +P D A Y+C  S
Sbjct: 231 IPS-RFSDSGSGTDY-TLTISSLQPEDFATYYCQQS 264


>gi|239743839 PREDICTED: hypothetical protein XP_002342967 [Homo
           sapiens]
          Length = 761

 Score = 44.7 bits (104), Expect = 5e-05
 Identities = 32/96 (33%), Positives = 47/96 (48%), Gaps = 6/96 (6%)

Query: 57  DAGVIQSPRHEVTEMGQEVTLRCKPISG-HDYLFWYRQTMMRGLELLIYFNNNVPIDDSG 115
           D  + QSP      +G  VT+ C+   G  + L WY+Q   +  +LLIY  +++    SG
Sbjct: 659 DIQMTQSPSSLSASVGGRVTITCRASQGISNNLNWYQQKPRKTPKLLIYAASSL---QSG 715

Query: 116 MPEDRFSAKMPNASFSTLKIQPSEPRDSAVYFCASS 151
           +P  RFS       + TL I   +P D A Y+C  S
Sbjct: 716 IPS-RFSDSGSGTDY-TLTISSLQPEDFATYYCQQS 749


>gi|239753212 PREDICTED: similar to hCG1686089 [Homo sapiens]
          Length = 152

 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 40/119 (33%), Positives = 50/119 (42%), Gaps = 10/119 (8%)

Query: 62  QSPRHEVTEMGQEVTLRCKPISG--HDYLFWYRQTMMRGLELLIYFNNNVPIDDSGMPED 119
           QSP       G+  TL C         YL WY+Q       LLIY   +     +G+P D
Sbjct: 26  QSPATLSLSPGERATLSCGASQSVSSSYLAWYQQKPGLAPRLLIY---DASSRATGIP-D 81

Query: 120 RFSAKMPNASFSTLKIQPSEPRDSAVYFC---ASSLATALQNHPFPVQKPWCFSFSFYL 175
           RFS       F TL I   EP D AVY+C    SS  T +Q       +P  F+  + L
Sbjct: 82  RFSGSGSGTDF-TLTISRLEPEDFAVYYCQQYGSSPPTVIQLETKTSARPSLFTRLYQL 139


>gi|239749464 PREDICTED: hypothetical protein XP_002347049 [Homo
           sapiens]
          Length = 152

 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 40/119 (33%), Positives = 50/119 (42%), Gaps = 10/119 (8%)

Query: 62  QSPRHEVTEMGQEVTLRCKPISG--HDYLFWYRQTMMRGLELLIYFNNNVPIDDSGMPED 119
           QSP       G+  TL C         YL WY+Q       LLIY   +     +G+P D
Sbjct: 26  QSPATLSLSPGERATLSCGASQSVSSSYLAWYQQKPGLAPRLLIY---DASSRATGIP-D 81

Query: 120 RFSAKMPNASFSTLKIQPSEPRDSAVYFC---ASSLATALQNHPFPVQKPWCFSFSFYL 175
           RFS       F TL I   EP D AVY+C    SS  T +Q       +P  F+  + L
Sbjct: 82  RFSGSGSGTDF-TLTISRLEPEDFAVYYCQQYGSSPPTVIQLETKTSARPSLFTRLYQL 139


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.324    0.135    0.448 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,001,092
Number of Sequences: 37866
Number of extensions: 359458
Number of successful extensions: 1145
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 61
Number of HSP's that attempted gapping in prelim test: 1091
Number of HSP's gapped (non-prelim): 82
length of query: 189
length of database: 18,247,518
effective HSP length: 96
effective length of query: 93
effective length of database: 14,612,382
effective search space: 1358951526
effective search space used: 1358951526
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 59 (27.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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