Search of human proteins with 239754450

Search of human proteins with 239754450

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239754450 PREDICTED: hypothetical protein [Homo sapiens]
         (186 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239754450 PREDICTED: hypothetical protein [Homo sapiens]           397   e-111
gi|239748999 PREDICTED: hypothetical protein [Homo sapiens]           397   e-111
gi|239753180 PREDICTED: hypothetical protein [Homo sapiens]            38   0.006
gi|239747754 PREDICTED: hypothetical protein XP_002348260 [Homo ...    38   0.006
gi|239741620 PREDICTED: hypothetical protein XP_002342250 [Homo ...    38   0.006
gi|11386197 forkhead box E3 [Homo sapiens]                             34   0.064
gi|20162554 Kruppel-like factor 14 [Homo sapiens]                      34   0.083
gi|5453844 TAF6-like RNA polymerase II [Homo sapiens]                  33   0.11 
gi|145199237 transcription elongation factor B polypeptide 3 bin...    33   0.11 
gi|169161029 PREDICTED: hypothetical protein [Homo sapiens]            33   0.18 
gi|74271888 lipin 3 [Homo sapiens]                                     33   0.18 
gi|46195763 metastasis suppressor 1-like [Homo sapiens]                32   0.24 
gi|48762934 alpha 2 type I collagen [Homo sapiens]                     32   0.32 
gi|239757493 PREDICTED: hypothetical protein [Homo sapiens]            32   0.32 
gi|239752010 PREDICTED: hypothetical protein XP_002348066 [Homo ...    32   0.32 
gi|239746495 PREDICTED: hypothetical protein XP_002343746 [Homo ...    32   0.32 
gi|126090892 aggrecan isoform 2 precursor [Homo sapiens]               32   0.41 
gi|126090883 aggrecan isoform 1 precursor [Homo sapiens]               32   0.41 
gi|6912458 calcineurin binding protein 1 [Homo sapiens]                32   0.41 
gi|29826294 golgi reassembly stacking protein 2 [Homo sapiens]         31   0.70 
gi|217416343 fibrosin-like 1 [Homo sapiens]                            31   0.70 
gi|110227615 echinoderm microtubule associated protein like 3 [H...    31   0.70 
gi|94400919 WD repeat domain 90 [Homo sapiens]                         31   0.70 
gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]            30   0.92 
gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]            30   0.92 
gi|4505123 myelin basic protein isoform 2 [Homo sapiens]               30   0.92 
gi|189217876 sal-like 1 isoform b [Homo sapiens]                       30   0.92 
gi|118442837 sal-like 1 isoform a [Homo sapiens]                       30   0.92 
gi|148747864 JAW1-related protein isoform a [Homo sapiens]             30   0.92 
gi|34013590 Rho GTPase activating protein 2 [Homo sapiens]             30   0.92 

>gi|239754450 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 186

 Score =  397 bits (1021), Expect = e-111
 Identities = 186/186 (100%), Positives = 186/186 (100%)

Query: 1   MPAHHDPQILDGDSGEEAETTTPQCGTEPPSSGLKISAIPAASRSGPGASPTVNTDPGLL 60
           MPAHHDPQILDGDSGEEAETTTPQCGTEPPSSGLKISAIPAASRSGPGASPTVNTDPGLL
Sbjct: 1   MPAHHDPQILDGDSGEEAETTTPQCGTEPPSSGLKISAIPAASRSGPGASPTVNTDPGLL 60

Query: 61  PKWGREQAASRETGWKGLSPTTASLPLLRGRPCFLLRGCSTPRRALHELPSRKHLRVPQF 120
           PKWGREQAASRETGWKGLSPTTASLPLLRGRPCFLLRGCSTPRRALHELPSRKHLRVPQF
Sbjct: 61  PKWGREQAASRETGWKGLSPTTASLPLLRGRPCFLLRGCSTPRRALHELPSRKHLRVPQF 120

Query: 121 TPCSLLKPFLPVSPQGAHGVSSASAPGGGLSSSGACPRGYQGVRHQKQPNPRCLCCHYWF 180
           TPCSLLKPFLPVSPQGAHGVSSASAPGGGLSSSGACPRGYQGVRHQKQPNPRCLCCHYWF
Sbjct: 121 TPCSLLKPFLPVSPQGAHGVSSASAPGGGLSSSGACPRGYQGVRHQKQPNPRCLCCHYWF 180

Query: 181 RRLVLG 186
           RRLVLG
Sbjct: 181 RRLVLG 186


>gi|239748999 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 186

 Score =  397 bits (1021), Expect = e-111
 Identities = 186/186 (100%), Positives = 186/186 (100%)

Query: 1   MPAHHDPQILDGDSGEEAETTTPQCGTEPPSSGLKISAIPAASRSGPGASPTVNTDPGLL 60
           MPAHHDPQILDGDSGEEAETTTPQCGTEPPSSGLKISAIPAASRSGPGASPTVNTDPGLL
Sbjct: 1   MPAHHDPQILDGDSGEEAETTTPQCGTEPPSSGLKISAIPAASRSGPGASPTVNTDPGLL 60

Query: 61  PKWGREQAASRETGWKGLSPTTASLPLLRGRPCFLLRGCSTPRRALHELPSRKHLRVPQF 120
           PKWGREQAASRETGWKGLSPTTASLPLLRGRPCFLLRGCSTPRRALHELPSRKHLRVPQF
Sbjct: 61  PKWGREQAASRETGWKGLSPTTASLPLLRGRPCFLLRGCSTPRRALHELPSRKHLRVPQF 120

Query: 121 TPCSLLKPFLPVSPQGAHGVSSASAPGGGLSSSGACPRGYQGVRHQKQPNPRCLCCHYWF 180
           TPCSLLKPFLPVSPQGAHGVSSASAPGGGLSSSGACPRGYQGVRHQKQPNPRCLCCHYWF
Sbjct: 121 TPCSLLKPFLPVSPQGAHGVSSASAPGGGLSSSGACPRGYQGVRHQKQPNPRCLCCHYWF 180

Query: 181 RRLVLG 186
           RRLVLG
Sbjct: 181 RRLVLG 186


>gi|239753180 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 130

 Score = 37.7 bits (86), Expect = 0.006
 Identities = 37/108 (34%), Positives = 46/108 (42%), Gaps = 10/108 (9%)

Query: 40  PAASRSG---PGASPTVNTDPGLLPKWG-REQAASRETGWKGLSPTTASLPL-LRGRPCF 94
           P + RSG   PG SP     PG LP W   +   S  T +   SP   SLP+  R R   
Sbjct: 28  PCSQRSGRPTPGRSP-----PGRLPGWVCSDTHISPGTCFPASSPRERSLPVPSRPRQKH 82

Query: 95  LLRGCSTPRRALHELPSRKHLRVPQFTPCSLLKPFLPVSPQGAHGVSS 142
            L G  +        PS   L   +  PCS L P+LP +P  + G  S
Sbjct: 83  HLAGSRSLDMLSAGNPSSTPLPHRRPGPCSALPPYLPCAPPASPGALS 130


>gi|239747754 PREDICTED: hypothetical protein XP_002348260 [Homo
           sapiens]
          Length = 130

 Score = 37.7 bits (86), Expect = 0.006
 Identities = 37/108 (34%), Positives = 46/108 (42%), Gaps = 10/108 (9%)

Query: 40  PAASRSG---PGASPTVNTDPGLLPKWG-REQAASRETGWKGLSPTTASLPL-LRGRPCF 94
           P + RSG   PG SP     PG LP W   +   S  T +   SP   SLP+  R R   
Sbjct: 28  PCSQRSGRPTPGRSP-----PGRLPGWVCSDTHISPGTCFPASSPRERSLPVPSRPRQKH 82

Query: 95  LLRGCSTPRRALHELPSRKHLRVPQFTPCSLLKPFLPVSPQGAHGVSS 142
            L G  +        PS   L   +  PCS L P+LP +P  + G  S
Sbjct: 83  HLAGSRSLDMLSAGNPSSTPLPHRRPGPCSALPPYLPCAPPASPGALS 130


>gi|239741620 PREDICTED: hypothetical protein XP_002342250 [Homo
           sapiens]
          Length = 130

 Score = 37.7 bits (86), Expect = 0.006
 Identities = 37/108 (34%), Positives = 46/108 (42%), Gaps = 10/108 (9%)

Query: 40  PAASRSG---PGASPTVNTDPGLLPKWG-REQAASRETGWKGLSPTTASLPL-LRGRPCF 94
           P + RSG   PG SP     PG LP W   +   S  T +   SP   SLP+  R R   
Sbjct: 28  PCSQRSGRPTPGRSP-----PGRLPGWVCSDTHISPGTCFPASSPRERSLPVPSRPRQKH 82

Query: 95  LLRGCSTPRRALHELPSRKHLRVPQFTPCSLLKPFLPVSPQGAHGVSS 142
            L G  +        PS   L   +  PCS L P+LP +P  + G  S
Sbjct: 83  HLAGSRSLDMLSAGNPSSTPLPHRRPGPCSALPPYLPCAPPASPGALS 130


>gi|11386197 forkhead box E3 [Homo sapiens]
          Length = 319

 Score = 34.3 bits (77), Expect = 0.064
 Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 6/68 (8%)

Query: 28 EPPSSGLKISAIPAASRSGPGASPTVNTDPGLLPK---WGREQAASRETGWKGLSPTTAS 84
          +PP++     A+PA + SGP  SP    +PG  P+    GR +AA       G       
Sbjct: 8  DPPAAFSGFPALPAVAPSGPPPSPLAGAEPGREPEEAAAGRGEAAPTPAPGPG---RRRR 64

Query: 85 LPLLRGRP 92
           PL RG+P
Sbjct: 65 RPLQRGKP 72


>gi|20162554 Kruppel-like factor 14 [Homo sapiens]
          Length = 323

 Score = 33.9 bits (76), Expect = 0.083
 Identities = 43/188 (22%), Positives = 66/188 (35%), Gaps = 26/188 (13%)

Query: 6   DPQILDGDSGEEA-----ETTTPQCGTEPPSSGLKISAIPAASRSGPGASPTVNTDPGLL 60
           DP+   G +G E      E+  P  G   P+S  ++  +PA S    GA+P +       
Sbjct: 31  DPEGAGGAAGSEVGAAHPESALPGPGPSGPASVPQLPQVPAPSPGAGGAAPHLLA----A 86

Query: 61  PKWGREQAASRETGWK--GLSPTTAS-----LPLLRGRPCFLLRGCSTPRRALHELPSRK 113
             W   + +S E  W+  G +P  +S     +P     PC  L   S          S  
Sbjct: 87  SVWADLRGSSGEGSWENSGEAPRASSGFSDPIPCSVQTPCSELAPASGAAAVCAPESSSD 146

Query: 114 HLRVPQFTPCSLLKPFLPVSPQGAHGVSSASAPGGGLSSSGACPRGYQ---GVRHQKQPN 170
              VP         P  P +P  + G S  +   G   ++   PR        +  + P 
Sbjct: 147 APAVPS-------APAAPGAPAASGGFSGGALGAGPAPAADQAPRRRSVTPAAKRHQCPF 199

Query: 171 PRCLCCHY 178
           P C   +Y
Sbjct: 200 PGCTKAYY 207


>gi|5453844 TAF6-like RNA polymerase II [Homo sapiens]
          Length = 622

 Score = 33.5 bits (75), Expect = 0.11
 Identities = 18/56 (32%), Positives = 28/56 (50%)

Query: 116 RVPQFTPCSLLKPFLPVSPQGAHGVSSASAPGGGLSSSGACPRGYQGVRHQKQPNP 171
           ++PQ T  +++ P    SP+G+ G   ASA G   S S   PR ++     +Q  P
Sbjct: 484 KMPQLTASAIVSPHGDESPRGSGGGGPASASGPAASESRPLPRVHRARGAPRQQGP 539


>gi|145199237 transcription elongation factor B polypeptide 3
           binding protein 1 [Homo sapiens]
          Length = 1221

 Score = 33.5 bits (75), Expect = 0.11
 Identities = 46/166 (27%), Positives = 66/166 (39%), Gaps = 19/166 (11%)

Query: 17  EAETTTPQCGTEPPSSGLKISAIPAASRSGPGASPTVNTDPGLLPKWGREQAASRETGWK 76
           EA    P+     P+ G    A P A    PG+   ++ D G  P      AA  E G K
Sbjct: 123 EAPALAPRGPNASPTVGPDEDAFPLAFDYSPGSHGLLSPDAGYQP---TPLAAPAEPGSK 179

Query: 77  GLSPTTASLPLLRGRPC-------FLLRGCSTPRRALHELPSRKHLRVPQFTPCSLLKPF 129
               + ASL   +GR         ++ +  S PRR    +PS K++      P  L   +
Sbjct: 180 ---YSLASLDRGQGRGGGGGGALEYVPKAVSQPRRHSRPVPSGKYVVDNSRPPTDL--EY 234

Query: 130 LPVSPQGAHGVSSASAPGGGLSSSGACPRGYQGVRHQKQPNPRCLC 175
            P+S   A  +S AS+       +   PRG +G      P P+ LC
Sbjct: 235 DPLSNYSARHLSRASSRD---ERAAKRPRGSRG-SEPYTPAPKKLC 276


>gi|169161029 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 268

 Score = 32.7 bits (73), Expect = 0.18
 Identities = 42/141 (29%), Positives = 51/141 (36%), Gaps = 50/141 (35%)

Query: 22  TPQCGTEP-PSSGLKISAIPAASR-------SGPGASPTVNTDPGLLPKWGREQAASRET 73
           +P  G EP P +   + A PAA+R       S       +   P +LP   R   A   T
Sbjct: 126 SPGGGLEPSPGARGAVGAAPAAARHRKPRGRSRRAPQMPLRVLPPILPGLSRAGGA---T 182

Query: 74  GWKGLS----------------PTTASLPLLRGRPCFLLRGCSTPRR----------ALH 107
           G +GL                 P    +P LRGRP   L   +TPRR          ALH
Sbjct: 183 GGRGLPGRRGLPGRSGLQGAAVPPPVGVPSLRGRPWEALATAATPRRCPLQLLRAGPALH 242

Query: 108 -------------ELPSRKHL 115
                         LPSRKHL
Sbjct: 243 CPPSVGRGFVFIATLPSRKHL 263


>gi|74271888 lipin 3 [Homo sapiens]
          Length = 851

 Score = 32.7 bits (73), Expect = 0.18
 Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 22/124 (17%)

Query: 9   ILDGDSGEEAETTTPQCGTEPPSS---------GLKISAIPAASRSGPGAS-PTVNTDPG 58
           +L+G +G    T+ P+ G   PS+         GL I    A +   P    PT+   P 
Sbjct: 265 VLEGRAGA---TSPPRGGPSTPSTSVAGGVDPLGLPIQQTEAGADLQPDTEDPTLVGPPL 321

Query: 59  LLPKWGREQAASRETGWKGLSPTTAS-------LPLLRGRPCFLLRGCSTPRRALHELPS 111
             P+   E++ ++ +G  GL P + S       +P+  G+P  + RG  +P+R+ H  PS
Sbjct: 322 HTPE--TEESKTQSSGDMGLPPASKSWSWATLEVPVPTGQPERVSRGKGSPKRSQHLGPS 379

Query: 112 RKHL 115
             +L
Sbjct: 380 DIYL 383


>gi|46195763 metastasis suppressor 1-like [Homo sapiens]
          Length = 747

 Score = 32.3 bits (72), Expect = 0.24
 Identities = 35/130 (26%), Positives = 47/130 (36%), Gaps = 10/130 (7%)

Query: 10  LDGDSGEEAETTTPQCGTEP-PSSGLKISAIPA---ASRSGP---GASPTVNTDPGLLPK 62
           L   SG   +TTTP C  +  PS G           A   GP     S T+  +  +   
Sbjct: 467 LQYSSGYSTQTTTPSCSEDTIPSQGSDYDCYSVNGDADSEGPPEFDKSSTIPRNSNIAQN 526

Query: 63  WGREQAASRETGWKGLSPTTASLPLLRGRPCFLLRGCSTPRRALHELPSRKHLRVPQFTP 122
           + R     R     GL   TA LP   G P     G +T RR     P+ +   +    P
Sbjct: 527 YRRLIQTKRPASTAGL--PTAGLPTATGLPSGAPPGVATIRRTPSTKPTVRR-ALSSAGP 583

Query: 123 CSLLKPFLPV 132
             +  P +PV
Sbjct: 584 IPIRPPIVPV 593


>gi|48762934 alpha 2 type I collagen [Homo sapiens]
          Length = 1366

 Score = 32.0 bits (71), Expect = 0.32
 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 4/44 (9%)

Query: 128  PFLPVSPQGAHGVSSASAPGGGLSSSGAC----PRGYQGVRHQK 167
            P  PV P G HG    + P G +  +GA     P G QG+R  K
Sbjct: 965  PHGPVGPAGKHGNRGETGPSGPVGPAGAVGPRGPSGPQGIRGDK 1008


>gi|239757493 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 211

 Score = 32.0 bits (71), Expect = 0.32
 Identities = 36/125 (28%), Positives = 43/125 (34%), Gaps = 28/125 (22%)

Query: 48  GASPTVNTDPGLLPKWGRE-------QAASRETGWKGLSPTTASLPLLRGRPCFLLRGCS 100
           G+ P V   P  LP   R         AA+R +G   L P +A+   L G         +
Sbjct: 88  GSYPPVGGPPRHLPPGPRHLRIRSRLPAAARGSGAAPLPPCSAAYTRLSGTGAREGLRIA 147

Query: 101 TPRRALHELPSRKHLRVPQFTPCSLL-------------------KPFLPVSPQGAHGVS 141
           TP R L   PSR     P F  C L                    KP L  +P    GV 
Sbjct: 148 TPVRVLD--PSRSRCHGPLFASCQLTPSAGLKTPRQGASLQATPAKPSLQATPPSTCGVQ 205

Query: 142 SASAP 146
           S  AP
Sbjct: 206 SQGAP 210


>gi|239752010 PREDICTED: hypothetical protein XP_002348066 [Homo
           sapiens]
          Length = 211

 Score = 32.0 bits (71), Expect = 0.32
 Identities = 36/125 (28%), Positives = 43/125 (34%), Gaps = 28/125 (22%)

Query: 48  GASPTVNTDPGLLPKWGRE-------QAASRETGWKGLSPTTASLPLLRGRPCFLLRGCS 100
           G+ P V   P  LP   R         AA+R +G   L P +A+   L G         +
Sbjct: 88  GSYPPVGGPPRHLPPGPRHLRIRSRLPAAARGSGAAPLPPCSAAYTRLSGTGAREGLRIA 147

Query: 101 TPRRALHELPSRKHLRVPQFTPCSLL-------------------KPFLPVSPQGAHGVS 141
           TP R L   PSR     P F  C L                    KP L  +P    GV 
Sbjct: 148 TPVRVLD--PSRSRCHGPLFASCQLTPSAGLKTPRQGASLQATPAKPSLQATPPSTCGVQ 205

Query: 142 SASAP 146
           S  AP
Sbjct: 206 SQGAP 210


>gi|239746495 PREDICTED: hypothetical protein XP_002343746 [Homo
           sapiens]
          Length = 211

 Score = 32.0 bits (71), Expect = 0.32
 Identities = 36/125 (28%), Positives = 43/125 (34%), Gaps = 28/125 (22%)

Query: 48  GASPTVNTDPGLLPKWGRE-------QAASRETGWKGLSPTTASLPLLRGRPCFLLRGCS 100
           G+ P V   P  LP   R         AA+R +G   L P +A+   L G         +
Sbjct: 88  GSYPPVGGPPRHLPPGPRHLRIRSRLPAAARGSGAAPLPPCSAAYTRLSGTGAREGLRIA 147

Query: 101 TPRRALHELPSRKHLRVPQFTPCSLL-------------------KPFLPVSPQGAHGVS 141
           TP R L   PSR     P F  C L                    KP L  +P    GV 
Sbjct: 148 TPVRVLD--PSRSRCHGPLFASCQLTPSAGLKTPRQGASLQATPAKPSLQATPPSTCGVQ 205

Query: 142 SASAP 146
           S  AP
Sbjct: 206 SQGAP 210


>gi|126090892 aggrecan isoform 2 precursor [Homo sapiens]
          Length = 2416

 Score = 31.6 bits (70), Expect = 0.41
 Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 10/85 (11%)

Query: 2    PAHHDPQILDGDSGEEAETTTPQCGTEP--PSSGLKISAIPAASRSGPGASPTVNTDPGL 59
            P  H PQ+ +  S  +  T     G  P  P SG+++S++P +S S   A P        
Sbjct: 1945 PVTHTPQLFE--SSGKVSTAGDISGATPVLPGSGVEVSSVPESS-SETSAYPEAGFGASA 2001

Query: 60   LPKWGREQAASRETGWKGLSPTTAS 84
             P+  RE + S +     LS TT++
Sbjct: 2002 APEASREDSGSPD-----LSETTSA 2021


>gi|126090883 aggrecan isoform 1 precursor [Homo sapiens]
          Length = 2317

 Score = 31.6 bits (70), Expect = 0.41
 Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 10/85 (11%)

Query: 2    PAHHDPQILDGDSGEEAETTTPQCGTEP--PSSGLKISAIPAASRSGPGASPTVNTDPGL 59
            P  H PQ+ +  S  +  T     G  P  P SG+++S++P +S S   A P        
Sbjct: 1945 PVTHTPQLFE--SSGKVSTAGDISGATPVLPGSGVEVSSVPESS-SETSAYPEAGFGASA 2001

Query: 60   LPKWGREQAASRETGWKGLSPTTAS 84
             P+  RE + S +     LS TT++
Sbjct: 2002 APEASREDSGSPD-----LSETTSA 2021


>gi|6912458 calcineurin binding protein 1 [Homo sapiens]
          Length = 2220

 Score = 31.6 bits (70), Expect = 0.41
 Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 3/66 (4%)

Query: 22   TPQCGTEPPSSGLKISAIPAASRSGPGASPTVNTDPGLLP---KWGREQAASRETGWKGL 78
            +PQ    P SS  +    PA +  G GA PT + +  L P   + G  Q A+ ET     
Sbjct: 2035 SPQVKMAPTSSPAEPHCWPAEAALGTGAEPTCSQEGKLRPEPRRDGEAQEAASETQPLSS 2094

Query: 79   SPTTAS 84
             PT AS
Sbjct: 2095 PPTAAS 2100


>gi|29826294 golgi reassembly stacking protein 2 [Homo sapiens]
          Length = 452

 Score = 30.8 bits (68), Expect = 0.70
 Identities = 44/140 (31%), Positives = 54/140 (38%), Gaps = 16/140 (11%)

Query: 26  GTEPPSSGLKISAIPAASRSGPGASPTVNTDPGLLPKWGREQAA----SRETGWKGLSPT 81
           G E   +GL IS+ P A  S    S  V T P L P+  +   +    +  T   GL P 
Sbjct: 251 GIEQSLTGLSISSTPPAVSSV--LSTGVPTVPLLPPQVNQSLTSVPPMNPATTLPGLMPL 308

Query: 82  TASLPLLRGRPCFL-----LRGCSTPRRA---LHELPSRKHLRVPQFTPCSLLKPFLPVS 133
            A LP L      L     + G   P      L  LPS     +P   P  L   FLP  
Sbjct: 309 PAGLPNLPNLNLNLPAPHIMPGVGLPELVNPGLPPLPSMPPRNLPGIAPLPLPSEFLPSF 368

Query: 134 PQGAHGVSSASAPGGGLSSS 153
           P      SS++A  G L SS
Sbjct: 369 PLVPE--SSSAASSGELLSS 386


>gi|217416343 fibrosin-like 1 [Homo sapiens]
          Length = 1045

 Score = 30.8 bits (68), Expect = 0.70
 Identities = 39/148 (26%), Positives = 52/148 (35%), Gaps = 33/148 (22%)

Query: 13  DSGEEAETTTPQCGTEPPSSGLKISAIPAASRSGPGASPTVNTDPGLLPKWGREQAASRE 72
           D G   E +  + G  P  SGL+ S   +A    P ASP  +  P               
Sbjct: 229 DKGPALEKSEAKAGPVPKVSGLERSRELSAESFLPTASPAPHAAP--------------- 273

Query: 73  TGWKGLSPTTASLPLLRGRPCFLLRGCSTPRRALHELPSRKHLRVPQFTPCSLLKPFLPV 132
               G  P + + PL++  P                 P R   + P   P  LL   +P 
Sbjct: 274 --CPGPPPGSRANPLVKKEP---------------PAPHRHTPQPPPPQPRGLLPTHVPA 316

Query: 133 SPQGAHGVSSASAPG-GGLSSSGACPRG 159
           S     G S A+A G  GLS S + P G
Sbjct: 317 SLGAFAGHSQAAANGLHGLSRSSSAPLG 344


>gi|110227615 echinoderm microtubule associated protein like 3 [Homo
           sapiens]
          Length = 896

 Score = 30.8 bits (68), Expect = 0.70
 Identities = 19/43 (44%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 131 PVSPQGA-HGVSSASAPGGGLSSSGACPRGYQGVRHQKQPNPR 172
           P +PQGA    S   + GGG SSSGA   G  G+    QP  R
Sbjct: 106 PPAPQGASEEPSGTQSEGGGSSSSGAGSPGPPGILRPLQPPQR 148


>gi|94400919 WD repeat domain 90 [Homo sapiens]
          Length = 1748

 Score = 30.8 bits (68), Expect = 0.70
 Identities = 34/125 (27%), Positives = 42/125 (33%), Gaps = 14/125 (11%)

Query: 42   ASRSGPGASPTVNTDPGLLPKWGREQAASRETGWKGLSPTTASLPLLRGRPCFLLRGCST 101
            + +S PGA P   T PG  P       AS     +   P  AS P         L  C+ 
Sbjct: 1004 SDQSFPGAPPACKTGPGAGPLEDAASRASELPRQQVPKPCQASPP--------RLGVCAR 1055

Query: 102  PRRALHELPSRKHLRVPQFTPCSLLKPFLPV----SPQGAHGVSSASAPGGGLSSSGACP 157
            P          ++   P+ T  +  K F P     SP  A G     A GG L       
Sbjct: 1056 PPEGGDGARDTRNSGAPRTTYLASCKAFTPARVSCSPHSAKGTCPPPASGGWLRLKAVV- 1114

Query: 158  RGYQG 162
             GY G
Sbjct: 1115 -GYSG 1118


>gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 520

 Score = 30.4 bits (67), Expect = 0.92
 Identities = 29/114 (25%), Positives = 37/114 (32%), Gaps = 24/114 (21%)

Query: 67  QAASRETGWKGLSPTTASLPLLR-GRPCFLLRGCSTPRRALHELPSRKHLRVPQFTPCSL 125
           + AS  T W G  P   + P  R G  C                        PQ  P   
Sbjct: 57  EVASGRTRWTGPQPLVDTPPARRAGELC----------------------EAPQTAPGFH 94

Query: 126 LKPFLPVSPQGAHGVSSASAPGGGLSSSGACPRGYQGVRHQKQPNPRCLCCHYW 179
            +PFL +SP    G S  S P  G +  G   +  +G      P P+ L    W
Sbjct: 95  FQPFLSLSPHQERGRSKPSPPVSG-TRRGKTGQWKEGRGSHPTPEPQRLAARRW 147


>gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 520

 Score = 30.4 bits (67), Expect = 0.92
 Identities = 29/114 (25%), Positives = 37/114 (32%), Gaps = 24/114 (21%)

Query: 67  QAASRETGWKGLSPTTASLPLLR-GRPCFLLRGCSTPRRALHELPSRKHLRVPQFTPCSL 125
           + AS  T W G  P   + P  R G  C                        PQ  P   
Sbjct: 57  EVASGRTRWTGPQPLVDTPPARRAGELC----------------------EAPQTAPGFH 94

Query: 126 LKPFLPVSPQGAHGVSSASAPGGGLSSSGACPRGYQGVRHQKQPNPRCLCCHYW 179
            +PFL +SP    G S  S P  G +  G   +  +G      P P+ L    W
Sbjct: 95  FQPFLSLSPHQERGRSKPSPPVSG-TRRGKTGQWKEGRGSHPTPEPQRLAARRW 147


>gi|4505123 myelin basic protein isoform 2 [Homo sapiens]
          Length = 186

 Score = 30.4 bits (67), Expect = 0.92
 Identities = 35/129 (27%), Positives = 49/129 (37%), Gaps = 18/129 (13%)

Query: 56  DPGLLPKWGREQAASRETGWKG------LSPTTASLPL-LRGRP--CFLLRGCSTPRRAL 106
           D G+L   GR     R    +G      L P  + LP   R +P  C + +    P R  
Sbjct: 35  DTGILDSIGRFFGGDRGAPKRGSGKVPWLKPGRSPLPSHARSQPGLCNMYKDSHHPARTA 94

Query: 107 H--ELPSRKHLRVPQFTPC-----SLLKPFLPVSPQG--AHGVSSASAPGGGLSSSGACP 157
           H   LP + H R     P      +++ P  P   QG  A G       GG  S   +  
Sbjct: 95  HYGSLPQKSHGRTQDENPVVHFFKNIVTPRTPPPSQGKGAEGQRPGFGYGGRASDYKSAH 154

Query: 158 RGYQGVRHQ 166
           +G++GV  Q
Sbjct: 155 KGFKGVDAQ 163


>gi|189217876 sal-like 1 isoform b [Homo sapiens]
          Length = 1227

 Score = 30.4 bits (67), Expect = 0.92
 Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 11/60 (18%)

Query: 12  GDSGEEAE-TTTPQCGTEPPSSGLKISAIPAASRS---------GPGASPTVNTDPGLLP 61
           G   EEAE +T P  G +   SG+  +++P AS S         GP  S T  T+P LLP
Sbjct: 509 GGLPEEAEGSTLPPSGGKSEESGMVTNSVPTASSSVLSSPAADCGPAGSATTFTNP-LLP 567



 Score = 28.5 bits (62), Expect = 3.5
 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 4/52 (7%)

Query: 110  PSRKHLRVPQFTPCSLLKP----FLPVSPQGAHGVSSASAPGGGLSSSGACP 157
            P++    +P  +  SL+K     F+ VSPQ +    ++  P G LSSS   P
Sbjct: 972  PNQNSAVIPANSLSSLIKTEVNGFVHVSPQDSKDTPTSHVPSGPLSSSATSP 1023


>gi|118442837 sal-like 1 isoform a [Homo sapiens]
          Length = 1324

 Score = 30.4 bits (67), Expect = 0.92
 Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 11/60 (18%)

Query: 12  GDSGEEAE-TTTPQCGTEPPSSGLKISAIPAASRS---------GPGASPTVNTDPGLLP 61
           G   EEAE +T P  G +   SG+  +++P AS S         GP  S T  T+P LLP
Sbjct: 606 GGLPEEAEGSTLPPSGGKSEESGMVTNSVPTASSSVLSSPAADCGPAGSATTFTNP-LLP 664



 Score = 28.5 bits (62), Expect = 3.5
 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 4/52 (7%)

Query: 110  PSRKHLRVPQFTPCSLLKP----FLPVSPQGAHGVSSASAPGGGLSSSGACP 157
            P++    +P  +  SL+K     F+ VSPQ +    ++  P G LSSS   P
Sbjct: 1069 PNQNSAVIPANSLSSLIKTEVNGFVHVSPQDSKDTPTSHVPSGPLSSSATSP 1120


>gi|148747864 JAW1-related protein isoform a [Homo sapiens]
          Length = 903

 Score = 30.4 bits (67), Expect = 0.92
 Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 5/81 (6%)

Query: 5   HDPQILDGDSGEEAETTTPQCGTEPPSSGLKISAIPAASRSGPGASPTVNTDPGLLPKWG 64
           H P+  D +   E +      G  PP++G+  S  P    +G   SP   TD  L     
Sbjct: 46  HIPE--DEEPPGEPQAAQSPAGQGPPTAGVSCSPTPTIVLTGDATSPEGETDKNLA---N 100

Query: 65  REQAASRETGWKGLSPTTASL 85
           R  +  +    + L  +TASL
Sbjct: 101 RVHSPHKRLSHRHLKVSTASL 121


>gi|34013590 Rho GTPase activating protein 2 [Homo sapiens]
          Length = 698

 Score = 30.4 bits (67), Expect = 0.92
 Identities = 37/136 (27%), Positives = 58/136 (42%), Gaps = 13/136 (9%)

Query: 33  GLKISAIPAASRSGPGASPTVNTDPGLLPKWGRE--QAASRETGWKGLSPTTASLPLLRG 90
           G  ++ +   + +GPG+  +       LP W     Q  S     KG   ++  +P++  
Sbjct: 398 GAAVAVLSRTAPTGPGSRCSPGKKVQTLPSWKSSFRQPRSLSGSPKG-GGSSLEVPIISS 456

Query: 91  RPCFLLRGCST---PRRA-----LHELPSRKHLRVPQFTPCSLLKPFLP-VSPQGAHGVS 141
              +L+ G S+    RRA     L +  S + L      P   L P +P V+     G S
Sbjct: 457 GGNWLMNGLSSLRGHRRASSGDRLKDSGSVQRLSTYDNVPAPGLVPGIPSVASMAWSGAS 516

Query: 142 SA-SAPGGGLSSSGAC 156
           S+ S+ GG LSS  AC
Sbjct: 517 SSESSVGGSLSSCTAC 532


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.135    0.443 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,602,342
Number of Sequences: 37866
Number of extensions: 535375
Number of successful extensions: 2972
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 119
Number of HSP's that attempted gapping in prelim test: 2845
Number of HSP's gapped (non-prelim): 272
length of query: 186
length of database: 18,247,518
effective HSP length: 96
effective length of query: 90
effective length of database: 14,612,382
effective search space: 1315114380
effective search space used: 1315114380
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.