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Search of human proteins with 119372286
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|119372286 glycogen synthase 2 [Homo sapiens]
(703 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|119372286 glycogen synthase 2 [Homo sapiens] 1452 0.0
gi|31542868 glycogen synthase 1 (muscle) isoform 1 [Homo sapiens] 1062 0.0
gi|239049591 glycogen synthase 1 (muscle) isoform 2 [Homo sapiens] 844 0.0
gi|42560231 poliovirus receptor-related 1 isoform 2 [Homo sapiens] 37 0.063
gi|58761548 tau tubulin kinase 1 [Homo sapiens] 37 0.063
gi|164419758 bromodomain containing 2 [Homo sapiens] 37 0.063
gi|4826806 bromodomain containing 2 [Homo sapiens] 37 0.063
gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens] 36 0.14
gi|94681063 bromodomain adjacent to zinc finger domain, 2B [Homo... 35 0.18
gi|154759293 cysteine-rich hydrophobic domain 1 [Homo sapiens] 35 0.31
gi|83367077 mucin 16 [Homo sapiens] 34 0.41
gi|51173727 Sma- and Mad-related protein 1 [Homo sapiens] 33 0.69
gi|5174509 Sma- and Mad-related protein 1 [Homo sapiens] 33 0.69
gi|115430241 SCY1-like 1 isoform A [Homo sapiens] 33 0.69
gi|55741849 WD repeat domain 22 [Homo sapiens] 33 0.90
gi|7706589 GNAS complex locus NESP55 [Homo sapiens] 33 0.90
gi|195546902 suppressor of Ty 5 homolog isoform b [Homo sapiens] 33 0.90
gi|195546900 suppressor of Ty 5 homolog isoform a [Homo sapiens] 33 0.90
gi|161169023 suppressor of Ty 5 homolog isoform a [Homo sapiens] 33 0.90
gi|20149524 suppressor of Ty 5 homolog isoform a [Homo sapiens] 33 0.90
gi|157266334 tubby like protein 1 [Homo sapiens] 33 0.90
gi|25777643 potassium intermediate/small conductance calcium-act... 33 0.90
gi|27436927 synoviolin 1 isoform b [Homo sapiens] 33 1.2
gi|27436925 synoviolin 1 isoform a [Homo sapiens] 33 1.2
gi|116235474 LKB1 interacting protein [Homo sapiens] 33 1.2
gi|13129078 alveolar soft part sarcoma chromosome region, candid... 32 1.5
gi|195947401 doublesex and mab-3 related transcription factor 2 ... 32 1.5
gi|5729806 doublesex and mab-3 related transcription factor 2 is... 32 1.5
gi|153945850 doublesex and mab-3 related transcription factor 2 ... 32 1.5
gi|118600967 shroom family member 4 [Homo sapiens] 32 2.0
>gi|119372286 glycogen synthase 2 [Homo sapiens]
Length = 703
Score = 1452 bits (3760), Expect = 0.0
Identities = 703/703 (100%), Positives = 703/703 (100%)
Query: 1 MLRGRSLSVTSLGGLPQWEVEELPVEELLLFEVAWEVTNKVGGIYTVIQTKAKTTADEWG 60
MLRGRSLSVTSLGGLPQWEVEELPVEELLLFEVAWEVTNKVGGIYTVIQTKAKTTADEWG
Sbjct: 1 MLRGRSLSVTSLGGLPQWEVEELPVEELLLFEVAWEVTNKVGGIYTVIQTKAKTTADEWG 60
Query: 61 ENYFLIGPYFEHNMKTQVEQCEPVNDAVRRAVDAMNKHGCQVHFGRWLIEGSPYVVLFDI 120
ENYFLIGPYFEHNMKTQVEQCEPVNDAVRRAVDAMNKHGCQVHFGRWLIEGSPYVVLFDI
Sbjct: 61 ENYFLIGPYFEHNMKTQVEQCEPVNDAVRRAVDAMNKHGCQVHFGRWLIEGSPYVVLFDI 120
Query: 121 GYSAWNLDRWKGDLWEACSVGIPYHDREANDMLIFGSLTAWFLKEVTDHADGKYVVAQFH 180
GYSAWNLDRWKGDLWEACSVGIPYHDREANDMLIFGSLTAWFLKEVTDHADGKYVVAQFH
Sbjct: 121 GYSAWNLDRWKGDLWEACSVGIPYHDREANDMLIFGSLTAWFLKEVTDHADGKYVVAQFH 180
Query: 181 EWQAGIGLILSRARKLPIATIFTTHATLLGRYLCAANIDFYNHLDKFNIDKEAGERQIYH 240
EWQAGIGLILSRARKLPIATIFTTHATLLGRYLCAANIDFYNHLDKFNIDKEAGERQIYH
Sbjct: 181 EWQAGIGLILSRARKLPIATIFTTHATLLGRYLCAANIDFYNHLDKFNIDKEAGERQIYH 240
Query: 241 RYCMERASVHCAHVFTTVSEITAIEAEHMLKRKPDVVTPNGLNVKKFSAVHEFQNLHAMY 300
RYCMERASVHCAHVFTTVSEITAIEAEHMLKRKPDVVTPNGLNVKKFSAVHEFQNLHAMY
Sbjct: 241 RYCMERASVHCAHVFTTVSEITAIEAEHMLKRKPDVVTPNGLNVKKFSAVHEFQNLHAMY 300
Query: 301 KARIQDFVRGHFYGHLDFDLEKTLFLFIAGRYEFSNKGADIFLESLSRLNFLLRMHKSDI 360
KARIQDFVRGHFYGHLDFDLEKTLFLFIAGRYEFSNKGADIFLESLSRLNFLLRMHKSDI
Sbjct: 301 KARIQDFVRGHFYGHLDFDLEKTLFLFIAGRYEFSNKGADIFLESLSRLNFLLRMHKSDI 360
Query: 361 TVMVFFIMPAKTNNFNVETLKGQAVRKQLWDVAHSVKEKFGKKLYDALLRGEIPDLNDIL 420
TVMVFFIMPAKTNNFNVETLKGQAVRKQLWDVAHSVKEKFGKKLYDALLRGEIPDLNDIL
Sbjct: 361 TVMVFFIMPAKTNNFNVETLKGQAVRKQLWDVAHSVKEKFGKKLYDALLRGEIPDLNDIL 420
Query: 421 DRDDLTIMKRAIFSTQRQSLPPVTTHNMIDDSTDPILSTIRRIGLFNNRTDRVKVILHPE 480
DRDDLTIMKRAIFSTQRQSLPPVTTHNMIDDSTDPILSTIRRIGLFNNRTDRVKVILHPE
Sbjct: 421 DRDDLTIMKRAIFSTQRQSLPPVTTHNMIDDSTDPILSTIRRIGLFNNRTDRVKVILHPE 480
Query: 481 FLSSTSPLLPMDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMQE 540
FLSSTSPLLPMDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMQE
Sbjct: 481 FLSSTSPLLPMDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMQE 540
Query: 541 HVADPTAYGIYIVDRRFRSPDDSCNQLTKFLYGFCKQSRRQRIIQRNRTERLSDLLDWRY 600
HVADPTAYGIYIVDRRFRSPDDSCNQLTKFLYGFCKQSRRQRIIQRNRTERLSDLLDWRY
Sbjct: 541 HVADPTAYGIYIVDRRFRSPDDSCNQLTKFLYGFCKQSRRQRIIQRNRTERLSDLLDWRY 600
Query: 601 LGRYYQHARHLTLSRAFPDKFHVELTSPPTTEGFKYPRPSSVPPSPSGSQASSPQSSDVE 660
LGRYYQHARHLTLSRAFPDKFHVELTSPPTTEGFKYPRPSSVPPSPSGSQASSPQSSDVE
Sbjct: 601 LGRYYQHARHLTLSRAFPDKFHVELTSPPTTEGFKYPRPSSVPPSPSGSQASSPQSSDVE 660
Query: 661 DEVEDERYDEEEEAERDRLNIKSPFSLSHVPHGKKKLHGEYKN 703
DEVEDERYDEEEEAERDRLNIKSPFSLSHVPHGKKKLHGEYKN
Sbjct: 661 DEVEDERYDEEEEAERDRLNIKSPFSLSHVPHGKKKLHGEYKN 703
>gi|31542868 glycogen synthase 1 (muscle) isoform 1 [Homo sapiens]
Length = 737
Score = 1062 bits (2746), Expect = 0.0
Identities = 498/688 (72%), Positives = 594/688 (86%), Gaps = 9/688 (1%)
Query: 5 RSLSVTSLGGLPQWEVEELPVEELLLFEVAWEVTNKVGGIYTVIQTKAKTTADEWGENYF 64
R+LS++SL GL WE +E +E +LFEVAWEV NKVGGIYTV+QTKAK T DEWG+NYF
Sbjct: 5 RTLSMSSLPGLEDWE-DEFDLENAVLFEVAWEVANKVGGIYTVLQTKAKVTGDEWGDNYF 63
Query: 65 LIGPYFEHNMKTQVEQCEPVNDAVRRAVDAMNKHGCQVHFGRWLIEGSPYVVLFDIGYSA 124
L+GPY E ++TQVE E A++R +D+MN GC+V+FGRWLIEG P VVL D+G SA
Sbjct: 64 LVGPYTEQGVRTQVELLEAPTPALKRTLDSMNSKGCKVYFGRWLIEGGPLVVLLDVGASA 123
Query: 125 WNLDRWKGDLWEACSVGIPYHDREANDMLIFGSLTAWFLKEVTDHADGK-YVVAQFHEWQ 183
W L+RWKG+LW+ C++G+P++DREAND ++FG LT WFL E ++ K +VVA FHEW
Sbjct: 124 WALERWKGELWDTCNIGVPWYDREANDAVLFGFLTTWFLGEFLAQSEEKPHVVAHFHEWL 183
Query: 184 AGIGLILSRARKLPIATIFTTHATLLGRYLCAANIDFYNHLDKFNIDKEAGERQIYHRYC 243
AG+GL L RAR+LP+ATIFTTHATLLGRYLCA +DFYN+L+ FN+DKEAGERQIYHRYC
Sbjct: 184 AGVGLCLCRARRLPVATIFTTHATLLGRYLCAGAVDFYNNLENFNVDKEAGERQIYHRYC 243
Query: 244 MERASVHCAHVFTTVSEITAIEAEHMLKRKPDVVTPNGLNVKKFSAVHEFQNLHAMYKAR 303
MERA+ HCAHVFTTVS+ITAIEA+H+LKRKPD+VTPNGLNVKKFSA+HEFQNLHA KAR
Sbjct: 244 MERAAAHCAHVFTTVSQITAIEAQHLLKRKPDIVTPNGLNVKKFSAMHEFQNLHAQSKAR 303
Query: 304 IQDFVRGHFYGHLDFDLEKTLFLFIAGRYEFSNKGADIFLESLSRLNFLLRMHKSDITVM 363
IQ+FVRGHFYGHLDF+L+KTL+ FIAGRYEFSNKGAD+FLE+L+RLN+LLR++ S+ TV+
Sbjct: 304 IQEFVRGHFYGHLDFNLDKTLYFFIAGRYEFSNKGADVFLEALARLNYLLRVNGSEQTVV 363
Query: 364 VFFIMPAKTNNFNVETLKGQAVRKQLWDVAHSVKEKFGKKLYDALLRGEIPDLNDILDRD 423
FFIMPA+TNNFNVETLKGQAVRKQLWD A++VKEKFG+KLY++LL G +PD+N +LD++
Sbjct: 364 AFFIMPARTNNFNVETLKGQAVRKQLWDTANTVKEKFGRKLYESLLVGSLPDMNKMLDKE 423
Query: 424 DLTIMKRAIFSTQRQSLPPVTTHNMIDDSTDPILSTIRRIGLFNNRTDRVKVILHPEFLS 483
D T+MKRAIF+TQRQS PPV THNM+DDS+DPIL+TIRRIGLFN+ DRVKVI HPEFLS
Sbjct: 424 DFTMMKRAIFATQRQSFPPVCTHNMLDDSSDPILTTIRRIGLFNSSADRVKVIFHPEFLS 483
Query: 484 STSPLLPMDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMQEHVA 543
STSPLLP+DYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPS++TNLSGFGCFM+EH+A
Sbjct: 484 STSPLLPVDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSISTNLSGFGCFMEEHIA 543
Query: 544 DPTAYGIYIVDRRFRSPDDSCNQLTKFLYGFCKQSRRQRIIQRNRTERLSDLLDWRYLGR 603
DP+AYGIYI+DRRFRS DDSC+QLT FLY FC+QSRRQRIIQRNRTERLSDLLDW+YLGR
Sbjct: 544 DPSAYGIYILDRRFRSLDDSCSQLTSFLYSFCQQSRRQRIIQRNRTERLSDLLDWKYLGR 603
Query: 604 YYQHARHLTLSRAFPDKFHVELTSPPTTEGFKYPRPSSVPPSPSGSQASSP-QSSDVED- 661
YY ARH+ LS+AFP+ F E +G++YPRP+SVPPSPS S+ SSP QS D ED
Sbjct: 604 YYMSARHMALSKAFPEHFTYEPNEADAAQGYRYPRPASVPPSPSLSRHSSPHQSEDEEDP 663
Query: 662 -----EVEDERYDEEEEAERDRLNIKSP 684
E + ERYDE+EEA +DR NI++P
Sbjct: 664 RNGPLEEDGERYDEDEEAAKDRRNIRAP 691
>gi|239049591 glycogen synthase 1 (muscle) isoform 2 [Homo sapiens]
Length = 673
Score = 844 bits (2180), Expect = 0.0
Identities = 397/518 (76%), Positives = 463/518 (89%), Gaps = 7/518 (1%)
Query: 174 YVVAQFHEWQAGIGLILSRARKLPIATIFTTHATLLGRYLCAANIDFYNHLDKFNIDKEA 233
+VVA FHEW AG+GL L RAR+LP+ATIFTTHATLLGRYLCA +DFYN+L+ FN+DKEA
Sbjct: 110 HVVAHFHEWLAGVGLCLCRARRLPVATIFTTHATLLGRYLCAGAVDFYNNLENFNVDKEA 169
Query: 234 GERQIYHRYCMERASVHCAHVFTTVSEITAIEAEHMLKRKPDVVTPNGLNVKKFSAVHEF 293
GERQIYHRYCMERA+ HCAHVFTTVS+ITAIEA+H+LKRKPD+VTPNGLNVKKFSA+HEF
Sbjct: 170 GERQIYHRYCMERAAAHCAHVFTTVSQITAIEAQHLLKRKPDIVTPNGLNVKKFSAMHEF 229
Query: 294 QNLHAMYKARIQDFVRGHFYGHLDFDLEKTLFLFIAGRYEFSNKGADIFLESLSRLNFLL 353
QNLHA KARIQ+FVRGHFYGHLDF+L+KTL+ FIAGRYEFSNKGAD+FLE+L+RLN+LL
Sbjct: 230 QNLHAQSKARIQEFVRGHFYGHLDFNLDKTLYFFIAGRYEFSNKGADVFLEALARLNYLL 289
Query: 354 RMHKSDITVMVFFIMPAKTNNFNVETLKGQAVRKQLWDVAHSVKEKFGKKLYDALLRGEI 413
R++ S+ TV+ FFIMPA+TNNFNVETLKGQAVRKQLWD A++VKEKFG+KLY++LL G +
Sbjct: 290 RVNGSEQTVVAFFIMPARTNNFNVETLKGQAVRKQLWDTANTVKEKFGRKLYESLLVGSL 349
Query: 414 PDLNDILDRDDLTIMKRAIFSTQRQSLPPVTTHNMIDDSTDPILSTIRRIGLFNNRTDRV 473
PD+N +LD++D T+MKRAIF+TQRQS PPV THNM+DDS+DPIL+TIRRIGLFN+ DRV
Sbjct: 350 PDMNKMLDKEDFTMMKRAIFATQRQSFPPVCTHNMLDDSSDPILTTIRRIGLFNSSADRV 409
Query: 474 KVILHPEFLSSTSPLLPMDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSG 533
KVI HPEFLSSTSPLLP+DYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPS++TNLSG
Sbjct: 410 KVIFHPEFLSSTSPLLPVDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSISTNLSG 469
Query: 534 FGCFMQEHVADPTAYGIYIVDRRFRSPDDSCNQLTKFLYGFCKQSRRQRIIQRNRTERLS 593
FGCFM+EH+ADP+AYGIYI+DRRFRS DDSC+QLT FLY FC+QSRRQRIIQRNRTERLS
Sbjct: 470 FGCFMEEHIADPSAYGIYILDRRFRSLDDSCSQLTSFLYSFCQQSRRQRIIQRNRTERLS 529
Query: 594 DLLDWRYLGRYYQHARHLTLSRAFPDKFHVELTSPPTTEGFKYPRPSSVPPSPSGSQASS 653
DLLDW+YLGRYY ARH+ LS+AFP+ F E +G++YPRP+SVPPSPS S+ SS
Sbjct: 530 DLLDWKYLGRYYMSARHMALSKAFPEHFTYEPNEADAAQGYRYPRPASVPPSPSLSRHSS 589
Query: 654 P-QSSDVED------EVEDERYDEEEEAERDRLNIKSP 684
P QS D ED E + ERYDE+EEA +DR NI++P
Sbjct: 590 PHQSEDEEDPRNGPLEEDGERYDEDEEAAKDRRNIRAP 627
Score = 126 bits (317), Expect = 6e-29
Identities = 62/116 (53%), Positives = 78/116 (67%), Gaps = 13/116 (11%)
Query: 5 RSLSVTSLGGLPQWEVEELPVEELLLFEVAWEVTNKVGGIYTVIQTKAKTTADEWGENYF 64
R+LS++SL GL WE +E +E +LFEVAWEV NKVGGIYTV+QTKAK T DEWG+NYF
Sbjct: 5 RTLSMSSLPGLEDWE-DEFDLENAVLFEVAWEVANKVGGIYTVLQTKAKVTGDEWGDNYF 63
Query: 65 LIGPYFEHNMKTQVEQCEPVNDAVRRAVDAMNKHGCQ------------VHFGRWL 108
L+GPY E ++TQVE E A++R +D+MN GC+ HF WL
Sbjct: 64 LVGPYTEQGVRTQVELLEAPTPALKRTLDSMNSKGCKFLAQSEEKPHVVAHFHEWL 119
>gi|42560231 poliovirus receptor-related 1 isoform 2 [Homo sapiens]
Length = 458
Score = 37.0 bits (84), Expect = 0.063
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 627 SPPTTEGFKYPRPSSVPPSPSGSQASSPQSSDVE-DEVEDERYDEEEEAERDRLNIKSPF 685
SPP T+G +P S P PS S+ SS D++ ++ R ++EE + +L+++ P+
Sbjct: 376 SPPETDGAGTDQPLSQKPEPSPSRQSSLVPEDIQVVHLDPGRQQQQEEEDLQKLSLQPPY 435
>gi|58761548 tau tubulin kinase 1 [Homo sapiens]
Length = 1321
Score = 37.0 bits (84), Expect = 0.063
Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 14/84 (16%)
Query: 594 DLLDWRYLGRYYQHARHLTLSRAFPDKFHVELTSPPTTEGFKYPRPSSVPPSPSGSQASS 653
DL D+R R R + S H+ LT+P + V P +G +
Sbjct: 691 DLSDYRERARLLNRVRRVGFS-------HMLLTTPQVPL-------APVQPQANGKEEEE 736
Query: 654 PQSSDVEDEVEDERYDEEEEAERD 677
+ D E+E EDE +EEEE E +
Sbjct: 737 EEEEDEEEEEEDEEEEEEEEEEEE 760
>gi|164419758 bromodomain containing 2 [Homo sapiens]
Length = 801
Score = 37.0 bits (84), Expect = 0.063
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 8/73 (10%)
Query: 611 LTLSRAFPDKFHVELTSPPTT--EGFKYPRPSSVPP------SPSGSQASSPQSSDVEDE 662
+ ++R D F P E P +++PP S S S+ SS +SS E+E
Sbjct: 436 VAMARKLQDVFEFRYAKMPDEPLEPGPLPVSTAMPPGLAKSSSESSSEESSSESSSEEEE 495
Query: 663 VEDERYDEEEEAE 675
EDE +EEEE+E
Sbjct: 496 EEDEEDEEEEESE 508
>gi|4826806 bromodomain containing 2 [Homo sapiens]
Length = 801
Score = 37.0 bits (84), Expect = 0.063
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 8/73 (10%)
Query: 611 LTLSRAFPDKFHVELTSPPTT--EGFKYPRPSSVPP------SPSGSQASSPQSSDVEDE 662
+ ++R D F P E P +++PP S S S+ SS +SS E+E
Sbjct: 436 VAMARKLQDVFEFRYAKMPDEPLEPGPLPVSTAMPPGLAKSSSESSSEESSSESSSEEEE 495
Query: 663 VEDERYDEEEEAE 675
EDE +EEEE+E
Sbjct: 496 EEDEEDEEEEESE 508
>gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]
Length = 1312
Score = 35.8 bits (81), Expect = 0.14
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 619 DKFHV--ELTSPPTTEGFKYPRPSSVPPSPSGSQASSPQSSDVEDEVEDERYDEEEEAER 676
D FH E SPP KY +PS S A +P + E+E E+E +EE+E E
Sbjct: 229 DPFHPTDEAYSPPPAPEQKYDPFEPTGSNPSSS-AGTPSPEEEEEEEEEEEEEEEDEEEE 287
Query: 677 DRLN 680
+ L+
Sbjct: 288 EGLS 291
>gi|94681063 bromodomain adjacent to zinc finger domain, 2B [Homo
sapiens]
Length = 2168
Score = 35.4 bits (80), Expect = 0.18
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 627 SPPTTEGFKYPRPSSVPPSPSGSQASSPQSSDVEDEVEDERYDEEEEAERD 677
+P T+ +P S V G+ + P S D ED EDE D+EEE E D
Sbjct: 573 NPVKTQHHSHPAKSLVEQF-RGTDSDIPSSKDSEDSNEDEEEDDEEEDEED 622
>gi|154759293 cysteine-rich hydrophobic domain 1 [Homo sapiens]
Length = 224
Score = 34.7 bits (78), Expect = 0.31
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 645 SPSGSQASSPQSSDVEDEVEDERYDEEEEAERDRLNIKSP 684
SPS S + S D EDE E+E +EEEE E + ++P
Sbjct: 31 SPSSSSSVSGPDDDEEDEEEEEEEEEEEEEEEEEEEEEAP 70
Score = 30.8 bits (68), Expect = 4.5
Identities = 16/45 (35%), Positives = 22/45 (48%)
Query: 640 SSVPPSPSGSQASSPQSSDVEDEVEDERYDEEEEAERDRLNIKSP 684
SS PS S S + + E+E E+E +EEEE E + P
Sbjct: 28 SSSSPSSSSSVSGPDDDEEDEEEEEEEEEEEEEEEEEEEEEAPPP 72
>gi|83367077 mucin 16 [Homo sapiens]
Length = 14507
Score = 34.3 bits (77), Expect = 0.41
Identities = 33/121 (27%), Positives = 49/121 (40%), Gaps = 19/121 (15%)
Query: 553 VDRRFRSPDDSCNQLTK-FLYGFCKQSRRQRIIQRNRTERLSD--LLDWRYLGRYYQHAR 609
+DR +PD S +T+ F +S + + T + +L W +Q
Sbjct: 5534 LDRPTIAPDISTGMITRLFTSPIMTKSAEMTVTTQTTTPGATSQGILPWDTSTTLFQGGT 5593
Query: 610 HLTLSRAFPDKFHVEL-----------TSPP---TTEGFKYPRPSSVPPSPSGSQASSPQ 655
H T+S+ FP L T+PP T+ GF PS PSP S +SP+
Sbjct: 5594 HSTVSQGFPHSEITTLRSRTPGDVSWMTTPPVEETSSGFSLMSPSMTSPSPVSS--TSPE 5651
Query: 656 S 656
S
Sbjct: 5652 S 5652
>gi|51173727 Sma- and Mad-related protein 1 [Homo sapiens]
Length = 465
Score = 33.5 bits (75), Expect = 0.69
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 8/67 (11%)
Query: 595 LLDWRYLGRYYQHARHLTLSRAFPDKFHVELTSPPTTEGFKYPRPSSVPPSPSGSQASSP 654
L +R LG Q+ H+ L+ FPD F P + F + SS P SP S ++ P
Sbjct: 153 LAQFRNLG---QNEPHMPLNATFPDSFQ-----QPNSHPFPHSPNSSYPNSPGSSSSTYP 204
Query: 655 QSSDVED 661
S D
Sbjct: 205 HSPTSSD 211
>gi|5174509 Sma- and Mad-related protein 1 [Homo sapiens]
Length = 465
Score = 33.5 bits (75), Expect = 0.69
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 8/67 (11%)
Query: 595 LLDWRYLGRYYQHARHLTLSRAFPDKFHVELTSPPTTEGFKYPRPSSVPPSPSGSQASSP 654
L +R LG Q+ H+ L+ FPD F P + F + SS P SP S ++ P
Sbjct: 153 LAQFRNLG---QNEPHMPLNATFPDSFQ-----QPNSHPFPHSPNSSYPNSPGSSSSTYP 204
Query: 655 QSSDVED 661
S D
Sbjct: 205 HSPTSSD 211
>gi|115430241 SCY1-like 1 isoform A [Homo sapiens]
Length = 808
Score = 33.5 bits (75), Expect = 0.69
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 613 LSRAFPDKFHVELTSP--PTTEGFKYPRPSSVPPSPSGSQASSPQSSD---VEDEVEDER 667
L R+ P E P PT EG P P+ VP +P+ S Q D ED +R
Sbjct: 584 LIRSHPTTAPTETNIPQRPTPEGVPAPAPTPVPATPTTSGHWETQEEDKDTAEDSSTADR 643
Query: 668 YDEEE 672
+D+E+
Sbjct: 644 WDDED 648
>gi|55741849 WD repeat domain 22 [Homo sapiens]
Length = 942
Score = 33.1 bits (74), Expect = 0.90
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 10/81 (12%)
Query: 587 NRTERLSDLLDWRYLGRYYQHARHLTLSRAFPDKFHVELTSPPTTEGFKYPRPSSVPPSP 646
+R +RLS L R YQ R L LS + +V T +PRP S P
Sbjct: 508 SRQQRLSAL-------RRYQDKRLLALSNESDSEENVCEVELDTD---LFPRPRSPSPED 557
Query: 647 SGSQASSPQSSDVEDEVEDER 667
S +SS SS+ E+E+ + R
Sbjct: 558 ESSSSSSSSSSEDEEELNERR 578
>gi|7706589 GNAS complex locus NESP55 [Homo sapiens]
Length = 245
Score = 33.1 bits (74), Expect = 0.90
Identities = 20/88 (22%), Positives = 32/88 (36%), Gaps = 2/88 (2%)
Query: 609 RHLTLSRAFPDKFHVELTSPPTTEGFKYPRPSSVPPSPSGSQASSPQSSDVEDEVEDERY 668
+H T ++ + H P + P + P SP + P+ D D E +
Sbjct: 151 KHSTFGQSLTQRLHALKLRSPDASPSRAPPSTQEPQSPREGEELKPEDKDPRDPEESK-- 208
Query: 669 DEEEEAERDRLNIKSPFSLSHVPHGKKK 696
+ +EE +R R K P P K
Sbjct: 209 EPKEEKQRRRCKPKKPTRRDASPESPSK 236
>gi|195546902 suppressor of Ty 5 homolog isoform b [Homo sapiens]
Length = 1083
Score = 33.1 bits (74), Expect = 0.90
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 645 SPSGSQASSPQSSDVEDEVEDERYDEEEEAERDRLNIKSP 684
S +GS+ + D E+E E+E YDEEEE E D K P
Sbjct: 32 SAAGSEKEE-EPEDEEEEEEEEEYDEEEEEEDDDRPPKKP 70
>gi|195546900 suppressor of Ty 5 homolog isoform a [Homo sapiens]
Length = 1087
Score = 33.1 bits (74), Expect = 0.90
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 645 SPSGSQASSPQSSDVEDEVEDERYDEEEEAERDRLNIKSP 684
S +GS+ + D E+E E+E YDEEEE E D K P
Sbjct: 32 SAAGSEKEE-EPEDEEEEEEEEEYDEEEEEEDDDRPPKKP 70
>gi|161169023 suppressor of Ty 5 homolog isoform a [Homo sapiens]
Length = 1087
Score = 33.1 bits (74), Expect = 0.90
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 645 SPSGSQASSPQSSDVEDEVEDERYDEEEEAERDRLNIKSP 684
S +GS+ + D E+E E+E YDEEEE E D K P
Sbjct: 32 SAAGSEKEE-EPEDEEEEEEEEEYDEEEEEEDDDRPPKKP 70
>gi|20149524 suppressor of Ty 5 homolog isoform a [Homo sapiens]
Length = 1087
Score = 33.1 bits (74), Expect = 0.90
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 645 SPSGSQASSPQSSDVEDEVEDERYDEEEEAERDRLNIKSP 684
S +GS+ + D E+E E+E YDEEEE E D K P
Sbjct: 32 SAAGSEKEE-EPEDEEEEEEEEEYDEEEEEEDDDRPPKKP 70
>gi|157266334 tubby like protein 1 [Homo sapiens]
Length = 542
Score = 33.1 bits (74), Expect = 0.90
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 637 PRPSSVPPSPSGSQASSPQSSDVEDEVEDERYDEEEEAERDRLNIKSP 684
P P + A +P + D E+E E++ DEEEEAE + I P
Sbjct: 95 PEAKKRDPRETFLVARAPDAEDEEEEEEEDEEDEEEEAEEKKEKILLP 142
>gi|25777643 potassium intermediate/small conductance
calcium-activated channel, subfamily N, member 1 [Homo
sapiens]
Length = 543
Score = 33.1 bits (74), Expect = 0.90
Identities = 27/78 (34%), Positives = 34/78 (43%), Gaps = 8/78 (10%)
Query: 613 LSRAFPDKFHVELTSPPTTEGFKYPRPSSVPPSPS-GSQASSPQSSDVEDEVEDERYDEE 671
L R PD PP + G + S P PS GS PQ D D+ DEE
Sbjct: 21 LGRDPPDPEAGHPPQPPHSPGLQVVVAKSEPARPSPGSPRGQPQDQD------DDEDDEE 74
Query: 672 EEAERDRLNIKSPFSLSH 689
+EA R R + K P ++ H
Sbjct: 75 DEAGRQRASGK-PSNVGH 91
>gi|27436927 synoviolin 1 isoform b [Homo sapiens]
Length = 617
Score = 32.7 bits (73), Expect = 1.2
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 626 TSPPTTEGFKYPRPSSVPPSPSGSQASSPQSSDVEDEVEDERYDEEEEAERDRLNIKSP 684
TS P++E P P + PP+P + +P+S E+ ED D E R ++SP
Sbjct: 557 TSIPSSEATT-PTPGASPPAPEMERPPAPESVGTEEMPEDGEPDAAELRRRRLQKLESP 614
>gi|27436925 synoviolin 1 isoform a [Homo sapiens]
Length = 616
Score = 32.7 bits (73), Expect = 1.2
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 626 TSPPTTEGFKYPRPSSVPPSPSGSQASSPQSSDVEDEVEDERYDEEEEAERDRLNIKSP 684
TS P++E P P + PP+P + +P+S E+ ED D E R ++SP
Sbjct: 556 TSIPSSEATT-PTPGASPPAPEMERPPAPESVGTEEMPEDGEPDAAELRRRRLQKLESP 613
>gi|116235474 LKB1 interacting protein [Homo sapiens]
Length = 1099
Score = 32.7 bits (73), Expect = 1.2
Identities = 35/119 (29%), Positives = 50/119 (42%), Gaps = 22/119 (18%)
Query: 579 RRQRIIQRNRTERLSDLLDWRYLGRYYQHARHLTLSRAFPDKF---------HVE----- 624
RR I + + T+ L+ G + Q L L +F ++F H+E
Sbjct: 395 RRASISEPSDTDPEPRTLNPSPAGWFVQQHPELELMSSFRERFGRNWLQYRSHLEPSGNP 454
Query: 625 LTSPPTTEGFKYPR-----PSSVP-PSPSGSQASSPQSS--DVEDEVEDERYDEEEEAE 675
L + PTT P P + P PSP +A PQ S + +EV E +EEEE E
Sbjct: 455 LPATPTTSAPSAPPASSQGPDTAPRPSPPQEEARGPQESPQKMSEEVRAEPQEEEEEKE 513
>gi|13129078 alveolar soft part sarcoma chromosome region, candidate
1 [Homo sapiens]
Length = 553
Score = 32.3 bits (72), Expect = 1.5
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 626 TSPPTTEGFKYPRPSSVPPSPSGSQAS-SPQSSDVEDEVEDERYDEEEEAERDR 678
T P T+ K P+ S P PS + S S Q E E E ER D ++E ER+R
Sbjct: 259 TRPLTSSSAKLPKSLSSPGGPSKPKKSKSGQDPQQEQEQERER-DPQQEQERER 311
>gi|195947401 doublesex and mab-3 related transcription factor 2
isoform 1 [Homo sapiens]
Length = 226
Score = 32.3 bits (72), Expect = 1.5
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Query: 639 PSSVPPSPSGSQASSPQSSDVEDEVEDERYDEEEEAERD 677
P S PP PS P D ED+ +D+ DE+ E E D
Sbjct: 30 PRSTPPGPS----PPPADGDCEDDEDDDGVDEDAEEEGD 64
>gi|5729806 doublesex and mab-3 related transcription factor 2
isoform 1 [Homo sapiens]
Length = 226
Score = 32.3 bits (72), Expect = 1.5
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Query: 639 PSSVPPSPSGSQASSPQSSDVEDEVEDERYDEEEEAERD 677
P S PP PS P D ED+ +D+ DE+ E E D
Sbjct: 30 PRSTPPGPS----PPPADGDCEDDEDDDGVDEDAEEEGD 64
>gi|153945850 doublesex and mab-3 related transcription factor 2
isoform 2 [Homo sapiens]
Length = 561
Score = 32.3 bits (72), Expect = 1.5
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Query: 639 PSSVPPSPSGSQASSPQSSDVEDEVEDERYDEEEEAERD 677
P S PP PS P D ED+ +D+ DE+ E E D
Sbjct: 30 PRSTPPGPS----PPPADGDCEDDEDDDGVDEDAEEEGD 64
>gi|118600967 shroom family member 4 [Homo sapiens]
Length = 1493
Score = 32.0 bits (71), Expect = 2.0
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 628 PPTTEGFKYPRPSSVPPSPSGSQASSPQSSDVEDEVEDERYDEEEEAERD 677
PP E ++ R + Q + + E+E E+E +EEEEAE +
Sbjct: 1106 PPNWEKYRLFRAAQQQKQQQQQQKQQEEEEEEEEEEEEEEEEEEEEAEEE 1155
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.137 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,421,005
Number of Sequences: 37866
Number of extensions: 1279765
Number of successful extensions: 8122
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 50
Number of HSP's that attempted gapping in prelim test: 7528
Number of HSP's gapped (non-prelim): 425
length of query: 703
length of database: 18,247,518
effective HSP length: 109
effective length of query: 594
effective length of database: 14,120,124
effective search space: 8387353656
effective search space used: 8387353656
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.