Guide to the Human Genome
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Search of human proteins with 239753160

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239753160 PREDICTED: hypothetical protein XP_002345578 [Homo
sapiens]
         (130 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239753160 PREDICTED: hypothetical protein XP_002345578 [Homo ...   275   7e-75
gi|239747730 PREDICTED: hypothetical protein XP_002348256 [Homo ...   275   7e-75
gi|239741596 PREDICTED: hypothetical protein XP_002342245 [Homo ...   271   1e-73
gi|239745314 PREDICTED: similar to hCG1803335 [Homo sapiens]           36   0.008
gi|32307166 Rho guanine exchange factor 15 [Homo sapiens]              36   0.010
gi|239750954 PREDICTED: hypothetical protein XP_002347616 [Homo ...    35   0.013
gi|239745360 PREDICTED: hypothetical protein XP_002343446 [Homo ...    35   0.013
gi|14165439 heterogeneous nuclear ribonucleoprotein K isoform a ...    35   0.017
gi|14165435 heterogeneous nuclear ribonucleoprotein K isoform b ...    35   0.017
gi|14165437 heterogeneous nuclear ribonucleoprotein K isoform a ...    35   0.017
gi|169790811 SHC (Src homology 2 domain containing) transforming...    35   0.022
gi|215820635 protein phosphatase 1, regulatory subunit 13 like [...    34   0.029
gi|63003907 protein phosphatase 1, regulatory subunit 13 like [H...    34   0.029
gi|239750101 PREDICTED: hypothetical protein [Homo sapiens]            33   0.064
gi|14916427 naked cuticle homolog 2 [Homo sapiens]                     33   0.064
gi|187936955 HHIP-like protein 1 isoform a [Homo sapiens]              33   0.064
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]     33   0.083
gi|239750916 PREDICTED: similar to hCG1803335 [Homo sapiens]           32   0.11 
gi|239742740 PREDICTED: hypothetical protein XP_002342615 [Homo ...    32   0.14 
gi|157743252 pecanex-like 3 [Homo sapiens]                             32   0.14 
gi|169207312 PREDICTED: hypothetical protein [Homo sapiens]            32   0.19 
gi|239750650 PREDICTED: hypothetical protein [Homo sapiens]            32   0.19 
gi|89037350 PREDICTED: hypothetical protein [Homo sapiens]             32   0.19 
gi|8923789 FEV (ETS oncogene family) [Homo sapiens]                    32   0.19 
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]        32   0.19 
gi|145966685 TLX1 divergent [Homo sapiens]                             31   0.24 
gi|239751123 PREDICTED: hypothetical protein XP_002347725 [Homo ...    31   0.24 
gi|239741753 PREDICTED: hypothetical protein [Homo sapiens]            31   0.24 
gi|20986497 mitogen-activated protein kinase 7 isoform 1 [Homo s...    31   0.24 
gi|209529736 mitogen-activated protein kinase 7 isoform 1 [Homo ...    31   0.24 

>gi|239753160 PREDICTED: hypothetical protein XP_002345578 [Homo
           sapiens]
          Length = 130

 Score =  275 bits (703), Expect = 7e-75
 Identities = 130/130 (100%), Positives = 130/130 (100%)

Query: 1   MVPRWKSSAVPAGSLSYFETGEIFQERRSHGTLTLGHLISAASPDGRAAQPTPLGLSRRS 60
           MVPRWKSSAVPAGSLSYFETGEIFQERRSHGTLTLGHLISAASPDGRAAQPTPLGLSRRS
Sbjct: 1   MVPRWKSSAVPAGSLSYFETGEIFQERRSHGTLTLGHLISAASPDGRAAQPTPLGLSRRS 60

Query: 61  LLGASPRGAPRPQCGWPGHRAAARAPLPTPRPPCSRYRGDGRKNGTASRGCADRSLRRNC 120
           LLGASPRGAPRPQCGWPGHRAAARAPLPTPRPPCSRYRGDGRKNGTASRGCADRSLRRNC
Sbjct: 61  LLGASPRGAPRPQCGWPGHRAAARAPLPTPRPPCSRYRGDGRKNGTASRGCADRSLRRNC 120

Query: 121 PEGSRPTPAA 130
           PEGSRPTPAA
Sbjct: 121 PEGSRPTPAA 130


>gi|239747730 PREDICTED: hypothetical protein XP_002348256 [Homo
           sapiens]
          Length = 130

 Score =  275 bits (703), Expect = 7e-75
 Identities = 130/130 (100%), Positives = 130/130 (100%)

Query: 1   MVPRWKSSAVPAGSLSYFETGEIFQERRSHGTLTLGHLISAASPDGRAAQPTPLGLSRRS 60
           MVPRWKSSAVPAGSLSYFETGEIFQERRSHGTLTLGHLISAASPDGRAAQPTPLGLSRRS
Sbjct: 1   MVPRWKSSAVPAGSLSYFETGEIFQERRSHGTLTLGHLISAASPDGRAAQPTPLGLSRRS 60

Query: 61  LLGASPRGAPRPQCGWPGHRAAARAPLPTPRPPCSRYRGDGRKNGTASRGCADRSLRRNC 120
           LLGASPRGAPRPQCGWPGHRAAARAPLPTPRPPCSRYRGDGRKNGTASRGCADRSLRRNC
Sbjct: 61  LLGASPRGAPRPQCGWPGHRAAARAPLPTPRPPCSRYRGDGRKNGTASRGCADRSLRRNC 120

Query: 121 PEGSRPTPAA 130
           PEGSRPTPAA
Sbjct: 121 PEGSRPTPAA 130


>gi|239741596 PREDICTED: hypothetical protein XP_002342245 [Homo
           sapiens]
          Length = 130

 Score =  271 bits (692), Expect = 1e-73
 Identities = 129/130 (99%), Positives = 129/130 (99%)

Query: 1   MVPRWKSSAVPAGSLSYFETGEIFQERRSHGTLTLGHLISAASPDGRAAQPTPLGLSRRS 60
           MVPRWKSSAVPAGSLSYFETGEIFQERRSHGTLTLGHLISAASPDGRAAQPTPLGLSRRS
Sbjct: 1   MVPRWKSSAVPAGSLSYFETGEIFQERRSHGTLTLGHLISAASPDGRAAQPTPLGLSRRS 60

Query: 61  LLGASPRGAPRPQCGWPGHRAAARAPLPTPRPPCSRYRGDGRKNGTASRGCADRSLRRNC 120
           LLGASPRGAPRPQCGWPGHRAAARAPLPTPRPP SRYRGDGRKNGTASRGCADRSLRRNC
Sbjct: 61  LLGASPRGAPRPQCGWPGHRAAARAPLPTPRPPWSRYRGDGRKNGTASRGCADRSLRRNC 120

Query: 121 PEGSRPTPAA 130
           PEGSRPTPAA
Sbjct: 121 PEGSRPTPAA 130


>gi|239745314 PREDICTED: similar to hCG1803335 [Homo sapiens]
          Length = 238

 Score = 36.2 bits (82), Expect = 0.008
 Identities = 29/84 (34%), Positives = 38/84 (45%), Gaps = 10/84 (11%)

Query: 36  GHLISAASPDGRAAQPTPLGLSRRSLLGASPRG---APRPQCGWPGHRAAARA--PLPTP 90
           GH +SA     RA +  P   S+R     S R    AP PQ  + GHR +ARA   +P P
Sbjct: 139 GHRVSA-----RATESVPGPQSQRQGHRVSSRATESAPGPQSQFQGHRVSARATESVPGP 193

Query: 91  RPPCSRYRGDGRKNGTASRGCADR 114
           +  C  +R   R   + S   A R
Sbjct: 194 QSQCQGHRVSSRATESVSGSGASR 217



 Score = 31.2 bits (69), Expect = 0.24
 Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 8/64 (12%)

Query: 36  GHLISAASPDGRAAQPTPLGLSRRSLLGASPRG---APRPQCGWPGHRAAARAPLPTPRP 92
           GH +S+     RA +  P   S+R     S R    AP PQ  + GHR +ARA    P P
Sbjct: 99  GHRVSS-----RATESVPGPQSQRQGHRVSSRATESAPGPQSQFQGHRVSARATESVPGP 153

Query: 93  PCSR 96
              R
Sbjct: 154 QSQR 157



 Score = 28.5 bits (62), Expect = 1.6
 Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 5/63 (7%)

Query: 70  PRPQCGWPGHRAAARA--PLPTPRPPCSRYRGDGRKNGTASRGCADRSLRRNCPEGSRPT 127
           P PQ  + GHR +ARA   +P P+  C  +R   R   +       +S R+     SR T
Sbjct: 71  PGPQSQFQGHRVSARATESVPGPQSQCQGHRVSSRATESVP---GPQSQRQGHRVSSRAT 127

Query: 128 PAA 130
            +A
Sbjct: 128 ESA 130


>gi|32307166 Rho guanine exchange factor 15 [Homo sapiens]
          Length = 841

 Score = 35.8 bits (81), Expect = 0.010
 Identities = 29/77 (37%), Positives = 38/77 (49%), Gaps = 22/77 (28%)

Query: 38  LISAASPDGRAAQPTPLGLSRRSLLGASPRGAPRPQCGWPGHRAAARAPLPTPRP---PC 94
           L S  SPD  ++ PTP  +SRRS   ASP  AP             R+P+P P+P   PC
Sbjct: 85  LDSQTSPDSPSSTPTPSPVSRRS---ASPEPAP-------------RSPVPPPKPSGSPC 128

Query: 95  S---RYRGDGRKNGTAS 108
           +      G   +NG+AS
Sbjct: 129 TPLLPMAGVLAQNGSAS 145


>gi|239750954 PREDICTED: hypothetical protein XP_002347616 [Homo
           sapiens]
          Length = 194

 Score = 35.4 bits (80), Expect = 0.013
 Identities = 31/96 (32%), Positives = 35/96 (36%), Gaps = 12/96 (12%)

Query: 37  HLISAASPDGRAAQPTPLGLSRRSLLGASPRGAPRPQCGWPGHRA-------AARAPLPT 89
           H+   A   GR       G+    LL   P     P CG PG  A        A  PL T
Sbjct: 92  HIWQEAEGGGRTVHNQLRGIGGHQLLQTWPEA---PLCGRPGQGAWGAGPTREAPPPLET 148

Query: 90  PRPPCSRYRGDGRKNGTASRGCADRSLRRNCPEGSR 125
           P PP  R   D R  G A    A R  + +C   SR
Sbjct: 149 PAPPMPRPNEDPRYGGPALG--AGRPSQSSCQASSR 182


>gi|239745360 PREDICTED: hypothetical protein XP_002343446 [Homo
           sapiens]
          Length = 194

 Score = 35.4 bits (80), Expect = 0.013
 Identities = 31/96 (32%), Positives = 35/96 (36%), Gaps = 12/96 (12%)

Query: 37  HLISAASPDGRAAQPTPLGLSRRSLLGASPRGAPRPQCGWPGHRA-------AARAPLPT 89
           H+   A   GR       G+    LL   P     P CG PG  A        A  PL T
Sbjct: 92  HIWQEAEGGGRTVHNQLRGIGGHQLLQTWPEA---PLCGRPGQGAWGAGPTREAPPPLET 148

Query: 90  PRPPCSRYRGDGRKNGTASRGCADRSLRRNCPEGSR 125
           P PP  R   D R  G A    A R  + +C   SR
Sbjct: 149 PAPPMPRPNEDPRYGGPALG--AGRPSQSSCQASSR 182


>gi|14165439 heterogeneous nuclear ribonucleoprotein K isoform a
           [Homo sapiens]
          Length = 464

 Score = 35.0 bits (79), Expect = 0.017
 Identities = 23/53 (43%), Positives = 25/53 (47%), Gaps = 5/53 (9%)

Query: 44  PDGRAAQPTPLGLSRRSLLGASPRGAPRPQCGWPGHRAAARA---PLPTPRPP 93
           P GR  +P P   SRR     SPR  P P     G R  +RA   PLP P PP
Sbjct: 265 PPGRGGRPMPP--SRRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPPPPP 315


>gi|14165435 heterogeneous nuclear ribonucleoprotein K isoform b
           [Homo sapiens]
          Length = 463

 Score = 35.0 bits (79), Expect = 0.017
 Identities = 23/53 (43%), Positives = 25/53 (47%), Gaps = 5/53 (9%)

Query: 44  PDGRAAQPTPLGLSRRSLLGASPRGAPRPQCGWPGHRAAARA---PLPTPRPP 93
           P GR  +P P   SRR     SPR  P P     G R  +RA   PLP P PP
Sbjct: 265 PPGRGGRPMPP--SRRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPPPPP 315


>gi|14165437 heterogeneous nuclear ribonucleoprotein K isoform a
           [Homo sapiens]
          Length = 464

 Score = 35.0 bits (79), Expect = 0.017
 Identities = 23/53 (43%), Positives = 25/53 (47%), Gaps = 5/53 (9%)

Query: 44  PDGRAAQPTPLGLSRRSLLGASPRGAPRPQCGWPGHRAAARA---PLPTPRPP 93
           P GR  +P P   SRR     SPR  P P     G R  +RA   PLP P PP
Sbjct: 265 PPGRGGRPMPP--SRRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPPPPP 315


>gi|169790811 SHC (Src homology 2 domain containing) transforming
           protein 2 [Homo sapiens]
          Length = 582

 Score = 34.7 bits (78), Expect = 0.022
 Identities = 23/73 (31%), Positives = 28/73 (38%), Gaps = 11/73 (15%)

Query: 40  SAASPDGRAAQPTPLGLSRRSLLGASPRGAPRPQCGWPGHRAAARAPLPTPRPPCSRYRG 99
           +A +  G   QP P G      L A+  GA  P+C             P P P  SR RG
Sbjct: 53  AAGASGGADPQPEPAGPGGVPALAAAVLGACEPRCA-----------APCPLPALSRCRG 101

Query: 100 DGRKNGTASRGCA 112
            G +     RG A
Sbjct: 102 AGSRGSRGGRGAA 114


>gi|215820635 protein phosphatase 1, regulatory subunit 13 like
           [Homo sapiens]
          Length = 828

 Score = 34.3 bits (77), Expect = 0.029
 Identities = 35/104 (33%), Positives = 44/104 (42%), Gaps = 8/104 (7%)

Query: 3   PRWKSSAVPA-----GSLSYFET-GEIFQERRSHGTLTLGHLISAASPDGRAAQP-TPLG 55
           PR+ SS++P      GS     T G      RS    TL H  S  SP GR + P TPL 
Sbjct: 68  PRYSSSSIPEPFGSRGSPRKAATDGADTPFGRSESAPTL-HPYSPLSPKGRPSSPRTPLY 126

Query: 56  LSRRSLLGASPRGAPRPQCGWPGHRAAARAPLPTPRPPCSRYRG 99
           L   +        +PRP+       +  RAP P P P   R +G
Sbjct: 127 LQPDAYGSLDRATSPRPRAFDGAGSSLGRAPSPRPGPGPLRQQG 170



 Score = 27.3 bits (59), Expect = 3.5
 Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 7/60 (11%)

Query: 51  PTPLGLSRRSLLGASPRGAPRPQCGWPGHRAAARAPLPTPRPPCSRYRGDGRKNGTASRG 110
           PTP     R+    SPRG+P  +    G +A      P+PRPP + Y       G++  G
Sbjct: 172 PTPFDFLGRA---GSPRGSPLAE----GPQAFFPERGPSPRPPATAYDAPASAFGSSLLG 224


>gi|63003907 protein phosphatase 1, regulatory subunit 13 like [Homo
           sapiens]
          Length = 828

 Score = 34.3 bits (77), Expect = 0.029
 Identities = 35/104 (33%), Positives = 44/104 (42%), Gaps = 8/104 (7%)

Query: 3   PRWKSSAVPA-----GSLSYFET-GEIFQERRSHGTLTLGHLISAASPDGRAAQP-TPLG 55
           PR+ SS++P      GS     T G      RS    TL H  S  SP GR + P TPL 
Sbjct: 68  PRYSSSSIPEPFGSRGSPRKAATDGADTPFGRSESAPTL-HPYSPLSPKGRPSSPRTPLY 126

Query: 56  LSRRSLLGASPRGAPRPQCGWPGHRAAARAPLPTPRPPCSRYRG 99
           L   +        +PRP+       +  RAP P P P   R +G
Sbjct: 127 LQPDAYGSLDRATSPRPRAFDGAGSSLGRAPSPRPGPGPLRQQG 170



 Score = 27.3 bits (59), Expect = 3.5
 Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 7/60 (11%)

Query: 51  PTPLGLSRRSLLGASPRGAPRPQCGWPGHRAAARAPLPTPRPPCSRYRGDGRKNGTASRG 110
           PTP     R+    SPRG+P  +    G +A      P+PRPP + Y       G++  G
Sbjct: 172 PTPFDFLGRA---GSPRGSPLAE----GPQAFFPERGPSPRPPATAYDAPASAFGSSLLG 224


>gi|239750101 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 365

 Score = 33.1 bits (74), Expect = 0.064
 Identities = 29/72 (40%), Positives = 32/72 (44%), Gaps = 14/72 (19%)

Query: 40  SAASPDGRAAQPTPLGLSRRSLLGASPRGAPRPQCGWPGHRAAARAPLPTPRP--PCSRY 97
           +AASPD     P P   SR     A PR  PRP         AAR P P P P  P    
Sbjct: 290 AAASPD----LPQPAERSRGEPRPAEPRAPPRPP-------PAARRPPPPPAPGAPARPL 338

Query: 98  RGDGRKNGTASR 109
           RG  R +G A+R
Sbjct: 339 RG-RRSHGPAAR 349


>gi|14916427 naked cuticle homolog 2 [Homo sapiens]
          Length = 451

 Score = 33.1 bits (74), Expect = 0.064
 Identities = 42/156 (26%), Positives = 63/156 (40%), Gaps = 38/156 (24%)

Query: 3   PRWKSSAVPAGSLSYFETGEIFQERRSHGTLTLGHLISAASPDGRA--AQPTPLGLSRRS 60
           P+ ++S + A S S          RRS   + + H++ A+ P  RA   QP P G  ++ 
Sbjct: 273 PQGRASHLQARSRSQEPDTHAVHHRRSQ--VLVEHVVPASEPAARALDTQPRPKGPEKQF 330

Query: 61  LLGASPRGAPRPQCGWPGHRAAARA------------------PLPTPRPP---CSRYRG 99
           L   SP+G+ +P  G P    + +A                   LP P PP     RYR 
Sbjct: 331 L--KSPKGSGKPP-GVPASSKSGKAFSYYLPAVLPPQAPQDGHHLPQPPPPPYGHKRYRQ 387

Query: 100 DGRKNGT------ASRGCADRSLRRNCPEGSRPTPA 129
            GR+  +      A     +  + R+ P    PTPA
Sbjct: 388 KGREGHSPLKAPHAQPATVEHEVVRDLP----PTPA 419


>gi|187936955 HHIP-like protein 1 isoform a [Homo sapiens]
          Length = 782

 Score = 33.1 bits (74), Expect = 0.064
 Identities = 28/71 (39%), Positives = 31/71 (43%), Gaps = 15/71 (21%)

Query: 67  RGAPRPQCGWPGH-----RAAARAPLPTPRP------PCSRYRGDGRKNG---TASRGCA 112
           R  PRP    P       R  A  P PTPRP      P SR RG GR+ G   +ASR   
Sbjct: 611 RSTPRPTARAPTRAPRRGRPTAAPPAPTPRPARPTQQPGSR-RGGGRRRGRLNSASRAFR 669

Query: 113 DRSLRRNCPEG 123
           D  +R   P G
Sbjct: 670 DGEVRLVRPAG 680


>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
          Length = 538

 Score = 32.7 bits (73), Expect = 0.083
 Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 1/68 (1%)

Query: 63  GASPRGAPRPQCGWPGHRAAARAPLPTPRPPCSRYRGDGRKNGTASRGCADRSLRRNCPE 122
           GA+P   PR   G P   AAA AP PTP PP             A R  A  +     P 
Sbjct: 105 GATPPAPPRAPRGAPA-AAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPG 163

Query: 123 GSRPTPAA 130
            ++P P A
Sbjct: 164 PAQPGPRA 171



 Score = 28.5 bits (62), Expect = 1.6
 Identities = 20/60 (33%), Positives = 24/60 (40%), Gaps = 7/60 (11%)

Query: 40  SAASPDGRAAQPTPLGLSRRSLLGASPRGA-------PRPQCGWPGHRAAARAPLPTPRP 92
           +AA+P    A P P      +    +PR A       P P    PG RA   APL  P P
Sbjct: 123 AAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQRAAPLAAPPP 182


>gi|239750916 PREDICTED: similar to hCG1803335 [Homo sapiens]
          Length = 246

 Score = 32.3 bits (72), Expect = 0.11
 Identities = 24/64 (37%), Positives = 29/64 (45%), Gaps = 8/64 (12%)

Query: 36  GHLISAASPDGRAAQPTPLGLSRRSLLGASPRG---APRPQCGWPGHRAAARAPLPTPRP 92
           GH +SA     RA +  P   S+R     S R    AP PQ  + GHR +ARA    P P
Sbjct: 139 GHRVSA-----RATESVPGPQSQRQGHRVSSRATESAPGPQSQFQGHRVSARATESVPGP 193

Query: 93  PCSR 96
              R
Sbjct: 194 QSQR 197



 Score = 32.0 bits (71), Expect = 0.14
 Identities = 25/69 (36%), Positives = 33/69 (47%), Gaps = 9/69 (13%)

Query: 36  GHLISAASPDGRAAQPTPLGLSRRSLLGASPRGA---PRPQCGWPGHRAAARAPLPTPRP 92
           GH +SA     RA +  P   S+R     S R     P PQ  + GHR +ARA    P P
Sbjct: 179 GHRVSA-----RATESVPGPQSQRQGHRVSSRATESVPGPQSQFQGHRVSARATESVPGP 233

Query: 93  PCSRYRGDG 101
             S+++G G
Sbjct: 234 Q-SQFQGAG 241



 Score = 30.0 bits (66), Expect = 0.54
 Identities = 23/64 (35%), Positives = 28/64 (43%), Gaps = 8/64 (12%)

Query: 36  GHLISAASPDGRAAQPTPLGLSRRSLLGASPRG---APRPQCGWPGHRAAARAPLPTPRP 92
           GH +S+     RA +  P   S+R     S R    AP PQ    GHR +ARA    P P
Sbjct: 99  GHRVSS-----RATESVPGPQSQRQGHRVSARATESAPGPQSQCQGHRVSARATESVPGP 153

Query: 93  PCSR 96
              R
Sbjct: 154 QSQR 157



 Score = 28.1 bits (61), Expect = 2.1
 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 2/35 (5%)

Query: 70  PRPQCGWPGHRAAARA--PLPTPRPPCSRYRGDGR 102
           P PQ  + GHR +ARA   +P P+  C  +R   R
Sbjct: 71  PGPQSQFQGHRVSARATESVPGPQSQCQGHRVSSR 105


>gi|239742740 PREDICTED: hypothetical protein XP_002342615 [Homo
           sapiens]
          Length = 159

 Score = 32.0 bits (71), Expect = 0.14
 Identities = 26/74 (35%), Positives = 32/74 (43%), Gaps = 16/74 (21%)

Query: 38  LISAASPDGRAAQPTPLGL-------------SRRSLLGASPRGAPRPQCGWPGHRAAAR 84
           ++S+  P GRA  P  L L             +RRS     PR +  P+ G  GH  AA 
Sbjct: 35  IVSSVRPPGRAPGPGTLFLLGKGSPRLAQHPAARRSHGSRLPRTSGSPEEGVSGHGPAAA 94

Query: 85  APLP---TPRPPCS 95
           A LP    P PP S
Sbjct: 95  ASLPRAQVPTPPPS 108


>gi|157743252 pecanex-like 3 [Homo sapiens]
          Length = 2034

 Score = 32.0 bits (71), Expect = 0.14
 Identities = 23/61 (37%), Positives = 25/61 (40%), Gaps = 5/61 (8%)

Query: 46   GRAAQPTPLG--LSRRSLLGASPRGAPRPQCGWPGHRAAA---RAPLPTPRPPCSRYRGD 100
            G   QP P G     RS L  S  G P P   WP  R       +P+PT  P  SR  G 
Sbjct: 1865 GNGDQPLPPGPGWGPRSSLSGSGDGRPPPLLQWPPPRLPGPPPASPIPTEGPRTSRPPGP 1924

Query: 101  G 101
            G
Sbjct: 1925 G 1925


>gi|169207312 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 414

 Score = 31.6 bits (70), Expect = 0.19
 Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 5/82 (6%)

Query: 51  PTPLGLSRRSLLGASPRGAPRP--QCGWPGHRAAARAPLPTPRPPCSRYRGDGRKNGTAS 108
           P P  LS R+ L ++P   P+P  Q   P   +  R   P PR      +  GR  G  +
Sbjct: 83  PRPASLSPRAALASAPGQKPQPARQAQLPRPVSGVR---PPPRGRVGLSQAPGRPLGACA 139

Query: 109 RGCADRSLRRNCPEGSRPTPAA 130
           R    R +  + P    P PA+
Sbjct: 140 RAKGIRLVNPSPPRPPEPIPAS 161


>gi|239750650 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 414

 Score = 31.6 bits (70), Expect = 0.19
 Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 5/82 (6%)

Query: 51  PTPLGLSRRSLLGASPRGAPRP--QCGWPGHRAAARAPLPTPRPPCSRYRGDGRKNGTAS 108
           P P  LS R+ L ++P   P+P  Q   P   +  R   P PR      +  GR  G  +
Sbjct: 83  PRPASLSPRAALASAPGQKPQPARQAQLPRPVSGVR---PPPRGRVGLSQAPGRPLGACA 139

Query: 109 RGCADRSLRRNCPEGSRPTPAA 130
           R    R +  + P    P PA+
Sbjct: 140 RAKGIRLVNPSPPRPPEPIPAS 161


>gi|89037350 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 414

 Score = 31.6 bits (70), Expect = 0.19
 Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 5/82 (6%)

Query: 51  PTPLGLSRRSLLGASPRGAPRP--QCGWPGHRAAARAPLPTPRPPCSRYRGDGRKNGTAS 108
           P P  LS R+ L ++P   P+P  Q   P   +  R   P PR      +  GR  G  +
Sbjct: 83  PRPASLSPRAALASAPGQKPQPARQAQLPRPVSGVR---PPPRGRVGLSQAPGRPLGACA 139

Query: 109 RGCADRSLRRNCPEGSRPTPAA 130
           R    R +  + P    P PA+
Sbjct: 140 RAKGIRLVNPSPPRPPEPIPAS 161


>gi|8923789 FEV (ETS oncogene family) [Homo sapiens]
          Length = 238

 Score = 31.6 bits (70), Expect = 0.19
 Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 9/58 (15%)

Query: 44  PDGRAAQPTPLGLSRRSLLGASPRGAPRPQCGWPGHRAAARA--------PLPTPRPP 93
           P G A  P P GLS+ +L+ AS   AP     WPG   AA A        P P+ +PP
Sbjct: 164 PAGLAPLPFP-GLSKLNLMAASAGVAPAGFSYWPGPGPAATAAAATAALYPSPSLQPP 220


>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
          Length = 2752

 Score = 31.6 bits (70), Expect = 0.19
 Identities = 35/114 (30%), Positives = 46/114 (40%), Gaps = 37/114 (32%)

Query: 40   SAASPDGRAAQPTPL------GLS-----------RRSLLGAS------PRGAPRPQCGW 76
            S +SPD +A   TPL      G S           RRS  G+S      PR APR Q G 
Sbjct: 1559 SDSSPDSKAKTRTPLRQRSRSGSSPEVDSKSRLSPRRSRSGSSPEVKDKPRAAPRAQSGS 1618

Query: 77   PGHRAAARAPLPTPRPPCSRYRGDGRKNGTASRGCADRSLRRNCPEGSRPTPAA 130
                       P P+ P  R      ++G++S+G      R   PEGS  T ++
Sbjct: 1619 DSS--------PEPKAPAPRALPRRSRSGSSSKG------RGPSPEGSSSTESS 1658



 Score = 29.6 bits (65), Expect = 0.71
 Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 14/91 (15%)

Query: 40   SAASPDGRAAQPTPLGLSRRSLLGASPRG-APRPQCGWPGHRAAARAPLPTPRPPCSRYR 98
            S +SP+ +A  P P  L RRS  G+S +G  P P+    G  +   +P     PP SR  
Sbjct: 1618 SDSSPEPKA--PAPRALPRRSRSGSSSKGRGPSPE----GSSSTESSP---EHPPKSRTA 1668

Query: 99   GDGRKNG----TASRGCADRSLRRNCPEGSR 125
              G ++     T SR    R   R+ PE +R
Sbjct: 1669 RRGSRSSPEPKTKSRTPPRRRSSRSSPELTR 1699



 Score = 27.3 bits (59), Expect = 3.5
 Identities = 24/85 (28%), Positives = 31/85 (36%), Gaps = 3/85 (3%)

Query: 40   SAASPDGRAAQPTPLGLSRRSLLGASPRGAPRPQCGWPGHRAAARAPLPTPRPPCSRYRG 99
            S +SP  R    TP   SR SL G+SP     P+    G      +P P   P   R R 
Sbjct: 1441 SGSSPGLRDGSGTP---SRHSLSGSSPGMKDIPRTPSRGRSECDSSPEPKALPQTPRPRS 1497

Query: 100  DGRKNGTASRGCADRSLRRNCPEGS 124
                +   +  C      R+  E S
Sbjct: 1498 RSPSSPELNNKCLTPQRERSGSESS 1522


>gi|145966685 TLX1 divergent [Homo sapiens]
          Length = 122

 Score = 31.2 bits (69), Expect = 0.24
 Identities = 16/33 (48%), Positives = 17/33 (51%)

Query: 38 LISAASPDGRAAQPTPLGLSRRSLLGASPRGAP 70
          L   A   G  A+PTP G  R    GASP GAP
Sbjct: 23 LSQEAMGPGEGAEPTPWGYLRAEHWGASPSGAP 55


>gi|239751123 PREDICTED: hypothetical protein XP_002347725 [Homo
           sapiens]
          Length = 296

 Score = 31.2 bits (69), Expect = 0.24
 Identities = 31/89 (34%), Positives = 37/89 (41%), Gaps = 17/89 (19%)

Query: 35  LGHLISAASPDG-RAAQPTPLGL------------SRRSLLGASPRGAPRPQCGWPGHRA 81
           +GH   AA+P   RAA P   GL            SRR     +P  +  P C  P   A
Sbjct: 185 VGHGHLAAAPGAWRAAAPAGWGLGSARAAQRPREGSRRFPAPPAPERSRTPDC--PAAPA 242

Query: 82  AARAPLPTPRPPCSRYRGDGRKNGTASRG 110
           A R  +  PR P  R RG GR  G +  G
Sbjct: 243 APR--MRRPRRPPHRLRGQGRVKGNSLWG 269


>gi|239741753 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 274

 Score = 31.2 bits (69), Expect = 0.24
 Identities = 32/113 (28%), Positives = 39/113 (34%), Gaps = 22/113 (19%)

Query: 30  HGTLTLGHLISAASPDGRAAQPTPLGLSRRSLLGASPRGAPRPQCGWPGHRAAARAPLPT 89
           H TL    L+   S D +  +  P   +R +   A PR      C   GH    R P  T
Sbjct: 61  HQTLQRASLLPGGSAD-KDQEREPSLAARGTAPPAPPRQCLPTPCPPLGHGLRPRPPPGT 119

Query: 90  PRPPCSRYRGDG------------RKNGTASRGCADRSLRRNCPEGSRPTPAA 130
           P P C R    G             + G A +  ADR          RP PAA
Sbjct: 120 PPPRCPRTLAPGPRGLFPAPPPAPARTGPAGKAAADR---------GRPGPAA 163


>gi|20986497 mitogen-activated protein kinase 7 isoform 1 [Homo
           sapiens]
          Length = 816

 Score = 31.2 bits (69), Expect = 0.24
 Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 6/53 (11%)

Query: 44  PDGRAAQPTPLGLSRRSLLGASPRGAPRPQCGWPG---HRAAARAPLPTPRPP 93
           P G  AQPT  G   +S  G++    P+P C  PG   H      P+P P PP
Sbjct: 606 PPGPVAQPT--GPQPQSA-GSTSGPVPQPACPPPGPAPHPTGPPGPIPVPAPP 655


>gi|209529736 mitogen-activated protein kinase 7 isoform 1 [Homo
           sapiens]
          Length = 816

 Score = 31.2 bits (69), Expect = 0.24
 Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 6/53 (11%)

Query: 44  PDGRAAQPTPLGLSRRSLLGASPRGAPRPQCGWPG---HRAAARAPLPTPRPP 93
           P G  AQPT  G   +S  G++    P+P C  PG   H      P+P P PP
Sbjct: 606 PPGPVAQPT--GPQPQSA-GSTSGPVPQPACPPPGPAPHPTGPPGPIPVPAPP 655


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.133    0.431 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,059,863
Number of Sequences: 37866
Number of extensions: 456507
Number of successful extensions: 2552
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 259
Number of HSP's that attempted gapping in prelim test: 2290
Number of HSP's gapped (non-prelim): 522
length of query: 130
length of database: 18,247,518
effective HSP length: 90
effective length of query: 40
effective length of database: 14,839,578
effective search space: 593583120
effective search space used: 593583120
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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