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Search of human proteins with 239752639
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239752639 PREDICTED: hypothetical protein XP_002347643 [Homo
sapiens]
(129 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239752639 PREDICTED: hypothetical protein XP_002347643 [Homo ... 267 2e-72
gi|239754588 PREDICTED: similar to SLC29A4 protein [Homo sapiens] 245 6e-66
gi|239743194 PREDICTED: similar to SLC29A4 protein [Homo sapiens] 233 4e-62
gi|239743171 PREDICTED: hypothetical protein XP_002342767 [Homo ... 233 4e-62
gi|239508863 PREDICTED: similar to SLC29A4 protein [Homo sapiens] 233 4e-62
gi|239508835 PREDICTED: similar to SLC29A4 protein [Homo sapiens] 233 4e-62
gi|100913034 solute carrier family 29 (nucleoside transporters),... 160 3e-40
gi|100913032 solute carrier family 29 (nucleoside transporters),... 160 3e-40
gi|148596922 solute carrier family 29 (nucleoside transporters),... 40 4e-04
gi|38708299 solute carrier family 29 (nucleoside transporters), ... 37 0.003
gi|118582267 equilibrative nucleoside transporter 1 [Homo sapiens] 36 0.007
gi|118582265 equilibrative nucleoside transporter 1 [Homo sapiens] 36 0.007
gi|118582262 equilibrative nucleoside transporter 1 [Homo sapiens] 36 0.007
gi|118582260 equilibrative nucleoside transporter 1 [Homo sapiens] 36 0.007
gi|4826716 equilibrative nucleoside transporter 1 [Homo sapiens] 36 0.007
gi|134031945 SCO-spondin [Homo sapiens] 30 0.40
gi|239754544 PREDICTED: hypothetical protein [Homo sapiens] 30 0.69
gi|239749109 PREDICTED: hypothetical protein XP_002346915 [Homo ... 30 0.69
gi|239743138 PREDICTED: hypothetical protein XP_002342745 [Homo ... 30 0.69
gi|239508796 PREDICTED: hypothetical protein [Homo sapiens] 30 0.69
gi|118572606 hemicentin 1 [Homo sapiens] 29 1.2
gi|39653317 jumonji domain containing 2D [Homo sapiens] 29 1.2
gi|161019170 mucin 5AC [Homo sapiens] 28 1.5
gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens] 28 1.5
gi|94536854 thrombospondin, type I, domain containing 4 [Homo sa... 28 2.0
gi|51093381 leptin receptor isoform 3 [Homo sapiens] 28 2.6
gi|51093379 leptin receptor isoform 2 [Homo sapiens] 28 2.6
gi|40254464 leptin receptor isoform 1 [Homo sapiens] 28 2.6
gi|40806187 ADAM metallopeptidase with thrombospondin type 1 mot... 27 4.5
gi|40317628 thrombospondin 2 precursor [Homo sapiens] 27 4.5
>gi|239752639 PREDICTED: hypothetical protein XP_002347643 [Homo
sapiens]
Length = 129
Score = 267 bits (683), Expect = 2e-72
Identities = 129/129 (100%), Positives = 129/129 (100%)
Query: 1 MDSGHALEEPVPNDRYHAIYFAMLLSGVGFLLPYNSFITDVDYLHHKYPGTSIVFDMSLT 60
MDSGHALEEPVPNDRYHAIYFAMLLSGVGFLLPYNSFITDVDYLHHKYPGTSIVFDMSLT
Sbjct: 1 MDSGHALEEPVPNDRYHAIYFAMLLSGVGFLLPYNSFITDVDYLHHKYPGTSIVFDMSLT 60
Query: 61 YILVALAAVLLNNVLVERLTLHTRITATSVTCGCSSSLGTRPTPSTWLLWAPWPSAAQVN 120
YILVALAAVLLNNVLVERLTLHTRITATSVTCGCSSSLGTRPTPSTWLLWAPWPSAAQVN
Sbjct: 61 YILVALAAVLLNNVLVERLTLHTRITATSVTCGCSSSLGTRPTPSTWLLWAPWPSAAQVN 120
Query: 121 PGGGVRQAS 129
PGGGVRQAS
Sbjct: 121 PGGGVRQAS 129
>gi|239754588 PREDICTED: similar to SLC29A4 protein [Homo sapiens]
Length = 193
Score = 245 bits (626), Expect = 6e-66
Identities = 118/118 (100%), Positives = 118/118 (100%)
Query: 1 MDSGHALEEPVPNDRYHAIYFAMLLSGVGFLLPYNSFITDVDYLHHKYPGTSIVFDMSLT 60
MDSGHALEEPVPNDRYHAIYFAMLLSGVGFLLPYNSFITDVDYLHHKYPGTSIVFDMSLT
Sbjct: 1 MDSGHALEEPVPNDRYHAIYFAMLLSGVGFLLPYNSFITDVDYLHHKYPGTSIVFDMSLT 60
Query: 61 YILVALAAVLLNNVLVERLTLHTRITATSVTCGCSSSLGTRPTPSTWLLWAPWPSAAQ 118
YILVALAAVLLNNVLVERLTLHTRITATSVTCGCSSSLGTRPTPSTWLLWAPWPSAAQ
Sbjct: 61 YILVALAAVLLNNVLVERLTLHTRITATSVTCGCSSSLGTRPTPSTWLLWAPWPSAAQ 118
>gi|239743194 PREDICTED: similar to SLC29A4 protein [Homo sapiens]
Length = 307
Score = 233 bits (593), Expect = 4e-62
Identities = 112/112 (100%), Positives = 112/112 (100%)
Query: 7 LEEPVPNDRYHAIYFAMLLSGVGFLLPYNSFITDVDYLHHKYPGTSIVFDMSLTYILVAL 66
LEEPVPNDRYHAIYFAMLLSGVGFLLPYNSFITDVDYLHHKYPGTSIVFDMSLTYILVAL
Sbjct: 58 LEEPVPNDRYHAIYFAMLLSGVGFLLPYNSFITDVDYLHHKYPGTSIVFDMSLTYILVAL 117
Query: 67 AAVLLNNVLVERLTLHTRITATSVTCGCSSSLGTRPTPSTWLLWAPWPSAAQ 118
AAVLLNNVLVERLTLHTRITATSVTCGCSSSLGTRPTPSTWLLWAPWPSAAQ
Sbjct: 118 AAVLLNNVLVERLTLHTRITATSVTCGCSSSLGTRPTPSTWLLWAPWPSAAQ 169
>gi|239743171 PREDICTED: hypothetical protein XP_002342767 [Homo
sapiens]
Length = 307
Score = 233 bits (593), Expect = 4e-62
Identities = 112/112 (100%), Positives = 112/112 (100%)
Query: 7 LEEPVPNDRYHAIYFAMLLSGVGFLLPYNSFITDVDYLHHKYPGTSIVFDMSLTYILVAL 66
LEEPVPNDRYHAIYFAMLLSGVGFLLPYNSFITDVDYLHHKYPGTSIVFDMSLTYILVAL
Sbjct: 58 LEEPVPNDRYHAIYFAMLLSGVGFLLPYNSFITDVDYLHHKYPGTSIVFDMSLTYILVAL 117
Query: 67 AAVLLNNVLVERLTLHTRITATSVTCGCSSSLGTRPTPSTWLLWAPWPSAAQ 118
AAVLLNNVLVERLTLHTRITATSVTCGCSSSLGTRPTPSTWLLWAPWPSAAQ
Sbjct: 118 AAVLLNNVLVERLTLHTRITATSVTCGCSSSLGTRPTPSTWLLWAPWPSAAQ 169
>gi|239508863 PREDICTED: similar to SLC29A4 protein [Homo sapiens]
Length = 307
Score = 233 bits (593), Expect = 4e-62
Identities = 112/112 (100%), Positives = 112/112 (100%)
Query: 7 LEEPVPNDRYHAIYFAMLLSGVGFLLPYNSFITDVDYLHHKYPGTSIVFDMSLTYILVAL 66
LEEPVPNDRYHAIYFAMLLSGVGFLLPYNSFITDVDYLHHKYPGTSIVFDMSLTYILVAL
Sbjct: 58 LEEPVPNDRYHAIYFAMLLSGVGFLLPYNSFITDVDYLHHKYPGTSIVFDMSLTYILVAL 117
Query: 67 AAVLLNNVLVERLTLHTRITATSVTCGCSSSLGTRPTPSTWLLWAPWPSAAQ 118
AAVLLNNVLVERLTLHTRITATSVTCGCSSSLGTRPTPSTWLLWAPWPSAAQ
Sbjct: 118 AAVLLNNVLVERLTLHTRITATSVTCGCSSSLGTRPTPSTWLLWAPWPSAAQ 169
>gi|239508835 PREDICTED: similar to SLC29A4 protein [Homo sapiens]
Length = 307
Score = 233 bits (593), Expect = 4e-62
Identities = 112/112 (100%), Positives = 112/112 (100%)
Query: 7 LEEPVPNDRYHAIYFAMLLSGVGFLLPYNSFITDVDYLHHKYPGTSIVFDMSLTYILVAL 66
LEEPVPNDRYHAIYFAMLLSGVGFLLPYNSFITDVDYLHHKYPGTSIVFDMSLTYILVAL
Sbjct: 58 LEEPVPNDRYHAIYFAMLLSGVGFLLPYNSFITDVDYLHHKYPGTSIVFDMSLTYILVAL 117
Query: 67 AAVLLNNVLVERLTLHTRITATSVTCGCSSSLGTRPTPSTWLLWAPWPSAAQ 118
AAVLLNNVLVERLTLHTRITATSVTCGCSSSLGTRPTPSTWLLWAPWPSAAQ
Sbjct: 118 AAVLLNNVLVERLTLHTRITATSVTCGCSSSLGTRPTPSTWLLWAPWPSAAQ 169
>gi|100913034 solute carrier family 29 (nucleoside transporters),
member 4 [Homo sapiens]
Length = 530
Score = 160 bits (404), Expect = 3e-40
Identities = 78/81 (96%), Positives = 81/81 (100%)
Query: 7 LEEPVPNDRYHAIYFAMLLSGVGFLLPYNSFITDVDYLHHKYPGTSIVFDMSLTYILVAL 66
L+EPVP+DRYHAIYFAMLL+GVGFLLPYNSFITDVDYLHHKYPGTSIVFDMSLTYILVAL
Sbjct: 58 LDEPVPDDRYHAIYFAMLLAGVGFLLPYNSFITDVDYLHHKYPGTSIVFDMSLTYILVAL 117
Query: 67 AAVLLNNVLVERLTLHTRITA 87
AAVLLNNVLVERLTLHTRITA
Sbjct: 118 AAVLLNNVLVERLTLHTRITA 138
>gi|100913032 solute carrier family 29 (nucleoside transporters),
member 4 [Homo sapiens]
Length = 530
Score = 160 bits (404), Expect = 3e-40
Identities = 78/81 (96%), Positives = 81/81 (100%)
Query: 7 LEEPVPNDRYHAIYFAMLLSGVGFLLPYNSFITDVDYLHHKYPGTSIVFDMSLTYILVAL 66
L+EPVP+DRYHAIYFAMLL+GVGFLLPYNSFITDVDYLHHKYPGTSIVFDMSLTYILVAL
Sbjct: 58 LDEPVPDDRYHAIYFAMLLAGVGFLLPYNSFITDVDYLHHKYPGTSIVFDMSLTYILVAL 117
Query: 67 AAVLLNNVLVERLTLHTRITA 87
AAVLLNNVLVERLTLHTRITA
Sbjct: 118 AAVLLNNVLVERLTLHTRITA 138
>gi|148596922 solute carrier family 29 (nucleoside transporters),
member 3 [Homo sapiens]
Length = 475
Score = 40.4 bits (93), Expect = 4e-04
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 16/93 (17%)
Query: 12 PNDRYHAIYFAMLLSGVGFLLPYNSFITDVDYLHHKY-----------PGTSIVFDMSLT 60
P DR+ Y G+G LLP+N FIT +Y K P S + + +
Sbjct: 46 PEDRFCGTYIIFFSLGIGSLLPWNFFITAKEYWMFKLRNSSSPATGEDPEGSDILNYFES 105
Query: 61 YILVA-----LAAVLLNNVLVERLTLHTRITAT 88
Y+ VA + ++ N +LV R+ +H R+ A+
Sbjct: 106 YLAVASTVPSMLCLVANFLLVNRVAVHIRVLAS 138
>gi|38708299 solute carrier family 29 (nucleoside transporters),
member 2 [Homo sapiens]
Length = 456
Score = 37.4 bits (85), Expect = 0.003
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 12 PNDRYHAIYFAMLLSGVGFLLPYNSFITDVDYLHHKYPG 50
P D YH + + + G+G LLP+N FIT + Y + G
Sbjct: 7 PRDSYHLVGISFFILGLGTLLPWNFFITAIPYFQARLAG 45
>gi|118582267 equilibrative nucleoside transporter 1 [Homo
sapiens]
Length = 456
Score = 36.2 bits (82), Expect = 0.007
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 12 PNDRYHAIYFAMLLSGVGFLLPYNSFITDVDYLHHK 47
P DRY A++ + G+G LLP+N F+T Y ++
Sbjct: 7 PQDRYKAVWLIFFMLGLGTLLPWNFFMTATQYFTNR 42
>gi|118582265 equilibrative nucleoside transporter 1 [Homo
sapiens]
Length = 456
Score = 36.2 bits (82), Expect = 0.007
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 12 PNDRYHAIYFAMLLSGVGFLLPYNSFITDVDYLHHK 47
P DRY A++ + G+G LLP+N F+T Y ++
Sbjct: 7 PQDRYKAVWLIFFMLGLGTLLPWNFFMTATQYFTNR 42
>gi|118582262 equilibrative nucleoside transporter 1 [Homo
sapiens]
Length = 456
Score = 36.2 bits (82), Expect = 0.007
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 12 PNDRYHAIYFAMLLSGVGFLLPYNSFITDVDYLHHK 47
P DRY A++ + G+G LLP+N F+T Y ++
Sbjct: 7 PQDRYKAVWLIFFMLGLGTLLPWNFFMTATQYFTNR 42
>gi|118582260 equilibrative nucleoside transporter 1 [Homo
sapiens]
Length = 456
Score = 36.2 bits (82), Expect = 0.007
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 12 PNDRYHAIYFAMLLSGVGFLLPYNSFITDVDYLHHK 47
P DRY A++ + G+G LLP+N F+T Y ++
Sbjct: 7 PQDRYKAVWLIFFMLGLGTLLPWNFFMTATQYFTNR 42
>gi|4826716 equilibrative nucleoside transporter 1 [Homo sapiens]
Length = 456
Score = 36.2 bits (82), Expect = 0.007
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 12 PNDRYHAIYFAMLLSGVGFLLPYNSFITDVDYLHHK 47
P DRY A++ + G+G LLP+N F+T Y ++
Sbjct: 7 PQDRYKAVWLIFFMLGLGTLLPWNFFMTATQYFTNR 42
>gi|134031945 SCO-spondin [Homo sapiens]
Length = 5147
Score = 30.4 bits (67), Expect = 0.40
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 102 PTPSTWLLWAPWPSAAQVNPGG 123
P PS W LWAPW + + GG
Sbjct: 2828 PVPSIWGLWAPWSTCSAPCDGG 2849
Score = 27.3 bits (59), Expect = 3.4
Identities = 13/28 (46%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
Query: 99 GTRPTPSTWLLWAPWPSAAQVNPGGGVR 126
G P W LW PW S QV GG R
Sbjct: 4610 GACPDSCQWSLWGPW-SPCQVPCSGGFR 4636
Score = 26.6 bits (57), Expect = 5.8
Identities = 10/23 (43%), Positives = 12/23 (52%), Gaps = 1/23 (4%)
Query: 102 PTPSTWLLWAPWPSAAQVNPGGG 124
P P W W PW + V+ GGG
Sbjct: 3643 PDPGVWSSWGPWEDCS-VSCGGG 3664
>gi|239754544 PREDICTED: hypothetical protein [Homo sapiens]
Length = 201
Score = 29.6 bits (65), Expect = 0.69
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 95 SSSLGTRPTPSTWLLWAPWPSAAQVNPGGGVRQ 127
S+S T +T W P P Q++PGGGV Q
Sbjct: 88 STSADYTKTNNTEGSWVPMPGGPQLSPGGGVGQ 120
>gi|239749109 PREDICTED: hypothetical protein XP_002346915 [Homo
sapiens]
Length = 201
Score = 29.6 bits (65), Expect = 0.69
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 95 SSSLGTRPTPSTWLLWAPWPSAAQVNPGGGVRQ 127
S+S T +T W P P Q++PGGGV Q
Sbjct: 88 STSADYTKTNNTEGSWVPMPGGPQLSPGGGVGQ 120
>gi|239743138 PREDICTED: hypothetical protein XP_002342745 [Homo
sapiens]
Length = 201
Score = 29.6 bits (65), Expect = 0.69
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 95 SSSLGTRPTPSTWLLWAPWPSAAQVNPGGGVRQ 127
S+S T +T W P P Q++PGGGV Q
Sbjct: 88 STSADYTKTNNTEGSWVPMPGGPQLSPGGGVGQ 120
>gi|239508796 PREDICTED: hypothetical protein [Homo sapiens]
Length = 201
Score = 29.6 bits (65), Expect = 0.69
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 95 SSSLGTRPTPSTWLLWAPWPSAAQVNPGGGVRQ 127
S+S T +T W P P Q++PGGGV Q
Sbjct: 88 STSADYTKTNNTEGSWVPMPGGPQLSPGGGVGQ 120
>gi|118572606 hemicentin 1 [Homo sapiens]
Length = 5635
Score = 28.9 bits (63), Expect = 1.2
Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Query: 102 PTPSTWLLWAPWPSAAQVNPGGGVRQ 127
P W WA W SA V+ GGG RQ
Sbjct: 4698 PIHGKWATWASW-SACSVSCGGGARQ 4722
>gi|39653317 jumonji domain containing 2D [Homo sapiens]
Length = 523
Score = 28.9 bits (63), Expect = 1.2
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 96 SSLGTRPTPSTWLLWAPWPSAAQ 118
++LG R PS W +PWP AA+
Sbjct: 370 AALGLRQLPSHWARHSPWPMAAR 392
>gi|161019170 mucin 5AC [Homo sapiens]
Length = 6207
Score = 28.5 bits (62), Expect = 1.5
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 74 VLVERLTLHTRITATSVTCGCSSSLGTRPTPSTWLLWAPWPSA 116
+L E T+ T + T T SS+LGT TP A P+A
Sbjct: 5169 ILTEPSTIATVMVPTGSTATASSTLGTAHTPKVVTTMATMPTA 5211
Score = 28.1 bits (61), Expect = 2.0
Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
Query: 74 VLVERLTLHTRITATSVTCGCSSSLGTRPTPSTWLLWAPWPSAAQVNPGGGVRQAS 129
+L E T T AT T SS+ GT TW+L P A + P G AS
Sbjct: 5140 ILTELTTTATTTAATGSTATLSSTPGT-----TWILTEPSTIATVMVPTGSTATAS 5190
Score = 27.3 bits (59), Expect = 3.4
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 8/52 (15%)
Query: 83 TRITATSVTCGCSSSLGTRPTPS-----TWLLWAPWPSAAQVNPGGGVRQAS 129
T++T T+ T + S G+ TPS TW+L P +A P G AS
Sbjct: 4222 TKLTTTATT---TESTGSTATPSSTPGTTWILTEPSTTATVTVPTGSTATAS 4270
Score = 26.9 bits (58), Expect = 4.5
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 8/52 (15%)
Query: 83 TRITATSVTCGCSSSLGTRPTPS-----TWLLWAPWPSAAQVNPGGGVRQAS 129
T +T T+ T ++S G+ TPS TW+L P +A P G AS
Sbjct: 4895 TELTTTATT---TASTGSTATPSSTPGTTWILTEPSTTATVTVPTGSTATAS 4943
Score = 26.6 bits (57), Expect = 5.8
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 8/52 (15%)
Query: 83 TRITATSVTCGCSSSLGTRPTPS-----TWLLWAPWPSAAQVNPGGGVRQAS 129
T +T T+ T + S G+ TPS TW+L P +A P G AS
Sbjct: 3075 TELTTTATT---TESTGSTATPSSTPGTTWILTEPSTTATVTVPTGSTATAS 3123
Score = 25.8 bits (55), Expect = 9.9
Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 6/48 (12%)
Query: 80 TLHTRITATSVTCGC----SSSLGTRPTPSTWL--LWAPWPSAAQVNP 121
T HT T+ T G SSS GT TP W+ P S + V P
Sbjct: 4387 TAHTTKVPTTTTTGFTVTPSSSPGTARTPPVWISTTTTPTTSGSTVTP 4434
>gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens]
Length = 5765
Score = 28.5 bits (62), Expect = 1.5
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 74 VLVERLTLHTRITATSVTCGCSSSLGTRPTPSTWLLWAPWPSA 116
+L E T+ T + T T SS+LGT TP A P+A
Sbjct: 4850 ILTEPSTIATVMVPTGSTATASSTLGTAHTPKVVTTMATMPTA 4892
Score = 28.1 bits (61), Expect = 2.0
Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
Query: 74 VLVERLTLHTRITATSVTCGCSSSLGTRPTPSTWLLWAPWPSAAQVNPGGGVRQAS 129
+L E T T AT T SS+ GT TW+L P A + P G AS
Sbjct: 4821 ILTELTTTATTTAATGSTATLSSTPGT-----TWILTEPSTIATVMVPTGSTATAS 4871
Score = 27.7 bits (60), Expect = 2.6
Identities = 16/38 (42%), Positives = 19/38 (50%)
Query: 79 LTLHTRITATSVTCGCSSSLGTRPTPSTWLLWAPWPSA 116
+T T ITAT T SS+ GT P P A P+A
Sbjct: 3951 ITTATTITATGSTTNPSSTPGTTPIPPVLTTTATTPAA 3988
Score = 27.3 bits (59), Expect = 3.4
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 8/52 (15%)
Query: 83 TRITATSVTCGCSSSLGTRPTPS-----TWLLWAPWPSAAQVNPGGGVRQAS 129
T++T T+ T + S G+ TPS TW+L P +A P G AS
Sbjct: 3697 TKLTTTATT---TESTGSTATPSSTPGTTWILTEPSTTATVTVPTGSTATAS 3745
Score = 26.9 bits (58), Expect = 4.5
Identities = 16/37 (43%), Positives = 18/37 (48%)
Query: 80 TLHTRITATSVTCGCSSSLGTRPTPSTWLLWAPWPSA 116
T T ITAT T SS+ GT P P A P+A
Sbjct: 2138 TTATTITATGSTTNPSSTPGTTPIPPVLTTTATTPAA 2174
Score = 26.9 bits (58), Expect = 4.5
Identities = 16/37 (43%), Positives = 18/37 (48%)
Query: 80 TLHTRITATSVTCGCSSSLGTRPTPSTWLLWAPWPSA 116
T T ITAT T SS+ GT P P A P+A
Sbjct: 2695 TTATTITATGSTTNPSSTPGTTPIPPVLTTTATTPAA 2731
Score = 26.9 bits (58), Expect = 4.5
Identities = 16/37 (43%), Positives = 18/37 (48%)
Query: 80 TLHTRITATSVTCGCSSSLGTRPTPSTWLLWAPWPSA 116
T T ITAT T SS+ GT P P A P+A
Sbjct: 3395 TTATTITATGSTTNPSSTPGTTPIPPVLTTTATTPAA 3431
Score = 26.9 bits (58), Expect = 4.5
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 8/52 (15%)
Query: 83 TRITATSVTCGCSSSLGTRPTPS-----TWLLWAPWPSAAQVNPGGGVRQAS 129
T +T T+ T ++S G+ TPS TW+L P +A P G AS
Sbjct: 4425 TELTTTATT---TASTGSTATPSSTPGTTWILTEPSTTATVTVPTGSTATAS 4473
Score = 26.6 bits (57), Expect = 5.8
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 8/52 (15%)
Query: 83 TRITATSVTCGCSSSLGTRPTPS-----TWLLWAPWPSAAQVNPGGGVRQAS 129
T +T T+ T + S G+ TPS TW+L P +A P G AS
Sbjct: 2440 TELTTTATT---TESTGSTATPSSTPGTTWILTEPSTTATVTVPTGSTATAS 2488
Score = 25.8 bits (55), Expect = 9.9
Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 6/48 (12%)
Query: 80 TLHTRITATSVTCGC----SSSLGTRPTPSTWL--LWAPWPSAAQVNP 121
T HT T+ T G SSS GT TP W+ P S + V P
Sbjct: 3862 TAHTTKVPTTTTTGFTVTPSSSPGTARTPPVWISTTTTPTTSGSTVTP 3909
>gi|94536854 thrombospondin, type I, domain containing 4 [Homo
sapiens]
Length = 1018
Score = 28.1 bits (61), Expect = 2.0
Identities = 12/48 (25%), Positives = 18/48 (37%)
Query: 80 TLHTRITATSVTCGCSSSLGTRPTPSTWLLWAPWPSAAQVNPGGGVRQ 127
T H ++ G G P W W PW + ++ GG + Q
Sbjct: 29 TQHRKVPQRMAAEGAPEDDGGGGAPGVWGAWGPWSACSRSCSGGVMEQ 76
>gi|51093381 leptin receptor isoform 3 [Homo sapiens]
Length = 958
Score = 27.7 bits (60), Expect = 2.6
Identities = 14/69 (20%), Positives = 34/69 (49%)
Query: 11 VPNDRYHAIYFAMLLSGVGFLLPYNSFITDVDYLHHKYPGTSIVFDMSLTYILVALAAVL 70
+P ++Y + + + GVG NSF D H G ++ + ++ ++ L +L
Sbjct: 802 IPIEKYQFSLYPIFMEGVGKPKIINSFTQDDIEKHQSDAGLYVIVPVIISSSILLLGTLL 861
Query: 71 LNNVLVERL 79
+++ +++L
Sbjct: 862 ISHQRMKKL 870
>gi|51093379 leptin receptor isoform 2 [Homo sapiens]
Length = 896
Score = 27.7 bits (60), Expect = 2.6
Identities = 14/69 (20%), Positives = 34/69 (49%)
Query: 11 VPNDRYHAIYFAMLLSGVGFLLPYNSFITDVDYLHHKYPGTSIVFDMSLTYILVALAAVL 70
+P ++Y + + + GVG NSF D H G ++ + ++ ++ L +L
Sbjct: 802 IPIEKYQFSLYPIFMEGVGKPKIINSFTQDDIEKHQSDAGLYVIVPVIISSSILLLGTLL 861
Query: 71 LNNVLVERL 79
+++ +++L
Sbjct: 862 ISHQRMKKL 870
>gi|40254464 leptin receptor isoform 1 [Homo sapiens]
Length = 1165
Score = 27.7 bits (60), Expect = 2.6
Identities = 14/69 (20%), Positives = 34/69 (49%)
Query: 11 VPNDRYHAIYFAMLLSGVGFLLPYNSFITDVDYLHHKYPGTSIVFDMSLTYILVALAAVL 70
+P ++Y + + + GVG NSF D H G ++ + ++ ++ L +L
Sbjct: 802 IPIEKYQFSLYPIFMEGVGKPKIINSFTQDDIEKHQSDAGLYVIVPVIISSSILLLGTLL 861
Query: 71 LNNVLVERL 79
+++ +++L
Sbjct: 862 ISHQRMKKL 870
>gi|40806187 ADAM metallopeptidase with thrombospondin type 1 motif,
18 preproprotein [Homo sapiens]
Length = 1221
Score = 26.9 bits (58), Expect = 4.5
Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Query: 92 CGCSSSLGTRPTPSTWLLWAPWPSAAQVNPGGGVR 126
C LG RP W W+ W ++ GGGV+
Sbjct: 577 CVKFGELGPRPIHGQWSAWSKWSECSR-TCGGGVK 610
>gi|40317628 thrombospondin 2 precursor [Homo sapiens]
Length = 1172
Score = 26.9 bits (58), Expect = 4.5
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Query: 102 PTPSTWLLWAPWPSAAQVNPGGGVRQ 127
P W W+PW SA V GG+R+
Sbjct: 492 PIDGRWSPWSPW-SACTVTCAGGIRE 516
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.135 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,341,243
Number of Sequences: 37866
Number of extensions: 206096
Number of successful extensions: 609
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 516
Number of HSP's gapped (non-prelim): 103
length of query: 129
length of database: 18,247,518
effective HSP length: 90
effective length of query: 39
effective length of database: 14,839,578
effective search space: 578743542
effective search space used: 578743542
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.